BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147435.2 + phase: 0
(384 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
FT10_HUMAN (O15205) Ubiquitin-like protein FAT10 (Diubiquitin) 49 3e-05
UBIQ_LEIMA (Q05550) Ubiquitin 48 5e-05
RUB2_ARATH (Q8RUC6) Ubiquitin-related protein 2 precursor (AtRUB2) 48 5e-05
RUB1_ARATH (Q9SHE7) Ubiquitin-related protein 1 precursor (AtRUB1) 48 5e-05
UBIQ_TRYBB (P15174) Ubiquitin 47 6e-05
UBIQ_AGLNE (P42740) Ubiquitin 47 6e-05
UBIQ_XENLA (P62972) Ubiquitin 47 8e-05
UBIQ_TRYCR (P08565) Ubiquitin 47 8e-05
UBIQ_SPOFR (P68195) Ubiquitin 47 8e-05
UBIQ_RAT (P62989) Ubiquitin 47 8e-05
UBIQ_RABIT (P62975) Ubiquitin 47 8e-05
UBIQ_PONPY (Q867C4) Ubiquitin 47 8e-05
UBIQ_PLUXY (P68201) Ubiquitin 47 8e-05
UBIQ_PIG (P62974) Ubiquitin 47 8e-05
UBIQ_PANTR (Q867C3) Ubiquitin 47 8e-05
UBIQ_OPHHA (P68204) Ubiquitin 47 8e-05
UBIQ_MOUSE (P62991) Ubiquitin 47 8e-05
UBIQ_MANSE (P68196) Ubiquitin 47 8e-05
UBIQ_ICTPU (P68199) Ubiquitin 47 8e-05
UBIQ_HUMAN (P62988) Ubiquitin 47 8e-05
>FT10_HUMAN (O15205) Ubiquitin-like protein FAT10 (Diubiquitin)
Length = 165
Score = 48.5 bits (114), Expect = 3e-05
Identities = 42/162 (25%), Positives = 71/162 (42%), Gaps = 21/162 (12%)
Query: 19 LSPNAFHLPSHLSFEDKSISIFLSVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQ 78
++PNA L H+ E+ L F +D+++ +K ++ +P +
Sbjct: 1 MAPNASCLCVHVRSEE----------WDLMTFDANPYDSVKKIKEHVRSKTKVPV---QD 47
Query: 79 KLVYAGRELARSDTLLKDYGVTDGNVLHL---IIKLSDLQLINVKTSSGKEFS---FQVE 132
+++ G ++ + L YG+ +HL ++K SD +L SG E QV
Sbjct: 48 QVLLLGSKILKPRRSLSSYGIDKEKTIHLTLKVVKPSDEELPLFLVESGDEAKRHLLQVR 107
Query: 133 RGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDD 174
R V +K I K E Q + CNG+RLED K++ D
Sbjct: 108 RSSSVAQVKAMIETKTGIIP--ETQIVTCNGKRLEDGKMMAD 147
>UBIQ_LEIMA (Q05550) Ubiquitin
Length = 76
Score = 47.8 bits (112), Expect = 5e-05
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTIE+VK KIQ E +P ++Q+L++AG++L T L DY +
Sbjct: 7 TLTGKTIALEVEPSDTIENVKAKIQDKEGIP--PDQQRLIFAGKQLEEGRT-LSDYNIQK 63
Query: 102 GNVLHLIIKL 111
+ LHL+++L
Sbjct: 64 ESTLHLVLRL 73
Score = 35.8 bits (81), Expect = 0.19
Identities = 23/75 (30%), Positives = 42/75 (55%), Gaps = 3/75 (4%)
Query: 117 INVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDIC 176
I VKT +GK + +VE ++ +K +I KE D +Q L+ G++LE+ + + D
Sbjct: 3 IFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPD--QQRLIFAGKQLEEGRTLSDYN 60
Query: 177 CKHNDAVVHLFVRKR 191
+ ++ +HL +R R
Sbjct: 61 IQ-KESTLHLVLRLR 74
>RUB2_ARATH (Q8RUC6) Ubiquitin-related protein 2 precursor (AtRUB2)
Length = 78
Score = 47.8 bits (112), Expect = 5e-05
Identities = 23/56 (41%), Positives = 39/56 (69%), Gaps = 3/56 (5%)
Query: 56 DTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTDGNVLHLIIKL 111
DTI+ +K +++ E +P + +Q+L+YAG++LA D KDY + G+VLHL++ L
Sbjct: 21 DTIDRIKERVEEKEGIPPV--QQRLIYAGKQLA-DDKTAKDYAIEGGSVLHLVLAL 73
Score = 36.2 bits (82), Expect = 0.14
Identities = 24/76 (31%), Positives = 39/76 (50%), Gaps = 3/76 (3%)
Query: 116 LINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDI 175
+I VKT +GKE +E + IK R+ +EK+ +Q L+ G++L D K D
Sbjct: 2 MIKVKTLTGKEIEIDIEPTDTIDRIKERV--EEKEGIPPVQQRLIYAGKQLADDKTAKDY 59
Query: 176 CCKHNDAVVHLFVRKR 191
+ +V+HL + R
Sbjct: 60 AIE-GGSVLHLVLALR 74
>RUB1_ARATH (Q9SHE7) Ubiquitin-related protein 1 precursor (AtRUB1)
Length = 80
Score = 47.8 bits (112), Expect = 5e-05
Identities = 23/56 (41%), Positives = 39/56 (69%), Gaps = 3/56 (5%)
Query: 56 DTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTDGNVLHLIIKL 111
DTI+ +K +++ E +P + +Q+L+YAG++LA D KDY + G+VLHL++ L
Sbjct: 21 DTIDRIKERVEEKEGIPPV--QQRLIYAGKQLA-DDKTAKDYNIEGGSVLHLVLAL 73
Score = 35.0 bits (79), Expect = 0.32
Identities = 24/76 (31%), Positives = 39/76 (50%), Gaps = 3/76 (3%)
Query: 116 LINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDI 175
+I VKT +GKE +E + IK R+ +EK+ +Q L+ G++L D K D
Sbjct: 2 MIKVKTLTGKEIEIDIEPTDTIDRIKERV--EEKEGIPPVQQRLIYAGKQLADDKTAKDY 59
Query: 176 CCKHNDAVVHLFVRKR 191
+ +V+HL + R
Sbjct: 60 NIE-GGSVLHLVLALR 74
>UBIQ_TRYBB (P15174) Ubiquitin
Length = 76
Score = 47.4 bits (111), Expect = 6e-05
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTIE+VK KIQ E +P ++Q+L++AG++L T L DY +
Sbjct: 7 TLTGKTIALEVEASDTIENVKAKIQDKEGIP--PDQQRLIFAGKQLEEGRT-LADYNIQK 63
Query: 102 GNVLHLIIKL 111
+ LHL+++L
Sbjct: 64 ESTLHLVLRL 73
Score = 35.4 bits (80), Expect = 0.25
Identities = 23/75 (30%), Positives = 42/75 (55%), Gaps = 3/75 (4%)
Query: 117 INVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDIC 176
I VKT +GK + +VE ++ +K +I KE D +Q L+ G++LE+ + + D
Sbjct: 3 IFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPD--QQRLIFAGKQLEEGRTLADYN 60
Query: 177 CKHNDAVVHLFVRKR 191
+ ++ +HL +R R
Sbjct: 61 IQ-KESTLHLVLRLR 74
>UBIQ_AGLNE (P42740) Ubiquitin
Length = 76
Score = 47.4 bits (111), Expect = 6e-05
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTIE+VK KIQ E +P ++Q+L++AG++L T L DY +
Sbjct: 7 TLTGKTITLEVESSDTIENVKTKIQDKEGIP--PDQQRLIFAGKQLEDGRT-LSDYNIQK 63
Query: 102 GNVLHLIIKL 111
+ LHL+++L
Sbjct: 64 ESTLHLVLRL 73
Score = 37.7 bits (86), Expect = 0.049
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 117 INVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDIC 176
I VKT +GK + +VE ++ +K +I KE D +Q L+ G++LED + + D
Sbjct: 3 IFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSDYN 60
Query: 177 CKHNDAVVHLFVRKR 191
+ ++ +HL +R R
Sbjct: 61 IQ-KESTLHLVLRLR 74
>UBIQ_XENLA (P62972) Ubiquitin
Length = 76
Score = 47.0 bits (110), Expect = 8e-05
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTIE+VK KIQ E +P ++Q+L++AG++L T L DY +
Sbjct: 7 TLTGKTITLEVEPSDTIENVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRT-LSDYNIQK 63
Query: 102 GNVLHLIIKL 111
+ LHL+++L
Sbjct: 64 ESTLHLVLRL 73
Score = 37.4 bits (85), Expect = 0.065
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 117 INVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDIC 176
I VKT +GK + +VE ++ +K +I KE D +Q L+ G++LED + + D
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSDYN 60
Query: 177 CKHNDAVVHLFVRKR 191
+ ++ +HL +R R
Sbjct: 61 IQ-KESTLHLVLRLR 74
>UBIQ_TRYCR (P08565) Ubiquitin
Length = 76
Score = 47.0 bits (110), Expect = 8e-05
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTIE+VK KIQ E +P ++Q+L++AG++L T L DY +
Sbjct: 7 TLTGKTIALEVESSDTIENVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRT-LADYNIQK 63
Query: 102 GNVLHLIIKL 111
+ LHL+++L
Sbjct: 64 ESTLHLVLRL 73
Score = 37.0 bits (84), Expect = 0.084
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 117 INVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDIC 176
I VKT +GK + +VE ++ +K +I KE D +Q L+ G++LED + + D
Sbjct: 3 IFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLADYN 60
Query: 177 CKHNDAVVHLFVRKR 191
+ ++ +HL +R R
Sbjct: 61 IQ-KESTLHLVLRLR 74
>UBIQ_SPOFR (P68195) Ubiquitin
Length = 76
Score = 47.0 bits (110), Expect = 8e-05
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTIE+VK KIQ E +P ++Q+L++AG++L T L DY +
Sbjct: 7 TLTGKTITLEVEPSDTIENVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRT-LSDYNIQK 63
Query: 102 GNVLHLIIKL 111
+ LHL+++L
Sbjct: 64 ESTLHLVLRL 73
Score = 37.4 bits (85), Expect = 0.065
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 117 INVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDIC 176
I VKT +GK + +VE ++ +K +I KE D +Q L+ G++LED + + D
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSDYN 60
Query: 177 CKHNDAVVHLFVRKR 191
+ ++ +HL +R R
Sbjct: 61 IQ-KESTLHLVLRLR 74
>UBIQ_RAT (P62989) Ubiquitin
Length = 76
Score = 47.0 bits (110), Expect = 8e-05
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTIE+VK KIQ E +P ++Q+L++AG++L T L DY +
Sbjct: 7 TLTGKTITLEVEPSDTIENVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRT-LSDYNIQK 63
Query: 102 GNVLHLIIKL 111
+ LHL+++L
Sbjct: 64 ESTLHLVLRL 73
Score = 37.4 bits (85), Expect = 0.065
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 117 INVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDIC 176
I VKT +GK + +VE ++ +K +I KE D +Q L+ G++LED + + D
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSDYN 60
Query: 177 CKHNDAVVHLFVRKR 191
+ ++ +HL +R R
Sbjct: 61 IQ-KESTLHLVLRLR 74
>UBIQ_RABIT (P62975) Ubiquitin
Length = 76
Score = 47.0 bits (110), Expect = 8e-05
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTIE+VK KIQ E +P ++Q+L++AG++L T L DY +
Sbjct: 7 TLTGKTITLEVEPSDTIENVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRT-LSDYNIQK 63
Query: 102 GNVLHLIIKL 111
+ LHL+++L
Sbjct: 64 ESTLHLVLRL 73
Score = 37.4 bits (85), Expect = 0.065
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 117 INVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDIC 176
I VKT +GK + +VE ++ +K +I KE D +Q L+ G++LED + + D
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSDYN 60
Query: 177 CKHNDAVVHLFVRKR 191
+ ++ +HL +R R
Sbjct: 61 IQ-KESTLHLVLRLR 74
>UBIQ_PONPY (Q867C4) Ubiquitin
Length = 76
Score = 47.0 bits (110), Expect = 8e-05
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTIE+VK KIQ E +P ++Q+L++AG++L T L DY +
Sbjct: 7 TLTGKTITLEVEPSDTIENVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRT-LSDYNIQK 63
Query: 102 GNVLHLIIKL 111
+ LHL+++L
Sbjct: 64 ESTLHLVLRL 73
Score = 37.4 bits (85), Expect = 0.065
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 117 INVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDIC 176
I VKT +GK + +VE ++ +K +I KE D +Q L+ G++LED + + D
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSDYN 60
Query: 177 CKHNDAVVHLFVRKR 191
+ ++ +HL +R R
Sbjct: 61 IQ-KESTLHLVLRLR 74
>UBIQ_PLUXY (P68201) Ubiquitin
Length = 76
Score = 47.0 bits (110), Expect = 8e-05
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTIE+VK KIQ E +P ++Q+L++AG++L T L DY +
Sbjct: 7 TLTGKTITLEVEPSDTIENVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRT-LSDYNIQK 63
Query: 102 GNVLHLIIKL 111
+ LHL+++L
Sbjct: 64 ESTLHLVLRL 73
Score = 37.4 bits (85), Expect = 0.065
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 117 INVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDIC 176
I VKT +GK + +VE ++ +K +I KE D +Q L+ G++LED + + D
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSDYN 60
Query: 177 CKHNDAVVHLFVRKR 191
+ ++ +HL +R R
Sbjct: 61 IQ-KESTLHLVLRLR 74
>UBIQ_PIG (P62974) Ubiquitin
Length = 76
Score = 47.0 bits (110), Expect = 8e-05
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTIE+VK KIQ E +P ++Q+L++AG++L T L DY +
Sbjct: 7 TLTGKTITLEVEPSDTIENVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRT-LSDYNIQK 63
Query: 102 GNVLHLIIKL 111
+ LHL+++L
Sbjct: 64 ESTLHLVLRL 73
Score = 37.4 bits (85), Expect = 0.065
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 117 INVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDIC 176
I VKT +GK + +VE ++ +K +I KE D +Q L+ G++LED + + D
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSDYN 60
Query: 177 CKHNDAVVHLFVRKR 191
+ ++ +HL +R R
Sbjct: 61 IQ-KESTLHLVLRLR 74
>UBIQ_PANTR (Q867C3) Ubiquitin
Length = 76
Score = 47.0 bits (110), Expect = 8e-05
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTIE+VK KIQ E +P ++Q+L++AG++L T L DY +
Sbjct: 7 TLTGKTITLEVEPSDTIENVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRT-LSDYNIQK 63
Query: 102 GNVLHLIIKL 111
+ LHL+++L
Sbjct: 64 ESTLHLVLRL 73
Score = 37.4 bits (85), Expect = 0.065
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 117 INVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDIC 176
I VKT +GK + +VE ++ +K +I KE D +Q L+ G++LED + + D
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSDYN 60
Query: 177 CKHNDAVVHLFVRKR 191
+ ++ +HL +R R
Sbjct: 61 IQ-KESTLHLVLRLR 74
>UBIQ_OPHHA (P68204) Ubiquitin
Length = 76
Score = 47.0 bits (110), Expect = 8e-05
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTIE+VK KIQ E +P ++Q+L++AG++L T L DY +
Sbjct: 7 TLTGKTITLEVEPSDTIENVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRT-LSDYNIQK 63
Query: 102 GNVLHLIIKL 111
+ LHL+++L
Sbjct: 64 ESTLHLVLRL 73
Score = 37.4 bits (85), Expect = 0.065
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 117 INVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDIC 176
I VKT +GK + +VE ++ +K +I KE D +Q L+ G++LED + + D
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSDYN 60
Query: 177 CKHNDAVVHLFVRKR 191
+ ++ +HL +R R
Sbjct: 61 IQ-KESTLHLVLRLR 74
>UBIQ_MOUSE (P62991) Ubiquitin
Length = 76
Score = 47.0 bits (110), Expect = 8e-05
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTIE+VK KIQ E +P ++Q+L++AG++L T L DY +
Sbjct: 7 TLTGKTITLEVEPSDTIENVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRT-LSDYNIQK 63
Query: 102 GNVLHLIIKL 111
+ LHL+++L
Sbjct: 64 ESTLHLVLRL 73
Score = 37.4 bits (85), Expect = 0.065
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 117 INVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDIC 176
I VKT +GK + +VE ++ +K +I KE D +Q L+ G++LED + + D
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSDYN 60
Query: 177 CKHNDAVVHLFVRKR 191
+ ++ +HL +R R
Sbjct: 61 IQ-KESTLHLVLRLR 74
>UBIQ_MANSE (P68196) Ubiquitin
Length = 76
Score = 47.0 bits (110), Expect = 8e-05
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTIE+VK KIQ E +P ++Q+L++AG++L T L DY +
Sbjct: 7 TLTGKTITLEVEPSDTIENVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRT-LSDYNIQK 63
Query: 102 GNVLHLIIKL 111
+ LHL+++L
Sbjct: 64 ESTLHLVLRL 73
Score = 37.4 bits (85), Expect = 0.065
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 117 INVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDIC 176
I VKT +GK + +VE ++ +K +I KE D +Q L+ G++LED + + D
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSDYN 60
Query: 177 CKHNDAVVHLFVRKR 191
+ ++ +HL +R R
Sbjct: 61 IQ-KESTLHLVLRLR 74
>UBIQ_ICTPU (P68199) Ubiquitin
Length = 76
Score = 47.0 bits (110), Expect = 8e-05
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTIE+VK KIQ E +P ++Q+L++AG++L T L DY +
Sbjct: 7 TLTGKTITLEVEPSDTIENVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRT-LSDYNIQK 63
Query: 102 GNVLHLIIKL 111
+ LHL+++L
Sbjct: 64 ESTLHLVLRL 73
Score = 37.4 bits (85), Expect = 0.065
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 117 INVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDIC 176
I VKT +GK + +VE ++ +K +I KE D +Q L+ G++LED + + D
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSDYN 60
Query: 177 CKHNDAVVHLFVRKR 191
+ ++ +HL +R R
Sbjct: 61 IQ-KESTLHLVLRLR 74
>UBIQ_HUMAN (P62988) Ubiquitin
Length = 76
Score = 47.0 bits (110), Expect = 8e-05
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTIE+VK KIQ E +P ++Q+L++AG++L T L DY +
Sbjct: 7 TLTGKTITLEVEPSDTIENVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRT-LSDYNIQK 63
Query: 102 GNVLHLIIKL 111
+ LHL+++L
Sbjct: 64 ESTLHLVLRL 73
Score = 37.4 bits (85), Expect = 0.065
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 117 INVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDIC 176
I VKT +GK + +VE ++ +K +I KE D +Q L+ G++LED + + D
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSDYN 60
Query: 177 CKHNDAVVHLFVRKR 191
+ ++ +HL +R R
Sbjct: 61 IQ-KESTLHLVLRLR 74
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.318 0.137 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,143,110
Number of Sequences: 164201
Number of extensions: 1906679
Number of successful extensions: 4925
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 89
Number of HSP's that attempted gapping in prelim test: 4747
Number of HSP's gapped (non-prelim): 155
length of query: 384
length of database: 59,974,054
effective HSP length: 112
effective length of query: 272
effective length of database: 41,583,542
effective search space: 11310723424
effective search space used: 11310723424
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Medicago: description of AC147435.2