BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147497.8 - phase: 0
(609 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YLE1_SCHPO (Q10451) Hypothetical protein C1093.01 in chromosome I 89 4e-17
LPRC_HUMAN (P42704) 130 kDa leucine-rich protein (LRP 130) (GP13... 65 4e-10
PT09_YEAST (P32522) PET309 protein, mitochondrial precursor 42 0.006
YG3M_YEAST (P48237) Hypothetical 101.4 kDa protein in RPL24B-RSR... 39 0.040
POLB_MAIZE (P15718) Retrovirus-related Pol polyprotein from tran... 35 0.44
RPOM_HUMAN (O00411) DNA-directed RNA polymerase, mitochondrial p... 35 0.57
YC20_METJA (Q58617) Hypothetical adenine-specific methylase MJ12... 33 1.7
YZ18_METJA (Q60278) Hypothetical protein MJECL18 32 6.3
RPOM_MOUSE (Q8BKF1) DNA-directed RNA polymerase, mitochondrial p... 32 6.3
NIH2_MASLA (Q47921) Nitrogenase iron protein 2 (EC 1.18.6.1) (Ni... 32 6.3
KPC4_DROME (P83099) Putative protein kinase C, delta type homolo... 32 6.3
YZ19_METJA (Q60279) Hypothetical protein MJECL19 31 8.3
Y391_HUMAN (O15091) Hypothetical protein KIAA0391 31 8.3
OPSP_PETMA (O42490) Pineal opsin (P-opsin) (Pineal gland-specifi... 31 8.3
OPS4_CANAL (P46596) Opaque-phase-specific protein OP4 precursor 31 8.3
LE21_DEIRA (Q9RTY9) 3-isopropylmalate dehydratase large subunit ... 31 8.3
>YLE1_SCHPO (Q10451) Hypothetical protein C1093.01 in chromosome I
Length = 1261
Score = 88.6 bits (218), Expect = 4e-17
Identities = 71/323 (21%), Positives = 143/323 (43%), Gaps = 16/323 (4%)
Query: 87 FIHSFSTSTTFHNNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQ 146
F H + ST + +D A+++F R N P + +L L +++ LFQ
Sbjct: 891 FAHLINNSTRRGDTDDATTALNIFEETKRHNVKPSVFLYNAVLSKLGRARRTTECWKLFQ 950
Query: 147 KMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKM-GYEPDTITLNTFIKGFCLK 205
+M+ G+ P V + +IN C++G A + A++ Y+P NT I+ F ++
Sbjct: 951 EMKESGLLPTSVTYGTVINAACRIGDESLAEKLFAEMENQPNYQPRVAPYNTMIQ-FEVQ 1009
Query: 206 GQIH--QALNFHDKLVALGFHLDQVSYGTLINGL-----CKVGETRAALELLRRVDGKLV 258
+ +AL ++++L A +Y L++ VG +A LEL+ R D ++
Sbjct: 1010 TMFNREKALFYYNRLCATDIEPSSHTYKLLMDAYGTLKPVNVGSVKAVLELMERTDVPIL 1069
Query: 259 QLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIV----TYSALISGFCIVGKLK 314
+ Y I+ ++ D V A Y +++ + I + + I ++
Sbjct: 1070 SMHYAAYIHILGNVVSD--VQAATSCYMNALAKHDAGEIQLDANLFQSQIESLIANDRIV 1127
Query: 315 DAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIK-PDIVTYNSL 373
+ I + + M N++ + Y N L+ F K G + +A+ ++ +G+ + TY ++
Sbjct: 1128 EGIQIVSDMKRYNVSLNAYIVNALIKGFTKVGMISKARYYFDLLECEGMSGKEPSTYENM 1187
Query: 374 MDGYCLVNEVNMAKSILNTMSHR 396
+ Y VN+ A I+ + +
Sbjct: 1188 VRAYLSVNDGRKAMEIVEQLKRK 1210
Score = 60.1 bits (144), Expect = 2e-08
Identities = 75/355 (21%), Positives = 133/355 (37%), Gaps = 48/355 (13%)
Query: 193 ITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGET---RAALEL 249
+ L+ I Q + F D + LG+ ++ LIN + G+T AL +
Sbjct: 854 LILDAMILSSSFARQFKSSNLFCDNMKMLGYIPRASTFAHLINNSTRRGDTDDATTALNI 913
Query: 250 LRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCI 309
V+ V +Y+ ++ + + + + + L+ EM + VTY +I+ C
Sbjct: 914 FEETKRHNVKPSVFLYNAVLSKLGRARRTTECWKLFQEMKESGLLPTSVTYGTVINAACR 973
Query: 310 VGKLKDAIGLFNKMTSE-NINPDVYTFNILVDAFCKEGRVKE-AKNGLAMMMKQGIKPDI 367
+G A LF +M ++ N P V +N ++ + +E A + I+P
Sbjct: 974 IGDESLAEKLFAEMENQPNYQPRVAPYNTMIQFEVQTMFNREKALFYYNRLCATDIEPSS 1033
Query: 368 VTYNSLMDGYCLVNEVNMA--KSILNTMSHRGVTATVRSY--------NIV--------- 408
TY LMD Y + VN+ K++L M V Y N+V
Sbjct: 1034 HTYKLLMDAYGTLKPVNVGSVKAVLELMERTDVPILSMHYAAYIHILGNVVSDVQAATSC 1093
Query: 409 -----------------------INGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLID 445
I + + +++ +M + N N+LI
Sbjct: 1094 YMNALAKHDAGEIQLDANLFQSQIESLIANDRIVEGIQIVSDMKRYNVSLNAYIVNALIK 1153
Query: 446 GLCKSGRISYALELIDLMHDRGQQ-PDIITYSSILDALCKNHLVDKAIALLIKLK 499
G K G IS A DL+ G + TY +++ A + KA+ ++ +LK
Sbjct: 1154 GFTKVGMISKARYYFDLLECEGMSGKEPSTYENMVRAYLSVNDGRKAMEIVEQLK 1208
Score = 55.1 bits (131), Expect = 5e-07
Identities = 47/206 (22%), Positives = 95/206 (45%), Gaps = 9/206 (4%)
Query: 319 LFNKMTSENINPDVYTFNILVDAFCKEG---RVKEAKNGLAMMMKQ-GIKPDIVTYNSLM 374
L+ K++++++ + +++DA R ++ N MK G P T+ L+
Sbjct: 836 LYRKISTKSLEKANWFMALILDAMILSSSFARQFKSSNLFCDNMKMLGYIPRASTFAHLI 895
Query: 375 DGYCLVNEVNMAKSILNTMSH---RGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHK 431
+ + + A + LN V +V YN V++ + + + KLF+EM
Sbjct: 896 NNSTRRGDTDDATTALNIFEETKRHNVKPSVFLYNAVLSKLGRARRTTECWKLFQEMKES 955
Query: 432 QIFPNVITYNSLIDGLCKSGRISYALELIDLMHDR-GQQPDIITYSSILDALCKNHL-VD 489
+ P +TY ++I+ C+ G S A +L M ++ QP + Y++++ + +
Sbjct: 956 GLLPTSVTYGTVINAACRIGDESLAEKLFAEMENQPNYQPRVAPYNTMIQFEVQTMFNRE 1015
Query: 490 KAIALLIKLKDQGIRPNMYTYTILID 515
KA+ +L I P+ +TY +L+D
Sbjct: 1016 KALFYYNRLCATDIEPSSHTYKLLMD 1041
Score = 39.7 bits (91), Expect = 0.023
Identities = 29/109 (26%), Positives = 47/109 (42%), Gaps = 3/109 (2%)
Query: 498 LKDQGIRPNMYTYTILIDGLCKGGRLEDAR---NIFEDLLVKGYNLTVNTYTVMIQGFCS 554
+K G P T+ LI+ + G +DA NIFE+ +V Y ++
Sbjct: 879 MKMLGYIPRASTFAHLINNSTRRGDTDDATTALNIFEETKRHNVKPSVFLYNAVLSKLGR 938
Query: 555 HGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREM 603
E L +MK++ +P ++TY +I + + AEKL EM
Sbjct: 939 ARRTTECWKLFQEMKESGLLPTSVTYGTVINAACRIGDESLAEKLFAEM 987
>LPRC_HUMAN (P42704) 130 kDa leucine-rich protein (LRP 130) (GP130)
(Leucine-rich PPR-motif containing protein)
Length = 1273
Score = 65.5 bits (158), Expect = 4e-10
Identities = 66/338 (19%), Positives = 141/338 (41%), Gaps = 7/338 (2%)
Query: 261 DVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLF 320
DV Y+ ++ +++ D ++M I N VTY LI+ +C VG ++ A +
Sbjct: 40 DVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKIL 99
Query: 321 NKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLV 380
M ++++ F+ LV + G ++ A+N L +M GI+P TY +L++ Y
Sbjct: 100 GFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEK 159
Query: 381 NEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMH-HKQIFPNVIT 439
+++ K L + + R +I F K + + K +K+ ++ P+ +
Sbjct: 160 GDIDHVKQTLEKVEKFELHLMDRDLLQIIFSFSKAGYLSMSQKFWKKFTCERRYIPDAM- 218
Query: 440 YNSLIDGLCKSGRISYALE-LIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKL 498
+LI L AL+ L+ + P + + + N V+K KL
Sbjct: 219 --NLILLLVTEKLEDVALQILLACPVSKEDGPSVFGSFFLQHCVTMNTPVEKLTDYCKKL 276
Query: 499 KDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLF 558
K+ ++ + + + + + A+ + + + +G+ + + + ++ G
Sbjct: 277 KE--VQMHSFPLQFTLHCALLANKTDLAKALMKAVKEEGFPIRPHYFWPLLVGRRKEKNV 334
Query: 559 DEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKA 596
+ +L M++ PD TY + FD + +A
Sbjct: 335 QGIIEILKGMQELGVHPDQETYTDYVIPCFDSVNSARA 372
Score = 60.5 bits (145), Expect = 1e-08
Identities = 39/162 (24%), Positives = 73/162 (44%)
Query: 442 SLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQ 501
SL+ L R +A + D + G D+ Y+++L +N L K+++
Sbjct: 11 SLLPELKLEERTEFAHRIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEA 70
Query: 502 GIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEA 561
I+PN TY LI C G +E A I + K +T ++ ++ G G + A
Sbjct: 71 NIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENA 130
Query: 562 LSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREM 603
++L+ M+D P TY ++ + +K + D ++ L ++
Sbjct: 131 ENILTVMRDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKV 172
Score = 54.3 bits (129), Expect = 9e-07
Identities = 44/214 (20%), Positives = 83/214 (38%), Gaps = 1/214 (0%)
Query: 372 SLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHK 431
SL+ L A I +T+ G V YN ++ + + + +M
Sbjct: 11 SLLPELKLEERTEFAHRIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEA 70
Query: 432 QIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKA 491
I PN +TY LI C G I A +++ M + +S+++ + ++ A
Sbjct: 71 NIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENA 130
Query: 492 IALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQG 551
+L ++D GI P TY L++ + G ++ + E + +L +I
Sbjct: 131 ENILTVMRDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKVEKFELHLMDRDLLQIIFS 190
Query: 552 FCSHGLFDEALSLLSKMK-DNSCIPDAITYEIII 584
F G + K + IPDA+ +++
Sbjct: 191 FSKAGYLSMSQKFWKKFTCERRYIPDAMNLILLL 224
Score = 47.0 bits (110), Expect = 1e-04
Identities = 32/145 (22%), Positives = 63/145 (43%)
Query: 216 DKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKD 275
D L LG D Y L+ + + + L +++ +Q + V Y +I S C
Sbjct: 30 DTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNV 89
Query: 276 KNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTF 335
++ A + M ++ + +SAL++G G +++A + M I P T+
Sbjct: 90 GDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIEPGPDTY 149
Query: 336 NILVDAFCKEGRVKEAKNGLAMMMK 360
L++A+ ++G + K L + K
Sbjct: 150 LALLNAYAEKGDIDHVKQTLEKVEK 174
Score = 43.9 bits (102), Expect = 0.001
Identities = 66/351 (18%), Positives = 134/351 (37%), Gaps = 56/351 (15%)
Query: 127 QILGSLVKSKHYHTVLSLFQKMEYR-------------GIKPNFVNFNILINCFCQLGLI 173
Q LG++ HY+ +L ++ + EY+ I+PN V + LI +C +G I
Sbjct: 33 QKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDI 92
Query: 174 PFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTL 233
A +L + + + G G + A N + G +Y L
Sbjct: 93 EGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIEPGPDTYLAL 152
Query: 234 INGLCKVGE---TRAALELLRRVDGKLVQLDVVM---------YSTIIDSM-----CKDK 276
+N + G+ + LE + + + L+ D++ Y ++ C+ +
Sbjct: 153 LNAYAEKGDIDHVKQTLEKVEKFELHLMDRDLLQIIFSFSKAGYLSMSQKFWKKFTCERR 212
Query: 277 NVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFN 336
+ DA +L +V+ ++ V L++ C V K +D +F ++ T N
Sbjct: 213 YIPDAMNLILLLVTEKLED--VALQILLA--CPVSK-EDGPSVFGSFFLQH----CVTMN 263
Query: 337 ILVDA---FCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTM 393
V+ +CK ++KE ++ + L N+ ++AK+++ +
Sbjct: 264 TPVEKLTDYCK--KLKE------------VQMHSFPLQFTLHCALLANKTDLAKALMKAV 309
Query: 394 SHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLI 444
G + ++ G K K V +++ K M + P+ TY +
Sbjct: 310 KEEGFPIRPHYFWPLLVGRRKEKNVQGIIEILKGMQELGVHPDQETYTDYV 360
Score = 41.6 bits (96), Expect = 0.006
Identities = 33/145 (22%), Positives = 64/145 (43%), Gaps = 8/145 (5%)
Query: 469 QPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARN 528
QP ++ LC + KA+ L K + + Y LI+ C+ ++EDA N
Sbjct: 555 QPIRDVLKQLILVLCSEENMQKALELKAKYESDMVTGG---YAALINLCCRHDKVEDALN 611
Query: 529 IFE--DLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCI---PDAITYEII 583
+ E D L L Y +++ HG +A+ +L +MK+ + A+++ +
Sbjct: 612 LKEEFDRLDSSAVLDTGNYLGLVRVLAKHGKLQDAIKILKEMKEKDVLIKDTTALSFFHM 671
Query: 584 ICSLFDKDENDKAEKLLREMITRGL 608
+ + E + ++L ++T GL
Sbjct: 672 LNGAALRGEIETVKQLHEAIVTLGL 696
Score = 38.5 bits (88), Expect = 0.052
Identities = 28/139 (20%), Positives = 59/139 (42%)
Query: 175 FAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLI 234
FA + + K+G D N +K + +F K+ ++V+Y LI
Sbjct: 24 FAHRIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLI 83
Query: 235 NGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRIS 294
C VG+ A ++L + K + + ++S ++ + ++ +A ++ + M I
Sbjct: 84 ASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIE 143
Query: 295 SNIVTYSALISGFCIVGKL 313
TY AL++ + G +
Sbjct: 144 PGPDTYLALLNAYAEKGDI 162
Score = 36.2 bits (82), Expect = 0.26
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Query: 233 LINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRR 292
LI LC + ALEL + + +V Y+ +I+ C+ V DA +L E R
Sbjct: 564 LILVLCSEENMQKALELKAKYESDMVTGG---YAALINLCCRHDKVEDALNLKEEF--DR 618
Query: 293 ISSNIV----TYSALISGFCIVGKLKDAIGLFNKMTSENI 328
+ S+ V Y L+ GKL+DAI + +M +++
Sbjct: 619 LDSSAVLDTGNYLGLVRVLAKHGKLQDAIKILKEMKEKDV 658
Score = 34.3 bits (77), Expect = 0.97
Identities = 22/87 (25%), Positives = 43/87 (49%)
Query: 522 RLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYE 581
R E A I++ L G V+ Y +++ + + L+KM++ + P+ +TY+
Sbjct: 21 RTEFAHRIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQ 80
Query: 582 IIICSLFDKDENDKAEKLLREMITRGL 608
+I S + + + A K+L M T+ L
Sbjct: 81 RLIASYCNVGDIEGASKILGFMKTKDL 107
Score = 33.5 bits (75), Expect = 1.7
Identities = 74/385 (19%), Positives = 137/385 (35%), Gaps = 88/385 (22%)
Query: 182 KILKMGYEPDTITLNT-------FIKGFCLKGQIHQALNFHDKLVALGF----------- 223
KILK E D + +T + G L+G+I H+ +V LG
Sbjct: 648 KILKEMKEKDVLIKDTTALSFFHMLNGAALRGEIETVKQLHEAIVTLGLAEPSTNISFPL 707
Query: 224 ---HLDQVSYGTLI-----------------NGLCKV---GET---RAALELLRRVDGKL 257
HL++ T + + LCK+ GET + A++ + + G++
Sbjct: 708 VTVHLEKGDLSTALEVAIDCYEKYKVLPRIHDVLCKLVEKGETDLIQKAMDFVSQEQGEM 767
Query: 258 VQLDVVMYS-----------TIIDS---------------MCKDKNVNDAFDLYSEMVSR 291
V L + ++ II++ C N + + E+ +
Sbjct: 768 VMLYDLFFAFLQTGNYKEAKKIIETPGIRARSARLQWFCDRCVANNQVETLEKLVELTQK 827
Query: 292 RISSNI-VTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGR--- 347
+ Y L+ + I G + A ++NK+ EN+ P T +L + +EG
Sbjct: 828 LFECDRDQMYYNLLKLYKINGDWQRADAVWNKIQEENVIPREKTLRLLAE-ILREGNQEV 886
Query: 348 --------VKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVT 399
++ K+ L +PD + + C +N+ A I + +
Sbjct: 887 PFDVPELWYEDEKHSLNSSSASTTEPD---FQKDILIACRLNQKKGAYDIFLNAKEQNIV 943
Query: 400 ATVRSYNIVINGFCKIKMVDQAM--KLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYAL 457
+Y+ +I QAM K F E H K N + LI + + A+
Sbjct: 944 FNAETYSNLIKLLMSEDYFTQAMEVKAFAETHIKGFTLNDAANSRLIITQVRRDYLKEAV 1003
Query: 458 ELIDLMHDRGQQPDIITYSSILDAL 482
+ + D+ Q P + + ++ AL
Sbjct: 1004 TTLKTVLDQQQTPSRLAVTRVIQAL 1028
>PT09_YEAST (P32522) PET309 protein, mitochondrial precursor
Length = 965
Score = 41.6 bits (96), Expect = 0.006
Identities = 56/280 (20%), Positives = 115/280 (41%), Gaps = 11/280 (3%)
Query: 320 FNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCL 379
FN + P + + IL+ + G + ++++G+ P SL+ +
Sbjct: 334 FNALFGIGKLPSIQHYGILMYTMARIGELDSVNKLYTQLLRRGMIPTYAVLQSLLYAHYK 393
Query: 380 VNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNV-I 438
V + S +T + ++ I++ + + +D A ++ K + P+V I
Sbjct: 394 VGDFAACFSHFELFKKYDITPSTATHTIMLKVYRGLNDLDGAFRILKRLSED---PSVEI 450
Query: 439 T---YNSLIDGLCKSGRISYALELIDLMHDRGQ-QPDIITYSSILDALCKNHLVDKAIAL 494
T + LI CK+ A EL +LM + Q + S+++D +++ +AIAL
Sbjct: 451 TEGHFALLIQMCCKTTNHLIAQELFNLMTEHYNIQHTGKSISALMDVYIESNRPTEAIAL 510
Query: 495 LIK-LKDQGIRPNMYT-YTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGF 552
K K+ R + + Y I +F+ + + Y +MI+
Sbjct: 511 FEKHSKNLSWRDGLISVYNKAIKAYIGLRNANKCEELFDKITTSKLAVNSEFYKMMIKFL 570
Query: 553 CS-HGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKD 591
+ + + ALS++ ++ +S I T+ II +DK+
Sbjct: 571 VTLNEDCETALSIIDQLIKHSVIKVDATHFEIIMEAYDKE 610
Score = 40.8 bits (94), Expect = 0.010
Identities = 45/223 (20%), Positives = 91/223 (40%), Gaps = 6/223 (2%)
Query: 391 NTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKS 450
N + G +++ Y I++ +I +D KL+ ++ + + P SL+ K
Sbjct: 335 NALFGIGKLPSIQHYGILMYTMARIGELDSVNKLYTQLLRRGMIPTYAVLQSLLYAHYKV 394
Query: 451 GRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKL-KDQGIRPNMYT 509
G + +L P T++ +L + +D A +L +L +D +
Sbjct: 395 GDFAACFSHFELFKKYDITPSTATHTIMLKVYRGLNDLDGAFRILKRLSEDPSVEITEGH 454
Query: 510 YTILIDGLCKGGRLEDARNIFEDLLVKGYNL--TVNTYTVMIQGFCSHGLFDEALSLLSK 567
+ +LI CK A+ +F +L+ + YN+ T + + ++ + EA++L K
Sbjct: 455 FALLIQMCCKTTNHLIAQELF-NLMTEHYNIQHTGKSISALMDVYIESNRPTEAIALFEK 513
Query: 568 MKDNSCIPDAI--TYEIIICSLFDKDENDKAEKLLREMITRGL 608
N D + Y I + +K E+L ++ T L
Sbjct: 514 HSKNLSWRDGLISVYNKAIKAYIGLRNANKCEELFDKITTSKL 556
Score = 36.2 bits (82), Expect = 0.26
Identities = 60/313 (19%), Positives = 114/313 (36%), Gaps = 10/313 (3%)
Query: 110 FNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQ 169
FN L P +G ++ ++ + +V L+ ++ RG+ P + L+ +
Sbjct: 334 FNALFGIGKLPSIQHYGILMYTMARIGELDSVNKLYTQLLRRGMIPTYAVLQSLLYAHYK 393
Query: 170 LGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVA-LGFHLDQV 228
+G FS K P T T +K + + A +L + +
Sbjct: 394 VGDFAACFSHFELFKKYDITPSTATHTIMLKVYRGLNDLDGAFRILKRLSEDPSVEITEG 453
Query: 229 SYGTLINGLCKVGETRAALELLR-RVDGKLVQLDVVMYSTIIDSMCKDKNVNDA---FDL 284
+ LI CK A EL + +Q S ++D + +A F+
Sbjct: 454 HFALLIQMCCKTTNHLIAQELFNLMTEHYNIQHTGKSISALMDVYIESNRPTEAIALFEK 513
Query: 285 YSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSEN--INPDVYTFNILVDAF 342
+S+ +S R I Y+ I + + LF+K+T+ +N + Y I
Sbjct: 514 HSKNLSWR-DGLISVYNKAIKAYIGLRNANKCEELFDKITTSKLAVNSEFYKMMIKFLVT 572
Query: 343 CKEGRVKEAKNGLAMMMKQG-IKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTAT 401
E + A + + ++K IK D + +M+ Y + ++ TMS V A
Sbjct: 573 LNED-CETALSIIDQLIKHSVIKVDATHFEIIMEAYDKEGYRDGIINLYKTMSQNKVPAN 631
Query: 402 VRSYNIVINGFCK 414
+ ++ K
Sbjct: 632 SKILYYILKAVAK 644
>YG3M_YEAST (P48237) Hypothetical 101.4 kDa protein in RPL24B-RSR1
intergenic region
Length = 864
Score = 38.9 bits (89), Expect = 0.040
Identities = 52/257 (20%), Positives = 92/257 (35%), Gaps = 46/257 (17%)
Query: 225 LDQVSYGTLINGLCKVGETRAALEL----LRRVDGKLVQLDVVMYSTIIDSMCKDKNVND 280
+D + +NG K + L L L +++G +V+ + MY I +++ K N
Sbjct: 179 IDSREFSVWLNGTVKYLPFHSILHLDEMLLEQINGDVVKFNTHMYECIFNNLGNLKPTNF 238
Query: 281 AFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVD 340
D ++ V ++ + Y + K+T E IN
Sbjct: 239 NQDGTNDKVILKMKELLERYDKAL-----------------KITEERINK---------- 271
Query: 341 AFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTA 400
KE M Q I + + Y++ + +M I G+T
Sbjct: 272 --------KEGFPSKVPKMTQAILNNCLKYSTKCSSFH-----DMDYFITKFRDDYGITP 318
Query: 401 TVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQI--FPNVITYNSLIDGLCKSGRISYALE 458
++ VI + + +M QA F M FP++ TYN+++ K AL+
Sbjct: 319 NKQNLTTVIQFYSRKEMTKQAWNTFDTMKFLSTKHFPDICTYNTMLRICEKERNFPKALD 378
Query: 459 LIDLMHDRGQQPDIITY 475
L + D +P TY
Sbjct: 379 LFQEIQDHNIKPTTNTY 395
Score = 32.0 bits (71), Expect = 4.8
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 470 PDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTIL 513
PDI TY+++L K KA+ L +++D I+P TY ++
Sbjct: 355 PDICTYNTMLRICEKERNFPKALDLFQEIQDHNIKPTTNTYIMM 398
>POLB_MAIZE (P15718) Retrovirus-related Pol polyprotein from
transposon element BS1 (ORF 1) [Contains: Protease (EC
3.4.23.-); Reverse transcriptase (EC 2.7.7.49);
Endonuclease]
Length = 740
Score = 35.4 bits (80), Expect = 0.44
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Query: 523 LEDARNIFEDLLVKGYN---------LTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSC 573
+EDA +F+ +L KG +T + +++Q G +A +L +M++N
Sbjct: 442 VEDAAKVFDKMLTKGEEAPSVQRGVVMTAVAHNLLVQALFMDGRASDAYVVLEEMQNNGP 501
Query: 574 IPDAITYEI 582
PD TY +
Sbjct: 502 FPDVFTYTL 510
Score = 32.3 bits (72), Expect = 3.7
Identities = 19/68 (27%), Positives = 32/68 (46%), Gaps = 9/68 (13%)
Query: 418 VDQAMKLFKEMHHKQ---------IFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQ 468
V+ A K+F +M K + + +N L+ L GR S A +++ M + G
Sbjct: 442 VEDAAKVFDKMLTKGEEAPSVQRGVVMTAVAHNLLVQALFMDGRASDAYVVLEEMQNNGP 501
Query: 469 QPDIITYS 476
PD+ TY+
Sbjct: 502 FPDVFTYT 509
>RPOM_HUMAN (O00411) DNA-directed RNA polymerase, mitochondrial
precursor (EC 2.7.7.6) (MtRPOL)
Length = 1230
Score = 35.0 bits (79), Expect = 0.57
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 540 LTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDEN-DKAEK 598
LT++ Y ++ G+ G F E + +L +KD PD ++Y + + +D++ E+
Sbjct: 259 LTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAALQCMGRQDQDAGTIER 318
Query: 599 LLREMITRGL 608
L +M GL
Sbjct: 319 CLEQMSQEGL 328
Score = 31.6 bits (70), Expect = 6.3
Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Query: 335 FNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSI---LN 391
+N ++ + ++G KE L M+ G+ PD+++Y + + C+ + A +I L
Sbjct: 264 YNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAALQ--CMGRQDQDAGTIERCLE 321
Query: 392 TMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMH-HKQIFPNVITYNSLIDGLCKS 450
MS G+ ++++ + ++ K+ Q+ P V T L D K
Sbjct: 322 QMSQEGLKLQALFTAVLLSEEDRATVLKAVHKVKPTFSLPPQLPPPVNTSKLLRDVYAKD 381
Query: 451 GRISY 455
GR+SY
Sbjct: 382 GRVSY 386
>YC20_METJA (Q58617) Hypothetical adenine-specific methylase MJ1220
(EC 2.1.1.72)
Length = 578
Score = 33.5 bits (75), Expect = 1.7
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Query: 148 MEYRGIKPNFVN-FNILINCFCQLGLIPFAFSVLAKILKMGYE 189
M+ R ++P F+ +NIL++ F GL PF + + K+LK YE
Sbjct: 1 MKLRNVEPRFLKAYNILMDKF---GLFPFTYDMAEKVLKDNYE 40
>YZ18_METJA (Q60278) Hypothetical protein MJECL18
Length = 211
Score = 31.6 bits (70), Expect = 6.3
Identities = 19/89 (21%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 415 IKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDL---MHDRGQQPD 471
+++ D+A+K + ++ + + +++ L G + +E+ + + + + D
Sbjct: 28 VEVYDKAIKKAERIYDD--YAKAVILSNIAKSLYSRGLTNKVIEVYNKAIKIAEESSKRD 85
Query: 472 IITYSSILDALCKNHLVDKAIALLIKLKD 500
+I S I++ LC N L+DKA+ ++ K+ D
Sbjct: 86 VIL-SKIIENLCSNRLIDKALEVVNKISD 113
>RPOM_MOUSE (Q8BKF1) DNA-directed RNA polymerase, mitochondrial
precursor (EC 2.7.7.6) (MtRPOL)
Length = 1207
Score = 31.6 bits (70), Expect = 6.3
Identities = 16/69 (23%), Positives = 36/69 (51%), Gaps = 1/69 (1%)
Query: 540 LTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKA-EK 598
LT++ Y ++ G+ G F E + + +KD PD +Y + + +D++ + ++
Sbjct: 231 LTLHMYNTVMLGWARKGSFRELVYVFLMLKDAGLSPDLCSYAAALQCMGRRDQDVRTIQR 290
Query: 599 LLREMITRG 607
L++M+ G
Sbjct: 291 CLKQMMEEG 299
>NIH2_MASLA (Q47921) Nitrogenase iron protein 2 (EC 1.18.6.1)
(Nitrogenase component II) (Nitrogenase Fe protein 2)
(Nitrogenase reductase)
Length = 307
Score = 31.6 bits (70), Expect = 6.3
Identities = 19/74 (25%), Positives = 35/74 (46%)
Query: 346 GRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSY 405
G+ ++N LA M + G + IV + D L+ ++L+ + +G +
Sbjct: 18 GKSTTSQNTLAAMAEMGKRILIVGCDPKADSTRLILHCKAQTTVLHLAAEKGAVEDLELE 77
Query: 406 NIVINGFCKIKMVD 419
+VINGF I+ V+
Sbjct: 78 EVVINGFRNIRCVE 91
>KPC4_DROME (P83099) Putative protein kinase C, delta type homolog
(EC 2.7.1.37)
Length = 643
Score = 31.6 bits (70), Expect = 6.3
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
Query: 4 SFSIYYTIFIFFFVKLGLNTVTSYTCTSSFSENLITKLFSNSTLFWDTTMFHSSSSMLLR 63
+F + +F++ F K G + T + + S S +F S+S++LLR
Sbjct: 156 TFCAFCNLFLWGFGKQGYQCIICQTVVHKKCHDKLLGKCSGS-------VFTSASTILLR 208
Query: 64 SVFRVSVPKKFHPFQFPENT 83
F++ +P +F P F T
Sbjct: 209 ERFKIDMPHRFKPHTFMSPT 228
>YZ19_METJA (Q60279) Hypothetical protein MJECL19
Length = 174
Score = 31.2 bits (69), Expect = 8.3
Identities = 31/128 (24%), Positives = 61/128 (47%), Gaps = 10/128 (7%)
Query: 478 ILDALCKNHLVDKAIALLIKLKDQGIRPN-MYTYTILIDGLCKGGRL-EDARNIFEDLLV 535
+ + +CKN L ++A +L K+ D + + +Y ++ + RL + A I +D
Sbjct: 51 VAELICKNGLCNEAFLILDKIPDSYYKSSALYKMADILYRNKEHDRLIQIAEKIPDDYKK 110
Query: 536 KGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDK 595
L V ++ C G +DEA+++ K+ DN +A+ I +L +K DK
Sbjct: 111 SEVLLKV------VELLCESGKYDEAINIAEKIPDNYYKSEALFK--IAETLSNKGYYDK 162
Query: 596 AEKLLREM 603
A ++ ++
Sbjct: 163 AVEIAEKI 170
>Y391_HUMAN (O15091) Hypothetical protein KIAA0391
Length = 567
Score = 31.2 bits (69), Expect = 8.3
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 225 LDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDL 284
L+ Y LI GL R AL LL + K++ Y+ I ++VN A++L
Sbjct: 208 LEPRGYSLLIRGLIHSDRWREALLLLEDIK-KVITPSKKNYNDCIQGALLHQDVNTAWNL 266
Query: 285 YSEMVSRRISSNIVTYSA 302
Y E++ I + T A
Sbjct: 267 YQELLGHDIVPMLETLKA 284
>OPSP_PETMA (O42490) Pineal opsin (P-opsin) (Pineal gland-specific
opsin)
Length = 444
Score = 31.2 bits (69), Expect = 8.3
Identities = 16/36 (44%), Positives = 22/36 (60%)
Query: 229 SYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVM 264
SYG LI L K ET+ LE RR + ++ ++ VVM
Sbjct: 230 SYGKLIQKLKKASETQRGLESTRRAEQQVTRMVVVM 265
>OPS4_CANAL (P46596) Opaque-phase-specific protein OP4 precursor
Length = 402
Score = 31.2 bits (69), Expect = 8.3
Identities = 28/95 (29%), Positives = 42/95 (43%), Gaps = 5/95 (5%)
Query: 234 INGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDK--NVNDAFDLYSEMVSR 291
IN + E LEL RR D + +L +Y++ + + DK V D S ++
Sbjct: 50 INQKRDLAEGEDLLELQRRADSVIGELVSALYNSGVIGLVWDKLTTVPSISDSLSNIIKS 109
Query: 292 RISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSE 326
I IV ALI G L D +FNK+ ++
Sbjct: 110 AIQGAIVQGGALIQAVWNSGLLGD---VFNKLIND 141
>LE21_DEIRA (Q9RTY9) 3-isopropylmalate dehydratase large subunit 1
(EC 4.2.1.33) (Isopropylmalate isomerase 1) (Alpha-IPM
isomerase 1) (IPMI 1)
Length = 434
Score = 31.2 bits (69), Expect = 8.3
Identities = 22/65 (33%), Positives = 32/65 (48%), Gaps = 4/65 (6%)
Query: 213 NFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELL--RRVDGKLVQLDVVMYSTIID 270
N HD G +DQV GT NG ++ + AA E+L RRVD L + S +++
Sbjct: 288 NVHDVAELRGLKVDQVFIGTCTNG--RIEDLHAAAEVLRGRRVDPTTRLLVIPASSQVME 345
Query: 271 SMCKD 275
+D
Sbjct: 346 EALQD 350
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.325 0.140 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,954,066
Number of Sequences: 164201
Number of extensions: 2833807
Number of successful extensions: 9015
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 8942
Number of HSP's gapped (non-prelim): 57
length of query: 609
length of database: 59,974,054
effective HSP length: 116
effective length of query: 493
effective length of database: 40,926,738
effective search space: 20176881834
effective search space used: 20176881834
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 69 (31.2 bits)
Medicago: description of AC147497.8