Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC147538.1 + phase: 0 
         (138 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

YN65_YEAST (P42837) Hypothetical 101.7 kDa protein in EGT2-KRE1 ...    33  0.14
LONM_SCHPO (Q09769) Putative Lon protease homolog, mitochondrial...    32  0.31
RCC1_CANAL (P52499) RCC1 protein                                       31  0.91
KE4_BRARE (Q9PUB8) Zinc transporter SLC39A7 homolog (Histidine-r...    31  0.91
SNX4_YEAST (P47057) Sorting nexin 4                                    30  2.0
TCP4_NEUCR (Q872F4) Putative RNA polymerase II transcriptional c...    29  2.7
IPO9_MOUSE (Q91YE6) Importin 9 (Importin 9a) (Imp9a) (Importin 9...    29  2.7
CALX_PEA (O82709) Calnexin homolog precursor                           29  2.7
BAG_STRAG (P27951) IgA FC receptor precursor (Beta antigen) (B a...    29  2.7
ZA70_MOUSE (P43404) Tyrosine-protein kinase ZAP-70 (EC 2.7.1.112...    29  3.5
SNZ3_YEAST (P43545) Probable pyridoxin biosynthesis protein SNZ3...    28  4.5
SNZ2_YEAST (P53824) Probable pyridoxin biosynthesis protein SNZ2...    28  4.5
PDX1_SUBDO (Q8WPW2) Probable pyridoxin biosynthesis SNZERR (PDX1...    28  4.5
IPO9_HUMAN (Q96P70) Importin 9 (Imp9) (Ran-binding protein 9) (R...    28  4.5
DB73_DROME (P26802) Probable ATP-dependent RNA helicase Dbp73D (...    28  4.5
ARS2_MOUSE (Q99MR6) Arsenite-resistance protein 2                      28  4.5
YHAI_BACSU (O07517) Hypothetical protein yhaI                          28  5.9
KIME_ARATH (P46086) Mevalonate kinase (EC 2.7.1.36) (MK)               28  5.9
CHD2_HUMAN (O14647) Chromodomain-helicase-DNA-binding protein 2 ...    28  5.9
ADT1_GOSHI (O22342) ADP,ATP carrier protein 1, mitochondrial pre...    28  5.9

>YN65_YEAST (P42837) Hypothetical 101.7 kDa protein in EGT2-KRE1
           intergenic region
          Length = 879

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 35/131 (26%), Positives = 59/131 (44%), Gaps = 7/131 (5%)

Query: 9   KQSEASSPLKQVDSA--IEKTKG---ETADGDKDEIIK-ELKKVKKQNFVTHCLLSAMIV 62
           KQS  ++ LK + S+  +EK +G   ET D D+D   K EL+  +    +       +  
Sbjct: 701 KQSWLNNKLKMITSSKSLEKAEGRVVETTDLDRDTSPKQELELYEHYLHIISDRSQKLEE 760

Query: 63  LTVAWQLSEVSLVMRVKDGMNHPFRSV-GNMFKEMVKDVSGSNGQDAAGDKENNESTSLP 121
              ++  S+  + +  +     P R V G    ++ +D +     D  GD EN+E T+  
Sbjct: 761 KMNSFSYSKYPIFISHESSEIPPMRKVIGEPLVDIAEDFTDVYDDDDDGDDENDEMTTEA 820

Query: 122 SLKIPDMTNVD 132
            L  PD  +VD
Sbjct: 821 LLIAPDHVSVD 831


>LONM_SCHPO (Q09769) Putative Lon protease homolog, mitochondrial
           precursor (EC 3.4.21.-)
          Length = 1067

 Score = 32.3 bits (72), Expect = 0.31
 Identities = 20/61 (32%), Positives = 34/61 (54%), Gaps = 9/61 (14%)

Query: 73  SLVMRVKDGMNHPFRSVGNMFKEMVKDVSGSNGQDAAGDKENNESTSLPSLKIPDMTNVD 132
           S+V  + D +N   +S G   K+     S  + +DAA    N E++S+P LK+PD  N++
Sbjct: 781 SIVKEIDDELNSKEKSTGKSGKK----TSPQSSEDAA----NKEASSVP-LKVPDKVNIE 831

Query: 133 V 133
           +
Sbjct: 832 I 832


>RCC1_CANAL (P52499) RCC1 protein
          Length = 464

 Score = 30.8 bits (68), Expect = 0.91
 Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 3/33 (9%)

Query: 94  KEMVKDVSGSNGQDAAGDKEN---NESTSLPSL 123
           KE++KD+ G NG D   D E+   NE+ S P+L
Sbjct: 105 KEVLKDIDGKNGNDDDDDDEDGDLNEAESTPAL 137


>KE4_BRARE (Q9PUB8) Zinc transporter SLC39A7 homolog (Histidine-rich
           membrane protein Ke4 homolog) (Fragment)
          Length = 352

 Score = 30.8 bits (68), Expect = 0.91
 Identities = 16/46 (34%), Positives = 23/46 (49%)

Query: 3   KGGETVKQSEASSPLKQVDSAIEKTKGETADGDKDEIIKELKKVKK 48
           KGG +   S + S  K  DS  E  K     G+KD+++ + K  KK
Sbjct: 243 KGGHSHSHSHSPSAPKSKDSDEEDDKKGQKKGEKDKVVSQQKPTKK 288


>SNX4_YEAST (P47057) Sorting nexin 4
          Length = 423

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 6/114 (5%)

Query: 18  KQVDSAIEKTKGETADGDKDEIIKELKKVKKQN--FVTHCLLSAMIVLTVAWQLSEVSLV 75
           K +  +++  K E  D      +   K V KQN  F      S  +  TV         V
Sbjct: 160 KVLQDSLQPNKDEVTDA----FMNAFKTVHKQNEEFTEIREKSDKLDRTVTKIDKLFHKV 215

Query: 76  MRVKDGMNHPFRSVGNMFKEMVKDVSGSNGQDAAGDKENNESTSLPSLKIPDMT 129
           ++  D M+  +  +G+  +E+ + V+G N + AA  K  NE  +  S  + D+T
Sbjct: 216 VKKNDSMSEDYTKLGSNLQELQELVTGENEELAAKLKIFNEGVTQLSYGLQDLT 269


>TCP4_NEUCR (Q872F4) Putative RNA polymerase II transcriptional
           coactivator
          Length = 172

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 14/46 (30%), Positives = 24/46 (51%)

Query: 5   GETVKQSEASSPLKQVDSAIEKTKGETADGDKDEIIKELKKVKKQN 50
           G  ++    +   +Q D+ IE  K +  + +K+ I KE KK +K N
Sbjct: 109 GHAIEDPGFAQVAEQTDAPIETPKVKALESNKESIKKEKKKPRKSN 154


>IPO9_MOUSE (Q91YE6) Importin 9 (Importin 9a) (Imp9a) (Importin 9b)
           (Imp9b) (Ran-binding protein 9) (RanBP9)
          Length = 1041

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 11/85 (12%)

Query: 23  AIEKTKGETAD-GDKDEIIKELKKVKKQNFVTHCLLSAMIVLTVAWQLSEVSLVMRVKDG 81
           A++   G T+D G K E++K +  + K NF  H + S   +L + W     S    V+  
Sbjct: 251 ALQMPDGPTSDSGFKMEVLKAVTALVK-NFPKHMVSSMQQILPIVWNTLTESAAFYVRTE 309

Query: 82  MNHPFRSVGNMFKEMVKDVSGSNGQ 106
           +N         + E V+D   S+G+
Sbjct: 310 VN---------YTEEVEDPVDSDGE 325


>CALX_PEA (O82709) Calnexin homolog precursor
          Length = 551

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 28/101 (27%), Positives = 48/101 (46%), Gaps = 14/101 (13%)

Query: 34  GDKDEIIKELKKVKKQ-NFVTHCLLSAMIVLTVAWQLSEVSLVMRVKDGMNHPFRSVGNM 92
           G K++II+ ++K +KQ N     ++S +IV         VS+  R+  G   P     N+
Sbjct: 461 GQKEKIIEIIEKGEKQPNLTIGIIVSVVIVF--------VSIFFRLIFGGKKPANVEANV 512

Query: 93  FKEMVKDVSGSNGQDAAGDKENN---ESTSLPSLKIPDMTN 130
            K+  K  + +  +   G+KE+N   E T+ P  + P   N
Sbjct: 513 EKK--KTNTETTSKQDGGEKEDNKEKEETANPPRRRPKRDN 551


>BAG_STRAG (P27951) IgA FC receptor precursor (Beta antigen) (B
           antigen)
          Length = 1164

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 18/55 (32%), Positives = 31/55 (55%), Gaps = 2/55 (3%)

Query: 6   ETVKQSEASSPLKQVDSAIEKTKGETADGDKDEIIKELKKVKK--QNFVTHCLLS 58
           ET K    ++ +K+    +EKT GET+  D  +  K+L++ K   +N V + +LS
Sbjct: 74  ETTKMEIPTTDIKKAVEPVEKTAGETSATDTGKREKQLQQWKNNLKNDVDNTILS 128



 Score = 28.9 bits (63), Expect = 3.5
 Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 9/57 (15%)

Query: 2   SKGGETVKQSEASSPLKQVDSAIEKTKGET---------ADGDKDEIIKELKKVKKQ 49
           +K  +T+KQS+    L  +D  +   K +           + DKD ++K+++ ++KQ
Sbjct: 176 AKQQKTLKQSDTKVDLSNIDKELNHQKSQVEKMAEQKGITNEDKDSMLKKIEDIRKQ 232


>ZA70_MOUSE (P43404) Tyrosine-protein kinase ZAP-70 (EC 2.7.1.112)
           (70 kDa zeta-associated protein) (Syk-related tyrosine
           kinase)
          Length = 618

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 24/76 (31%), Positives = 36/76 (46%), Gaps = 8/76 (10%)

Query: 7   TVKQSEASSPLKQVDSAIEKTKGETADGDKDEIIKELKKVKKQNFVTHCLLSAMIV-LTV 65
           +V+Q       KQ+D AI+  K  T   DKDE+++E +       + H L +  IV L  
Sbjct: 350 SVRQGVYRMRKKQIDVAIKVLKQGTEKADKDEMMREAQ-------IMHQLDNPYIVRLIG 402

Query: 66  AWQLSEVSLVMRVKDG 81
             Q   + LVM +  G
Sbjct: 403 VCQAEALMLVMEMAGG 418


>SNZ3_YEAST (P43545) Probable pyridoxin biosynthesis protein SNZ3
           (PDX1 homolog 3)
          Length = 298

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 11/28 (39%), Positives = 18/28 (64%)

Query: 22  SAIEKTKGETADGDKDEIIKELKKVKKQ 49
           +A+ +TKGE   GD  E +K + K+K +
Sbjct: 140 AAMIRTKGEAGTGDVSEAVKHITKIKAE 167


>SNZ2_YEAST (P53824) Probable pyridoxin biosynthesis protein SNZ2
           (PDX1 homolog 2)
          Length = 298

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 11/28 (39%), Positives = 18/28 (64%)

Query: 22  SAIEKTKGETADGDKDEIIKELKKVKKQ 49
           +A+ +TKGE   GD  E +K + K+K +
Sbjct: 140 AAMIRTKGEAGTGDVSEAVKHITKIKAE 167


>PDX1_SUBDO (Q8WPW2) Probable pyridoxin biosynthesis SNZERR (PDX1
           homolog) (Ethylene response protein)
          Length = 306

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 12/38 (31%), Positives = 23/38 (59%)

Query: 22  SAIEKTKGETADGDKDEIIKELKKVKKQNFVTHCLLSA 59
           +A+ +TKGE   G+  E ++  +++ ++  V  CL SA
Sbjct: 153 AAMIRTKGEAGTGNVVEAVRHARQINREIRVAQCLSSA 190


>IPO9_HUMAN (Q96P70) Importin 9 (Imp9) (Ran-binding protein 9)
           (RanbP9) (HSPC273)
          Length = 1041

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 11/85 (12%)

Query: 23  AIEKTKGETAD-GDKDEIIKELKKVKKQNFVTHCLLSAMIVLTVAWQLSEVSLVMRVKDG 81
           A++   G T+D G K E++K +  + K NF  H + S   +L + W     S    V+  
Sbjct: 251 ALQIPDGPTSDSGFKMEVLKAVTALVK-NFPKHMVSSMQQILPIVWNTLTESAAFYVRTE 309

Query: 82  MNHPFRSVGNMFKEMVKDVSGSNGQ 106
           +N         + E V+D   S+G+
Sbjct: 310 VN---------YTEEVEDPVDSDGE 325


>DB73_DROME (P26802) Probable ATP-dependent RNA helicase Dbp73D
           (DEAD-box protein 73D)
          Length = 687

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 15/45 (33%), Positives = 24/45 (53%)

Query: 3   KGGETVKQSEASSPLKQVDSAIEKTKGETADGDKDEIIKELKKVK 47
           K  E V+ S+ SS  K   +  +KTK +  +  K  I K+LK ++
Sbjct: 642 KANEIVQSSKKSSETKNSKTKADKTKYQPKETKKQIIAKQLKAIE 686


>ARS2_MOUSE (Q99MR6) Arsenite-resistance protein 2
          Length = 875

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 18/52 (34%), Positives = 25/52 (47%), Gaps = 4/52 (7%)

Query: 3   KGGETVKQSEASSPLKQVDSAIEKTKGETADGD----KDEIIKELKKVKKQN 50
           K  +  ++ E     +   S  +KTK    DGD    K+E  KE KK KK+N
Sbjct: 301 KANDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEEAEKEAKKSKKRN 352


>YHAI_BACSU (O07517) Hypothetical protein yhaI
          Length = 113

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 19/52 (36%), Positives = 26/52 (49%), Gaps = 4/52 (7%)

Query: 20 VDSAIEKTKGETADGDKDEIIKELKKVKKQNFVTHCLLSAMIVLTVAWQLSE 71
          +D  + K +GE      DE+ +EL   K Q FVT   L A+     A QL+E
Sbjct: 34 IDKGLSKEEGEAVMRICDELSEELATQKAQGFVTFDKLLALF----AGQLNE 81


>KIME_ARATH (P46086) Mevalonate kinase (EC 2.7.1.36) (MK)
          Length = 378

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 18/52 (34%), Positives = 32/52 (60%), Gaps = 4/52 (7%)

Query: 22  SAIEKTKGETADGDKDEIIKELKKVKK----QNFVTHCLLSAMIVLTVAWQL 69
           +AI ++K ET+  +K+E IKEL ++ +       V+H  + A+I+ TV  +L
Sbjct: 276 AAIIQSKDETSVTEKEERIKELMEMNQGLLLSMGVSHSSIEAVILTTVKHKL 327


>CHD2_HUMAN (O14647) Chromodomain-helicase-DNA-binding protein 2
            (CHD-2)
          Length = 1739

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 32/111 (28%), Positives = 47/111 (41%), Gaps = 4/111 (3%)

Query: 10   QSEASSPLKQVDSAIEKTKGETADGDKDEIIKELKKVKKQNFVTHCLLSAMIVLTVAWQL 69
            Q+ A   LK +   +EK KG    G++ ++ K   +VKK+N V        I L+     
Sbjct: 1311 QTRADYLLKLLRKGLEK-KGAVTGGEEAKLKKRKPRVKKENKVPRLKEEHGIELSSPRHS 1369

Query: 70   SEVSLVMRVK-DGMNHPFRSVGNMFKEMV--KDVSGSNGQDAAGDKENNES 117
               S    VK DG+           KE    K+   S+ +D  GDKE  +S
Sbjct: 1370 DNPSEEGEVKDDGLEKSPMKKKQKKKENKENKEKQMSSRKDKEGDKERKKS 1420


>ADT1_GOSHI (O22342) ADP,ATP carrier protein 1, mitochondrial
           precursor (ADP/ATP translocase 1) (Adenine nucleotide
           translocator 1) (ANT 1)
          Length = 386

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 14/49 (28%), Positives = 27/49 (54%), Gaps = 6/49 (12%)

Query: 57  LSAMIVLTVAWQLSEVSLVMRVKDGM------NHPFRSVGNMFKEMVKD 99
           +SA +  T A  +  V L+++ +D M      + P++ +G+ FK  +KD
Sbjct: 95  VSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTIKD 143


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.308    0.127    0.343 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,794,723
Number of Sequences: 164201
Number of extensions: 579611
Number of successful extensions: 1661
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1649
Number of HSP's gapped (non-prelim): 22
length of query: 138
length of database: 59,974,054
effective HSP length: 99
effective length of query: 39
effective length of database: 43,718,155
effective search space: 1705008045
effective search space used: 1705008045
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 60 (27.7 bits)


Medicago: description of AC147538.1