BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147741.8 - phase: 0
(402 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SCA4_RICPR (Q9ZD49) Antigenic heat-stable 120 kDa protein (PS120... 33 1.7
GUAA_PROMM (Q7V9A9) GMP synthase [glutamine-hydrolyzing] (EC 6.3... 33 1.7
GUAA_DESVH (Q72D86) GMP synthase [glutamine-hydrolyzing] (EC 6.3... 33 1.7
CSLB_PEDHE (Q46079) Chondroitinase B precursor (EC 4.2.2.-) (Cho... 32 2.2
GUAA_PROMA (Q7VEH5) GMP synthase [glutamine-hydrolyzing] (EC 6.3... 32 2.9
GUAA_PROMP (Q7V3N7) GMP synthase [glutamine-hydrolyzing] (EC 6.3... 32 3.8
R1AB_CVMA5 (P16342) Replicase polyprotein 1ab (pp1ab) (ORF1ab po... 31 4.9
GUAA_SYNPX (Q7UA53) GMP synthase [glutamine-hydrolyzing] (EC 6.3... 31 4.9
GUAA_STRCO (Q9L0H2) GMP synthase [glutamine-hydrolyzing] (EC 6.3... 31 4.9
Y414_MYCGE (P47653) Hypothetical protein MG414 31 6.4
CNG9_ARATH (Q9M0A4) Putative cyclic nucleotide-gated ion channel... 31 6.4
GYRA_AQUAE (O67108) DNA gyrase subunit A (EC 5.99.1.3) 30 8.4
GUAA_RHOBA (Q7UFS3) GMP synthase [glutamine-hydrolyzing] (EC 6.3... 30 8.4
GUAA_PYRAE (Q8ZT92) GMP synthase [glutamine-hydrolyzing] (EC 6.3... 30 8.4
GUAA_LISMO (Q8Y822) GMP synthase [glutamine-hydrolyzing] (EC 6.3... 30 8.4
GUAA_LISMF (Q720X7) GMP synthase [glutamine-hydrolyzing] (EC 6.3... 30 8.4
GUAA_LISIN (Q92CU0) GMP synthase [glutamine-hydrolyzing] (EC 6.3... 30 8.4
>SCA4_RICPR (Q9ZD49) Antigenic heat-stable 120 kDa protein (PS120)
(120 kDa antigen) (Protein PS 120)
Length = 1022
Score = 32.7 bits (73), Expect = 1.7
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 215 KGQSYAVDKIGKTVVVGPDSSVQLVAEPLIGGGDMKFLVESEGDLL 260
K ++ V IGKT+V D+S+ L + +I G K +VES+ DLL
Sbjct: 685 KDKTEIVKGIGKTIVTHSDTSLPLHDKVVIMGSVAKGIVESKNDLL 730
>GUAA_PROMM (Q7V9A9) GMP synthase [glutamine-hydrolyzing] (EC
6.3.5.2) (Glutamine amidotransferase) (GMP synthetase)
Length = 528
Score = 32.7 bits (73), Expect = 1.7
Identities = 15/23 (65%), Positives = 16/23 (69%)
Query: 3 TVDWSKLPTELLNLISQRIYEEV 25
T DWS+LP ELL IS RI EV
Sbjct: 485 TADWSRLPHELLERISNRIVNEV 507
>GUAA_DESVH (Q72D86) GMP synthase [glutamine-hydrolyzing] (EC
6.3.5.2) (Glutamine amidotransferase) (GMP synthetase)
Length = 515
Score = 32.7 bits (73), Expect = 1.7
Identities = 14/23 (60%), Positives = 17/23 (73%)
Query: 3 TVDWSKLPTELLNLISQRIYEEV 25
T DW++LP+ELL IS RI EV
Sbjct: 472 TADWARLPSELLERISSRIINEV 494
>CSLB_PEDHE (Q46079) Chondroitinase B precursor (EC 4.2.2.-)
(Chondroitin B lyase) (Chondroitin sulfate B lyase)
(Chondroitin B eliminase)
Length = 506
Score = 32.3 bits (72), Expect = 2.2
Identities = 32/126 (25%), Positives = 53/126 (41%), Gaps = 17/126 (13%)
Query: 281 VRIDLFKLNEKEKKWVKLTSLGDRVLFLGLGLVCSFSACASDLCVAKGNSVIFNNYIFES 340
+ + F+L+E K S G+ L+L G + S A A D+ +A + N Y
Sbjct: 304 IACNYFELSETIK------SRGNAALYLNPGAMASEHALAFDMLIANNAFINVNGYAIH- 356
Query: 341 HRPLESECKEYV----LDLDLGRHSLLSDYPEYSNLFWPPPEWIRPRY-DVSYLASKGFY 395
PL+ KEY L + +L NLF+ ++ P + D ++A K +
Sbjct: 357 FNPLDERRKEYCAANRLKFETPHQLMLK-----GNLFFKDKPYVYPFFKDDYFIAGKNSW 411
Query: 396 FPNVTM 401
NV +
Sbjct: 412 TGNVAL 417
>GUAA_PROMA (Q7VEH5) GMP synthase [glutamine-hydrolyzing] (EC
6.3.5.2) (Glutamine amidotransferase) (GMP synthetase)
Length = 528
Score = 32.0 bits (71), Expect = 2.9
Identities = 14/24 (58%), Positives = 16/24 (66%)
Query: 3 TVDWSKLPTELLNLISQRIYEEVD 26
T DWS+LP LL IS RI EV+
Sbjct: 485 TADWSRLPNSLLEKISNRIVNEVN 508
>GUAA_PROMP (Q7V3N7) GMP synthase [glutamine-hydrolyzing] (EC
6.3.5.2) (Glutamine amidotransferase) (GMP synthetase)
Length = 528
Score = 31.6 bits (70), Expect = 3.8
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 3 TVDWSKLPTELLNLISQRIYEEVDLIH 29
T DWS++P E L IS RI EV+ ++
Sbjct: 485 TADWSRIPYETLERISNRIVNEVEQVN 511
>R1AB_CVMA5 (P16342) Replicase polyprotein 1ab (pp1ab) (ORF1ab
polyprotein) [Includes: Replicase polyprotein 1a (pp1a)
(ORF1a)] [Contains: p28; p65; p210 (EC 3.4.24.-)
(Papain-like proteinases 1/2) (PL1-PRO/PL2-PRO); Peptide
HD2 (p44); 3C-like proteinase
Length = 7176
Score = 31.2 bits (69), Expect = 4.9
Identities = 41/172 (23%), Positives = 63/172 (35%), Gaps = 7/172 (4%)
Query: 193 CGDEKWNVIPDMSTKFGDICLFKGQSYAVDKIGKTVVVGPDSSVQLVAEPLIGGGDMKFL 252
C +WN + S K G+ + + + K K V DS+ V E G M+
Sbjct: 2520 CTKHQWNCLNCNSWKPGNTFITHEAAADLSKELKRPVNPTDSAYYSVTEVKQVGCSMRLF 2579
Query: 253 VESEGDLLLADVYNCLFTDLCNPDHNDCVRIDLFKLNEKEKKWVKLTSLGDRVLFLGLGL 312
E +G + DV LF D+ H+ + E V + + D+ FLG +
Sbjct: 2580 YERDGQRVYDDVNASLFVDMNGLLHSKVKGV-------PETHVVVVENEADKAGFLGAAV 2632
Query: 313 VCSFSACASDLCVAKGNSVIFNNYIFESHRPLESECKEYVLDLDLGRHSLLS 364
+ S L V K N + S + + LD+ R SL S
Sbjct: 2633 FYAQSLYRPMLMVEKKLITTANTGLSVSRTMFDLYVDSLLNVLDVDRKSLTS 2684
>GUAA_SYNPX (Q7UA53) GMP synthase [glutamine-hydrolyzing] (EC
6.3.5.2) (Glutamine amidotransferase) (GMP synthetase)
Length = 528
Score = 31.2 bits (69), Expect = 4.9
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 3 TVDWSKLPTELLNLISQRIYEEV 25
T DWS+LP +L+ IS RI EV
Sbjct: 485 TADWSRLPYDLMETISNRIVNEV 507
>GUAA_STRCO (Q9L0H2) GMP synthase [glutamine-hydrolyzing] (EC
6.3.5.2) (Glutamine amidotransferase) (GMP synthetase)
Length = 526
Score = 31.2 bits (69), Expect = 4.9
Identities = 14/23 (60%), Positives = 17/23 (73%)
Query: 3 TVDWSKLPTELLNLISQRIYEEV 25
T DWS+LP E+L+ IS RI EV
Sbjct: 483 TADWSRLPYEVLSKISTRITNEV 505
>Y414_MYCGE (P47653) Hypothetical protein MG414
Length = 1036
Score = 30.8 bits (68), Expect = 6.4
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 19/139 (13%)
Query: 114 LLQNGYKFPHTFMLDFNKLSILHLGSNFFMIDFDFTFNDKLYNPDDYMYPKKVVVVTCHG 173
L++N +F F +D + G N F +++ K+ N + +++V +G
Sbjct: 884 LVENKNQFNLVFDVDVRSKKLFIKGVNNDNQVFSISYDLKITNN------QTLLIVDANG 937
Query: 174 KKPLIVGTLTSPPQPLLMKC-------GDEKWNVIPDMSTKFGDICLFKGQSYAVDKIGK 226
I +TS Q L K + ++ +PD + K D +SY VDK+ K
Sbjct: 938 FDNSIWFDITSENQTQLFKALSFYLKQNNLQFKRVPDFNLKSQD------KSYEVDKLEK 991
Query: 227 TVVVGPDSSVQLVAEPLIG 245
+ D++V+L+ + G
Sbjct: 992 NEIKKQDTNVELILWVIFG 1010
>CNG9_ARATH (Q9M0A4) Putative cyclic nucleotide-gated ion channel 9
(Cyclic nucleotide- and calmodulin-regulated ion channel
9)
Length = 733
Score = 30.8 bits (68), Expect = 6.4
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 259 LLLADVYNCLFTDLCNPDHNDCVRIDLFKLNEKEKKWVKLTSLGDRVLFL 308
LL + YN +T +C+ DC R LF NEK + T++ D VL L
Sbjct: 298 LLALERYNGCWTKVCSNSSLDCHRNFLFCGNEKMDGYAAWTTIKDSVLQL 347
>GYRA_AQUAE (O67108) DNA gyrase subunit A (EC 5.99.1.3)
Length = 744
Score = 30.4 bits (67), Expect = 8.4
Identities = 17/52 (32%), Positives = 26/52 (49%), Gaps = 2/52 (3%)
Query: 144 IDFDFTFNDKLYNPDDYMYPKKVVVVTCHGKKPLIVGTLTSPPQPLLMKCGD 195
+DF F+D L P+ + P K + C+G + VG TS P L + G+
Sbjct: 142 VDFQPNFDDTLMEPE--VLPSKFPNLLCNGTSGIAVGLATSIPPHNLTEVGN 191
>GUAA_RHOBA (Q7UFS3) GMP synthase [glutamine-hydrolyzing] (EC
6.3.5.2) (Glutamine amidotransferase) (GMP synthetase)
Length = 587
Score = 30.4 bits (67), Expect = 8.4
Identities = 15/23 (65%), Positives = 15/23 (65%)
Query: 3 TVDWSKLPTELLNLISQRIYEEV 25
T DWS LP ELL IS RI EV
Sbjct: 544 TADWSHLPYELLARISTRIINEV 566
>GUAA_PYRAE (Q8ZT92) GMP synthase [glutamine-hydrolyzing] (EC
6.3.5.2) (Glutamine amidotransferase) (GMP synthetase)
Length = 505
Score = 30.4 bits (67), Expect = 8.4
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 3 TVDWSKLPTELLNLISQRIYEEV 25
T DWS++P E+L IS RI E+
Sbjct: 462 TADWSRIPFEILEKISSRITSEI 484
>GUAA_LISMO (Q8Y822) GMP synthase [glutamine-hydrolyzing] (EC
6.3.5.2) (Glutamine amidotransferase) (GMP synthetase)
Length = 518
Score = 30.4 bits (67), Expect = 8.4
Identities = 12/27 (44%), Positives = 19/27 (69%)
Query: 3 TVDWSKLPTELLNLISQRIYEEVDLIH 29
T DW+++P ++L IS RI EVD ++
Sbjct: 475 TADWARIPWDVLEKISVRIVNEVDHVN 501
>GUAA_LISMF (Q720X7) GMP synthase [glutamine-hydrolyzing] (EC
6.3.5.2) (Glutamine amidotransferase) (GMP synthetase)
Length = 514
Score = 30.4 bits (67), Expect = 8.4
Identities = 12/27 (44%), Positives = 19/27 (69%)
Query: 3 TVDWSKLPTELLNLISQRIYEEVDLIH 29
T DW+++P ++L IS RI EVD ++
Sbjct: 471 TADWARIPWDVLEKISVRIVNEVDHVN 497
>GUAA_LISIN (Q92CU0) GMP synthase [glutamine-hydrolyzing] (EC
6.3.5.2) (Glutamine amidotransferase) (GMP synthetase)
Length = 518
Score = 30.4 bits (67), Expect = 8.4
Identities = 12/27 (44%), Positives = 19/27 (69%)
Query: 3 TVDWSKLPTELLNLISQRIYEEVDLIH 29
T DW+++P ++L IS RI EVD ++
Sbjct: 475 TADWARIPWDVLEKISVRIVNEVDHVN 501
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.324 0.142 0.452
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,815,399
Number of Sequences: 164201
Number of extensions: 2369332
Number of successful extensions: 4361
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 4346
Number of HSP's gapped (non-prelim): 19
length of query: 402
length of database: 59,974,054
effective HSP length: 112
effective length of query: 290
effective length of database: 41,583,542
effective search space: 12059227180
effective search space used: 12059227180
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 67 (30.4 bits)
Medicago: description of AC147741.8