BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147202.5 - phase: 0
(389 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
POFA_SCHPO (Q9P7W4) F-box/WD-repeat protein pof10 (Skp1-binding ... 37 0.066
R8L2_ARATH (Q9MAG6) Probable disease resistance RPP8-like protein 2 36 0.15
AMPN_LACLA (Q48656) Aminopeptidase N (EC 3.4.11.2) (Lysyl aminop... 35 0.33
YKK7_CAEEL (P34284) Hypothetical F-box/LRR-repeat protein C02F5.... 34 0.73
TEP1_HUMAN (Q99973) Telomerase protein component 1 (Telomerase-a... 33 0.95
FX34_HUMAN (Q9NWN3) F-box only protein 34 33 0.95
FBW7_MOUSE (Q8VBV4) F-box/WD-repeat protein 7 (F-box and WD-40 d... 33 1.2
FBW7_HUMAN (Q969H0) F-box/WD-repeat protein 7 (F-box and WD-40 d... 33 1.2
UFO_ARATH (Q39090) UNUSUAL FLORAL ORGANS protein 33 1.6
FXLC_HUMAN (Q9NXK8) F-box/LRR-repeat protein 12 (F-box and leuci... 33 1.6
FX22_HUMAN (Q8NEZ5) F-box only protein 22 (F-box protein FBX22p44) 33 1.6
FX18_MOUSE (Q8K2I9) F-box only protein 18 (EC 3.6.1.-) (F-box DN... 33 1.6
FX18_HUMAN (Q8NFZ0) F-box only protein 18 (EC 3.6.1.-) (F-box DN... 33 1.6
PARC_HUMAN (Q8IWT3) p53-associated parkin-like cytoplasmic prote... 32 2.1
FBX2_HUMAN (Q9UK22) F-box only protein 2 32 2.1
FX46_MOUSE (Q8BG80) F-box only protein 46 (F-box only protein 34... 32 3.6
FX46_HUMAN (Q6PJ61) F-box only protein 46 (F-box only protein 34... 32 3.6
MY52_SCHPO (O94477) Myosin 52 (Myosin type V-2) 31 4.7
FXLC_MOUSE (Q9EPX5) F-box/LRR-repeat protein 12 (F-box and leuci... 31 4.7
YPX5_CAEEL (Q09277) Hypothetical protein F40H6.5 in chromosome III 31 6.2
>POFA_SCHPO (Q9P7W4) F-box/WD-repeat protein pof10 (Skp1-binding
protein 2)
Length = 662
Score = 37.4 bits (85), Expect = 0.066
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 2 NLSPPKSQQPPSNVASSPIILPLDLITELLSFLPVKSLLQFRCVCMSWKILISD 55
NL +N + + LP +++ + SFL +SLL +C C WK L+SD
Sbjct: 14 NLRRMNRDHSSNNTNRTVLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSD 67
>R8L2_ARATH (Q9MAG6) Probable disease resistance RPP8-like protein 2
Length = 1271
Score = 36.2 bits (82), Expect = 0.15
Identities = 52/200 (26%), Positives = 78/200 (39%), Gaps = 35/200 (17%)
Query: 25 DLITELLSFLPVKSLLQFRCVCMSWKILISDSFFVKLHLQRSIQNPRLAVTQESRECSMD 84
D+I EL+ P KS+ +FRCV S + + L +S+ PRL E + +
Sbjct: 913 DIIFELV---PAKSIARFRCVSES---IHRRPDVTEQSLTKSMSRPRLLFALEVNK-DLL 965
Query: 85 VIVSPTSLSHLLENPSKPTTLTNDPYYSLNDKDCRSVAGSCNGLLCLLGLSEDREMWLRF 144
SP +NP ++L PY + + GL+ L + WLR
Sbjct: 966 FFSSPQP-----QNPYDNSSLVATPYKRFPKYLPTRICTTLGGLVFL-------QKWLR- 1012
Query: 145 WNPATRAISDKL-GHY----PADFTGGFEVAFGYDNSTDTYKVVYLQKGMTG-------- 191
TR I + + G Y TG E FG+D T +KV+ + G
Sbjct: 1013 --KKTRVICNPVSGDYITLPKVKATGVGESYFGFDPITKQFKVLCMTWSRYGTPNTHQVL 1070
Query: 192 VFSLGDNVWRNIESFPLGYY 211
G +WR I+ L +Y
Sbjct: 1071 TLETGKRLWRTIQDPILPHY 1090
>AMPN_LACLA (Q48656) Aminopeptidase N (EC 3.4.11.2) (Lysyl
aminopeptidase) (Lys-AP) (Alanine aminopeptidase)
Length = 848
Score = 35.0 bits (79), Expect = 0.33
Identities = 22/85 (25%), Positives = 41/85 (47%), Gaps = 2/85 (2%)
Query: 60 KLHLQRSIQNP--RLAVTQESRECSMDVIVSPTSLSHLLENPSKPTTLTNDPYYSLNDKD 117
K ++R QN RL + E D +V T+LS+L+E +PT L + + ++
Sbjct: 610 KALVRRQFQNDFERLGFDAKEGESDEDEMVRQTALSYLIEADYQPTVLAAANVFQAHKEN 669
Query: 118 CRSVAGSCNGLLCLLGLSEDREMWL 142
S+ S GL+ + + ++ + L
Sbjct: 670 IESIPASIRGLVLINQMKQENSLSL 694
>YKK7_CAEEL (P34284) Hypothetical F-box/LRR-repeat protein C02F5.7
in chromosome III
Length = 461
Score = 33.9 bits (76), Expect = 0.73
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 12 PSNVASSPI--ILPLDLITELLSFLPVKSLLQFRCVCMSWKILISD 55
P+ V +S I +LP +++ ++ SFL K+L + VC SW IL D
Sbjct: 48 PAQVDNSLINRVLPKEVLLKVFSFLDTKALCRSAQVCRSWSILALD 93
>TEP1_HUMAN (Q99973) Telomerase protein component 1
(Telomerase-associated protein 1) (Telomerase protein 1)
(p240) (p80 telomerase homolog)
Length = 2627
Score = 33.5 bits (75), Expect = 0.95
Identities = 22/79 (27%), Positives = 35/79 (43%), Gaps = 3/79 (3%)
Query: 62 HLQRSIQNPRLAVTQESRECSMDVIVSPTSLSHLLENPSKPTTLTNDPYYSLNDK---DC 118
H R + PR Q+S S+ V SPT+++ N Y L+ + +
Sbjct: 1652 HTLRWLNKPRTMKNQQSSSLSLAVSSSPTAVAFSTNGQRAAVGTANGTVYLLDLRTWQEE 1711
Query: 119 RSVAGSCNGLLCLLGLSED 137
+SV C+G+ L LS+D
Sbjct: 1712 KSVVSGCDGISACLFLSDD 1730
>FX34_HUMAN (Q9NWN3) F-box only protein 34
Length = 305
Score = 33.5 bits (75), Expect = 0.95
Identities = 29/134 (21%), Positives = 54/134 (39%), Gaps = 10/134 (7%)
Query: 22 LPLDLITELLSFLPVKSLLQFRCVCMSWKILISDSFFVKLHLQRSIQNPRLAVTQESREC 81
LP ++ ++ LP KSL+ +C C +K +I + + ++ R +++PR ++C
Sbjct: 172 LPHHIMVKIFRLLPTKSLVALKCTCCYFKFII-EYYNIRPADSRWVRDPRYR-EDPCKQC 229
Query: 82 SMDVIVSPTSLSHLLENPSKPTTLTNDPYYSLNDKDCRSVAGSCNGLLCLLGLSEDREMW 141
+ SL P Y+ + + G C LGL ++ W
Sbjct: 230 KKKYVKGDVSLCRWHPKPYCQALPYGPGYWMCCHRSQKGFPG------CKLGLHDNH--W 281
Query: 142 LRFWNPATRAISDK 155
+ + RAI K
Sbjct: 282 VPACHSFNRAIHKK 295
>FBW7_MOUSE (Q8VBV4) F-box/WD-repeat protein 7 (F-box and WD-40
domain protein 7) (F-box protein FBW7) (F-box protein
Fbxw6) (F-box-WD40 repeat protein 6) (SEL-10)
Length = 629
Score = 33.1 bits (74), Expect = 1.2
Identities = 16/36 (44%), Positives = 21/36 (57%)
Query: 21 ILPLDLITELLSFLPVKSLLQFRCVCMSWKILISDS 56
+LP +L +LSFL K LLQ C W+IL D+
Sbjct: 205 LLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDN 240
>FBW7_HUMAN (Q969H0) F-box/WD-repeat protein 7 (F-box and WD-40
domain protein 7) (F-box protein FBX30) (hCdc4)
(Archipelago homolog) (hAgo) (SEL-10)
Length = 707
Score = 33.1 bits (74), Expect = 1.2
Identities = 16/36 (44%), Positives = 21/36 (57%)
Query: 21 ILPLDLITELLSFLPVKSLLQFRCVCMSWKILISDS 56
+LP +L +LSFL K LLQ C W+IL D+
Sbjct: 283 LLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDN 318
>UFO_ARATH (Q39090) UNUSUAL FLORAL ORGANS protein
Length = 442
Score = 32.7 bits (73), Expect = 1.6
Identities = 14/43 (32%), Positives = 26/43 (59%)
Query: 22 LPLDLITELLSFLPVKSLLQFRCVCMSWKILISDSFFVKLHLQ 64
LP L+ +++FLP + + RCVC + L+ + F++ +LQ
Sbjct: 50 LPPPLLDRVIAFLPPPAFFRTRCVCKRFYSLLFSNTFLETYLQ 92
>FXLC_HUMAN (Q9NXK8) F-box/LRR-repeat protein 12 (F-box and
leucine-rich repeat protein 12) (F-box protein FBL12)
Length = 326
Score = 32.7 bits (73), Expect = 1.6
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 22 LPLDLITELLSFLPVKSLLQFRCVCMSWKILISD 55
LP ++ E+ S+LPV+ ++ VC WK L+ D
Sbjct: 7 LPDSVLLEIFSYLPVRDRIRISRVCHRWKRLVDD 40
>FX22_HUMAN (Q8NEZ5) F-box only protein 22 (F-box protein
FBX22p44)
Length = 403
Score = 32.7 bits (73), Expect = 1.6
Identities = 11/26 (42%), Positives = 19/26 (72%)
Query: 25 DLITELLSFLPVKSLLQFRCVCMSWK 50
+++ +L+FLP K+LL+ CVC W+
Sbjct: 28 EVVERVLTFLPAKALLRVACVCRLWR 53
>FX18_MOUSE (Q8K2I9) F-box only protein 18 (EC 3.6.1.-) (F-box DNA
helicase 1)
Length = 1042
Score = 32.7 bits (73), Expect = 1.6
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 19/96 (19%)
Query: 9 QQPPSNVASSPIILPLDLITELLSFLPVKSLL-QFRCVCMSWKILISDSFFV---KLHLQ 64
Q+ PS++ LP +++ + +FLPV+ L VC W+ +I+D F+ KL+
Sbjct: 204 QEVPSHICR----LPSEVLRHIFAFLPVEDLYWNLSLVCHLWREIINDPLFIPWKKLY-- 257
Query: 65 RSIQNPRLAVTQESRECSMDVIVSPTSLSHLLENPS 100
R + +E +D I+S SH +E S
Sbjct: 258 -----HRYLINEEQAVSKVDGILS----SHGIEKDS 284
>FX18_HUMAN (Q8NFZ0) F-box only protein 18 (EC 3.6.1.-) (F-box DNA
helicase 1)
Length = 1043
Score = 32.7 bits (73), Expect = 1.6
Identities = 19/58 (32%), Positives = 31/58 (52%), Gaps = 3/58 (5%)
Query: 22 LPLDLITELLSFLPVKSLL-QFRCVCMSWKILISDSFFV--KLHLQRSIQNPRLAVTQ 76
LP +++ + +FLPV+ L VC W+ +ISD F+ K R + N AV++
Sbjct: 215 LPSEVLRHVFAFLPVEDLYWNLSLVCHLWREIISDPLFIPWKKLYHRYLMNEEQAVSK 272
>PARC_HUMAN (Q8IWT3) p53-associated parkin-like cytoplasmic protein
(UbcH7 associated protein 1)
Length = 2517
Score = 32.3 bits (72), Expect = 2.1
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 24 LDLITELLSFLPVKSLLQFRCVCMSWKILISDSFFVKLHLQRSIQNPRLAVTQESRECSM 83
L+L T L L ++LL+ R + S ++L +D + L R IQ LA+ Q S +
Sbjct: 2372 LELHTNALQILLEETLLRCRDLASSLRLLRADCLSTGMELLRRIQERLLAILQHSAQDFR 2431
Query: 84 DVIVSPTSLSHLLENPSKP 102
+ SP+ + + P+ P
Sbjct: 2432 VGLQSPSVEAWEAKGPNMP 2450
>FBX2_HUMAN (Q9UK22) F-box only protein 2
Length = 296
Score = 32.3 bits (72), Expect = 2.1
Identities = 28/97 (28%), Positives = 43/97 (43%), Gaps = 4/97 (4%)
Query: 6 PKSQQPPSNVASSPII--LPLDLITELLSFLPVKSLLQF-RCVCMSWKILISDSFFVKLH 62
P+ QQ A++ + LP L+ +L+ LP L+Q R VC+ WK L+ + L
Sbjct: 32 PEDQQEEEAAAAAAYLDELPEPLLLRVLAALPAAELVQACRLVCLRWKELVDGAPLWLLK 91
Query: 63 LQRSIQNPRLAVTQESRECSMDVIVSPTSLSHLLENP 99
Q+ P V +E +S +LL NP
Sbjct: 92 CQQEGLVPEGGVEEERDHWQQFYFLSKRR-RNLLRNP 127
>FX46_MOUSE (Q8BG80) F-box only protein 46 (F-box only protein
34-like)
Length = 603
Score = 31.6 bits (70), Expect = 3.6
Identities = 15/51 (29%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 20 IILPLDLITELLSFLPVKSLLQFRCVCMSWKILISDSFFVKLHLQRSIQNP 70
++LP ++ ++ SFLP ++L +C C +K +I ++F V+ R ++P
Sbjct: 474 LLLPEHVLVKIFSFLPTRALAALKCTCHHFKGII-EAFGVRATDSRWSRDP 523
>FX46_HUMAN (Q6PJ61) F-box only protein 46 (F-box only protein
34-like)
Length = 646
Score = 31.6 bits (70), Expect = 3.6
Identities = 15/51 (29%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 20 IILPLDLITELLSFLPVKSLLQFRCVCMSWKILISDSFFVKLHLQRSIQNP 70
++LP ++ ++ SFLP ++L +C C +K +I ++F V+ R ++P
Sbjct: 474 LLLPEHVLVKIFSFLPTRALAALKCTCHHFKGII-EAFGVRATDSRWSRDP 523
>MY52_SCHPO (O94477) Myosin 52 (Myosin type V-2)
Length = 1516
Score = 31.2 bits (69), Expect = 4.7
Identities = 23/89 (25%), Positives = 41/89 (45%), Gaps = 10/89 (11%)
Query: 300 WKMMDYGDDDSWTQLLEINLQILKKIDEWSAWVPLHLSKNYDTLILGSTLEHEFAVYNLR 359
W +DY D+ ++E L IL +DE +P + +N+ + + + + EF
Sbjct: 504 WSYIDYQDNQQCISMIESRLGILSLLDE-ECRMPTNSDENWVSKLNDAFSKPEF------ 556
Query: 360 DGSIEKTRITNGESSWIYINDYVESLVFC 388
S +K+R N E + I Y +V+C
Sbjct: 557 KNSYQKSRFGNKEFT---IKHYALDVVYC 582
>FXLC_MOUSE (Q9EPX5) F-box/LRR-repeat protein 12 (F-box and
leucine-rich repeat protein 12) (F-box protein FBL12)
Length = 326
Score = 31.2 bits (69), Expect = 4.7
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 22 LPLDLITELLSFLPVKSLLQFRCVCMSWKILISD 55
LP ++ E+ S+LPV+ ++ VC WK L+ D
Sbjct: 7 LPDLVLLEIFSYLPVRDRIRISRVCHRWKRLVDD 40
>YPX5_CAEEL (Q09277) Hypothetical protein F40H6.5 in chromosome III
Length = 1216
Score = 30.8 bits (68), Expect = 6.2
Identities = 17/58 (29%), Positives = 26/58 (44%)
Query: 53 ISDSFFVKLHLQRSIQNPRLAVTQESRECSMDVIVSPTSLSHLLENPSKPTTLTNDPY 110
+S+ F L S NP +++T S I + T++SH + S T T PY
Sbjct: 598 VSNPFITTYSLPSSPNNPFISITTTPDSASSQKISTTTAISHSAYSASPSTIPTTTPY 655
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.322 0.139 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,482,644
Number of Sequences: 164201
Number of extensions: 2228777
Number of successful extensions: 4544
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 4527
Number of HSP's gapped (non-prelim): 26
length of query: 389
length of database: 59,974,054
effective HSP length: 112
effective length of query: 277
effective length of database: 41,583,542
effective search space: 11518641134
effective search space used: 11518641134
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 67 (30.4 bits)
Medicago: description of AC147202.5