BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC147364.11 - phase: 0 
         (184 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

RNB_HHV11 (P04487) RNA-binding protein (Vmw21)                         40  0.002
BAG_STRAG (P27951) IgA FC receptor precursor (Beta antigen) (B a...    40  0.003
RNB_HHV1M (P56958) RNA-binding protein (Vmw21)                         39  0.009
MUA1_XENLA (P10667) Integumentary mucin A.1 precursor (FIM-A.1) ...    38  0.015
MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia p...    36  0.044
WD33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)    35  0.097
APP1_SCHPO (Q9P7E8) App1 protein                                       35  0.13
RNB_HHV2H (P89479) Potential RNA-binding protein                       34  0.22
NFM_CHICK (P16053) Neurofilament triplet M protein (160 kDa neur...    32  0.63
MY15_HUMAN (Q9UKN7) Myosin XV (Unconventional myosin-15)               32  1.1
VGLD_HHV11 (Q69091) Glycoprotein D precursor                           31  1.8
SFR2_CAEEL (Q09511) Probable splicing factor, arginine/serine-ri...    31  1.8
ESX1_HUMAN (Q8N693) Extraembryonic, spermatogenesis, homeobox 1-...    31  1.8
CA1G_MESAU (Q9JMH4) Collagen alpha 1(XVII) chain (Bullous pemphi...    31  1.8
CA1G_HUMAN (Q9UMD9) Collagen alpha 1(XVII) chain (Bullous pemphi...    31  1.8
AD29_HUMAN (Q9UKF5) ADAM 29 precursor (A disintegrin and metallo...    31  1.8
Y168_ADE02 (P03292) Hypothetical protein C-168                         30  2.4
SFRG_HUMAN (Q8N2M8) Splicing factor, arginine/serine-rich 16 (Su...    30  2.4
PTPZ_RAT (Q62656) Receptor-type protein-tyrosine phosphatase zet...    30  2.4
CA18_MOUSE (Q00780) Collagen alpha 1(VIII) chain precursor             30  2.4

>RNB_HHV11 (P04487) RNA-binding protein (Vmw21)
          Length = 161

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 25/68 (36%), Positives = 26/68 (37%)

Query: 60  PLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRT 119
           P VPR   VP  PR       PR    P VPR    P  PR+      PR    P   RT
Sbjct: 88  PRVPREPRVPRPPREPREPRVPRAPRDPRVPRDPRDPRQPRSPREPRSPREPRSPREPRT 147

Query: 120 REGPPVPR 127
              P  PR
Sbjct: 148 PRTPREPR 155



 Score = 37.0 bits (84), Expect = 0.026
 Identities = 23/68 (33%), Positives = 27/68 (38%), Gaps = 3/68 (4%)

Query: 60  PLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRT 119
           P +PR   VP  PR+      PR    P VPR    P +PR       PR+   P   R 
Sbjct: 82  PTIPRTPRVPREPRVPR---PPREPREPRVPRAPRDPRVPRDPRDPRQPRSPREPRSPRE 138

Query: 120 REGPPVPR 127
              P  PR
Sbjct: 139 PRSPREPR 146



 Score = 36.2 bits (82), Expect = 0.044
 Identities = 23/70 (32%), Positives = 26/70 (36%)

Query: 58  TGPLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVS 117
           T P  PR+   P VPR       PR+   P  PR    P  PR       PR+   P   
Sbjct: 83  TIPRTPRVPREPRVPRPPREPREPRVPRAPRDPRVPRDPRDPRQPRSPREPRSPREPRSP 142

Query: 118 RTREGPPVPR 127
           R    P  PR
Sbjct: 143 REPRTPRTPR 152



 Score = 35.0 bits (79), Expect = 0.097
 Identities = 22/63 (34%), Positives = 23/63 (35%)

Query: 60  PLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRT 119
           P  PR    P VPR       PR    P  PR+   P  PR       PRT   P   RT
Sbjct: 97  PRPPREPREPRVPRAPRDPRVPRDPRDPRQPRSPREPRSPREPRSPREPRTPRTPREPRT 156

Query: 120 REG 122
             G
Sbjct: 157 ARG 159



 Score = 31.2 bits (69), Expect = 1.4
 Identities = 19/61 (31%), Positives = 24/61 (39%)

Query: 71  VPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRTREGPPVPRRMA 130
           + + +E +  P +   P VPR    P  PR      VPR    P V R    P  PR   
Sbjct: 72  ISKPSEAVRPPTIPRTPRVPREPRVPRPPREPREPRVPRAPRDPRVPRDPRDPRQPRSPR 131

Query: 131 E 131
           E
Sbjct: 132 E 132


>BAG_STRAG (P27951) IgA FC receptor precursor (Beta antigen) (B
           antigen)
          Length = 1164

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 22/67 (32%), Positives = 30/67 (43%), Gaps = 3/67 (4%)

Query: 60  PLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRT 119
           P VP   + P  PR+ E   +P+  E P VP + + P  PR  E    P     P   +T
Sbjct: 851 PHVPESPKAPEAPRVPE---SPKTPEAPHVPESPKAPEAPRVPESPKTPEAPHVPESPKT 907

Query: 120 REGPPVP 126
            E P +P
Sbjct: 908 PEAPKIP 914



 Score = 39.3 bits (90), Expect = 0.005
 Identities = 20/67 (29%), Positives = 28/67 (40%)

Query: 60  PLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRT 119
           P  P++ E+P  P   +    P + E P  P     P  P+T E   VP + + P   R 
Sbjct: 830 PDTPKIPELPQAPDTPQAPDTPHVPESPKAPEAPRVPESPKTPEAPHVPESPKAPEAPRV 889

Query: 120 REGPPVP 126
            E P  P
Sbjct: 890 PESPKTP 896



 Score = 39.3 bits (90), Expect = 0.005
 Identities = 21/67 (31%), Positives = 30/67 (44%)

Query: 60  PLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRT 119
           P  P+  E P VP   +   APR+ E P  P     P  P+T E   +P   + P V + 
Sbjct: 866 PESPKTPEAPHVPESPKAPEAPRVPESPKTPEAPHVPESPKTPEAPKIPEPPKTPDVPKL 925

Query: 120 REGPPVP 126
            + P +P
Sbjct: 926 PDVPKLP 932



 Score = 38.5 bits (88), Expect = 0.009
 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 3/71 (4%)

Query: 60  PLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLV---PRTTEGPLV 116
           P  P+  E P VP   +   AP + E P  P     P  P+T E   V   P+T E P +
Sbjct: 854 PESPKAPEAPRVPESPKTPEAPHVPESPKAPEAPRVPESPKTPEAPHVPESPKTPEAPKI 913

Query: 117 SRTREGPPVPR 127
               + P VP+
Sbjct: 914 PEPPKTPDVPK 924



 Score = 37.7 bits (86), Expect = 0.015
 Identities = 20/67 (29%), Positives = 27/67 (39%)

Query: 60  PLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRT 119
           P  P+  + P VP   +   APR+ E P  P     P  P+  E   VP + + P     
Sbjct: 842 PDTPQAPDTPHVPESPKAPEAPRVPESPKTPEAPHVPESPKAPEAPRVPESPKTPEAPHV 901

Query: 120 REGPPVP 126
            E P  P
Sbjct: 902 PESPKTP 908



 Score = 37.7 bits (86), Expect = 0.015
 Identities = 19/65 (29%), Positives = 30/65 (45%), Gaps = 3/65 (4%)

Query: 63  PRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRTREG 122
           P   + P +P + +    P+  + P VP + + P  PR  E    P+T E P V  + + 
Sbjct: 827 PETPDTPKIPELPQAPDTPQAPDTPHVPESPKAPEAPRVPES---PKTPEAPHVPESPKA 883

Query: 123 PPVPR 127
           P  PR
Sbjct: 884 PEAPR 888



 Score = 37.7 bits (86), Expect = 0.015
 Identities = 22/67 (32%), Positives = 29/67 (42%), Gaps = 3/67 (4%)

Query: 60  PLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRT 119
           P  P   + P  P + E   AP     P  P+T E P +P + +    PR  E P   +T
Sbjct: 839 PQAPDTPQAPDTPHVPESPKAPEAPRVPESPKTPEAPHVPESPKAPEAPRVPESP---KT 895

Query: 120 REGPPVP 126
            E P VP
Sbjct: 896 PEAPHVP 902



 Score = 33.9 bits (76), Expect = 0.22
 Identities = 19/68 (27%), Positives = 29/68 (41%)

Query: 60  PLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRT 119
           P VP   + P  PR+ E    P     P  P+T E P +P   +   VP+  + P +   
Sbjct: 875 PHVPESPKAPEAPRVPESPKTPEAPHVPESPKTPEAPKIPEPPKTPDVPKLPDVPKLPDV 934

Query: 120 REGPPVPR 127
            + P  P+
Sbjct: 935 PKLPDAPK 942



 Score = 33.9 bits (76), Expect = 0.22
 Identities = 20/73 (27%), Positives = 33/73 (44%)

Query: 60  PLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRT 119
           P  P+  E P VP   +   AP + E P  P   + P  P+T +   +P   + P V + 
Sbjct: 878 PESPKAPEAPRVPESPKTPEAPHVPESPKTPEAPKIPEPPKTPDVPKLPDVPKLPDVPKL 937

Query: 120 REGPPVPRRMAEV 132
            + P +P  + +V
Sbjct: 938 PDAPKLPDGLNKV 950


>RNB_HHV1M (P56958) RNA-binding protein (Vmw21)
          Length = 161

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 26/77 (33%), Positives = 28/77 (35%), Gaps = 6/77 (7%)

Query: 60  PLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRT 119
           P VPR   VP  PR       PR    P VPR    P  PR+      PR    P   R 
Sbjct: 88  PRVPREPRVPRPPREPREPRVPRASRDPRVPRDPRDPRQPRS------PREPRSPREPRP 141

Query: 120 REGPPVPRRMAEVQLMR 136
              P  PR   E +  R
Sbjct: 142 PREPRTPRTTREPRTAR 158



 Score = 37.0 bits (84), Expect = 0.026
 Identities = 23/68 (33%), Positives = 28/68 (40%), Gaps = 3/68 (4%)

Query: 60  PLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRT 119
           P +PR   VP  PR+      PR    P VPR +  P +PR       PR+   P   R 
Sbjct: 82  PTIPRTPRVPREPRVPR---PPREPREPRVPRASRDPRVPRDPRDPRQPRSPREPRSPRE 138

Query: 120 REGPPVPR 127
              P  PR
Sbjct: 139 PRPPREPR 146



 Score = 35.4 bits (80), Expect = 0.074
 Identities = 21/54 (38%), Positives = 22/54 (39%)

Query: 60  PLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEG 113
           P VPR +  P VPR       PR    P  PR    P  PRT      PRT  G
Sbjct: 106 PRVPRASRDPRVPRDPRDPRQPRSPREPRSPREPRPPREPRTPRTTREPRTARG 159



 Score = 32.0 bits (71), Expect = 0.82
 Identities = 21/63 (33%), Positives = 23/63 (36%)

Query: 60  PLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRT 119
           P  PR    P VPR +     PR    P  PR+   P  PR       PRT       RT
Sbjct: 97  PRPPREPREPRVPRASRDPRVPRDPRDPRQPRSPREPRSPREPRPPREPRTPRTTREPRT 156

Query: 120 REG 122
             G
Sbjct: 157 ARG 159



 Score = 32.0 bits (71), Expect = 0.82
 Identities = 19/61 (31%), Positives = 25/61 (40%)

Query: 71  VPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRTREGPPVPRRMA 130
           + + +E +  P +   P VPR    P  PR      VPR +  P V R    P  PR   
Sbjct: 72  ISKPSEAVRPPTIPRTPRVPREPRVPRPPREPREPRVPRASRDPRVPRDPRDPRQPRSPR 131

Query: 131 E 131
           E
Sbjct: 132 E 132


>MUA1_XENLA (P10667) Integumentary mucin A.1 precursor (FIM-A.1)
           (Preprospasmolysin)
          Length = 400

 Score = 37.7 bits (86), Expect = 0.015
 Identities = 26/69 (37%), Positives = 27/69 (38%), Gaps = 3/69 (4%)

Query: 58  TGPLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVS 117
           T P  P  T VP  P   E    P   E   VP T E   +P T E   VP T E    S
Sbjct: 180 TVPTTPETTTVPTTP---ETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTAS 236

Query: 118 RTREGPPVP 126
            T E   VP
Sbjct: 237 TTAETTTVP 245



 Score = 37.4 bits (85), Expect = 0.020
 Identities = 22/69 (31%), Positives = 22/69 (31%)

Query: 58  TGPLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVS 117
           T P  P  T VP  P        P     P  P TT  P  P T      P TT  P   
Sbjct: 135 TVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTP 194

Query: 118 RTREGPPVP 126
            T   P  P
Sbjct: 195 ETTTVPTTP 203



 Score = 37.4 bits (85), Expect = 0.020
 Identities = 22/69 (31%), Positives = 22/69 (31%)

Query: 58  TGPLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVS 117
           T P  P  T VP  P        P     P  P TT  P  P T      P TT  P   
Sbjct: 162 TVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTP 221

Query: 118 RTREGPPVP 126
            T   P  P
Sbjct: 222 ETTTVPTTP 230



 Score = 37.4 bits (85), Expect = 0.020
 Identities = 22/69 (31%), Positives = 22/69 (31%)

Query: 58  TGPLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVS 117
           T P  P  T VP  P        P     P  P TT  P  P T      P TT  P   
Sbjct: 144 TVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTP 203

Query: 118 RTREGPPVP 126
            T   P  P
Sbjct: 204 ETTTVPTTP 212



 Score = 37.4 bits (85), Expect = 0.020
 Identities = 22/69 (31%), Positives = 22/69 (31%)

Query: 58  TGPLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVS 117
           T P  P  T VP  P        P     P  P TT  P  P T      P TT  P   
Sbjct: 153 TVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTP 212

Query: 118 RTREGPPVP 126
            T   P  P
Sbjct: 213 ETTTVPTTP 221



 Score = 33.9 bits (76), Expect = 0.22
 Identities = 21/78 (26%), Positives = 23/78 (28%)

Query: 49  LSLPVMGRMTGPLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVP 108
           ++ P     T       T VP  P        P     P  P TT  P  P T      P
Sbjct: 117 ITTPAPDTTTASTTAETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTP 176

Query: 109 RTTEGPLVSRTREGPPVP 126
            TT  P    T   P  P
Sbjct: 177 ETTTVPTTPETTTVPTTP 194



 Score = 33.9 bits (76), Expect = 0.22
 Identities = 20/66 (30%), Positives = 20/66 (30%)

Query: 58  TGPLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVS 117
           T P  P  T VP  P        P     P  P TT  P  P T        TT  P   
Sbjct: 189 TVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTASTTAETTTVPTTP 248

Query: 118 RTREGP 123
            T   P
Sbjct: 249 ETTTEP 254



 Score = 32.3 bits (72), Expect = 0.63
 Identities = 22/79 (27%), Positives = 24/79 (29%), Gaps = 5/79 (6%)

Query: 58  TGPLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVS 117
           T P  P  T VP  P        P     P  P TT       T      P TT  P  +
Sbjct: 198 TVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTASTTAETTTVPTTPETTTEPTTT 257

Query: 118 RTREG-----PPVPRRMAE 131
            T +      PP P    E
Sbjct: 258 PTTDTTPPTLPPTPETTTE 276


>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia
           protein 2 (ALL1-related protein)
          Length = 5262

 Score = 36.2 bits (82), Expect = 0.044
 Identities = 22/67 (32%), Positives = 26/67 (37%)

Query: 60  PLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRT 119
           PL P   E+P  P      L+P   E P+ P   E P+ P      L P   E PL    
Sbjct: 553 PLSPPPEELPTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEASRLFPPFEESPLSPPP 612

Query: 120 REGPPVP 126
            E P  P
Sbjct: 613 EESPLSP 619



 Score = 35.0 bits (79), Expect = 0.097
 Identities = 21/67 (31%), Positives = 25/67 (36%)

Query: 60  PLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRT 119
           P+ P   E P+ P      L P   E PL P   E PL P      L P   + P+    
Sbjct: 580 PMSPPPEESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPEASRLSPPPEDSPMSPPP 639

Query: 120 REGPPVP 126
            E P  P
Sbjct: 640 EESPMSP 646



 Score = 31.6 bits (70), Expect = 1.1
 Identities = 20/60 (33%), Positives = 22/60 (36%)

Query: 67  EVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRTREGPPVP 126
           E PL P      L+P   E PL P   E P  P      L P   E P+     E P  P
Sbjct: 533 ETPLSPPPEASPLSPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSPPPEESPMSP 592



 Score = 30.0 bits (66), Expect = 3.1
 Identities = 21/64 (32%), Positives = 27/64 (41%), Gaps = 4/64 (6%)

Query: 60  PLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRT 119
           PL P   E PL P      L+P   + P+ P   E P+ P       V R +  P+VSR 
Sbjct: 607 PLSPPPEESPLSPPPEASRLSPPPEDSPMSPPPEESPMSPPPE----VSRLSPLPVVSRL 662

Query: 120 REGP 123
              P
Sbjct: 663 SPPP 666


>WD33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)
          Length = 1336

 Score = 35.0 bits (79), Expect = 0.097
 Identities = 32/102 (31%), Positives = 44/102 (42%), Gaps = 10/102 (9%)

Query: 35  GMIIPQSDQDLILGLSLPV-------MGRMTGPLVPRMTEVPLVPRMAEGLLAPRMMEGP 87
           G + PQ  Q    GL  P        M R  GP  P   + P  P+ + G       +GP
Sbjct: 651 GFMGPQGPQGPPQGLPRPQDMHGPQGMQRHPGPHGPLGPQGPPGPQGSSGPQGHMGPQGP 710

Query: 88  LVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRTREGPPVPRRM 129
             P++  GP  P   +G L P   +GP  ++  +GPP PR M
Sbjct: 711 PGPQSHIGPQGPPGPQGHLGP---QGPPGTQGMQGPPGPRGM 749



 Score = 31.2 bits (69), Expect = 1.4
 Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 14/83 (16%)

Query: 59  GPLVPRMTEVPLVPRMAEGLLAPRM------MEGPLVPRTTEGPLMPRTMEGLLVPRTTE 112
           GP  P+    P  P   +G L P+       M+GP  PR  +GP  P  ++G    +  +
Sbjct: 709 GPPGPQSHIGPQGPPGPQGHLGPQGPPGTQGMQGPPGPRGMQGPPHPHGIQGGPGSQGIQ 768

Query: 113 GP--------LVSRTREGPPVPR 127
           GP        L  R  +GPP PR
Sbjct: 769 GPVSQGPLMGLNPRGMQGPPGPR 791



 Score = 30.0 bits (66), Expect = 3.1
 Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 22/93 (23%)

Query: 52  PVMGR----MTGPLVPRMTEVPLV--------------PRMAEGLLA--PRMMEGPLVPR 91
           P+MG     M GP  PR  + P                P    GLL   P+ M GP   R
Sbjct: 775 PLMGLNPRGMQGPPGPRENQGPAPQGMIMGHPPQEMRGPHPPGGLLGHGPQEMRGPQEIR 834

Query: 92  TTEGPLMPRTMEGLLVPRTTEGPLVSRTREGPP 124
             +GP    +M G   P+   GP  S++++GPP
Sbjct: 835 GMQGPPPQGSMLG--PPQELRGPPGSQSQQGPP 865


>APP1_SCHPO (Q9P7E8) App1 protein
          Length = 857

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 23/68 (33%), Positives = 31/68 (44%), Gaps = 9/68 (13%)

Query: 60  PLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRT 119
           P+ P   EVP VP+     +AP + E P VP+    P+ P       VP   + P V   
Sbjct: 578 PVAPVAPEVPSVPQPP---VAPVVPEAPSVPQPPVAPVAPE------VPSVPQRPAVPVV 628

Query: 120 REGPPVPR 127
            E P VP+
Sbjct: 629 PEAPSVPQ 636



 Score = 33.9 bits (76), Expect = 0.22
 Identities = 22/68 (32%), Positives = 30/68 (43%), Gaps = 9/68 (13%)

Query: 60  PLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRT 119
           P+ P   EVP VP+       P + E P VP+    P++P       VP   + P V   
Sbjct: 608 PVAPVAPEVPSVPQRP---AVPVVPEAPSVPQPPAAPVVPE------VPSVPQRPAVPVV 658

Query: 120 REGPPVPR 127
            E P VP+
Sbjct: 659 PEAPSVPQ 666



 Score = 33.5 bits (75), Expect = 0.28
 Identities = 23/71 (32%), Positives = 30/71 (41%), Gaps = 3/71 (4%)

Query: 60  PLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRT 119
           P VP+   VP+VP        P     P VP   + P+ P   E   VP+    P+    
Sbjct: 557 PSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAP-- 614

Query: 120 REGPPVPRRMA 130
            E P VP+R A
Sbjct: 615 -EVPSVPQRPA 624



 Score = 33.1 bits (74), Expect = 0.37
 Identities = 23/71 (32%), Positives = 30/71 (41%), Gaps = 3/71 (4%)

Query: 60  PLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRT 119
           P VP+    P+VP        P     P VP   + P +P   E   VP+    P+V   
Sbjct: 587 PSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVP-- 644

Query: 120 REGPPVPRRMA 130
            E P VP+R A
Sbjct: 645 -EVPSVPQRPA 654



 Score = 32.3 bits (72), Expect = 0.63
 Identities = 20/67 (29%), Positives = 26/67 (37%)

Query: 60  PLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRT 119
           P VP+   VP+VP        P     P VP   + P +P   E   VP+    P+V   
Sbjct: 617 PSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEV 676

Query: 120 REGPPVP 126
              P  P
Sbjct: 677 PSVPQPP 683



 Score = 32.0 bits (71), Expect = 0.82
 Identities = 21/67 (31%), Positives = 27/67 (39%), Gaps = 6/67 (8%)

Query: 60  PLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRT 119
           P VP + + P VP + E    P+    P+VP     P  P       VP   E P V + 
Sbjct: 614 PEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQRP------AVPVVPEAPSVPQP 667

Query: 120 REGPPVP 126
              P VP
Sbjct: 668 PAAPVVP 674



 Score = 30.8 bits (68), Expect = 1.8
 Identities = 19/68 (27%), Positives = 26/68 (37%)

Query: 60  PLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRT 119
           P VP   + P  P + E    P+    P+VP     P  P       VP   + P+    
Sbjct: 539 PEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAPVV 598

Query: 120 REGPPVPR 127
            E P VP+
Sbjct: 599 PEAPSVPQ 606



 Score = 30.0 bits (66), Expect = 3.1
 Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 6/67 (8%)

Query: 60  PLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRT 119
           P  P   EVP  P+      AP + E P VP+    P++P   E L VP+    P+    
Sbjct: 533 PAAPVAPEVPSAPQRPA---APVVPEAPSVPQRPAVPVVP---EALSVPQPPVAPVAPEV 586

Query: 120 REGPPVP 126
              P  P
Sbjct: 587 PSVPQPP 593



 Score = 29.6 bits (65), Expect = 4.1
 Identities = 19/67 (28%), Positives = 24/67 (35%)

Query: 60  PLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRT 119
           P VP+    P+VP        P     P VP   + P  P   E   VP+    P+V   
Sbjct: 512 PSVPQPPAAPVVPEAPSVHQPPAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEA 571

Query: 120 REGPPVP 126
              P  P
Sbjct: 572 LSVPQPP 578



 Score = 29.3 bits (64), Expect = 5.3
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 9/67 (13%)

Query: 60  PLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRT 119
           P VP+    P+VP +      P + + P VP   E P +P+     +VP   E P V + 
Sbjct: 632 PSVPQPPAAPVVPEV------PSVPQRPAVPVVPEAPSVPQPPAAPVVP---EVPSVPQP 682

Query: 120 REGPPVP 126
              P VP
Sbjct: 683 PAVPVVP 689


>RNB_HHV2H (P89479) Potential RNA-binding protein
          Length = 151

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 24/75 (32%), Positives = 28/75 (37%), Gaps = 1/75 (1%)

Query: 49  LSLPVMGRMTGPL-VPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLV 107
           LS+P       P  +PR   VP  PR+      PR+   P  PR    P  PR      V
Sbjct: 75  LSIPKPSEAVRPSRIPRAPRVPREPRVPREPREPRVPRSPREPRVPRIPRDPRPPRPPRV 134

Query: 108 PRTTEGPLVSRTREG 122
           PR    P   R   G
Sbjct: 135 PREPRPPREPRATRG 149



 Score = 32.0 bits (71), Expect = 0.82
 Identities = 20/57 (35%), Positives = 24/57 (42%)

Query: 80  APRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRTREGPPVPRRMAEVQLMR 136
           APR+   P VPR    P +PR+     VPR    P   R    P  PR   E +  R
Sbjct: 92  APRVPREPRVPREPREPRVPRSPREPRVPRIPRDPRPPRPPRVPREPRPPREPRATR 148



 Score = 32.0 bits (71), Expect = 0.82
 Identities = 22/76 (28%), Positives = 32/76 (41%), Gaps = 3/76 (3%)

Query: 52  PVMGRMTGPLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTT 111
           P  G+     + R+     +P+ +E +   R+   P VPR    P +PR      VPR+ 
Sbjct: 58  PAAGKRGDSGLLRVCAALSIPKPSEAVRPSRIPRAPRVPRE---PRVPREPREPRVPRSP 114

Query: 112 EGPLVSRTREGPPVPR 127
             P V R    P  PR
Sbjct: 115 REPRVPRIPRDPRPPR 130



 Score = 31.6 bits (70), Expect = 1.1
 Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 3/46 (6%)

Query: 60  PLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGL 105
           P VPR    P VPR+      PR    P VPR    P  PR   GL
Sbjct: 108 PRVPRSPREPRVPRIPRD---PRPPRPPRVPREPRPPREPRATRGL 150


>NFM_CHICK (P16053) Neurofilament triplet M protein (160 kDa
           neurofilament protein) (Neurofilament medium
           polypeptide) (NF-M)
          Length = 857

 Score = 32.3 bits (72), Expect = 0.63
 Identities = 19/66 (28%), Positives = 23/66 (34%)

Query: 61  LVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRTR 120
           + P     P  P   E +++P     P  PRT E P  P        PRT E P      
Sbjct: 650 ITPEKVRSPEKPTTPEKVVSPEKPASPEKPRTPEKPASPEKPATPEKPRTPEKPATPEKP 709

Query: 121 EGPPVP 126
             P  P
Sbjct: 710 RSPEKP 715



 Score = 31.6 bits (70), Expect = 1.1
 Identities = 22/76 (28%), Positives = 27/76 (34%), Gaps = 3/76 (3%)

Query: 52  PVMGRMTGPLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTT 111
           P   ++T P  P   E P  P  A   + P  +  P  P T E  + P        PRT 
Sbjct: 626 PATPKVTSPEKPATPEKPPTPEKA---ITPEKVRSPEKPTTPEKVVSPEKPASPEKPRTP 682

Query: 112 EGPLVSRTREGPPVPR 127
           E P        P  PR
Sbjct: 683 EKPASPEKPATPEKPR 698


>MY15_HUMAN (Q9UKN7) Myosin XV (Unconventional myosin-15)
          Length = 3530

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 32/99 (32%), Positives = 37/99 (37%), Gaps = 14/99 (14%)

Query: 16  GSRRRARS-----RSPRRSRYR-WVGMIIPQSDQDLILGLSL--------PVMGRMTGPL 61
           GSRRR  +      SPR SR R W  +  PQ       GL          P +   TGP 
Sbjct: 747 GSRRRGAAFGFPGASPRASRRRAWSPLASPQPSLRSSPGLGYCSPLAPPSPQLSLRTGPF 806

Query: 62  VPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPR 100
            P        PR  +   APR   G L P  +  P  PR
Sbjct: 807 QPPFLPPARRPRSLQESPAPRRAAGRLGPPGSPLPGSPR 845


>VGLD_HHV11 (Q69091) Glycoprotein D precursor
          Length = 394

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 7/91 (7%)

Query: 28  RSRYRWVGMIIPQSDQDLILGLSLPVMGRMTGPLVPRMTEVPLVPRMAEGLLAPRMMEGP 87
           RS+Y  V   +  +D +   G  LPV+ ++T P       V  V  +  GL  P   + P
Sbjct: 24  RSKYALVDASLKMADPNRFRGKDLPVLDQLTDP-----PGVRRVYHIQAGL--PDPFQPP 76

Query: 88  LVPRTTEGPLMPRTMEGLLVPRTTEGPLVSR 118
            +P T    ++ R    +L+   +E P + R
Sbjct: 77  SLPITVYYAVLERACRSVLLNAPSEAPQIVR 107


>SFR2_CAEEL (Q09511) Probable splicing factor, arginine/serine-rich
           2 (Splicing factor SC35) (SC-35) (Splicing component, 35
           kDa)
          Length = 196

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 18/35 (51%), Positives = 19/35 (53%), Gaps = 12/35 (34%)

Query: 10  GRSGGGGSRRR------------ARSRSPRRSRYR 32
           GR GGGG RR             +RSRSPRRSR R
Sbjct: 106 GRGGGGGRRRSRSPRRRSRSPRYSRSRSPRRSRSR 140



 Score = 30.4 bits (67), Expect = 2.4
 Identities = 17/28 (60%), Positives = 18/28 (63%), Gaps = 5/28 (17%)

Query: 10  GRSGGGGSRRRA-----RSRSPRRSRYR 32
           G  GGGG RRR+     RSRSPR SR R
Sbjct: 105 GGRGGGGGRRRSRSPRRRSRSPRYSRSR 132


>ESX1_HUMAN (Q8N693) Extraembryonic, spermatogenesis, homeobox
           1-like protein
          Length = 406

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 24/69 (34%), Positives = 29/69 (41%), Gaps = 3/69 (4%)

Query: 60  PLVPRMTEVPLVPRMAEGLLAPRMME---GPLVPRTTEGPLMPRTMEGLLVPRTTEGPLV 116
           P  PRM  VP  P MA     P M     GP + R   GP M R   G  +     GP +
Sbjct: 286 PPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMARVPPGPPMARVPPGPPMAPLPPGPPM 345

Query: 117 SRTREGPPV 125
           +    GPP+
Sbjct: 346 APLPPGPPM 354


>CA1G_MESAU (Q9JMH4) Collagen alpha 1(XVII) chain (Bullous
           pemphigoid antigen 2) (180 kDa bullous pemphigoid
           antigen 2)
          Length = 1431

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 17/48 (35%), Positives = 23/48 (47%)

Query: 77  GLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRTREGPP 124
           G+  P    GP  P+  +G +    MEG +  R  EGP+  R   GPP
Sbjct: 594 GIPGPLGHPGPEGPKGQKGSIGDPGMEGPIGQRGLEGPMGPRGEPGPP 641


>CA1G_HUMAN (Q9UMD9) Collagen alpha 1(XVII) chain (Bullous
           pemphigoid antigen 2) (180 kDa bullous pemphigoid
           antigen 2)
          Length = 1497

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 17/48 (35%), Positives = 23/48 (47%)

Query: 77  GLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRTREGPP 124
           G+  P    GP  P+  +G +    MEG +  R  EGP+  R   GPP
Sbjct: 591 GIPGPLGHPGPQGPKGQKGSVGDPGMEGPMGQRGREGPMGPRGEAGPP 638



 Score = 28.5 bits (62), Expect = 9.1
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 95  GPLMPRTMEGLLVPRTTEGPLVSRTREGPPVPR 127
           GP  P+  +G +     EGP+  R REGP  PR
Sbjct: 600 GPQGPKGQKGSVGDPGMEGPMGQRGREGPMGPR 632


>AD29_HUMAN (Q9UKF5) ADAM 29 precursor (A disintegrin and
           metalloproteinase domain 29)
          Length = 820

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 16/58 (27%), Positives = 27/58 (45%), Gaps = 1/58 (1%)

Query: 52  PVMGRMTGP-LVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVP 108
           PVM   + P L P  ++ P++P  +   L P   + P+ P   +  LMP   +  + P
Sbjct: 762 PVMPSQSHPQLTPSQSQPPVMPSQSHPQLTPSQSQPPVTPSQRQPQLMPSQSQPPVTP 819



 Score = 30.4 bits (67), Expect = 2.4
 Identities = 14/67 (20%), Positives = 29/67 (42%)

Query: 60  PLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRTTEGPLMPRTMEGLLVPRTTEGPLVSRT 119
           P+ P  +   ++P  ++  + P      L P  ++ P+MP      L P  ++ P+    
Sbjct: 744 PVTPSQSHPQVMPSQSQPPVMPSQSHPQLTPSQSQPPVMPSQSHPQLTPSQSQPPVTPSQ 803

Query: 120 REGPPVP 126
           R+   +P
Sbjct: 804 RQPQLMP 810


>Y168_ADE02 (P03292) Hypothetical protein C-168
          Length = 168

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 15/32 (46%), Positives = 18/32 (55%)

Query: 1  MRVTTSHGSGRSGGGGSRRRARSRSPRRSRYR 32
          +R + S  S   GGGG  RR R R+ RRS  R
Sbjct: 26 IRASPSSSSSGGGGGGGTRRRRRRTGRRSTKR 57


>SFRG_HUMAN (Q8N2M8) Splicing factor, arginine/serine-rich 16
           (Suppressor of white-apricot homolog 2)
          Length = 659

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 15/27 (55%), Positives = 16/27 (58%)

Query: 6   SHGSGRSGGGGSRRRARSRSPRRSRYR 32
           S    R GG G RRR+RSRS    RYR
Sbjct: 439 SRSPARRGGYGPRRRSRSRSHSGDRYR 465


>PTPZ_RAT (Q62656) Receptor-type protein-tyrosine phosphatase zeta
            precursor (EC 3.1.3.48) (R-PTP-zeta) (Phosphacan) (3F8
            chondroitin sulfate proteoglycan) (3H1 keratan sulfate
            proteoglycan)
          Length = 2316

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 16/85 (18%)

Query: 39   PQSDQDLILGLSLPVMGRMTGPLVPRMTEVPLVPRMAEGLLAPRMMEGPLVPRT---TEG 95
            P SD D +L  +LP     +GP  P +TE P+V + +  +  P   E      T   T  
Sbjct: 1195 PASDVDTLLKTALP-----SGPRDPVLTETPMVEQSSSSVSLPLASESASSKSTLHFTSV 1249

Query: 96   PLM--------PRTMEGLLVPRTTE 112
            P++        P +++ L VP + E
Sbjct: 1250 PVLNMSPSDVHPTSLQRLTVPHSRE 1274


>CA18_MOUSE (Q00780) Collagen alpha 1(VIII) chain precursor
          Length = 743

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 12/92 (13%)

Query: 26  PRRSRYRWVGMIIPQ---SDQDLILGLSLPVM--GRMTGPLVPRMTEVPLVPRMAEGLLA 80
           P+  +Y+ +G  +P        L +G  +P M  G+    L   M E+P VPRM + ++ 
Sbjct: 46  PQIPQYQPLGQQVPHMPLGKDGLSMGKEMPHMQYGKEYPHLPQYMKEIPPVPRMGKEVVP 105

Query: 81  PRMMEGPLV-------PRTTEGPLMPRTMEGL 105
            +  E PL        PR   GP  P    GL
Sbjct: 106 KKGKEVPLASLRGEQGPRGEPGPRGPPGPPGL 137


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.324    0.141    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,425,465
Number of Sequences: 164201
Number of extensions: 915405
Number of successful extensions: 3581
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 3244
Number of HSP's gapped (non-prelim): 233
length of query: 184
length of database: 59,974,054
effective HSP length: 104
effective length of query: 80
effective length of database: 42,897,150
effective search space: 3431772000
effective search space used: 3431772000
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)