BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC147178.1 - phase: 0 
         (79 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

DP1_MOUSE (Q60870) Polyposis locus protein 1 homolog (TB2 protei...    37  0.012
DP1_HUMAN (Q00765) Polyposis locus protein 1 (TB2 protein)             35  0.035
UPPP_METKA (Q8TW25) Undecaprenyl-diphosphatase (EC 3.6.1.27) (Un...    27  7.2
RCSA_ERWST (P27488) Colanic acid capsular biosynthesis activatio...    27  9.4

>DP1_MOUSE (Q60870) Polyposis locus protein 1 homolog (TB2 protein
          homolog) (GP106)
          Length = 185

 Score = 36.6 bits (83), Expect = 0.012
 Identities = 15/32 (46%), Positives = 19/32 (58%)

Query: 33 CCSVGIGLPVYSTFKAIESKNQDAQQRCLVYW 64
          C  +G G P Y + KAIES N+D   + L YW
Sbjct: 55 CNLIGFGYPAYISMKAIESPNKDDDTQWLTYW 86


>DP1_HUMAN (Q00765) Polyposis locus protein 1 (TB2 protein)
          Length = 185

 Score = 35.0 bits (79), Expect = 0.035
 Identities = 14/32 (43%), Positives = 19/32 (58%)

Query: 33 CCSVGIGLPVYSTFKAIESKNQDAQQRCLVYW 64
          C  +G G P Y + KAIES N++   + L YW
Sbjct: 55 CNLIGFGYPAYISIKAIESPNKEDDTQWLTYW 86


>UPPP_METKA (Q8TW25) Undecaprenyl-diphosphatase (EC 3.6.1.27)
           (Undecaprenyl pyrophosphate phosphatase)
          Length = 269

 Score = 27.3 bits (59), Expect = 7.2
 Identities = 13/29 (44%), Positives = 17/29 (57%), Gaps = 1/29 (3%)

Query: 23  LGSHVVIRTACCSVGIGLPVYSTFKAIES 51
           LG   ++ T C +V +GLPVY   K I S
Sbjct: 84  LGLFAIVATVCTAV-VGLPVYKVLKGIFS 111


>RCSA_ERWST (P27488) Colanic acid capsular biosynthesis activation
          protein A
          Length = 211

 Score = 26.9 bits (58), Expect = 9.4
 Identities = 16/51 (31%), Positives = 24/51 (46%), Gaps = 7/51 (13%)

Query: 28 VIRTACCSVGIGLPVYSTFKAIESKN-------QDAQQRCLVYWAGLNFIN 71
          +I  +C    +GL  Y + K ++ KN       +  QQRC     G+ FIN
Sbjct: 4  IIMDSCNYTRLGLSDYMSSKGVKKKNITSVSDIEQLQQRCEQLKPGVVFIN 54


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.325    0.141    0.446 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,979,815
Number of Sequences: 164201
Number of extensions: 304201
Number of successful extensions: 545
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 543
Number of HSP's gapped (non-prelim): 4
length of query: 79
length of database: 59,974,054
effective HSP length: 55
effective length of query: 24
effective length of database: 50,942,999
effective search space: 1222631976
effective search space used: 1222631976
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)