
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147538.1 + phase: 0
(138 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YN65_YEAST (P42837) Hypothetical 101.7 kDa protein in EGT2-KRE1 ... 33 0.14
LONM_SCHPO (Q09769) Putative Lon protease homolog, mitochondrial... 32 0.31
RCC1_CANAL (P52499) RCC1 protein 31 0.91
KE4_BRARE (Q9PUB8) Zinc transporter SLC39A7 homolog (Histidine-r... 31 0.91
SNX4_YEAST (P47057) Sorting nexin 4 30 2.0
TCP4_NEUCR (Q872F4) Putative RNA polymerase II transcriptional c... 29 2.7
IPO9_MOUSE (Q91YE6) Importin 9 (Importin 9a) (Imp9a) (Importin 9... 29 2.7
CALX_PEA (O82709) Calnexin homolog precursor 29 2.7
BAG_STRAG (P27951) IgA FC receptor precursor (Beta antigen) (B a... 29 2.7
ZA70_MOUSE (P43404) Tyrosine-protein kinase ZAP-70 (EC 2.7.1.112... 29 3.5
SNZ3_YEAST (P43545) Probable pyridoxin biosynthesis protein SNZ3... 28 4.5
SNZ2_YEAST (P53824) Probable pyridoxin biosynthesis protein SNZ2... 28 4.5
PDX1_SUBDO (Q8WPW2) Probable pyridoxin biosynthesis SNZERR (PDX1... 28 4.5
IPO9_HUMAN (Q96P70) Importin 9 (Imp9) (Ran-binding protein 9) (R... 28 4.5
DB73_DROME (P26802) Probable ATP-dependent RNA helicase Dbp73D (... 28 4.5
ARS2_MOUSE (Q99MR6) Arsenite-resistance protein 2 28 4.5
YHAI_BACSU (O07517) Hypothetical protein yhaI 28 5.9
KIME_ARATH (P46086) Mevalonate kinase (EC 2.7.1.36) (MK) 28 5.9
CHD2_HUMAN (O14647) Chromodomain-helicase-DNA-binding protein 2 ... 28 5.9
ADT1_GOSHI (O22342) ADP,ATP carrier protein 1, mitochondrial pre... 28 5.9
>YN65_YEAST (P42837) Hypothetical 101.7 kDa protein in EGT2-KRE1
intergenic region
Length = 879
Score = 33.5 bits (75), Expect = 0.14
Identities = 35/131 (26%), Positives = 59/131 (44%), Gaps = 7/131 (5%)
Query: 9 KQSEASSPLKQVDSA--IEKTKG---ETADGDKDEIIK-ELKKVKKQNFVTHCLLSAMIV 62
KQS ++ LK + S+ +EK +G ET D D+D K EL+ + + +
Sbjct: 701 KQSWLNNKLKMITSSKSLEKAEGRVVETTDLDRDTSPKQELELYEHYLHIISDRSQKLEE 760
Query: 63 LTVAWQLSEVSLVMRVKDGMNHPFRSV-GNMFKEMVKDVSGSNGQDAAGDKENNESTSLP 121
++ S+ + + + P R V G ++ +D + D GD EN+E T+
Sbjct: 761 KMNSFSYSKYPIFISHESSEIPPMRKVIGEPLVDIAEDFTDVYDDDDDGDDENDEMTTEA 820
Query: 122 SLKIPDMTNVD 132
L PD +VD
Sbjct: 821 LLIAPDHVSVD 831
>LONM_SCHPO (Q09769) Putative Lon protease homolog, mitochondrial
precursor (EC 3.4.21.-)
Length = 1067
Score = 32.3 bits (72), Expect = 0.31
Identities = 20/61 (32%), Positives = 34/61 (54%), Gaps = 9/61 (14%)
Query: 73 SLVMRVKDGMNHPFRSVGNMFKEMVKDVSGSNGQDAAGDKENNESTSLPSLKIPDMTNVD 132
S+V + D +N +S G K+ S + +DAA N E++S+P LK+PD N++
Sbjct: 781 SIVKEIDDELNSKEKSTGKSGKK----TSPQSSEDAA----NKEASSVP-LKVPDKVNIE 831
Query: 133 V 133
+
Sbjct: 832 I 832
>RCC1_CANAL (P52499) RCC1 protein
Length = 464
Score = 30.8 bits (68), Expect = 0.91
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Query: 94 KEMVKDVSGSNGQDAAGDKEN---NESTSLPSL 123
KE++KD+ G NG D D E+ NE+ S P+L
Sbjct: 105 KEVLKDIDGKNGNDDDDDDEDGDLNEAESTPAL 137
>KE4_BRARE (Q9PUB8) Zinc transporter SLC39A7 homolog (Histidine-rich
membrane protein Ke4 homolog) (Fragment)
Length = 352
Score = 30.8 bits (68), Expect = 0.91
Identities = 16/46 (34%), Positives = 23/46 (49%)
Query: 3 KGGETVKQSEASSPLKQVDSAIEKTKGETADGDKDEIIKELKKVKK 48
KGG + S + S K DS E K G+KD+++ + K KK
Sbjct: 243 KGGHSHSHSHSPSAPKSKDSDEEDDKKGQKKGEKDKVVSQQKPTKK 288
>SNX4_YEAST (P47057) Sorting nexin 4
Length = 423
Score = 29.6 bits (65), Expect = 2.0
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 6/114 (5%)
Query: 18 KQVDSAIEKTKGETADGDKDEIIKELKKVKKQN--FVTHCLLSAMIVLTVAWQLSEVSLV 75
K + +++ K E D + K V KQN F S + TV V
Sbjct: 160 KVLQDSLQPNKDEVTDA----FMNAFKTVHKQNEEFTEIREKSDKLDRTVTKIDKLFHKV 215
Query: 76 MRVKDGMNHPFRSVGNMFKEMVKDVSGSNGQDAAGDKENNESTSLPSLKIPDMT 129
++ D M+ + +G+ +E+ + V+G N + AA K NE + S + D+T
Sbjct: 216 VKKNDSMSEDYTKLGSNLQELQELVTGENEELAAKLKIFNEGVTQLSYGLQDLT 269
>TCP4_NEUCR (Q872F4) Putative RNA polymerase II transcriptional
coactivator
Length = 172
Score = 29.3 bits (64), Expect = 2.7
Identities = 14/46 (30%), Positives = 24/46 (51%)
Query: 5 GETVKQSEASSPLKQVDSAIEKTKGETADGDKDEIIKELKKVKKQN 50
G ++ + +Q D+ IE K + + +K+ I KE KK +K N
Sbjct: 109 GHAIEDPGFAQVAEQTDAPIETPKVKALESNKESIKKEKKKPRKSN 154
>IPO9_MOUSE (Q91YE6) Importin 9 (Importin 9a) (Imp9a) (Importin 9b)
(Imp9b) (Ran-binding protein 9) (RanBP9)
Length = 1041
Score = 29.3 bits (64), Expect = 2.7
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 11/85 (12%)
Query: 23 AIEKTKGETAD-GDKDEIIKELKKVKKQNFVTHCLLSAMIVLTVAWQLSEVSLVMRVKDG 81
A++ G T+D G K E++K + + K NF H + S +L + W S V+
Sbjct: 251 ALQMPDGPTSDSGFKMEVLKAVTALVK-NFPKHMVSSMQQILPIVWNTLTESAAFYVRTE 309
Query: 82 MNHPFRSVGNMFKEMVKDVSGSNGQ 106
+N + E V+D S+G+
Sbjct: 310 VN---------YTEEVEDPVDSDGE 325
>CALX_PEA (O82709) Calnexin homolog precursor
Length = 551
Score = 29.3 bits (64), Expect = 2.7
Identities = 28/101 (27%), Positives = 48/101 (46%), Gaps = 14/101 (13%)
Query: 34 GDKDEIIKELKKVKKQ-NFVTHCLLSAMIVLTVAWQLSEVSLVMRVKDGMNHPFRSVGNM 92
G K++II+ ++K +KQ N ++S +IV VS+ R+ G P N+
Sbjct: 461 GQKEKIIEIIEKGEKQPNLTIGIIVSVVIVF--------VSIFFRLIFGGKKPANVEANV 512
Query: 93 FKEMVKDVSGSNGQDAAGDKENN---ESTSLPSLKIPDMTN 130
K+ K + + + G+KE+N E T+ P + P N
Sbjct: 513 EKK--KTNTETTSKQDGGEKEDNKEKEETANPPRRRPKRDN 551
>BAG_STRAG (P27951) IgA FC receptor precursor (Beta antigen) (B
antigen)
Length = 1164
Score = 29.3 bits (64), Expect = 2.7
Identities = 18/55 (32%), Positives = 31/55 (55%), Gaps = 2/55 (3%)
Query: 6 ETVKQSEASSPLKQVDSAIEKTKGETADGDKDEIIKELKKVKK--QNFVTHCLLS 58
ET K ++ +K+ +EKT GET+ D + K+L++ K +N V + +LS
Sbjct: 74 ETTKMEIPTTDIKKAVEPVEKTAGETSATDTGKREKQLQQWKNNLKNDVDNTILS 128
Score = 28.9 bits (63), Expect = 3.5
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 2 SKGGETVKQSEASSPLKQVDSAIEKTKGET---------ADGDKDEIIKELKKVKKQ 49
+K +T+KQS+ L +D + K + + DKD ++K+++ ++KQ
Sbjct: 176 AKQQKTLKQSDTKVDLSNIDKELNHQKSQVEKMAEQKGITNEDKDSMLKKIEDIRKQ 232
>ZA70_MOUSE (P43404) Tyrosine-protein kinase ZAP-70 (EC 2.7.1.112)
(70 kDa zeta-associated protein) (Syk-related tyrosine
kinase)
Length = 618
Score = 28.9 bits (63), Expect = 3.5
Identities = 24/76 (31%), Positives = 36/76 (46%), Gaps = 8/76 (10%)
Query: 7 TVKQSEASSPLKQVDSAIEKTKGETADGDKDEIIKELKKVKKQNFVTHCLLSAMIV-LTV 65
+V+Q KQ+D AI+ K T DKDE+++E + + H L + IV L
Sbjct: 350 SVRQGVYRMRKKQIDVAIKVLKQGTEKADKDEMMREAQ-------IMHQLDNPYIVRLIG 402
Query: 66 AWQLSEVSLVMRVKDG 81
Q + LVM + G
Sbjct: 403 VCQAEALMLVMEMAGG 418
>SNZ3_YEAST (P43545) Probable pyridoxin biosynthesis protein SNZ3
(PDX1 homolog 3)
Length = 298
Score = 28.5 bits (62), Expect = 4.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 22 SAIEKTKGETADGDKDEIIKELKKVKKQ 49
+A+ +TKGE GD E +K + K+K +
Sbjct: 140 AAMIRTKGEAGTGDVSEAVKHITKIKAE 167
>SNZ2_YEAST (P53824) Probable pyridoxin biosynthesis protein SNZ2
(PDX1 homolog 2)
Length = 298
Score = 28.5 bits (62), Expect = 4.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 22 SAIEKTKGETADGDKDEIIKELKKVKKQ 49
+A+ +TKGE GD E +K + K+K +
Sbjct: 140 AAMIRTKGEAGTGDVSEAVKHITKIKAE 167
>PDX1_SUBDO (Q8WPW2) Probable pyridoxin biosynthesis SNZERR (PDX1
homolog) (Ethylene response protein)
Length = 306
Score = 28.5 bits (62), Expect = 4.5
Identities = 12/38 (31%), Positives = 23/38 (59%)
Query: 22 SAIEKTKGETADGDKDEIIKELKKVKKQNFVTHCLLSA 59
+A+ +TKGE G+ E ++ +++ ++ V CL SA
Sbjct: 153 AAMIRTKGEAGTGNVVEAVRHARQINREIRVAQCLSSA 190
>IPO9_HUMAN (Q96P70) Importin 9 (Imp9) (Ran-binding protein 9)
(RanbP9) (HSPC273)
Length = 1041
Score = 28.5 bits (62), Expect = 4.5
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 11/85 (12%)
Query: 23 AIEKTKGETAD-GDKDEIIKELKKVKKQNFVTHCLLSAMIVLTVAWQLSEVSLVMRVKDG 81
A++ G T+D G K E++K + + K NF H + S +L + W S V+
Sbjct: 251 ALQIPDGPTSDSGFKMEVLKAVTALVK-NFPKHMVSSMQQILPIVWNTLTESAAFYVRTE 309
Query: 82 MNHPFRSVGNMFKEMVKDVSGSNGQ 106
+N + E V+D S+G+
Sbjct: 310 VN---------YTEEVEDPVDSDGE 325
>DB73_DROME (P26802) Probable ATP-dependent RNA helicase Dbp73D
(DEAD-box protein 73D)
Length = 687
Score = 28.5 bits (62), Expect = 4.5
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 3 KGGETVKQSEASSPLKQVDSAIEKTKGETADGDKDEIIKELKKVK 47
K E V+ S+ SS K + +KTK + + K I K+LK ++
Sbjct: 642 KANEIVQSSKKSSETKNSKTKADKTKYQPKETKKQIIAKQLKAIE 686
>ARS2_MOUSE (Q99MR6) Arsenite-resistance protein 2
Length = 875
Score = 28.5 bits (62), Expect = 4.5
Identities = 18/52 (34%), Positives = 25/52 (47%), Gaps = 4/52 (7%)
Query: 3 KGGETVKQSEASSPLKQVDSAIEKTKGETADGD----KDEIIKELKKVKKQN 50
K + ++ E + S +KTK DGD K+E KE KK KK+N
Sbjct: 301 KANDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEEAEKEAKKSKKRN 352
>YHAI_BACSU (O07517) Hypothetical protein yhaI
Length = 113
Score = 28.1 bits (61), Expect = 5.9
Identities = 19/52 (36%), Positives = 26/52 (49%), Gaps = 4/52 (7%)
Query: 20 VDSAIEKTKGETADGDKDEIIKELKKVKKQNFVTHCLLSAMIVLTVAWQLSE 71
+D + K +GE DE+ +EL K Q FVT L A+ A QL+E
Sbjct: 34 IDKGLSKEEGEAVMRICDELSEELATQKAQGFVTFDKLLALF----AGQLNE 81
>KIME_ARATH (P46086) Mevalonate kinase (EC 2.7.1.36) (MK)
Length = 378
Score = 28.1 bits (61), Expect = 5.9
Identities = 18/52 (34%), Positives = 32/52 (60%), Gaps = 4/52 (7%)
Query: 22 SAIEKTKGETADGDKDEIIKELKKVKK----QNFVTHCLLSAMIVLTVAWQL 69
+AI ++K ET+ +K+E IKEL ++ + V+H + A+I+ TV +L
Sbjct: 276 AAIIQSKDETSVTEKEERIKELMEMNQGLLLSMGVSHSSIEAVILTTVKHKL 327
>CHD2_HUMAN (O14647) Chromodomain-helicase-DNA-binding protein 2
(CHD-2)
Length = 1739
Score = 28.1 bits (61), Expect = 5.9
Identities = 32/111 (28%), Positives = 47/111 (41%), Gaps = 4/111 (3%)
Query: 10 QSEASSPLKQVDSAIEKTKGETADGDKDEIIKELKKVKKQNFVTHCLLSAMIVLTVAWQL 69
Q+ A LK + +EK KG G++ ++ K +VKK+N V I L+
Sbjct: 1311 QTRADYLLKLLRKGLEK-KGAVTGGEEAKLKKRKPRVKKENKVPRLKEEHGIELSSPRHS 1369
Query: 70 SEVSLVMRVK-DGMNHPFRSVGNMFKEMV--KDVSGSNGQDAAGDKENNES 117
S VK DG+ KE K+ S+ +D GDKE +S
Sbjct: 1370 DNPSEEGEVKDDGLEKSPMKKKQKKKENKENKEKQMSSRKDKEGDKERKKS 1420
>ADT1_GOSHI (O22342) ADP,ATP carrier protein 1, mitochondrial
precursor (ADP/ATP translocase 1) (Adenine nucleotide
translocator 1) (ANT 1)
Length = 386
Score = 28.1 bits (61), Expect = 5.9
Identities = 14/49 (28%), Positives = 27/49 (54%), Gaps = 6/49 (12%)
Query: 57 LSAMIVLTVAWQLSEVSLVMRVKDGM------NHPFRSVGNMFKEMVKD 99
+SA + T A + V L+++ +D M + P++ +G+ FK +KD
Sbjct: 95 VSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTIKD 143
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.308 0.127 0.343
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,794,723
Number of Sequences: 164201
Number of extensions: 579611
Number of successful extensions: 1661
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1649
Number of HSP's gapped (non-prelim): 22
length of query: 138
length of database: 59,974,054
effective HSP length: 99
effective length of query: 39
effective length of database: 43,718,155
effective search space: 1705008045
effective search space used: 1705008045
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 60 (27.7 bits)
Medicago: description of AC147538.1