BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147537.14 - phase: 0
(176 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DSDC_ECOLI (P46068) HTH-type transcriptional regulator dsdC (D-s... 35 0.068
TAL_LACPL (Q88S98) Probable transaldolase (EC 2.2.1.2) 32 0.98
RL24_HALN1 (Q9HPC3) 50S ribosomal protein L24P 31 1.3
FMR4_APLCA (P08022) FMRFamide neuropeptides type FMRF-4 precurso... 31 1.3
FMR2_APLCA (P08021) FMRFamide neuropeptides type FMRF-2 precursor 31 1.3
RISB_BORPE (Q7VTN4) 6,7-dimethyl-8-ribityllumazine synthase (EC ... 31 1.7
RISB_BORPA (Q7W143) 6,7-dimethyl-8-ribityllumazine synthase (EC ... 31 1.7
RISB_BORBR (Q7WNT3) 6,7-dimethyl-8-ribityllumazine synthase (EC ... 31 1.7
MYHB_MOUSE (O08638) Myosin heavy chain, smooth muscle isoform (S... 31 1.7
MYHB_RAT (Q63862) Myosin heavy chain, smooth muscle isoform (SMM... 30 2.9
CYB_CEPNE (Q34179) Cytochrome b 30 2.9
MYHB_CHICK (P10587) Myosin heavy chain, gizzard smooth muscle 30 3.7
MYHB_RABIT (P35748) Myosin heavy chain, smooth muscle isoform (S... 29 4.9
EXG_SACBA (Q876J3) Glucan 1,3-beta-glucosidase precursor (EC 3.2... 29 4.9
EXG1_YEAST (P23776) Glucan 1,3-beta-glucosidase I/II precursor (... 29 4.9
DNAK_TETHA (Q93R27) Chaperone protein dnaK (Heat shock protein 7... 29 4.9
YG44_SCHPO (O60179) Hypothetical protein C23E6.04c in chromosome II 29 6.4
XERD_STRMT (Q9EUR3) Tyrosine recombinase xerD 29 6.4
URE1_SYNY3 (P73061) Urease alpha subunit (EC 3.5.1.5) (Urea amid... 29 6.4
RPOP_PODAN (Q01521) Probable DNA-directed RNA polymerase (EC 2.7... 29 6.4
>DSDC_ECOLI (P46068) HTH-type transcriptional regulator dsdC
(D-serine deaminase activator)
Length = 311
Score = 35.4 bits (80), Expect = 0.068
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 14/89 (15%)
Query: 1 MEAWN-SERHAFEIGSGEIGFSLLDVALILGIPVVGHRVELAEEQLFSELEEEYGASRAK 59
+ W S+ H FE+ + F+L L L V HR+ EE+L +L R+
Sbjct: 12 LNGWQLSKMHTFEVAARHQSFALAAEELSLSPSAVSHRINQLEEELGIQL-----FVRSH 66
Query: 60 RKVAMT--------SLEARLDSIGEDVSD 80
RKV +T +L++ LD++ +++ D
Sbjct: 67 RKVELTHEGKRVYWALKSSLDTLNQEILD 95
>TAL_LACPL (Q88S98) Probable transaldolase (EC 2.2.1.2)
Length = 217
Score = 31.6 bits (70), Expect = 0.98
Identities = 32/97 (32%), Positives = 47/97 (47%), Gaps = 10/97 (10%)
Query: 41 AEEQLFSELEEEYGASRAKRKVAMTS--LEARLDSIGEDVSDDFVRSFLLFTIGTFLSSI 98
AEE + E AS K+ MT L+A GE + + L+F++ L +
Sbjct: 63 AEEMIAQARNEIKWASNIVVKIPMTEEGLKAVKVLSGEGIKTNVT---LVFSVSQGL--L 117
Query: 99 DGKVDSRYLS-FLGNLDDVSGFAWGAAVIEDLCQWLD 134
K + Y+S FLG LDD+ G G +++DL Q LD
Sbjct: 118 AAKAGATYISPFLGRLDDIGGN--GIQLVKDLRQVLD 152
>RL24_HALN1 (Q9HPC3) 50S ribosomal protein L24P
Length = 118
Score = 31.2 bits (69), Expect = 1.3
Identities = 26/77 (33%), Positives = 34/77 (43%), Gaps = 8/77 (10%)
Query: 37 RVELAEEQ------LFSELEEEYGASRAKRKVAMTSLEARLDSIGED--VSDDFVRSFLL 88
R L E+Q L EL EEYG + V T R D GED V+D +R +
Sbjct: 14 RASLHEKQDQVRATLSEELREEYGQRNVRVNVGDTVEVMRGDDAGEDGEVTDVDLRDAEV 73
Query: 89 FTIGTFLSSIDGKVDSR 105
F G + + DG+ R
Sbjct: 74 FVEGVTVEAADGEETPR 90
>FMR4_APLCA (P08022) FMRFamide neuropeptides type FMRF-4 precursor
(Fragment)
Length = 196
Score = 31.2 bits (69), Expect = 1.3
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 12/73 (16%)
Query: 67 LEARLDSIGEDVSDDFVRSFLLFTIGTFLSSIDGKVDSRYLSFLGNLDDVSG---FAWGA 123
++ R G+ V DD + F+ F S+DG VD R++ F ++DD +G
Sbjct: 60 VDKRFMRFGKSVDDDVDKRFMRFG-----KSVDGDVDKRFMRFGKSVDDAVDKRFMRFGK 114
Query: 124 AVIEDLCQWLDKR 136
+V D LDKR
Sbjct: 115 SVDSD----LDKR 123
>FMR2_APLCA (P08021) FMRFamide neuropeptides type FMRF-2 precursor
Length = 552
Score = 31.2 bits (69), Expect = 1.3
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 12/73 (16%)
Query: 67 LEARLDSIGEDVSDDFVRSFLLFTIGTFLSSIDGKVDSRYLSFLGNLDDVSG---FAWGA 123
++ R G+ V DD + F+ F S+DG VD R++ F ++DD +G
Sbjct: 285 VDKRFMRFGKSVDDDVDKRFMRFG-----KSVDGDVDKRFMRFGKSVDDAVDKRFMRFGK 339
Query: 124 AVIEDLCQWLDKR 136
+V D LDKR
Sbjct: 340 SVDSD----LDKR 348
>RISB_BORPE (Q7VTN4) 6,7-dimethyl-8-ribityllumazine synthase (EC
2.5.1.9) (DMRL synthase) (Lumazine synthase) (Riboflavin
synthase beta chain)
Length = 173
Score = 30.8 bits (68), Expect = 1.7
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 7 ERHAFEIGSGEIGFSLLDVALILGIPVVGHRVELAEEQLFSELEEEYGASRAKRKVAMTS 66
E + FE+ S E ++ +AL GIPV + + ++ GA A+ V M +
Sbjct: 87 ETYHFEVVSNESAAAISRIALETGIPVANGVLTVDTDEQAQARAAGKGADCAQVAVEMAN 146
Query: 67 LEARLDSIGEDVSDD 81
L A L+ +D D+
Sbjct: 147 LAAALEPEEDDEDDE 161
>RISB_BORPA (Q7W143) 6,7-dimethyl-8-ribityllumazine synthase (EC
2.5.1.9) (DMRL synthase) (Lumazine synthase) (Riboflavin
synthase beta chain)
Length = 175
Score = 30.8 bits (68), Expect = 1.7
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 7 ERHAFEIGSGEIGFSLLDVALILGIPVVGHRVELAEEQLFSELEEEYGASRAKRKVAMTS 66
E + FE+ S E ++ +AL GIPV + + ++ GA A+ V M +
Sbjct: 87 ETYHFEVVSNESAAAISRIALETGIPVANGVLTVDTDEQAQARAAGKGADCAQVAVEMAN 146
Query: 67 LEARLDSIGEDVSDD 81
L A L+ +D +D
Sbjct: 147 LAAALEPEEDDEDED 161
>RISB_BORBR (Q7WNT3) 6,7-dimethyl-8-ribityllumazine synthase (EC
2.5.1.9) (DMRL synthase) (Lumazine synthase) (Riboflavin
synthase beta chain)
Length = 175
Score = 30.8 bits (68), Expect = 1.7
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 7 ERHAFEIGSGEIGFSLLDVALILGIPVVGHRVELAEEQLFSELEEEYGASRAKRKVAMTS 66
E + FE+ S E ++ +AL GIPV + + ++ GA A+ V M +
Sbjct: 87 ETYHFEVVSNESAAAISRIALETGIPVANGVLTVDTDEQAQARAAGKGADCAQVAVEMAN 146
Query: 67 LEARLDSIGEDVSDD 81
L A L+ +D +D
Sbjct: 147 LAAALEPEEDDEDED 161
>MYHB_MOUSE (O08638) Myosin heavy chain, smooth muscle isoform (SMMHC)
Length = 1972
Score = 30.8 bits (68), Expect = 1.7
Identities = 15/45 (33%), Positives = 28/45 (61%)
Query: 37 RVELAEEQLFSELEEEYGASRAKRKVAMTSLEARLDSIGEDVSDD 81
++E ++L S+L+E GA +AK K + +LEA++ + E V +
Sbjct: 1789 QLERQNKELRSKLQEVEGAVKAKLKSTVAALEAKIAQLEEQVEQE 1833
>MYHB_RAT (Q63862) Myosin heavy chain, smooth muscle isoform (SMMHC)
(Fragments)
Length = 1327
Score = 30.0 bits (66), Expect = 2.9
Identities = 14/45 (31%), Positives = 28/45 (62%)
Query: 37 RVELAEEQLFSELEEEYGASRAKRKVAMTSLEARLDSIGEDVSDD 81
++E ++L S+L+E GA +AK K + +LEA++ + E + +
Sbjct: 1144 QLERQNKELRSKLQEVEGAVKAKLKSTVAALEAKIVQLEEQIEQE 1188
>CYB_CEPNE (Q34179) Cytochrome b
Length = 380
Score = 30.0 bits (66), Expect = 2.9
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 121 WGAAVIEDLCQWLDKRKDNNVQYVGGCLIFLQVSLICLSYYHYLLLNCIL 170
WGA VI +L + D+ V +V GC Q +L +H+LL IL
Sbjct: 137 WGATVITNLLSAVPYLGDSLVTWVWGCFSVNQATLNRFYSFHFLLPFVIL 186
>MYHB_CHICK (P10587) Myosin heavy chain, gizzard smooth muscle
Length = 1978
Score = 29.6 bits (65), Expect = 3.7
Identities = 14/45 (31%), Positives = 29/45 (64%)
Query: 37 RVELAEEQLFSELEEEYGASRAKRKVAMTSLEARLDSIGEDVSDD 81
++E ++L S+L+E GA ++K K + +LEA++ S+ E + +
Sbjct: 1794 QLERQNKELRSKLQEMEGAVKSKFKSTIAALEAKIASLEEQLEQE 1838
>MYHB_RABIT (P35748) Myosin heavy chain, smooth muscle isoform (SMMHC)
Length = 1972
Score = 29.3 bits (64), Expect = 4.9
Identities = 14/45 (31%), Positives = 28/45 (62%)
Query: 37 RVELAEEQLFSELEEEYGASRAKRKVAMTSLEARLDSIGEDVSDD 81
++E ++L S+L+E GA ++K K + +LEA++ + E V +
Sbjct: 1789 QLERQNKELKSKLQEMEGAVKSKFKSTIAALEAKIAQLEEQVEQE 1833
>EXG_SACBA (Q876J3) Glucan 1,3-beta-glucosidase precursor (EC
3.2.1.58) (Exo-1,3-beta-glucanase)
Length = 448
Score = 29.3 bits (64), Expect = 4.9
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 104 SRYLSFLGNLDDVSGFAWGAAVIEDLCQWLDKRKDNNVQYV 144
+RY N D+ S + A +D+ W D+RK+N +YV
Sbjct: 353 ARYDGSWVNGDETSTYIGSCANNDDITSWSDQRKENTRRYV 393
>EXG1_YEAST (P23776) Glucan 1,3-beta-glucosidase I/II precursor (EC
3.2.1.58) (Exo-1,3-beta-glucanase I/II) (Soluble cell
wall protein 6)
Length = 448
Score = 29.3 bits (64), Expect = 4.9
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 104 SRYLSFLGNLDDVSGFAWGAAVIEDLCQWLDKRKDNNVQYV 144
+RY N D S + A +D+ W D+RK+N +YV
Sbjct: 353 ARYDGSWVNGDQTSSYIGSCANNDDIAYWSDERKENTRRYV 393
>DNAK_TETHA (Q93R27) Chaperone protein dnaK (Heat shock protein 70)
(Heat shock 70 kDa protein) (HSP70)
Length = 618
Score = 29.3 bits (64), Expect = 4.9
Identities = 18/43 (41%), Positives = 22/43 (50%)
Query: 87 LLFTIGTFLSSIDGKVDSRYLSFLGNLDDVSGFAWGAAVIEDL 129
LLFT+ LS +DGKVD + N D A A IED+
Sbjct: 513 LLFTVDKTLSDLDGKVDEEEVKKAENARDELKAAVEADDIEDM 555
>YG44_SCHPO (O60179) Hypothetical protein C23E6.04c in chromosome II
Length = 1649
Score = 28.9 bits (63), Expect = 6.4
Identities = 21/42 (50%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 73 SIGEDVSDDFVRSFLLFTIGTFLSSIDG--KVDSRYLSFLGN 112
SI E VSD+F+ SFL F F + I G K SR L FL N
Sbjct: 122 SIHEYVSDEFILSFLPFHDHPFFARILGCSKPKSRPLLFLEN 163
>XERD_STRMT (Q9EUR3) Tyrosine recombinase xerD
Length = 244
Score = 28.9 bits (63), Expect = 6.4
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 49 LEEEYGASRAKRKVAMTSLEARLDSIGEDVSDDFVRSFLLFTIGTFLSSIDGKVD--SRY 106
LEE++G S ++ LE LD +GE +SD ++ + +S+ K+ +++
Sbjct: 9 LEEKHGLSANSKQSYKYDLEQCLDIVGERISDTSLKIYQAQLANLKISAQKRKISGCNQF 68
Query: 107 LSFLGNLDDVSGF 119
L FL + ++ F
Sbjct: 69 LYFLYHKGEMDSF 81
>URE1_SYNY3 (P73061) Urease alpha subunit (EC 3.5.1.5) (Urea
amidohydrolase)
Length = 569
Score = 28.9 bits (63), Expect = 6.4
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 32 PVVGHRVELAEEQLFSELEEEY 53
P VG +V LA+ +LF E+E++Y
Sbjct: 16 PTVGDKVRLADTELFIEVEQDY 37
>RPOP_PODAN (Q01521) Probable DNA-directed RNA polymerase (EC
2.7.7.6)
Length = 948
Score = 28.9 bits (63), Expect = 6.4
Identities = 29/97 (29%), Positives = 40/97 (40%), Gaps = 14/97 (14%)
Query: 79 SDDFVRSFLLFTIGTFLSSIDGKVDSRYLSFLGNLDDVSGFAWGAAVIEDLCQWLDKRKD 138
S D +S LLF+ + D + YL G S F D +W+DK +
Sbjct: 495 STDLAKSLLLFSKPGRMYKKD-YIALSYLKIYGG----SSFGLDKLSANDRIKWVDKNLN 549
Query: 139 NNVQYVGGCLI------FLQVSLICLSYYHYLLLNCI 169
N Y G LI FL ++ C+ Y Y LNC+
Sbjct: 550 NIKNYRNGKLIKEAKNKFLFLA-FCIEYNRY--LNCL 583
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.324 0.142 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,437,199
Number of Sequences: 164201
Number of extensions: 810190
Number of successful extensions: 2233
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 2208
Number of HSP's gapped (non-prelim): 34
length of query: 176
length of database: 59,974,054
effective HSP length: 103
effective length of query: 73
effective length of database: 43,061,351
effective search space: 3143478623
effective search space used: 3143478623
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)
Medicago: description of AC147537.14