
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147963.2 - phase: 0
(129 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
MPR_BACSU (P39790) Extracellular metalloprotease precursor (EC 3... 30 1.2
METK_METKA (Q8TV85) S-adenosylmethionine synthetase (EC 2.5.1.6)... 29 1.6
YA95_PORGI (Q7MVG9) Hypothetical RNA methyltransferase PG1095 (E... 29 2.1
Y188_CLOPE (P26832) Hypothetical protein CPE0188 28 2.7
Y123_TREPA (O83160) Hypothetical protein TP0123 28 2.7
N192_YEAST (P47054) Nucleoporin NUP192 (Nuclear pore protein NUP... 28 2.7
TOM1_YEAST (Q03280) E3 ubiquitin protein ligase TOM1 (EC 6.3.2.-... 28 3.6
SSRP_AQUAE (O66640) SsrA-binding protein 28 3.6
PLEC_CAUCR (P37894) Non-motile and phage-resistance protein (EC ... 28 3.6
MTA3_MOUSE (Q924K8) Metastasis associated protein MTA3 28 3.6
CHLN_ANTFO (Q85A72) Light-independent protochlorophyllide reduct... 28 3.6
APCE_SYNY4 (Q02907) Phycobilisome 100.5 kDa core-membrane linker... 28 3.6
TFB1_SULSO (P58111) Transcription initiation factor IIB 1 (TFIIB 1) 28 4.6
TF2B_SULSH (P50387) Transcription initiation factor IIB (TFIIB) 28 4.6
SMA2_BRARE (Q9I9P9) Mothers against decapentaplegic homolog 2 (S... 28 4.6
MURA_VIBCH (Q9KP62) UDP-N-acetylglucosamine 1-carboxyvinyltransf... 28 4.6
MTA3_HUMAN (Q9BTC8) Metastasis associated protein MTA3 28 4.6
MND2_YEAST (P40577) Anaphase promoting complex subunit MND2 (Mei... 28 4.6
MASY_PICAN (P21360) Malate synthase, glyoxysomal (EC 2.3.3.9) 28 4.6
SPRC_HUMAN (P09486) SPARC precursor (Secreted protein acidic and... 27 6.1
>MPR_BACSU (P39790) Extracellular metalloprotease precursor (EC
3.4.21.-)
Length = 313
Score = 29.6 bits (65), Expect = 1.2
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 8/55 (14%)
Query: 5 ILTPNTTYVVYLITKVSHRVYGLDSAPAEVSVAMANKVQNGMAYLYNKYEDTMFY 59
++ PNT + H VY D A A + NG +Y Y Y TMFY
Sbjct: 135 LVNPNT------VVTAGHCVYSQDHGWASTITAAPGR--NGSSYPYGTYSGTMFY 181
>METK_METKA (Q8TV85) S-adenosylmethionine synthetase (EC 2.5.1.6)
(Methionine adenosyltransferase) (AdoMet synthetase)
Length = 397
Score = 29.3 bits (64), Expect = 1.6
Identities = 20/81 (24%), Positives = 40/81 (48%), Gaps = 6/81 (7%)
Query: 36 VAMANKVQNGMAYLYNKYEDTMFYENHRKMERNKLMED----NKEIRVPSKRDDGWMEIE 91
V +AN G+ Y + + YE RK+ KL +D ++++V + R+D +E+
Sbjct: 152 VPLANDTSFGVGYAPLTTTERLVYETERKINSPKLKKDLPEVGEDVKVMALREDNKIELT 211
Query: 92 LGEFFCGE--VDMEVKMSVME 110
+ + D++ +SV+E
Sbjct: 212 VAAAMVSQRIDDIDHYISVVE 232
>YA95_PORGI (Q7MVG9) Hypothetical RNA methyltransferase PG1095 (EC
2.1.1.-)
Length = 465
Score = 28.9 bits (63), Expect = 2.1
Identities = 16/59 (27%), Positives = 26/59 (43%), Gaps = 7/59 (11%)
Query: 6 LTPNTTYVVYLITKVSHRVYGLDSAPAEVSVAMANKVQNGMAYLYNKYEDTMFYENHRK 64
L T + + +HRV G++ P + A N + NG+ E+T+FY K
Sbjct: 321 LYTGTGTIANFVAGQAHRVIGIEYVPEAIEDARTNSLLNGI-------ENTLFYAGDMK 372
>Y188_CLOPE (P26832) Hypothetical protein CPE0188
Length = 295
Score = 28.5 bits (62), Expect = 2.7
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 61 NHRKMERNKLMEDNKEIRVPSKRDDGWMEIELGEFFCGEVDMEVKMSVMEVGYRLKGGLI 120
N+ +E K++E+ E +P ++ LGEFF G M+ + +G + G LI
Sbjct: 86 NYTGVEVKKILEE--EFNLPCFVENDVNCAALGEFFGGAGKGTHSMACLTIGTGIGGALI 143
Query: 121 VEG 123
++G
Sbjct: 144 IDG 146
>Y123_TREPA (O83160) Hypothetical protein TP0123
Length = 856
Score = 28.5 bits (62), Expect = 2.7
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 8 PNTTYVVYLITKVSHRVYGLDSAPAEVSVAMANKV-QNGMAYLYNKYEDTMFYENH 62
P+ +YL VS+RV+G ++A ++ A KV Q +AY+ F +++
Sbjct: 785 PSAALFLYLCYDVSYRVHGAEAAVTTAHLSRAFKVMQRSVAYMSENTVRAQFMQDN 840
>N192_YEAST (P47054) Nucleoporin NUP192 (Nuclear pore protein NUP192)
Length = 1683
Score = 28.5 bits (62), Expect = 2.7
Identities = 29/98 (29%), Positives = 37/98 (37%), Gaps = 3/98 (3%)
Query: 6 LTPNTTYVVYLITKVSHRVYGLDSAPAEVSVAMANKVQNGMAYLYNKYEDTMFYENHRKM 65
L NT Y V L + + YG P E N N NKY Y+ H KM
Sbjct: 1184 LISNTMYSVRLFSFLDPLNYGNICEPKETLSIFTNVPLNLEQVTLNKYCSGNIYDFH-KM 1242
Query: 66 ERNKLMEDNKEIRVPSKRDDGWMEIELGEFFCGEVDME 103
E LM K +R S + + E F + D+E
Sbjct: 1243 E--NLMRLIKRVRAESLHSNSFSLTVSKEQFLKDADVE 1278
>TOM1_YEAST (Q03280) E3 ubiquitin protein ligase TOM1 (EC 6.3.2.-)
(Temperature dependent-organization in mitotic nucleus
protein 1) (Suppressor of snRNA protein 2)
Length = 3268
Score = 28.1 bits (61), Expect = 3.6
Identities = 20/87 (22%), Positives = 43/87 (48%), Gaps = 5/87 (5%)
Query: 41 KVQNGMAYLYNKYEDTMFYENHRKMERNKLMEDNKE---IRVPSKRDDGWMEIELGEFFC 97
K+ +G L K + ++N R KL DN+E + + +R+ +++ FF
Sbjct: 2872 KLMSGPFALLVKNPKVLDFDNKRYFFNAKLKSDNQERPKLPITVRREQVFLDSYRALFF- 2930
Query: 98 GEVDMEVKMSVMEVGYRLKGGLIVEGI 124
+ + E+K S +E+ ++ + G+ G+
Sbjct: 2931 -KTNDEIKNSKLEITFKGESGVDAGGV 2956
>SSRP_AQUAE (O66640) SsrA-binding protein
Length = 157
Score = 28.1 bits (61), Expect = 3.6
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 41 KVQNGMAYLYNKYEDTMFY---ENHRKMERNKLMEDNKEI 77
+++NG A+LYN Y + ENH + + KL+ +EI
Sbjct: 54 RIENGEAWLYNLYIAPYKHATIENHDPLRKRKLLLHKREI 93
>PLEC_CAUCR (P37894) Non-motile and phage-resistance protein (EC
2.7.3.-)
Length = 842
Score = 28.1 bits (61), Expect = 3.6
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 35 SVAMANKVQNGMAYLYNKYE-DTMFYENHRKMERNKLMEDNKEIRVPSKRDDGWMEIELG 93
+VA + Q +A L KYE + + E+ K + L + E+R P +G+ EI +
Sbjct: 569 AVAGLERSQEQLAELARKYETEKVKAESANKAKSEFLANMSHELRTPLNAINGFSEIMMN 628
Query: 94 EFF 96
E F
Sbjct: 629 EMF 631
>MTA3_MOUSE (Q924K8) Metastasis associated protein MTA3
Length = 591
Score = 28.1 bits (61), Expect = 3.6
Identities = 18/48 (37%), Positives = 25/48 (51%), Gaps = 2/48 (4%)
Query: 35 SVAMANKVQNGMAYLYNKYEDTMFYENHRKMERNKLMEDNKEIRVPSK 82
SVA+ N+ ++ ++YL EDT FY L+ D EIRV K
Sbjct: 110 SVALLNETESVLSYLDK--EDTFFYSLVYDPSVKTLLADKGEIRVGPK 155
>CHLN_ANTFO (Q85A72) Light-independent protochlorophyllide reductase
subunit N (EC 1.18.-.-) (LI-POR subunit N) (DPOR subunit
N)
Length = 471
Score = 28.1 bits (61), Expect = 3.6
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 33 EVSVAMANKVQNGMAYLYNKYEDTMFYE-NHRKMERNKLMEDNKEIR 78
E+ V + NG+ Y + + EDT+ HR ER+ L+++NK I+
Sbjct: 126 ELGVPIVVARANGLDYAFTQGEDTVLAAMAHRCPERDLLIDENKVIQ 172
>APCE_SYNY4 (Q02907) Phycobilisome 100.5 kDa core-membrane linker
polypeptide (L-CM 100.5) (Anchor polypeptide)
Length = 896
Score = 28.1 bits (61), Expect = 3.6
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 10/55 (18%)
Query: 37 AMANKVQNGMAYLYNKYEDTMFYE--------NHRKMER--NKLMEDNKEIRVPS 81
A + NGM YL EDT+ Y N ER NKL + +KE+ VPS
Sbjct: 833 AFIGAMVNGMEYLQTFGEDTVPYRRFPTLPAANFPNTERLYNKLTKQDKELVVPS 887
>TFB1_SULSO (P58111) Transcription initiation factor IIB 1 (TFIIB 1)
Length = 309
Score = 27.7 bits (60), Expect = 4.6
Identities = 12/43 (27%), Positives = 21/43 (47%)
Query: 70 LMEDNKEIRVPSKRDDGWMEIELGEFFCGEVDMEVKMSVMEVG 112
L E+NK + P D + E GE+ C E ++ +++ G
Sbjct: 4 LSEENKSVSTPCPPDKIIFDAERGEYICSETGEVLEDKIIDQG 46
>TF2B_SULSH (P50387) Transcription initiation factor IIB (TFIIB)
Length = 309
Score = 27.7 bits (60), Expect = 4.6
Identities = 12/43 (27%), Positives = 21/43 (47%)
Query: 70 LMEDNKEIRVPSKRDDGWMEIELGEFFCGEVDMEVKMSVMEVG 112
L E+NK + P D + E GE+ C E ++ +++ G
Sbjct: 4 LSEENKSVSTPCPPDKIIFDAERGEYICSETGEVLEDKIIDQG 46
>SMA2_BRARE (Q9I9P9) Mothers against decapentaplegic homolog 2 (SMAD
2) (Mothers against DPP homolog 2) (Smad2)
Length = 468
Score = 27.7 bits (60), Expect = 4.6
Identities = 18/68 (26%), Positives = 31/68 (45%)
Query: 30 APAEVSVAMANKVQNGMAYLYNKYEDTMFYENHRKMERNKLMEDNKEIRVPSKRDDGWME 89
+PAE+S + + V +GM Y + F+ + E N+ + + PS DG+ +
Sbjct: 246 SPAELSPSTLSPVNHGMDLQPVTYSEPAFWCSIAYYELNQRVGETFHASQPSLTVDGFTD 305
Query: 90 IELGEFFC 97
E FC
Sbjct: 306 PSNSERFC 313
>MURA_VIBCH (Q9KP62) UDP-N-acetylglucosamine
1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate
transferase) (UDP-N-acetylglucosamine enolpyruvyl
transferase) (EPT)
Length = 419
Score = 27.7 bits (60), Expect = 4.6
Identities = 17/52 (32%), Positives = 23/52 (43%), Gaps = 1/52 (1%)
Query: 73 DNKEIRVPS-KRDDGWMEIELGEFFCGEVDMEVKMSVMEVGYRLKGGLIVEG 123
+N+ + VP KR EIE CG+VD VM R L++ G
Sbjct: 330 ENRFMHVPELKRMGAKAEIEGNTVICGDVDRLSGAQVMATDLRASASLVIAG 381
>MTA3_HUMAN (Q9BTC8) Metastasis associated protein MTA3
Length = 594
Score = 27.7 bits (60), Expect = 4.6
Identities = 17/45 (37%), Positives = 24/45 (52%), Gaps = 2/45 (4%)
Query: 35 SVAMANKVQNGMAYLYNKYEDTMFYENHRKMERNKLMEDNKEIRV 79
SVA+ N+ ++ ++YL EDT FY L+ D EIRV
Sbjct: 110 SVALLNETESVLSYLDK--EDTFFYSLVYDPSLKTLLADKGEIRV 152
>MND2_YEAST (P40577) Anaphase promoting complex subunit MND2
(Meiotic nuclear division protein 2)
Length = 368
Score = 27.7 bits (60), Expect = 4.6
Identities = 22/83 (26%), Positives = 32/83 (38%), Gaps = 6/83 (7%)
Query: 4 HILTPNTTYVVYLITKVSHRVYGLDSAPAEVSVAMANKVQNGMAYLYNKYEDTMFYENHR 63
HIL N Y V GL S P + +AN N ED + Y+
Sbjct: 174 HILQENEEY------DTGEGVTGLHSMPNDSMAILANNSANNSQNEEVSEEDEISYDYDA 227
Query: 64 KMERNKLMEDNKEIRVPSKRDDG 86
+ + +DN+E VP + +G
Sbjct: 228 EFDHVVDEDDNEEGEVPGEGVEG 250
>MASY_PICAN (P21360) Malate synthase, glyoxysomal (EC 2.3.3.9)
Length = 555
Score = 27.7 bits (60), Expect = 4.6
Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Query: 40 NKVQNGMAYLYNKYEDTMFYENHRKMERNKLMEDNKEIRVPSKRDDGWMEIELGEFFCGE 99
N + G LY+ D + + N +R K+ + + + V R GW ++ GE
Sbjct: 136 NNMIYGQVNLYDAIRDRIDFTNEATGKRYKINREGRRVPVMIVRPRGWHMVDKHILVDGE 195
Query: 100 VDMEVKMSVMEVG 112
+ S+M+ G
Sbjct: 196 ---PISASIMDFG 205
>SPRC_HUMAN (P09486) SPARC precursor (Secreted protein acidic and
rich in cysteine) (Osteonectin) (ON) (Basement membrane
protein BM-40)
Length = 303
Score = 27.3 bits (59), Expect = 6.1
Identities = 14/51 (27%), Positives = 25/51 (48%)
Query: 27 LDSAPAEVSVAMANKVQNGMAYLYNKYEDTMFYENHRKMERNKLMEDNKEI 77
LDS E + M + ++N + LY + ED +K+ K+ E+ K +
Sbjct: 156 LDSELTEFPLRMRDWLKNVLVTLYERDEDNNLLTEKQKLRVKKIHENEKRL 206
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.318 0.136 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,835,015
Number of Sequences: 164201
Number of extensions: 563130
Number of successful extensions: 1395
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 1387
Number of HSP's gapped (non-prelim): 31
length of query: 129
length of database: 59,974,054
effective HSP length: 105
effective length of query: 24
effective length of database: 42,732,949
effective search space: 1025590776
effective search space used: 1025590776
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Medicago: description of AC147963.2