BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC147961.1 - phase: 0 
         (46 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

MM02_CHICK (Q90611) 72 kDa type IV collagenase precursor (EC 3.4...    28  3.6
Y396_THEAC (Q03021) Hypothetical protein Ta0396                        28  6.1

>MM02_CHICK (Q90611) 72 kDa type IV collagenase precursor (EC
          3.4.24.24) (72 kDa gelatinase) (Matrix
          metalloproteinase-2) (MMP-2) (Gelatinase A)
          Length = 663

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 13/19 (68%), Positives = 15/19 (78%)

Query: 19 FKVLLIYSYIFTKTNASPS 37
          FKVLLI  Y+F KT A+PS
Sbjct: 11 FKVLLIQVYLFNKTLAAPS 29


>Y396_THEAC (Q03021) Hypothetical protein Ta0396
          Length = 186

 Score = 27.7 bits (60), Expect = 6.1
 Identities = 11/23 (47%), Positives = 17/23 (73%)

Query: 14 EPLGSFKVLLIYSYIFTKTNASP 36
          +P+G FK +L+ SYI TK+  +P
Sbjct: 71 KPIGFFKNILVMSYIGTKSGPAP 93


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.322    0.137    0.445 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,123,891
Number of Sequences: 164201
Number of extensions: 122827
Number of successful extensions: 187
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 185
Number of HSP's gapped (non-prelim): 2
length of query: 46
length of database: 59,974,054
effective HSP length: 22
effective length of query: 24
effective length of database: 56,361,632
effective search space: 1352679168
effective search space used: 1352679168
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)