BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147714.8 + phase: 0 /pseudo
(2334 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GDA6_WHEAT (P04726) Alpha/beta-gliadin clone PW1215 precursor (P... 44 0.004
ZIPA_SALTY (P55894) Cell division protein zipA 43 0.012
KCN3_RAT (P70605) Small conductance calcium-activated potassium ... 42 0.020
GDA5_WHEAT (P04725) Alpha/beta-gliadin A-V precursor (Prolamin) 42 0.026
FTSK_ECOL6 (Q8FJC7) DNA translocase ftsK 41 0.045
Z207_HUMAN (O43670) Zinc finger protein 207 40 0.100
GLTB_WHEAT (P10386) Glutenin, low molecular weight subunit 1D1 p... 40 0.100
GDA9_WHEAT (P18573) Alpha/beta-gliadin MM1 precursor (Prolamin) 40 0.100
GDA0_WHEAT (P02863) Alpha/beta-gliadin precursor (Prolamin) 40 0.100
HOG3_HORVU (P80198) Gamma-hordein 3 39 0.13
GDA1_WHEAT (P04721) Alpha/beta-gliadin A-I precursor (Prolamin) 39 0.13
FTSK_ECOLI (P46889) DNA translocase ftsK 39 0.13
KPC1_COCHE (O42632) Protein kinase C-like (EC 2.7.1.-) 39 0.17
KCN3_HUMAN (Q9UGI6) Small conductance calcium-activated potassiu... 39 0.17
EFG1_CANAL (P43064) Enhanced filamentous growth protein 39 0.22
P121_RAT (P52591) Nuclear envelope pore membrane protein POM 121... 38 0.29
Y911_CAUCR (P33976) Hypothetical protein CC0911 38 0.38
GLTA_WHEAT (P10385) Glutenin, low molecular weight subunit precu... 38 0.38
GDA4_WHEAT (P04724) Alpha/beta-gliadin A-IV precursor (Prolamin) 38 0.38
GDA3_WHEAT (P04723) Alpha/beta-gliadin A-III precursor (Prolamin) 38 0.38
>GDA6_WHEAT (P04726) Alpha/beta-gliadin clone PW1215 precursor
(Prolamin)
Length = 296
Score = 44.3 bits (103), Expect = 0.004
Identities = 30/73 (41%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Query: 390 PPSYPYVSYSQHPFFPPFYHQYPLPPGQPQV--PVYAIAQQMKQQLPVQQQQQNQQARPT 447
PP PY P PPF Q P P QPQ P I+QQ QQ QQQQQ QQ +
Sbjct: 88 PPQLPY------PQPPPFSPQQPYPQPQPQYPQPQQPISQQQAQQQQQQQQQQQQQQQQQ 141
Query: 448 FPPIPMLYAELLP 460
+L +L+P
Sbjct: 142 QILQQILQQQLIP 154
>ZIPA_SALTY (P55894) Cell division protein zipA
Length = 328
Score = 42.7 bits (99), Expect = 0.012
Identities = 35/119 (29%), Positives = 45/119 (37%), Gaps = 23/119 (19%)
Query: 364 ETEVGMVSAGAGQSMATVAPINAAQMPPSYPYVSYSQHPFFPPFYHQYPLPPGQPQVPVY 423
E V V+ GQS AP + Q PY S P PP QPQ P+
Sbjct: 65 EVRVHRVNHAPGQSQEHDAPRQSPQHQYQPPYASAQPRPAAPP----------QPQAPMQ 114
Query: 424 AIAQQMKQQLPVQQQQQNQQARPTFPPIPMLYAELLPTLLHRGHCTTRQGKPAPDPLPP 482
QQ PVQ Q QQ +P+ PP+ + P ++ +P P PP
Sbjct: 115 QPVQQ-----PVQPAPQPQQVQPSAPPVQPPQQQPAP--------PSQAPQPVAQPAPP 160
>KCN3_RAT (P70605) Small conductance calcium-activated potassium
channel protein 3 (SK3)
Length = 732
Score = 42.0 bits (97), Expect = 0.020
Identities = 35/102 (34%), Positives = 43/102 (41%), Gaps = 4/102 (3%)
Query: 402 PFFPPFYHQYPLPPG-QPQVPVYAIAQQMKQQLPVQQQQQNQQARPTFPPIPMLYAELL- 459
P PP Q P P QPQ P QQ +QQ QQQQQ Q P + L ++L+
Sbjct: 39 PSAPPAVPQQPPGPLLQPQPPQLQQQQQQQQQQQQQQQQQQQAPLHPLPQLAQLQSQLVH 98
Query: 460 PTLLHRGHCTTRQGKPAPDP--LPPRFRSDLKCDFHQGALGH 499
P LLH R A L P R + + + LGH
Sbjct: 99 PGLLHSSPTAFRAPNSANSTAILHPSSRQGSQLNLNDHLLGH 140
>GDA5_WHEAT (P04725) Alpha/beta-gliadin A-V precursor (Prolamin)
Length = 319
Score = 41.6 bits (96), Expect = 0.026
Identities = 27/58 (46%), Positives = 29/58 (49%), Gaps = 5/58 (8%)
Query: 388 QMPPSYPYVSYSQHPFFPPFYHQYPLPPGQPQV--PVYAIAQQMKQQLPVQQQQQNQQ 443
Q P P + Y Q FPP Q P P QPQ P I+QQ QQ QQQQQ QQ
Sbjct: 83 QPQPFPPQLPYPQPQSFPP---QQPYPQQQPQYLQPQQPISQQQAQQQQQQQQQQQQQ 137
Score = 34.3 bits (77), Expect = 4.2
Identities = 25/72 (34%), Positives = 35/72 (47%), Gaps = 5/72 (6%)
Query: 412 PLPPGQPQVPVYAIAQQMKQQLPVQQQQQNQQARPTFPPIPMLYAELLPTLLHRGHCTTR 471
P+P QPQ P QQ ++Q+P+ QQQQ + FPP Y + P + +
Sbjct: 24 PVPQLQPQNPSQ---QQPQEQVPLVQQQQFPGQQQQFPP-QQPYPQPQPFPSQQPYLQL- 78
Query: 472 QGKPAPDPLPPR 483
Q P P P PP+
Sbjct: 79 QPFPQPQPFPPQ 90
Score = 33.9 bits (76), Expect = 5.5
Identities = 23/56 (41%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 390 PPSYPYVSYSQHPFFPPFYHQYP--LPPGQPQVPVYAIAQQMKQQLPVQQQQQNQQ 443
PP PY P P+ Q P L P QP A QQ +QQ QQQQ QQ
Sbjct: 88 PPQLPYPQPQSFPPQQPYPQQQPQYLQPQQPISQQQAQQQQQQQQQQQQQQQILQQ 143
Score = 33.1 bits (74), Expect = 9.3
Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 4/58 (6%)
Query: 390 PPSYPYVSYSQHPFFPPFYHQYPLPPGQPQVPVYAIAQQMKQQL----PVQQQQQNQQ 443
P PY+ P PF Q P P Q P QQ Q L P+ QQQ QQ
Sbjct: 70 PSQQPYLQLQPFPQPQPFPPQLPYPQPQSFPPQQPYPQQQPQYLQPQQPISQQQAQQQ 127
>FTSK_ECOL6 (Q8FJC7) DNA translocase ftsK
Length = 1347
Score = 40.8 bits (94), Expect = 0.045
Identities = 41/110 (37%), Positives = 45/110 (40%), Gaps = 8/110 (7%)
Query: 376 QSMATVAPINAAQMP--PSYPYVSYSQ--HPFFPPFYHQYPLPPGQPQVPVYAIAQQMKQ 431
Q VAP Q P P P Y Q P P +Q P QPQ PV Q +
Sbjct: 754 QPQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQYQ-QPQQPVAPQQQYQQP 812
Query: 432 QLPVQQQQQNQQARPTFPPIPMLYAELLPTLLHRGHCTTRQGKPAPDPLP 481
Q PV QQ Q QQ P P +P LL LL R + KP PLP
Sbjct: 813 QQPVTQQPQYQQ--PQQPVVPQPQDTLLHPLLMRNGDSRPLHKPT-TPLP 859
>Z207_HUMAN (O43670) Zinc finger protein 207
Length = 478
Score = 39.7 bits (91), Expect = 0.100
Identities = 29/88 (32%), Positives = 42/88 (46%), Gaps = 6/88 (6%)
Query: 43 PVTTSVLPTASTDARFAMPAGFPYGLPPFFTPSTAAGTSGTANNVLIPATNVVSINATLP 102
PV T P ST A P P P +T STA+ TS T + PA ++ S ATL
Sbjct: 299 PVGTDFKPLNSTPATTTEP---PKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATL- 354
Query: 103 QTTAAVTEPLVHTMPQSVNINTQHGSIP 130
TT + T L+H + +++ + +P
Sbjct: 355 -TTTSATSKLIHP-DEDISLEERRAQLP 380
>GLTB_WHEAT (P10386) Glutenin, low molecular weight subunit 1D1
precursor
Length = 307
Score = 39.7 bits (91), Expect = 0.100
Identities = 26/66 (39%), Positives = 33/66 (49%), Gaps = 9/66 (13%)
Query: 388 QMPPSYPYVSYSQHPFF---PPFYHQYPLPPGQPQVPVYAIAQQMKQQLPVQQQQQNQQA 444
Q+ P P S Q PF+ PPF Q P+ P QP +QQ + LP QQ +QQ
Sbjct: 57 QLFPQQPSFSQQQPPFWQQQPPFSQQQPILPQQPP-----FSQQQQLVLP-QQPPFSQQQ 110
Query: 445 RPTFPP 450
+P PP
Sbjct: 111 QPVLPP 116
>GDA9_WHEAT (P18573) Alpha/beta-gliadin MM1 precursor (Prolamin)
Length = 307
Score = 39.7 bits (91), Expect = 0.100
Identities = 27/77 (35%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 376 QSMATVAPINAAQMPPSYPYVSYSQ----HPFFPPFYHQYPLPPGQPQV-----PVYAIA 426
Q + P Q+P P + Y Q +P PF Q P P QPQ P+
Sbjct: 73 QPYLQLQPFPQPQLPYPQPQLPYPQPQLPYPQPQPFRPQQPYPQSQPQYSQPQQPISQQQ 132
Query: 427 QQMKQQLPVQQQQQNQQ 443
QQ +QQ +QQQQ QQ
Sbjct: 133 QQQQQQQQQKQQQQQQQ 149
>GDA0_WHEAT (P02863) Alpha/beta-gliadin precursor (Prolamin)
Length = 286
Score = 39.7 bits (91), Expect = 0.100
Identities = 26/56 (46%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 390 PPSYPYVSYSQHPFFPPFYHQYPLPPGQPQV--PVYAIAQQMKQQLPVQQQQQNQQ 443
P P + YSQ PF Q P P QPQ P I+QQ +QQ QQQQQ QQ
Sbjct: 80 PFPQPQLPYSQPQ---PFRPQQPYPQPQPQYSQPQQPISQQQQQQQQQQQQQQQQQ 132
>HOG3_HORVU (P80198) Gamma-hordein 3
Length = 289
Score = 39.3 bits (90), Expect = 0.13
Identities = 25/62 (40%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 388 QMPPSYPYVSYSQHPFFPPFYHQYPLPPGQPQVPVYAIAQQMKQQLPVQQQQQNQQARPT 447
Q P PY P PF Q P P Q Q P QQ QQ+P+Q QQQ Q P
Sbjct: 36 QQEPEQPYPQQQPLPQQQPFPQQ-PQLPHQHQFPQQLPQQQFPQQMPLQPQQQFPQQMPL 94
Query: 448 FP 449
P
Sbjct: 95 QP 96
>GDA1_WHEAT (P04721) Alpha/beta-gliadin A-I precursor (Prolamin)
Length = 262
Score = 39.3 bits (90), Expect = 0.13
Identities = 25/52 (48%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 394 PYVSYSQHPFFPPFYHQYPLPPGQPQV--PVYAIAQQMKQQLPVQQQQQNQQ 443
P + YSQ PF Q P P QPQ P I+QQ +QQ QQQQQ QQ
Sbjct: 84 PQLPYSQPQ---PFRPQQPYPQPQPQYSQPQQPISQQQQQQQQQQQQQQQQQ 132
>FTSK_ECOLI (P46889) DNA translocase ftsK
Length = 1329
Score = 39.3 bits (90), Expect = 0.13
Identities = 39/110 (35%), Positives = 42/110 (37%), Gaps = 13/110 (11%)
Query: 376 QSMATVAPINAAQMP----PSYPYVSYSQHPFFPPFYHQYPLPPGQPQVPVYAIAQQMKQ 431
Q VAP Q P P P Q P P +Q QPQ PV Q +
Sbjct: 741 QPQQPVAPQQQYQQPQQPVPPQPQYQQPQQPVAPQPQYQ------QPQQPVAPQQQYQQP 794
Query: 432 QLPVQQQQQNQQARPTFPPIPMLYAELLPTLLHRGHCTTRQGKPAPDPLP 481
Q PV QQQ QQ P P P LL LL R + KP PLP
Sbjct: 795 QQPVAPQQQYQQ--PQQPVAPQPQDTLLHPLLMRNGDSRPLHKPT-TPLP 841
>KPC1_COCHE (O42632) Protein kinase C-like (EC 2.7.1.-)
Length = 1174
Score = 38.9 bits (89), Expect = 0.17
Identities = 33/119 (27%), Positives = 47/119 (38%), Gaps = 17/119 (14%)
Query: 345 AESSVNASKRYGNGHHKKKETEVGMVSAGAGQSMATVAPINAAQMPPSYPYVSYSQHPFF 404
A +++N + + G G + S+G+G A P +Y Y+ P +
Sbjct: 706 AAAAMNKATQPGYGRSNTDYSPQSGRSSGSGYPTEQRMSQQQAPQPAAYDPSVYANIPSY 765
Query: 405 PPFYHQ------------YPLP-PGQPQVPVYAIAQQMKQQLPVQQQQQNQQARPTFPP 450
PP + Q YPLP P PQ P Q +Q P QQ+ QQA PP
Sbjct: 766 PPSHQQPAPVPSYPTKSSYPLPQPPPPQSP----PQHPQQPTPSQQKMPEQQALTQQPP 820
>KCN3_HUMAN (Q9UGI6) Small conductance calcium-activated potassium
channel protein 3 (SK3) (SKCa3)
Length = 736
Score = 38.9 bits (89), Expect = 0.17
Identities = 33/101 (32%), Positives = 44/101 (42%), Gaps = 14/101 (13%)
Query: 412 PLPPGQPQVPVYAIAQ----QMKQQLPVQQQQQNQQARPTFPPIPMLYAELL------PT 461
P PP PQ P+ Q Q++QQ QQQQQ QQ + PP P+ L P
Sbjct: 45 PAPPAAPQQPLGPSLQPQPPQLQQQQQQQQQQQQQQQQQQQPPHPLSQLAQLQSQPVHPG 104
Query: 462 LLHRGHCTTRQGKPAPDP---LPPRFRSDLKCDFHQGALGH 499
LLH T + P+ + L P R + + + LGH
Sbjct: 105 LLHSSP-TAFRAPPSSNSTAILHPSSRQGSQLNLNDHLLGH 144
>EFG1_CANAL (P43064) Enhanced filamentous growth protein
Length = 552
Score = 38.5 bits (88), Expect = 0.22
Identities = 30/93 (32%), Positives = 40/93 (42%), Gaps = 7/93 (7%)
Query: 356 GNGHHKKKETEVGMVSAGAGQSMATVAPIN-----AAQMPPSYPYVSYSQHPFFPPFYHQ 410
GNG+ T G +GA + +T +P+N AA +P Y +Y+Q +P Y Q
Sbjct: 356 GNGN-SISATSGGSNVSGASGAGSTTSPVNTKAATAAGIPQGNYYQTYNQQQ-YPQQYGQ 413
Query: 411 YPLPPGQPQVPVYAIAQQMKQQLPVQQQQQNQQ 443
Y P P Q QQQQQ QQ
Sbjct: 414 YNAPGKNQNTPASQPGSTTNDQYLQQQQQQQQQ 446
>P121_RAT (P52591) Nuclear envelope pore membrane protein POM 121
(Pore membrane protein of 121 kDa) (P145)
Length = 1199
Score = 38.1 bits (87), Expect = 0.29
Identities = 35/122 (28%), Positives = 48/122 (38%), Gaps = 18/122 (14%)
Query: 26 LAAQEQSATAIPIATAIPVTTSVLPTA------STDARFAMPAGFPYGLPPFFTPSTAAG 79
L +AT P +TA+P T + S + AMP P+ L P+T A
Sbjct: 716 LPTSSSAATTTPASTALPTTATATAHTFKPIFESVEPFAAMPLSPPFSLKQTTAPATTAA 775
Query: 80 TSGTANNVLIPATNVVSINATLPQ---------TTAAVTEPLVHTMPQSVNINTQHGSIP 130
TS L AT+ V+ T TTAA T + + QS+ G+ P
Sbjct: 776 TSAPLLTGLGTATSTVATGTTASASKPVFGFGVTTAASTASTIASTSQSILFG---GAPP 832
Query: 131 VT 132
VT
Sbjct: 833 VT 834
>Y911_CAUCR (P33976) Hypothetical protein CC0911
Length = 493
Score = 37.7 bits (86), Expect = 0.38
Identities = 25/72 (34%), Positives = 36/72 (49%), Gaps = 5/72 (6%)
Query: 2 AQLRTELATLREELAKANDVMTALLAAQEQSATAIPIATAIPVTTSVLPTASTDARFAMP 61
A LR+E+ATLR +L K + A+ +A + +A A P A P P A+T A+ + P
Sbjct: 50 AALRSEIATLRAQLQKMEQRLDAVTSAPQTTAPAAPPAIQPPA-----PVATTVAKASPP 104
Query: 62 AGFPYGLPPFFT 73
P P T
Sbjct: 105 PAKPASAPTEIT 116
>GLTA_WHEAT (P10385) Glutenin, low molecular weight subunit
precursor
Length = 356
Score = 37.7 bits (86), Expect = 0.38
Identities = 30/97 (30%), Positives = 39/97 (39%), Gaps = 14/97 (14%)
Query: 383 PINAAQMPP----SYPYVSYSQHPFF-----PPFYHQYPLPPGQPQVPVYAIAQQMKQQL 433
PI+ Q PP P S Q P + PP+ Q P Q Q P ++ QQ
Sbjct: 76 PISQQQQPPFSQQQQPQFSQQQQPPYSQQQQPPYSQQQQPPFSQQQQPPFSQQQQQPPFT 135
Query: 434 PVQQQQQ-----NQQARPTFPPIPMLYAELLPTLLHR 465
QQQQQ QQ +P F P + + P L +
Sbjct: 136 QQQQQQQQQQPFTQQQQPPFSQQPPISQQQQPPFLQQ 172
Score = 35.4 bits (80), Expect = 1.9
Identities = 34/98 (34%), Positives = 41/98 (41%), Gaps = 21/98 (21%)
Query: 383 PINAAQMPPSYPYVSYSQHPFF----PPFYHQYPLPP------GQPQVPVYAIAQQ--MK 430
P + Q PP Y Q PF PPF Q PP Q Q + QQ
Sbjct: 100 PYSQQQQPP---YSQQQQPPFSQQQQPPFSQQQQQPPFTQQQQQQQQQQPFTQQQQPPFS 156
Query: 431 QQLPVQQQQQN---QQARPTF---PPIPMLYAELLPTL 462
QQ P+ QQQQ QQ RP F IP+++ +L L
Sbjct: 157 QQPPISQQQQPPFLQQQRPPFSRQQQIPVIHPSVLQQL 194
Score = 34.7 bits (78), Expect = 3.2
Identities = 29/83 (34%), Positives = 37/83 (43%), Gaps = 19/83 (22%)
Query: 383 PINAAQMPP-----SYPYVSYSQHPFF-----PPFYHQYPLPPGQPQVPVYAIAQQ---- 428
P + Q PP P+ Q P F PPF Q P+ Q Q P ++ QQ
Sbjct: 37 PFSQQQQPPFSQQQQSPFSQQQQQPPFAQQQQPPFSQQPPI--SQQQQPPFSQQQQPQFS 94
Query: 429 MKQQLPVQQQQQ---NQQARPTF 448
+QQ P QQQQ +QQ +P F
Sbjct: 95 QQQQPPYSQQQQPPYSQQQQPPF 117
>GDA4_WHEAT (P04724) Alpha/beta-gliadin A-IV precursor (Prolamin)
Length = 297
Score = 37.7 bits (86), Expect = 0.38
Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 376 QSMATVAPINAAQMPPSYPYVSYSQHPFFPPFYHQYPLPPGQPQVPVYAIAQQMKQQLPV 435
Q + P Q+P P + Y Q F P YP P Q P I+QQ +QQ
Sbjct: 73 QPYMQLQPFPQPQLPYPQPQLPYPQPQPFRP-QQSYPQPQPQYSQPQQPISQQQQQQQ-- 129
Query: 436 QQQQQNQQ 443
QQQQQ QQ
Sbjct: 130 QQQQQQQQ 137
>GDA3_WHEAT (P04723) Alpha/beta-gliadin A-III precursor (Prolamin)
Length = 282
Score = 37.7 bits (86), Expect = 0.38
Identities = 28/73 (38%), Positives = 34/73 (46%), Gaps = 11/73 (15%)
Query: 388 QMPPSYPYVSYSQHPFFPPFYHQYPLPPGQPQVPVYAIAQQMKQQLPVQQQQQNQQARPT 447
Q P P + Y Q FPP Q P P QPQ P Q +Q + QQ QQ QQ + T
Sbjct: 78 QPQPFPPQLPYPQTQPFPP---QQPYPQPQPQYP------QPQQPISQQQAQQQQQQQQT 128
Query: 448 FPPIPMLYAELLP 460
I L +L+P
Sbjct: 129 LQQI--LQQQLIP 139
Score = 37.0 bits (84), Expect = 0.65
Identities = 29/76 (38%), Positives = 31/76 (40%), Gaps = 15/76 (19%)
Query: 383 PINAAQMPPSYPYVSY----SQHPF-----FPP---FYHQYPLPPGQP---QVPVYAIAQ 427
P Q PP PY SQ P+ FPP + P PP QP P Y Q
Sbjct: 52 PGQQEQFPPQQPYPHQQPFPSQQPYPQPQPFPPQLPYPQTQPFPPQQPYPQPQPQYPQPQ 111
Query: 428 QMKQQLPVQQQQQNQQ 443
Q Q QQQQQ QQ
Sbjct: 112 QPISQQQAQQQQQQQQ 127
Score = 35.4 bits (80), Expect = 1.9
Identities = 25/76 (32%), Positives = 35/76 (45%), Gaps = 18/76 (23%)
Query: 412 PLPPGQPQVPVYAIAQQMKQQLPVQQQQQ----NQQARPTFPPIPMLYAELLPTLLHRGH 467
P+P QPQ P QQ ++Q+P+ QQQQ Q+ P P P H+
Sbjct: 24 PVPQLQPQNP---SQQQPQEQVPLMQQQQQFPGQQEQFPPQQPYP-----------HQQP 69
Query: 468 CTTRQGKPAPDPLPPR 483
++Q P P P PP+
Sbjct: 70 FPSQQPYPQPQPFPPQ 85
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.345 0.151 0.521
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 251,641,902
Number of Sequences: 164201
Number of extensions: 10288533
Number of successful extensions: 52361
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 108
Number of HSP's that attempted gapping in prelim test: 51184
Number of HSP's gapped (non-prelim): 687
length of query: 2334
length of database: 59,974,054
effective HSP length: 126
effective length of query: 2208
effective length of database: 39,284,728
effective search space: 86740679424
effective search space used: 86740679424
T: 11
A: 40
X1: 15 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.6 bits)
S2: 74 (33.1 bits)
Medicago: description of AC147714.8