BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC147484.13 + phase: 0 /pseudo
         (575 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GP6D_CHLMU (Q46442) Virulence plasmid protein pGP6-D                   39  0.028
GLPB_VIBVY (Q7MF00) Anaerobic glycerol-3-phosphate dehydrogenase...    33  2.0
GLPB_VIBVU (Q8D7Y4) Anaerobic glycerol-3-phosphate dehydrogenase...    33  2.0
SP0A_BACST (P52934) Stage 0 sporulation protein A                      32  4.5

>GP6D_CHLMU (Q46442) Virulence plasmid protein pGP6-D
          Length = 246

 Score = 39.3 bits (90), Expect = 0.028
 Identities = 28/96 (29%), Positives = 48/96 (49%), Gaps = 5/96 (5%)

Query: 119 NVQTLAELVSSEDNYGA-RLFICLLAQLAEEEGQEHDIISVLNLMATMIHICPAASDQL- 176
           +++  +  ++SE+N    RLF+     L++EE  + D++SV  L+ + I         L 
Sbjct: 29  SIEMFSTSLNSEENQSLDRLFLSETQNLSDEESYQEDVLSV-KLLTSQIKAIQKQHVLLL 87

Query: 177 --SLHGIGTTIRTCCFSTATFMSILVLVFNTLSSVH 210
              ++     +   CFS+ TF S L LVF T SS +
Sbjct: 88  GEKIYNARKILSKSCFSSTTFSSWLDLVFRTKSSAY 123


>GLPB_VIBVY (Q7MF00) Anaerobic glycerol-3-phosphate dehydrogenase
           subunit B (EC 1.1.99.5) (Anaerobic G-3-P dehydrogenase
           subunit B) (Anaerobic G3Pdhase B)
          Length = 438

 Score = 33.1 bits (74), Expect = 2.0
 Identities = 16/51 (31%), Positives = 27/51 (52%)

Query: 73  IHTVSLKWLFQQENIINSLCHQILKFCRNNNLEGDDMIIGNSNQTVNVQTL 123
           + ++ +  L +Q    NSLCHQ++K     +L     I+GN +  V +Q L
Sbjct: 194 LRSIDIARLLKQPQAFNSLCHQLMKHATQEDLVIMPAIMGNGDGLVLLQQL 244


>GLPB_VIBVU (Q8D7Y4) Anaerobic glycerol-3-phosphate dehydrogenase
           subunit B (EC 1.1.99.5) (Anaerobic G-3-P dehydrogenase
           subunit B) (Anaerobic G3Pdhase B)
          Length = 438

 Score = 33.1 bits (74), Expect = 2.0
 Identities = 16/51 (31%), Positives = 27/51 (52%)

Query: 73  IHTVSLKWLFQQENIINSLCHQILKFCRNNNLEGDDMIIGNSNQTVNVQTL 123
           + ++ +  L +Q    NSLCHQ++K     +L     I+GN +  V +Q L
Sbjct: 194 LRSIDIARLLKQPQAFNSLCHQLMKHATQEDLVIMPAIMGNGDGLVLLQQL 244


>SP0A_BACST (P52934) Stage 0 sporulation protein A
          Length = 259

 Score = 32.0 bits (71), Expect = 4.5
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)

Query: 512 LPSEPIKKVLATSYDLGDVCWFLIDLMSPDTLDMDSWGIHMDGKRLLEEIELFF 565
           + S+P  +V+ T+Y+ G  C  +++   PD L +D    H+DG  +LE I   F
Sbjct: 22  ISSQPDMEVIGTAYN-GQDCLQMLEEKRPDILLLDIIMPHLDGLAVLERIRAGF 74


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.349    0.152    0.538 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,318,283
Number of Sequences: 164201
Number of extensions: 2070734
Number of successful extensions: 8524
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 8521
Number of HSP's gapped (non-prelim): 4
length of query: 575
length of database: 59,974,054
effective HSP length: 116
effective length of query: 459
effective length of database: 40,926,738
effective search space: 18785372742
effective search space used: 18785372742
T: 11
A: 40
X1: 14 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.8 bits)
S2: 69 (31.2 bits)