BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147483.2 + phase: 0
(384 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YBZ7_YEAST (P38279) Hypothetical 33.5 kDa protein in MRPS9-YSW1 ... 66 2e-10
STM1_SCHPO (Q10482) Seven transmembrane protein 1 57 1e-07
YD03_SCHPO (Q10227) Hypothetical protein C2E12.03c in chromosome I 39 0.029
MPU1_ARATH (Q9LTI3) Mannose-P-dolichol utilization defect 1 prot... 38 0.038
YMP0_YEAST (Q03687) Hypothetical 46.9 kDa protein in PLB1-HXT2 i... 38 0.049
ERS1_YEAST (P17261) Transmembrane protein ERS1 (ERD suppressor) 37 0.065
CTNS_DROME (Q9VCR7) Cystinosin homolog 32 3.5
Y255_RICPR (Q9ZDS0) Hypothetical protein RP255 31 4.6
MSHR_MACMU (Q864J4) Melanocyte stimulating hormone receptor (MSH... 31 6.0
Y041_UREPA (Q9PRA4) Hypothetical protein UU041 30 7.9
MSHR_MACSL (Q864J7) Melanocyte stimulating hormone receptor (MSH... 30 7.9
MSHR_MACNG (Q864J5) Melanocyte stimulating hormone receptor (MSH... 30 7.9
MSHR_MACNE (Q864J8) Melanocyte stimulating hormone receptor (MSH... 30 7.9
>YBZ7_YEAST (P38279) Hypothetical 33.5 kDa protein in MRPS9-YSW1
intergenic region
Length = 296
Score = 65.9 bits (159), Expect = 2e-10
Identities = 32/85 (37%), Positives = 52/85 (60%), Gaps = 1/85 (1%)
Query: 31 DISFSLGLMSLVSWGVAEIPQIITIFRNKSSHGISLAFLLTWVAGDICNLVGCLLEPATL 90
++S G +S+ W V +PQI FR +S+ G+SL F++ W+ GDI N++G +++ L
Sbjct: 12 NLSGMAGSISICCWIVVFVPQIYENFRRQSAEGLSLLFIVLWLLGDIFNVMGAMMQ-NLL 70
Query: 91 PTQFYTALLYASTTIILLLQIVYYD 115
PT A Y +ILL+Q ++YD
Sbjct: 71 PTMIILAAYYTLADLILLIQCMWYD 95
Score = 32.0 bits (71), Expect = 2.7
Identities = 16/49 (32%), Positives = 26/49 (52%)
Query: 36 LGLMSLVSWGVAEIPQIITIFRNKSSHGISLAFLLTWVAGDICNLVGCL 84
LG +S + + + IPQI+ F+ KS G+S F L G+ ++ L
Sbjct: 211 LGYLSAILYLGSRIPQIVLNFKRKSCEGVSFLFFLFACLGNTSFIISVL 259
>STM1_SCHPO (Q10482) Seven transmembrane protein 1
Length = 271
Score = 56.6 bits (135), Expect = 1e-07
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 11/99 (11%)
Query: 25 LCNLRDDISFSLGLMSLVSWGVAEIPQIITIFRNKSSHGISLAFLLTWVAGDICNLVGCL 84
+ N+ ++S LG +SL W V IPQ++ ++N+S IS FL+ W+ GD N++G +
Sbjct: 10 MANILTELSSFLGALSLGCWVVLLIPQLLENYKNQSGESISDLFLIIWLIGDFFNVLGSI 69
Query: 85 ---LEPATLPTQFYTALLYASTTIILLLQIVYYDHILRW 120
+ L FY Y + LL+QI YY RW
Sbjct: 70 YGNVSSTVLVLSFY----YIVSDSTLLMQIYYY----RW 100
Score = 36.2 bits (82), Expect = 0.14
Identities = 29/91 (31%), Positives = 46/91 (49%), Gaps = 7/91 (7%)
Query: 30 DDIS---FSLGLMSLVSWGVAEIPQIITIFRNKSSHGISLAFLLTWVAGDICNLVGCLLE 86
DD++ F+ G +S V + A IPQII + KS+ G+S+ F + G+ L+
Sbjct: 172 DDLNAWPFTAGCISSVLYFCARIPQIIKNHKAKSTEGLSIIFFVLASVGNTSYAFSILVF 231
Query: 87 PATLPTQFYTA----LLYASTTIILLLQIVY 113
PA+ + A +L A +TI L + I Y
Sbjct: 232 PASDYLNYTYANLPWILGAFSTIFLDIYIFY 262
>YD03_SCHPO (Q10227) Hypothetical protein C2E12.03c in chromosome
I
Length = 283
Score = 38.5 bits (88), Expect = 0.029
Identities = 17/40 (42%), Positives = 24/40 (59%)
Query: 38 LMSLVSWGVAEIPQIITIFRNKSSHGISLAFLLTWVAGDI 77
++ V W V IPQII +R KS+ G+ F+L+WV I
Sbjct: 24 ILGTVCWCVQLIPQIIKNYRAKSTEGLDTLFILSWVVASI 63
>MPU1_ARATH (Q9LTI3) Mannose-P-dolichol utilization defect 1 protein
homolog
Length = 239
Score = 38.1 bits (87), Expect = 0.038
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 22 KDCLCNLRDDISFSLGLMSLVSWGVAEIPQIITIFRNKSSHGISLAFLLTWVAGDICNLV 81
KDCL L IS LG + + ++PQI+ I NKS G+S+ V G +L
Sbjct: 23 KDCLLPL---ISKLLGYFLVAASMTVKLPQIMKIVDNKSVKGLSVVAFELEVIGYTISLA 79
Query: 82 GCLLEPATLPTQFYTALLYASTTIILLLQIVYY 114
CL + LP + L + ++L+ +YY
Sbjct: 80 YCLNK--DLPFSAFGELAFLLIQALILVACIYY 110
>YMP0_YEAST (Q03687) Hypothetical 46.9 kDa protein in PLB1-HXT2
intergenic region
Length = 405
Score = 37.7 bits (86), Expect = 0.049
Identities = 26/117 (22%), Positives = 51/117 (43%), Gaps = 4/117 (3%)
Query: 14 VKWVETYFKDCLCN---LRDDISFSLGLMSLVSWGVAEIPQIITIFRNKSSHGISLAFLL 70
V+ + T+F + N L + +G + L+ + +PQI +++ KS G L L+
Sbjct: 231 VQILVTFFISNILNWDSLAQGLGSIIGSLGLLVESLLPLPQIAILYKLKSVQGFKLILLV 290
Query: 71 TWVAGDICNLVGCLLEPATLPTQFYT-ALLYASTTIILLLQIVYYDHILRWCKHRQN 126
+W+ GD + + + F AL S + Q +YY + +H+ +
Sbjct: 291 SWLCGDTLKITYLIFGAKNISALFVIFALFQMSLDFYIGGQYIYYRYYYPKLRHQHH 347
>ERS1_YEAST (P17261) Transmembrane protein ERS1 (ERD suppressor)
Length = 260
Score = 37.4 bits (85), Expect = 0.065
Identities = 29/106 (27%), Positives = 48/106 (44%), Gaps = 18/106 (16%)
Query: 30 DDISFSLGLMSLVSWGVAEIPQIITIFRNKSSHGISLAFLLTWVAGDICNLVGCLLE--- 86
DDI LG++ + SW ++ P IIT +R+KS+ IS+ F++ AG ++ L+
Sbjct: 5 DDI---LGIVYVTSWSISMYPPIITNWRHKSASAISMDFVMLNTAGYSYLVISIFLQLYC 61
Query: 87 ------------PATLPTQFYTALLYASTTIILLLQIVYYDHILRW 120
P F+ L ++LL Q+V I R+
Sbjct: 62 WKMTGDESDLGRPKLTQFDFWYCLHGCLMNVVLLTQVVAGARIWRF 107
>CTNS_DROME (Q9VCR7) Cystinosin homolog
Length = 397
Score = 31.6 bits (70), Expect = 3.5
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 10 NKECVKWVETYFKDCLCNLRDDISFSL--GLMSLVSWGVAEIPQIITIFRNKSSHGISLA 67
NKE VK + + + + R I S+ G + V+W V+ PQI + +R KS G++
Sbjct: 109 NKEIVK--DVFVRVTVAKSRALIYTSIIFGWVYFVAWSVSFYPQIWSNYRRKSVEGLNFD 166
Query: 68 FLLTWVAG 75
FL + G
Sbjct: 167 FLALNIVG 174
>Y255_RICPR (Q9ZDS0) Hypothetical protein RP255
Length = 381
Score = 31.2 bits (69), Expect = 4.6
Identities = 36/117 (30%), Positives = 52/117 (43%), Gaps = 18/117 (15%)
Query: 32 ISFSLGLMSLVSWGVAEIPQIITIFRNKSSHGISLAFLLTWVAGDICNLVGCLLEPATLP 91
I+F L + S+ + II I + K ++ LL W G NL+ LL P P
Sbjct: 101 INFILINFGIFSYFTSRTLDIIEISKEKKYLFLACIILL-WAGG---NLMVDLLNPFIKP 156
Query: 92 TQ---FYTALLYASTTIILLLQIVYYDHILRWCKHRQNVKSKLLLL----QLYYLTG 141
T ALLY I +L + ++Y+H H+ N+ SK L +L LTG
Sbjct: 157 TNNTIVICALLYC---INILTEFLHYNH----TSHKLNLNSKFSSLIKNIELQLLTG 206
>MSHR_MACMU (Q864J4) Melanocyte stimulating hormone receptor (MSH-R)
(Melanotropin receptor) (Melanocortin-1 receptor)
(MC1-R)
Length = 317
Score = 30.8 bits (68), Expect = 6.0
Identities = 29/115 (25%), Positives = 47/115 (40%), Gaps = 21/115 (18%)
Query: 25 LCNLRDDISFSLGLMSLVSWGVAEIPQIITIFRNKSSHGI------SLAFLLTWVAGDIC 78
L N+ D I+ S L SL G + + I+IF H I A WVA +C
Sbjct: 116 LDNVIDVITCSSMLSSLCFLGAIAVDRYISIFYALRYHSIVTLPRAQRAIAAIWVASVLC 175
Query: 79 NLVGCLLEPATLPTQFYT------ALLYASTTIILLLQIVYYDHILRWCKHRQNV 127
+ TL +Y L+ +++L+ ++Y + R C+H Q +
Sbjct: 176 S---------TLFIAYYDHAAVLLCLVVFFLAMLVLMAVLYVHMLARACQHAQGI 221
>Y041_UREPA (Q9PRA4) Hypothetical protein UU041
Length = 120
Score = 30.4 bits (67), Expect = 7.9
Identities = 12/36 (33%), Positives = 22/36 (60%)
Query: 36 LGLMSLVSWGVAEIPQIITIFRNKSSHGISLAFLLT 71
+G+ + + IPQ+I + + K + GISL FL++
Sbjct: 11 IGIFGSIFLVIGYIPQVIKVIKTKRTDGISLTFLIS 46
>MSHR_MACSL (Q864J7) Melanocyte stimulating hormone receptor (MSH-R)
(Melanotropin receptor) (Melanocortin-1 receptor)
(MC1-R)
Length = 317
Score = 30.4 bits (67), Expect = 7.9
Identities = 29/115 (25%), Positives = 47/115 (40%), Gaps = 21/115 (18%)
Query: 25 LCNLRDDISFSLGLMSLVSWGVAEIPQIITIFRNKSSHGISL------AFLLTWVAGDIC 78
L N+ D I+ S L SL G + + I+IF H I A WVA +C
Sbjct: 116 LDNVIDVITCSSMLSSLCFLGAIAVDRYISIFYALRYHSIVTLPRARRAIAAIWVASVLC 175
Query: 79 NLVGCLLEPATLPTQFYT------ALLYASTTIILLLQIVYYDHILRWCKHRQNV 127
+ TL +Y L+ +++L+ ++Y + R C+H Q +
Sbjct: 176 S---------TLFIAYYDHAAVLLCLVVFFLAMLVLMAVLYVHMLARACQHAQGI 221
>MSHR_MACNG (Q864J5) Melanocyte stimulating hormone receptor (MSH-R)
(Melanotropin receptor) (Melanocortin-1 receptor)
(MC1-R)
Length = 317
Score = 30.4 bits (67), Expect = 7.9
Identities = 29/115 (25%), Positives = 47/115 (40%), Gaps = 21/115 (18%)
Query: 25 LCNLRDDISFSLGLMSLVSWGVAEIPQIITIFRNKSSHGISL------AFLLTWVAGDIC 78
L N+ D I+ S L SL G + + I+IF H I A WVA +C
Sbjct: 116 LDNVIDVITCSSMLSSLCFLGAIAVDRYISIFYALRYHSIVTLPRARRAIAAIWVASVLC 175
Query: 79 NLVGCLLEPATLPTQFYT------ALLYASTTIILLLQIVYYDHILRWCKHRQNV 127
+ TL +Y L+ +++L+ ++Y + R C+H Q +
Sbjct: 176 S---------TLFIAYYDHAAVLLCLVVFFLAMLVLMAVLYVHMLARACQHAQGI 221
>MSHR_MACNE (Q864J8) Melanocyte stimulating hormone receptor (MSH-R)
(Melanotropin receptor) (Melanocortin-1 receptor)
(MC1-R)
Length = 317
Score = 30.4 bits (67), Expect = 7.9
Identities = 29/115 (25%), Positives = 47/115 (40%), Gaps = 21/115 (18%)
Query: 25 LCNLRDDISFSLGLMSLVSWGVAEIPQIITIFRNKSSHGISL------AFLLTWVAGDIC 78
L N+ D I+ S L SL G + + I+IF H I A WVA +C
Sbjct: 116 LDNVIDVITCSSMLSSLCFLGAIAVDRYISIFYALRYHSIVTLPRARRAIAAIWVASVLC 175
Query: 79 NLVGCLLEPATLPTQFYT------ALLYASTTIILLLQIVYYDHILRWCKHRQNV 127
+ TL +Y L+ +++L+ ++Y + R C+H Q +
Sbjct: 176 S---------TLFIAYYDHAAVLLCLVVFFLAMLVLMAVLYVHMLARACQHAQGI 221
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.354 0.155 0.589
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,869,930
Number of Sequences: 164201
Number of extensions: 1403629
Number of successful extensions: 6203
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 6177
Number of HSP's gapped (non-prelim): 23
length of query: 384
length of database: 59,974,054
effective HSP length: 112
effective length of query: 272
effective length of database: 41,583,542
effective search space: 11310723424
effective search space used: 11310723424
T: 11
A: 40
X1: 14 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.6 bits)
S2: 67 (30.4 bits)
Medicago: description of AC147483.2