BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC147406.4 - phase: 0 
         (310 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AIRC_ARATH (Q94BT2) Auxin-induced in root cultures protein 12 pr...    44  7e-04
YFGG_SCHPO (O13854) Hypothetical serine/threonine-rich protein C...    31  3.4
TDH_THETN (Q8R7K0) L-threonine 3-dehydrogenase (EC 1.1.1.103)          31  3.4
RT31_HUMAN (Q92665) 28S ribosomal protein S31, mitochondrial pre...    31  3.4
HEM3_HELHP (Q7VFE9) Porphobilinogen deaminase (EC 2.5.1.61) (PBG...    31  3.4
NU1M_ACACA (Q37381) NADH-ubiquinone oxidoreductase chain 1 (EC 1...    30  5.8
CPHA_CYAA5 (Q9KGY4) Cyanophycin synthetase (EC 6.-.-.-)                30  5.8
YK02_SCHPO (Q9HDY9) Hypothetical serine/threonine-rich protein P...    30  7.6
SOL_DROME (P27398) Small optic lobes protein (EC 3.4.22.-)             30  7.6
GUNF_CLOCE (P37698) Endoglucanase F precursor (EC 3.2.1.4) (Endo...    30  7.6
Y535_CLOPE (Q8XN03) Hypothetical UPF0059 protein CPE0535               30  10.0

>AIRC_ARATH (Q94BT2) Auxin-induced in root cultures protein 12
           precursor
          Length = 252

 Score = 43.5 bits (101), Expect = 7e-04
 Identities = 31/111 (27%), Positives = 50/111 (44%), Gaps = 4/111 (3%)

Query: 1   MIGAQALVAIPQASGSPKAYTSNIVDTSTRLQEGTISYPVSGLSA-TYQNNKVTIFATLT 59
           M G+QA +A     G+     +  + + + L EG +++    L A +    ++ IF T+ 
Sbjct: 91  MAGSQAFLAYRSGGGAAPVVKTYNISSYSSLVEGKLAFDFWNLRAESLSGGRIAIFTTVK 150

Query: 60  LPNGTTSLVHVWQDGVLSSDSTPQEHSHESSHQNSKEVLDLVSGTSQAASG 110
           +P G  S+  VWQ G   ++  P  H     +  S  VL   S T  AA G
Sbjct: 151 VPAGADSVNQVWQIGGNVTNGRPGVHPFGPDNLGSHRVL---SFTEDAAPG 198


>YFGG_SCHPO (O13854) Hypothetical serine/threonine-rich protein
           C19G12.16c in chromosome I precursor
          Length = 670

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 2/108 (1%)

Query: 6   ALVAIPQASGSPKAYTSNIVDTSTRLQEGTISYPVSGLSATYQNNKVTIFATLTLPNGTT 65
           ++++    S S    TS I  TST +   + S  +S  + +Y  N  T  +T T  + T 
Sbjct: 232 SVISSASLSSSSVLPTSIITSTSTPVTVSSSS--LSSFTPSYSTNLTTTGSTTTTGSATV 289

Query: 66  SLVHVWQDGVLSSDSTPQEHSHESSHQNSKEVLDLVSGTSQAASGIGS 113
           S    + +  +   S P   S  +S  +S       S TS   +G G+
Sbjct: 290 SSSPFYSNSSVIPTSVPSSVSSFTSSSSSYTTTLTASNTSVTYTGTGT 337


>TDH_THETN (Q8R7K0) L-threonine 3-dehydrogenase (EC 1.1.1.103)
          Length = 347

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 29/107 (27%), Positives = 42/107 (39%), Gaps = 10/107 (9%)

Query: 50  NKVTIFATLTLPNGTTSLVHVWQDGVLSSDSTPQEHSHE--------SSHQNSKEVLDLV 101
           ++V I    T   GT   ++VW +   S    P+   HE          +  S +V DLV
Sbjct: 30  DEVLIKVKATSICGTDVHIYVWNEWAKSRIKPPKTMGHEFVGEVVEIGENVTSVKVGDLV 89

Query: 102 SGTSQAASGIGSRQRRRNTHGVLNAISWGILMPTGAVIARYLKVFKS 148
           S  +    G     R  N H   N +  G+   T    A Y+KV +S
Sbjct: 90  SAETHIVCGKCRACRTGNAHICENTLILGV--DTDGAFAEYIKVPES 134


>RT31_HUMAN (Q92665) 28S ribosomal protein S31, mitochondrial
           precursor (S31mt) (MRP-S31) (Imogen 38)
          Length = 395

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 5/104 (4%)

Query: 11  PQASGSPKAYTSNIVDTSTRLQEGTISYPVSGLSATYQNNKVTIFATLTLPNGTTSLVHV 70
           P +SGSP+   + I+  + R   GT+ Y  S L A  +NN    F T ++         V
Sbjct: 18  PLSSGSPETSAAAIMLLTVR--HGTVRYRSSALLARTKNNIQRYFGTNSVICSKKDKQSV 75

Query: 71  WQDGVLSSDSTPQEHSHESSHQNSKEVLDLVSGTSQAASGIGSR 114
             + +    S  Q+   E++    K++L ++ G     S +  R
Sbjct: 76  RTEEISKETSESQDSEKENT---KKDLLGIIKGMKVELSTVNVR 116


>HEM3_HELHP (Q7VFE9) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)
           (Hydroxymethylbilane synthase) (HMBS)
           (Pre-uroporphyrinogen synthase)
          Length = 321

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 30  RLQEGTISYPVSGLSATYQNNKVTIFATLTLPNGTTSLVHVWQDGVLSSDSTPQEH 85
           R  EG    P+ G+ A + NNK+T+ A + LP+G+  L    +D +   D    E+
Sbjct: 240 RTLEGGCQVPI-GVYAQFSNNKLTLQAIVGLPDGSEVLQDSVEDSINIDDINASEN 294


>NU1M_ACACA (Q37381) NADH-ubiquinone oxidoreductase chain 1 (EC
           1.6.5.3)
          Length = 369

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 22/72 (30%), Positives = 36/72 (49%), Gaps = 4/72 (5%)

Query: 185 ITYDTHRALAIVLVTL---ATLQVFALFLRPNKDHKLRFYWNIYHHV-VGYVTISISIVN 240
           IT+  H  + I+ V +   A + V A   R   D  +R  W ++  + +G V ISIS+  
Sbjct: 288 ITWIYHSLVYIIKVYIYLFAFIWVRATLPRYRYDQLMRLGWKVFVPLTIGLVFISISLTL 347

Query: 241 VFKGFEALGDFV 252
            F GF + G ++
Sbjct: 348 FFDGFPSEGGYI 359


>CPHA_CYAA5 (Q9KGY4) Cyanophycin synthetase (EC 6.-.-.-)
          Length = 872

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 4/28 (14%)

Query: 244 GFEALGDFVGDRYKNWKHAYIGIIGALG 271
           G+EA+G+FV    KNWK   +G++G  G
Sbjct: 752 GYEAVGEFV----KNWKGQRLGVVGGPG 775


>YK02_SCHPO (Q9HDY9) Hypothetical serine/threonine-rich protein
           P11E10.02c in chromosome I precursor
          Length = 1082

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 29/122 (23%), Positives = 53/122 (42%), Gaps = 6/122 (4%)

Query: 9   AIPQASGSPKAYTSN-IVDTSTRLQEG-----TISYPVSGLSATYQNNKVTIFATLTLPN 62
           A P    SP + +S+ +V+TS+ L +      T +   S ++ T  N+  +   T  LP+
Sbjct: 263 ATPSTLSSPASSSSSYLVETSSTLTDSVFTTVTATSDSSVITYTLINSVTSSSETTNLPS 322

Query: 63  GTTSLVHVWQDGVLSSDSTPQEHSHESSHQNSKEVLDLVSGTSQAASGIGSRQRRRNTHG 122
            ++SLV + +    SS  +    S  +    S    D ++  S  +S + S      T  
Sbjct: 323 SSSSLVTIGESSFPSSLLSLLTQSFSTVRSTSSSSTDQLTSASPISSSVISPSVSSPTSS 382

Query: 123 VL 124
           +L
Sbjct: 383 IL 384


>SOL_DROME (P27398) Small optic lobes protein (EC 3.4.22.-)
          Length = 1594

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 6/58 (10%)

Query: 59  TLP-NGTTSLVHVWQDGV-----LSSDSTPQEHSHESSHQNSKEVLDLVSGTSQAASG 110
           T+P NG    V+ W + +     +SS S    H H +S+ NS    ++++  S ++SG
Sbjct: 402 TIPRNGVFIAVNEWSEPMASSSSVSSSSNHHHHHHSNSNSNSSGNSNIINNNSSSSSG 459


>GUNF_CLOCE (P37698) Endoglucanase F precursor (EC 3.2.1.4)
           (Endo-1,4-beta-glucanase F) (Cellulase F) (EGCCF)
          Length = 722

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 10/76 (13%)

Query: 88  ESSHQNSKEVLDLVSGTSQAASGIGSRQRRRNTHGVLN-----AISWGILMPTGAVIARY 142
           E+S QN++++LD +      + GI + ++R + H  L+        W   MP G VI   
Sbjct: 544 ETSRQNAQKLLDAMWNNYSDSKGISTVEQRGDYHRFLDQEVFVPAGWTGKMPNGDVIKSG 603

Query: 143 LKVFK-----SADPAW 153
           +K          DP W
Sbjct: 604 VKFIDIRSKYKQDPEW 619


>Y535_CLOPE (Q8XN03) Hypothetical UPF0059 protein CPE0535
          Length = 213

 Score = 29.6 bits (65), Expect = 10.0
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 5/51 (9%)

Query: 228 VVGYVTISISIVNVFKGFEALGDFVGDRYKNWKHAYIGIIGALGGIAVLLE 278
           ++G +T  +  + V      +G+ +GD +KN+     G+I  L GI +LLE
Sbjct: 158 IIGIITFVLCFLGVI-----IGEKLGDIFKNYAEIVGGVILILIGINILLE 203


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.318    0.134    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,812,482
Number of Sequences: 164201
Number of extensions: 1536724
Number of successful extensions: 3901
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 3897
Number of HSP's gapped (non-prelim): 12
length of query: 310
length of database: 59,974,054
effective HSP length: 110
effective length of query: 200
effective length of database: 41,911,944
effective search space: 8382388800
effective search space used: 8382388800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)