BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147012.5 + phase: 0
(789 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DD37_HUMAN (Q8IY37) Probable ATP-dependent helicase DHX37 (DEAH-... 306 1e-82
YKQ0_CAEEL (P34305) Putative ATP-dependent RNA helicase C06E1.10... 277 9e-74
DHR1_YEAST (Q04217) Probable ATP-dependent RNA helicase DHR1 (DE... 270 1e-71
KZ_DROME (O46072) Probable ATP-dependent helicase kurz 264 6e-70
YK16_SCHPO (Q9HDY4) Putative ATP-dependent RNA helicase PB1A10.0... 259 2e-68
PR16_SCHPO (Q9P774) Pre-mRNA splicing factor RNA helicase prp16 ... 187 1e-46
DHX8_SCHPO (O42643) Putative pre-mRNA splicing factor ATP-depend... 184 8e-46
MOG5_CAEEL (Q09530) Probable pre-mRNA splicing factor ATP-depend... 179 3e-44
DHX8_HUMAN (Q14562) ATP-dependent helicase DHX8 (RNA helicase HR... 176 2e-43
DD16_PANTR (Q7YR39) Putative pre-mRNA splicing factor RNA helica... 176 2e-43
DD16_HUMAN (O60231) Putative pre-mRNA splicing factor RNA helica... 176 2e-43
PR22_YEAST (P24384) Pre-mRNA splicing factor RNA helicase PRP22 170 2e-41
DHX8_ARATH (Q38953) Putative pre-mRNA splicing factor ATP-depend... 170 2e-41
PR16_YEAST (P15938) Pre-mRNA splicing factor RNA helicase PRP16 ... 161 5e-39
PR16_HUMAN (Q92620) Pre-mRNA splicing factor ATP-dependent RNA h... 161 5e-39
MOG1_CAEEL (P34498) Probable pre-mRNA splicing factor ATP-depend... 160 1e-38
CC28_SCHPO (Q10752) Putative ATP-dependent RNA helicase cdc28 159 2e-38
MOG4_CAEEL (O45244) Probable pre-mRNA splicing factor ATP-depend... 155 5e-37
DD35_CAEEL (Q9BKQ8) Probable ATP-dependent helicase DHX35 homolog 153 2e-36
DHX9_HUMAN (Q08211) ATP-dependent RNA helicase A (Nuclear DNA he... 140 2e-32
>DD37_HUMAN (Q8IY37) Probable ATP-dependent helicase DHX37 (DEAH-box
protein 37)
Length = 1157
Score = 306 bits (785), Expect = 1e-82
Identities = 204/622 (32%), Positives = 308/622 (48%), Gaps = 73/622 (11%)
Query: 151 LFVLPLYAMLPAAAQLRVFDGVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKNYD 210
L VLPLY++L Q +VF EG RL VVATNVAETSLTIPGIKYVVD G+ K + YD
Sbjct: 588 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYD 647
Query: 211 SSNGMETYEVKWISKASAAQRAGRAGRTAAGHCYRLYSSAAFSNEFPEFSPAEVEKVPVH 270
G+ ++ V W+S+ASA QRAGRAGRT GHCYRLYSSA F +F +F P E+ + PV
Sbjct: 648 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVF-GDFEQFPPPEITRRPVE 706
Query: 271 GVVLLLKSMQIKKVANFPFPTSLKAASLLEAENCLRALEALDSKDE-------------- 316
++L +K++ ++KV NFPFPT +LL AE L AL AL +
Sbjct: 707 DLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQENRLSC 766
Query: 317 -LTLLGKAMALYPLSPRHSRMILTVIKNTRYKHIRNSSLLLAYAVAAAAALSLPNPFVMQ 375
+T LG+ MA +P++PR+++M+ + L YA+ A++++ F
Sbjct: 767 PITALGRTMATFPVAPRYAKMLA----------LSRQHGCLPYAITIVASMTVRELF--- 813
Query: 376 YEGNDSNKDSETSEKSRMGDNENNIDKTEKTKRKKLKQTSKVAREKFRIVSSDALAIAYA 435
E ++ D E K+++ + ++K+T A + + D + + A
Sbjct: 814 ----------EELDRPAASDEELTRLKSKRARVAQMKRT--WAGQGASLKLGDLMVLLGA 861
Query: 436 LQCFEHSQNSVQFCEDNALHFKTMDEMSKLRQQLLRLVFFQNDKGGLEQEYSWTHVTLED 495
+ E++ + QFCE N L +K M E+ +LR QL V + L + T
Sbjct: 862 VGACEYASCTPQFCEANGLRYKAMMEIRRLRGQLTTAVNAVCPEAELFVDPKMQPPTESQ 921
Query: 496 VEHVWRVSSAHYPLPLVEERLICRAICAGWADRVAKRIPISKAVDGETISRAGRYQSCMV 555
V ++ ++ + AG D +A+R+ + ++ + Y++ ++
Sbjct: 922 VTYLRQI------------------VTAGLGDHLARRVQSEEMLEDKW---RNAYKTPLL 960
Query: 556 DESIFIHRWSSVSTVHPEFLVYNELLETKRPNKEGETSAKRAYMHGVTNVDPTWLVENAK 615
D+ +FIH S + PEF+VY E++ET + YM GV++V+ W+
Sbjct: 961 DDPVFIHPSSVLFKELPEFVVYQEIVET-----------TKMYMKGVSSVEVQWIPALLP 1009
Query: 616 SSCIFSPPLTDPRPFYDAQADQVKCWVIPTFGRFCWELPKHSIPISNVEHRVQVFAYALL 675
S C F PL +P P Y + +V C F R W LP + R + FA LL
Sbjct: 1010 SYCQFDKPLEEPAPTYCPERGRVLCHRASVFYRVGWPLPAIEVDFPEGIDRYKHFARFLL 1069
Query: 676 EGQVCTCLKSVRKYMSAPPETILRREALGQKRVGNLISKLNSRLIDSSAMLRIVWKQNPR 735
EGQV L S R + + P T+L+ A Q R +L+ L + D L WK+NP+
Sbjct: 1070 EGQVFRKLASYRSCLLSSPGTMLKTWARLQPRTESLLRALVAEKADCHEALLAAWKKNPK 1129
Query: 736 ELFSEILDWFQQGFRKHFEELW 757
L +E +W Q E+ W
Sbjct: 1130 YLLAEYCEWLPQAMHPDIEKAW 1151
>YKQ0_CAEEL (P34305) Putative ATP-dependent RNA helicase C06E1.10 in
chromosome III (EC 3.6.1.-)
Length = 1148
Score = 277 bits (708), Expect = 9e-74
Identities = 203/641 (31%), Positives = 307/641 (47%), Gaps = 68/641 (10%)
Query: 124 NTEDSLDQSKVGREKIARENHDSSPGALFVLPLYAMLPAAAQLRVFDGVKEGERLVVVAT 183
N + L KV I D P L+ LPLY++L Q RVFD G RL V++T
Sbjct: 551 NGDGDLSDGKV-ENSIGAPPADCEP--LYCLPLYSLLSMGKQRRVFDETPAGMRLCVIST 607
Query: 184 NVAETSLTIPGIKYVVDTGREKVKNYDSSNGMETYEVKWISKASAAQRAGRAGRTAAGHC 243
NVAETSLTIPG+KYV+D G EK + YDS G+ + V IS+AS QRAGRAGR +AGH
Sbjct: 608 NVAETSLTIPGVKYVIDGGFEKRRLYDSITGVSRFAVCRISQASGDQRAGRAGRISAGHA 667
Query: 244 YRLYSSAAFSNEFPEFSPAEVEKVPVHGVVLLLKSMQIKKVANFPFPTSLKAASLLEAEN 303
YRLYSSA + +F +F+ E+ P +VL LKSM I KV NFPFP++ L AE
Sbjct: 668 YRLYSSAVY-QDFVKFADPEILSKPADQLVLHLKSMNIVKVVNFPFPSAPDEQMLESAEK 726
Query: 304 CLRALEALD-------SKDELTLLGKAMALYPLSPRHSRMILTVIKNTRYKHIRNSSLLL 356
L L AL ++ +T LGK +A++PL+P +++ I ++ L+
Sbjct: 727 RLCRLGALSESTKNGKTEARITKLGKTLAVFPLAPSYAKFIAMADQHN----------LM 776
Query: 357 AYAVAAAAALSLPNPFVMQYEGNDSNKDSETSEKSRMGDNENNIDKTEKTKRKKLKQTSK 416
++A+ + LS+ P + S GD ++T++ + LK+ +
Sbjct: 777 SHAILLISLLSVREPLI--------------PVSSLRGDTP---EETKELMKNVLKERRR 819
Query: 417 VAREKFRIVSSDALAIAYALQCFEHSQNSVQFCEDNALHFKTMDEMSKLRQQLLRLVFFQ 476
D + +A E + + + CE L K + E KLRQQL +V
Sbjct: 820 WCSHTGARRLGDLKVLMHAASVAEQIKYNARECEKVGLRVKALVEARKLRQQLTNIVNAS 879
Query: 477 NDKGGLEQEYSWTHVTLEDVEHVWRVSSAHYPLPLVEERLICRAICAGWADRVAKRIPIS 536
K EH + S P + +L+ + + A ++DR+A+R +
Sbjct: 880 CKK-----------------EHAAALDSDLPPPTDQQAQLLRQMVVASFSDRLARR--VD 920
Query: 537 KAVDGETISRAGRYQSCMVDESIFIHRWSSVSTVHPEFLVYNELLETKRPNKEGETSAKR 596
++V E + + G Y++ ++ +FI S V T PEF++Y EL++ ++
Sbjct: 921 RSVGQEEVQK-GAYETTLIKGHVFIDPCSVVFTEEPEFVIYQELVQVN----------EK 969
Query: 597 AYMHGVTNVDPTWLVENAKSSCIFSPPLTDPRPFYDAQADQVKCWVIPTFGRFCWELPKH 656
M V VD WL A+S C + + P YD D V V TFG WELP
Sbjct: 970 KLMTSVCAVDKEWLSRLAESYCNYGEQDKNQEPIYDPVKDMVVKTVKVTFGPLNWELPNE 1029
Query: 657 SIPISNVEHRVQVFAYALLEGQVCTCLKSVRKYMSAPPETILRREALGQKRVGNLISKLN 716
+ + + + FA LL+G V LK + APP T+++ A QKR L++KL
Sbjct: 1030 NRSVPHDIMMYRYFALFLLDGLVFEKLKEYTPKLLAPPSTMVKSWAKLQKRTEMLLNKLI 1089
Query: 717 SRLIDSSAMLRIVWKQNPRELFSEILDWFQQGFRKHFEELW 757
+ + + + L+ W +N L E L+W + + +W
Sbjct: 1090 EKEVTTRSSLKEQWLKNENWLLEEYLEWVPESVHQQISLMW 1130
>DHR1_YEAST (Q04217) Probable ATP-dependent RNA helicase DHR1
(DEAH-box RNA helicase DHR1)
Length = 1267
Score = 270 bits (690), Expect = 1e-71
Identities = 184/553 (33%), Positives = 293/553 (52%), Gaps = 66/553 (11%)
Query: 124 NTEDSLDQSKVGREKIARENHDSSPGALFVLPLYAMLPAAAQLRVFDGVKEGERLVVVAT 183
N ED D+ + G E++ E ++ L+VLPLY++LP Q+RVF +G RL +VAT
Sbjct: 703 NGEDEEDEEEEGFEEVLTEGQTAND-PLYVLPLYSLLPTKEQMRVFQKPPQGSRLCIVAT 761
Query: 184 NVAETSLTIPGIKYVVDTGREKVKNYDSSNGMETYEVKWISKASAAQRAGRAGRTAAGHC 243
NVAETSLTIPG++YVVD+GR K + Y+ SNG++++EV W+SKASA QR+GRAGRT GHC
Sbjct: 762 NVAETSLTIPGVRYVVDSGRSKERKYNESNGVQSFEVGWVSKASANQRSGRAGRTGPGHC 821
Query: 244 YRLYSSAAFSNEFPEFSPAEVEKVPVHGVVLLLKSMQIKKVANFPFPTSLKAASLLEAEN 303
YRLYSSA F ++F +FS E+ ++PV +VL +KSM I + NFPFPT +L +A
Sbjct: 822 YRLYSSAVFEHDFEQFSKPEILRMPVESIVLQMKSMAIHNIINFPFPTPPDRVALSKAIQ 881
Query: 304 CLRALEALDSKDELTLLGKAMALYPLSPRHSRMILTVIKNTRYKHIRNSSLLLAYAVAAA 363
L+ L ALD+K+ +T GK M+L+PLSPR S+M+L + + L Y VA
Sbjct: 882 LLQYLGALDNKEMITEDGKKMSLFPLSPRFSKMLL----------VSDEKACLPYIVAIV 931
Query: 364 AALSLPNPFVMQYE------GNDSNKDSETSEKSRMGDNENNIDKTEKTKRKKLKQTSKV 417
+ALS+ +PF+ ++E N D +K R +++ + + +K+L+
Sbjct: 932 SALSVGDPFINEFELGINEISRKPNPDENLDDKIR--EHDESTPGMDPELKKELRSKFYK 989
Query: 418 AREKFRIVS--SDA---LAIAYALQCFEHSQNSVQFCEDNALHFKTMDEMSKLRQQLLRL 472
+R +F + SD L++ A+ Q + F + N L K M+E+ KLR+QL+ +
Sbjct: 990 SRSQFSKLDKFSDVFRLLSVVSAMDYVPKEQKEI-FMKKNFLRGKLMEEIVKLRKQLMYI 1048
Query: 473 VFFQNDKGGLEQEYSWTHVTLEDVEHVWRVSSAHYPLP-LVEERLICRAICAGWADRVAK 531
+ K E++ V R +P +++ +L+ + ICAG+ D VA
Sbjct: 1049 IKSNTSK--------------ENIAVVIRNEDLKSDIPSVIQIKLLKQMICAGFVDHVAV 1094
Query: 532 RIPISKAVDGETISRAGRYQSCMV-----------DESIFIHRWS---SVSTVHPEFLVY 577
R + D + +R + D ++IH S ++ + P++++Y
Sbjct: 1095 RADVLFPDDAKITNRTSIINIPYIPVLATRTPNIEDCFVYIHPTSILNNLGEMPPKYMLY 1154
Query: 578 NELLETKRPNKEGETSAKRAYMHGVTNVDPTWLVENAKSSCI--FSPPLT-DPRPFYDAQ 634
L + G + M+ + ++ T L A+ + +S PLT +
Sbjct: 1155 YSL------HLGGNNKTR---MNTLCDIASTPLANIARKGLLLTYSKPLTGQGLKTVNLS 1205
Query: 635 ADQVKCWVIPTFG 647
+ C+V+P FG
Sbjct: 1206 PTERYCYVVPRFG 1218
>KZ_DROME (O46072) Probable ATP-dependent helicase kurz
Length = 1192
Score = 264 bits (675), Expect = 6e-70
Identities = 190/619 (30%), Positives = 297/619 (47%), Gaps = 66/619 (10%)
Query: 151 LFVLPLYAMLPAAAQLRVFDGVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKNYD 210
L+VLPLY++L + Q R+F V +G RL VV+TNVAETSLTIP IKYVVD GR+K + YD
Sbjct: 617 LWVLPLYSLLSSEKQNRIFLPVPDGCRLCVVSTNVAETSLTIPHIKYVVDCGRQKTRLYD 676
Query: 211 SSNGMETYEVKWISKASAAQRAGRAGRTAAGHCYRLYSSAAFSNEFPEFSPAEVEKVPVH 270
G+ + V + SKASA QRAGRAGR +AGHCYRLYSSA +++ F +FS +++K PV
Sbjct: 677 KLTGVSAFVVTYTSKASADQRAGRAGRISAGHCYRLYSSAVYNDCFEDFSQPDIQKKPVE 736
Query: 271 GVVLLLKSMQIKKVANFPFPTSLKAASLLEAENCLRALEAL--------DSKDELTLLGK 322
++L ++ M I +V +FPFP+ L AE L L AL D +T LG
Sbjct: 737 DLMLQMRCMGIDRVVHFPFPSPPDQVQLQAAERRLIVLGALEVAKTENTDLPPAVTRLGH 796
Query: 323 AMALYPLSPRHSRMILTVIKNTRYKHIRNSSLLLAYAVAAAAALSLPNPFVMQYEGNDSN 382
++ +P++PR +M+ H +N LL Y V AALS+ +
Sbjct: 797 VISRFPVAPRFGKML-------ALSHQQN---LLPYTVCLVAALSVQEVLI--------- 837
Query: 383 KDSETSEKSRMGDNENNIDKTEKTKRKKLKQTSKVAREKFRIVSSDALAIAYALQCFEHS 442
ET + + D R K+ S A ++++ D + + A+ E++
Sbjct: 838 ---ETGV-------QRDEDVAPGANRFHRKRQSWAASGNYQLL-GDPMVLLRAVGAAEYA 886
Query: 443 QNS---VQFCEDNALHFKTMDEMSKLRQQLLRLVFFQNDKGGLEQEYSWTHVTLEDVEHV 499
+ +FC N L K M E+ KLR QL + ++ + DVE
Sbjct: 887 GSQGRLPEFCAANGLRQKAMSEVRKLRVQLTNEI----------------NLNVSDVE-- 928
Query: 500 WRVSSAHYPLPLVEERLICRAICAGWADRVAKRIPISKAVDGETISRAGRYQSCM-VDES 558
V P + R + + + AG DRVA+++P++ D E R +C ++E
Sbjct: 929 LGVDPELKPPTDAQARFLRQILLAGMGDRVARKVPLADIADKEERRRLKYAYNCADMEEP 988
Query: 559 IFIHRWSSVSTVHPEFLVYNELLETKRPNKEGETSAKRAYMHGVTNVDPTWLVENAKSSC 618
F+H S + PE+++Y E E + + + + ++ G+T ++P WL+ C
Sbjct: 989 AFLHVSSVLRQKAPEWVIYQEAYELQNGD------STKMFIRGITAIEPEWLLLYVPLLC 1042
Query: 619 IFSPPLTDPRPFYDAQADQVKCWVIPTFGRFCWELPKHSIPISNVEHRVQVFAYALLEGQ 678
DP P +D + ++ C V TFG+ WELP + + E F LL+G+
Sbjct: 1043 NIREVREDPAPRFDKTSGKIFCHVDATFGKSGWELPLGEVEMPLSEKACCYFGMFLLDGE 1102
Query: 679 VCTCLKSVRKYMSAPPETILRREALGQKRVGNLISKLNSRLIDSSAMLRIVWKQNPRELF 738
VC+ L R + + P ++++ + +V L ++ I + L W +P L
Sbjct: 1103 VCSRLADFRSKLKSTPASVIKSWSSMNNKVLRFKRALITKQIHNRQALIDQWNSDPHFLL 1162
Query: 739 SEILDWFQQGFRKHFEELW 757
E + LW
Sbjct: 1163 EEYQNLLYDVALSELTPLW 1181
>YK16_SCHPO (Q9HDY4) Putative ATP-dependent RNA helicase PB1A10.06c
(EC 3.6.1.-)
Length = 1183
Score = 259 bits (662), Expect = 2e-68
Identities = 184/572 (32%), Positives = 295/572 (51%), Gaps = 73/572 (12%)
Query: 101 SLASLKAAFENLSGQATLSSSNVNTE-DSLDQSKVGREKIARENHDSSPGALFVLPLYAM 159
S LK+ + + T+S N + + ++ D +V + +D ++VLPLY++
Sbjct: 651 SFRPLKSRARIVVSRKTMSVENEDLQSETEDIDQVPTSSSSSVTYDDESEPMYVLPLYSL 710
Query: 160 LPAAAQLRVFDGVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKNYDSSNGMETYE 219
L Q++VFD EG R+ +VATNVAETS+TIP I+YVVD G+ K + Y+ ++ +E
Sbjct: 711 LTTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYVVDCGKAKERVYNEKTSVQKFE 770
Query: 220 VKWISKASAAQRAGRAGRTAAGHCYRLYSSAAFSNEFPEFSPAEVEKVPVHGVVLLLKSM 279
V+WISKA+A QRAGRAGRT GHCYRLYSSA F + FP S E+ + PV +VL +K+M
Sbjct: 771 VRWISKANADQRAGRAGRTGPGHCYRLYSSAVFDSSFPLHSLPEILRTPVESIVLQMKNM 830
Query: 280 QIKKVANFPFPTSLKAASLLEAENCLRALEALDSKDELTLLGKAMALYPLSPRHSRMILT 339
I +ANFPFPTS + L ++ L L A+DS+ LT LG+ M+L+PLSPR S+M++
Sbjct: 831 NIDNIANFPFPTSPGRSRLEKSLKLLSNLGAIDSEGVLTKLGEQMSLFPLSPRFSKMLI- 889
Query: 340 VIKNTRYKHIRNSSLLLAYAVAAAAALSLPNPFV----MQYEGNDSNKDSETSEKSRMGD 395
I L Y +A +ALS+ FV + Y+ +D N SE E + D
Sbjct: 890 ---------IGQQHGCLPYVIALVSALSINQLFVSKQSLLYDAHDKNSRSE--ETDLIDD 938
Query: 396 NENNIDKTEKTKRKKLKQTSKVAREKFRIVSSDALAIAYALQCFEHSQNSVQFCEDNALH 455
+E I + E+ K + + ++R + + AL++ A+ ++++ + +FC++N L
Sbjct: 939 DE--IKQKEEYKNRMRGYFNAISRFQAIDPDAPALSLLSAVCAYDYASDKRKFCKENYLR 996
Query: 456 FKTMDEMSKLRQQLLRLVFFQNDKGGLEQEYSWTHVTLEDVEHVWRVSSAHYPLPL---- 511
K ++E++ LR+Q++ GL + Y + RV + L L
Sbjct: 997 EKALEEVTNLRKQII----------GLLKRY------------MVRVEKEFFKLQLKPPT 1034
Query: 512 -VEERLICRAICAGWADRVAKRIPISKAVDGETISRAGRYQSCMVDESIFIHRWSSVSTV 570
V+ + + + I + + D+VA + T+ +G V + + +
Sbjct: 1035 SVQIKALRQFIASAYIDQVALYDKEKRGY--VTLFPSGSEVVQFVPDRTY--------NI 1084
Query: 571 HPEFLVYNELLETKRPNKEGETSAKRAYMHGVTNVDPTWLVENAKSSCI--FSPPLTDPR 628
E++VY L E++ + R YM +T + P L AK++ + +S PL+ P
Sbjct: 1085 DSEYVVYLSLHESR---------SGRVYMSPLTEISPEHLARLAKNTTLLSYSKPLSYPP 1135
Query: 629 PFYDAQADQVKCWVIPTF------GRFCWELP 654
Y A + +CWVIP G W LP
Sbjct: 1136 IRYLDNATKRECWVIPILSANIGTGSPSWNLP 1167
>PR16_SCHPO (Q9P774) Pre-mRNA splicing factor RNA helicase prp16 (EC
3.6.1.-)
Length = 1173
Score = 187 bits (474), Expect = 1e-46
Identities = 141/466 (30%), Positives = 220/466 (46%), Gaps = 100/466 (21%)
Query: 151 LFVLPLYAMLPAAAQLRVFDGVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKNYD 210
L +LP+Y+ +PA Q ++FD + G R VVVATN+AETSLT+ GI YVVDTG K+K Y+
Sbjct: 733 LSILPIYSQMPADLQAKIFDSAEPGVRKVVVATNIAETSLTVHGISYVVDTGYCKLKMYN 792
Query: 211 SSNGMETYEVKWISKASAAQRAGRAGRTAAGHCYRLYSSAAFSNEFPEFSPAEVEKVPVH 270
S G++T +V IS+A+A QRAGRAGRT G YRLY+ A+ E E + E+++ +
Sbjct: 793 SKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYRLYTEMAYIREMFETTLPEIQRTNLS 852
Query: 271 GVVLLLKSMQIKKVANFPF----PTSLKAASLLEAENCLRALEALDSKDELTLLGKAMAL 326
VL+LKS+ ++++++F F P ASL E L L ALD+ +LT LGK M+L
Sbjct: 853 NTVLILKSLGVEEISDFDFMDRPPNDTLMASLYE----LWTLGALDNFGKLTTLGKKMSL 908
Query: 327 YPLSPRHSRMILTVIKNTRYKHIRNSSLLLAYAVAAAAALSLPNPFVMQYEGNDSNKDSE 386
+P+ P S++I+ I + + LS+P+ F
Sbjct: 909 FPMDPSLSKLII----------IAEDYKCTEEIITIVSMLSVPSVFY------------- 945
Query: 387 TSEKSRMGDNENNIDKTEKTKRKKLKQTSKVAREKFRIVSSDALAIAYALQCFEHSQNSV 446
+ K+ + S AREKF + SD L + Q ++ + S
Sbjct: 946 --------------------RPKERAEESDAAREKFNVPESDHLMLLNIYQHWQRNGYSN 985
Query: 447 QFCEDNALHFKTMDEMSKLRQQLLRLVFFQNDKGGLEQEYSWTHVTLEDVEHVWRVSSAH 506
+C + LH KT+ +RQQL+ ++ K LE W
Sbjct: 986 SWCSKHFLHSKTLKRARDIRQQLVEIM--SKQKISLESVSDWD----------------- 1026
Query: 507 YPLPLVEERLICRAICAGWADRVAKRIPISKAVDGETISRAGRYQSCMVDESIFIHRWSS 566
++ R +C+ + + A +K + R+G V S++ +
Sbjct: 1027 ---------IVRRVLCSAYFHQAA----CAKGIGEYVHLRSGMPCHLHVTSSLYGLGYL- 1072
Query: 567 VSTVHPEFLVYNELLETKRPNKEGETSAKRAYMHGVTNVDPTWLVE 612
P++++Y+EL+ T + YM+ VT+VDP WL E
Sbjct: 1073 -----PDYVIYHELVLT-----------SKEYMNIVTSVDPYWLAE 1102
>DHX8_SCHPO (O42643) Putative pre-mRNA splicing factor ATP-dependent
RNA helicase C10F6.02c
Length = 1168
Score = 184 bits (467), Expect = 8e-46
Identities = 151/514 (29%), Positives = 237/514 (45%), Gaps = 118/514 (22%)
Query: 145 DSSPGALFVLPLYAMLPAAAQLRVFDGVKEGERLVVVATNVAETSLTIPGIKYVVDTGRE 204
DS P L +LP+Y+ LP+ Q R+F+ G R VV+ATN+AETSLTI GI YVVD G
Sbjct: 748 DSIP-ELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTIDGIYYVVDPGFV 806
Query: 205 KVKNYDSSNGMETYEVKWISKASAAQRAGRAGRTAAGHCYRLYSSAAFSNEFPEFSPAEV 264
K +D GM++ V IS+A A QR+GRAGRT G CYRLY+ +A+ NE E+
Sbjct: 807 KQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTESAYRNEMLPSPIPEI 866
Query: 265 EKVPVHGVVLLLKSMQIKKVANFPFPTSLKAASLLEAENCLRALEALDSKDELTLLGKAM 324
++ + +L+LK+M I + NF F A +++ A L AL ALD + LT LG+ M
Sbjct: 867 QRQNLSHTILMLKAMGINDLLNFDFMDPPPAQTMIAALQNLYALSALDDEGLLTPLGRKM 926
Query: 325 ALYPLSPRHSRMILTVIKNTRYKHIRNSSLLLAYAVAAAAALSLPNPFVMQYEGNDSNKD 384
A +P+ P+ S++++T ++ + + ++ A LS+PN +
Sbjct: 927 ADFPMEPQLSKVLITSVELGCSEEM----------LSIIAMLSVPNIW------------ 964
Query: 385 SETSEKSRMGDNENNIDKTEKTKRKKLKQTSKVAREKFRIVSSDALAIAYALQCFEHSQN 444
S EK + D + R +F SD L + ++ ++
Sbjct: 965 SRPREKQQEADRQ---------------------RAQFANPESDHLTLLNVYTTWKMNRC 1003
Query: 445 SVQFCEDNALHFKTMDEMSKLRQQLLRLVFFQNDKGGLEQEYSWTHVTLEDVEHVWRVSS 504
S +C ++ + + M +R+QL+RL+
Sbjct: 1004 SDNWCYEHYIQARGMRRAEDVRKQLIRLM------------------------------- 1032
Query: 505 AHYPLPLV----EERLICRAICAGWADRVAKRIPISKAVDGETISRAGRYQSCMVDESIF 560
Y P+V + LI RA+C+G+ VAKR S G Y++ + + ++
Sbjct: 1033 DRYRHPVVSCGRKRELILRALCSGYFTNVAKR-----------DSHEGCYKTIVENAPVY 1081
Query: 561 IHRWSSVSTVHPEFLVYNELLETKRPNKEGETSAKRAYMHGVTNVDPTWLVENAKSSCIF 620
+H + E+++Y+EL++T + YMH V+ V+P WLVE A
Sbjct: 1082 MHPSGVLFGKAAEWVIYHELIQT-----------SKEYMHTVSTVNPKWLVEVA------ 1124
Query: 621 SPPLTDPRPFYDAQADQV-----KCWVIPTFGRF 649
P F A A+QV V+P + RF
Sbjct: 1125 ------PTFFKFANANQVSKTKKNLKVLPLYNRF 1152
>MOG5_CAEEL (Q09530) Probable pre-mRNA splicing factor ATP-dependent
RNA helicase mog-5 (Sex determination protein mog-5)
(Masculinization of germ line protein 5)
Length = 1200
Score = 179 bits (454), Expect = 3e-44
Identities = 140/467 (29%), Positives = 211/467 (44%), Gaps = 95/467 (20%)
Query: 151 LFVLPLYAMLPAAAQLRVFDGVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKNYD 210
L +LP+Y LP+ Q R+FD G+R VV+ATN+AETSLTI GI YVVD G K K Y+
Sbjct: 782 LIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYN 841
Query: 211 SSNGMETYEVKWISKASAAQRAGRAGRTAAGHCYRLYSSAAFSNEFPEFSPAEVEKVPVH 270
+GM++ V IS+A+A QR+GRAGRT G CYRLY+ AF +E E+++ +
Sbjct: 842 PKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLA 901
Query: 271 GVVLLLKSMQIKKVANFPFPTSLKAASLLEAENCLRALEALDSKDELTLLGKAMALYPLS 330
+L LK+M I + +F F + S++ A N L L ALD LT LG+ MA +PL
Sbjct: 902 STLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALDGDGLLTKLGRRMAEFPLE 961
Query: 331 PRHSRMILTVIKNTRYKHIRNSSLLLAYAVAAAAALSLPNPFVMQYEGNDSNKDSETSEK 390
P S++++ + + + + A L++ N F E
Sbjct: 962 PSLSKLLIMSVDLGCSEEV----------LTIVAMLNVQNIFYRPKE------------- 998
Query: 391 SRMGDNENNIDKTEKTKRKKLKQTSKVAREKFRIVSSDALAIAYALQCFEHSQNSVQFCE 450
K + +KK KF D L + +++ S +C
Sbjct: 999 -----------KQDHADQKK---------AKFHQPEGDHLTLLAVYNSWKNHHFSQPWCF 1038
Query: 451 DNALHFKTMDEMSKLRQQLLRLVFFQNDKGGLEQEYSWTHVTL-EDVEHVWRVSSAHYPL 509
+N + ++M +R+QLL G+ + V+ DV V
Sbjct: 1039 ENFIQVRSMKRAQDIRKQLL----------GIMDRHKLLMVSCGRDVSRVQ--------- 1079
Query: 510 PLVEERLICRAICAGWADRVAKRIPISKAVDGETISRAGRYQSCMVDESIFIHRWSSVST 569
+AIC+G+ AKR P Y++ ++++IH S+
Sbjct: 1080 ---------KAICSGFFRNAAKRDP------------QEGYRTLTDGQNVYIHPSSACFQ 1118
Query: 570 VHPEFLVYNELLETKRPNKEGETSAKRAYMHGVTNVDPTWLVENAKS 616
PE++VY+EL+ T + YM VT +DP WLVE A S
Sbjct: 1119 QQPEWVVYHELVMT-----------TKEYMREVTAIDPKWLVEFAPS 1154
>DHX8_HUMAN (Q14562) ATP-dependent helicase DHX8 (RNA helicase HRH1)
(DEAH-box protein 8)
Length = 1220
Score = 176 bits (446), Expect = 2e-43
Identities = 138/473 (29%), Positives = 215/473 (45%), Gaps = 93/473 (19%)
Query: 151 LFVLPLYAMLPAAAQLRVFDGVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKNYD 210
L +LP+Y+ LP+ Q R+FD G R VV+ATN+AETSLTI GI YVVD G K K Y+
Sbjct: 807 LIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYN 866
Query: 211 SSNGMETYEVKWISKASAAQRAGRAGRTAAGHCYRLYSSAAFSNEFPEFSPAEVEKVPVH 270
S G++ V IS+A A QRAGRAGRT G CYRLY+ A+ +E + E+++ +
Sbjct: 867 SKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLA 926
Query: 271 GVVLLLKSMQIKKVANFPFPTSLKAASLLEAENCLRALEALDSKDELTLLGKAMALYPLS 330
VL LK+M I + +F F + +L+ A L L ALD + LT LG+ MA +PL
Sbjct: 927 STVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLE 986
Query: 331 PRHSRMILTVIKNTRYKHIRNSSLLLAYAVAAAAALSLPNPFVMQYEGNDSNKDSETSEK 390
P +M++ + H+ S +L + LS+ N F +K
Sbjct: 987 PMLCKMLIMSV------HLGCSEEML----TIVSMLSVQNVFY------------RPKDK 1024
Query: 391 SRMGDNENNIDKTEKTKRKKLKQTSKVAREKFRIVSSDALAIAYALQCFEHSQNSVQFCE 450
+ D + + KF D L + +++++ S +C
Sbjct: 1025 QALADQK---------------------KAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCY 1063
Query: 451 DNALHFKTMDEMSKLRQQLLRLVFFQNDKGGLEQEYSWTHVTLEDVEHVWRVSSAHYPLP 510
+N + +++ +R+Q+L ++ H V S
Sbjct: 1064 ENFIQARSLRRAQDIRKQMLGIM----------------------DRHKLDVVSCGKSTV 1101
Query: 511 LVEERLICRAICAGWADRVAKRIPISKAVDGETISRAGRYQSCMVDESIFIHRWSSVSTV 570
V+ +AIC+G+ AK+ P Y++ + + ++IH S++
Sbjct: 1102 RVQ-----KAICSGFFRNAAKKDP------------QEGYRTLIDQQVVYIHPSSALFNR 1144
Query: 571 HPEFLVYNELLETKRPNKEGETSAKRAYMHGVTNVDPTWLVENAKSSCIFSPP 623
PE++VY+EL+ T + YM VT +DP WLVE A + S P
Sbjct: 1145 QPEWVVYHELVLT-----------TKEYMREVTTIDPRWLVEFAPAFFKVSDP 1186
>DD16_PANTR (Q7YR39) Putative pre-mRNA splicing factor RNA helicase
(ATP-dependent RNA helicase #3) (DEAH-box protein 16)
Length = 1044
Score = 176 bits (446), Expect = 2e-43
Identities = 149/464 (32%), Positives = 212/464 (45%), Gaps = 93/464 (20%)
Query: 151 LFVLPLYAMLPAAAQLRVFDGVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKNYD 210
L VLP+YA LP+ Q R+F G R VVVATN+AETSLTI GI YV+D G K K+Y+
Sbjct: 645 LLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYN 704
Query: 211 SSNGMETYEVKWISKASAAQRAGRAGRTAAGHCYRLYSSAAFSNEFPEFSPAEVEKVPVH 270
GME+ V SKASA QRAGRAGR AAG C+RLY++ A+ +E E + E+++ +
Sbjct: 705 PRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLG 764
Query: 271 GVVLLLKSMQIKKVANFPFPTSLKAASLLEAENCLRALEALDSKDELTLLGKAMALYPLS 330
VVLLLKS+ I + +F F +LL A L AL AL+ ELT G+ MA P+
Sbjct: 765 NVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVD 824
Query: 331 PRHSRMILTVIKNTRYKHIRNSSLLLAYAVAAAAALSLPNPFVMQYEGNDSNKDSETSEK 390
P S+MIL K + + I + AA LS+ N + +K
Sbjct: 825 PMLSKMILASEKYSCSEEI----------LTVAAMLSVNNSIFYR-----------PKDK 863
Query: 391 SRMGDNENNIDKTEKTKRKKLKQTSKVAREKFRIVSSDALAIAYALQCFEHSQNSVQFCE 450
DN AR F + D L + + S S Q+C
Sbjct: 864 VVHADN---------------------ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCY 902
Query: 451 DNALHFKTMDEMSKLRQQLLRLVFFQNDKGGLEQEYSWTHVTLEDVEHVWRVSSAHYPLP 510
+N + F++M +R+QL L LE VE
Sbjct: 903 ENFVQFRSMRRARDVREQLEGL--------------------LERVE------------- 929
Query: 511 LVEERLICRAICAGWADRVAKRIPISKAVDGETISRAGRYQSCMVDESIFIHRWSSVSTV 570
+ + C G RV K I ++R+G Y++ +++FIH SS+
Sbjct: 930 ------VGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQ 982
Query: 571 HPEFLVYNELLETKRPNKEGETSAKRAYMHGVTNVDPTWLVENA 614
P +L+Y+EL+ T + +M V ++ +WL+E A
Sbjct: 983 QPRWLLYHELVLT-----------TKEFMRQVLEIESSWLLEVA 1015
>DD16_HUMAN (O60231) Putative pre-mRNA splicing factor RNA helicase
(ATP-dependent RNA helicase #3) (DEAH-box protein 16)
Length = 1041
Score = 176 bits (446), Expect = 2e-43
Identities = 149/464 (32%), Positives = 212/464 (45%), Gaps = 93/464 (20%)
Query: 151 LFVLPLYAMLPAAAQLRVFDGVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKNYD 210
L VLP+YA LP+ Q R+F G R VVVATN+AETSLTI GI YV+D G K K+Y+
Sbjct: 642 LLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYN 701
Query: 211 SSNGMETYEVKWISKASAAQRAGRAGRTAAGHCYRLYSSAAFSNEFPEFSPAEVEKVPVH 270
GME+ V SKASA QRAGRAGR AAG C+RLY++ A+ +E E + E+++ +
Sbjct: 702 PRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLG 761
Query: 271 GVVLLLKSMQIKKVANFPFPTSLKAASLLEAENCLRALEALDSKDELTLLGKAMALYPLS 330
VVLLLKS+ I + +F F +LL A L AL AL+ ELT G+ MA P+
Sbjct: 762 NVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVD 821
Query: 331 PRHSRMILTVIKNTRYKHIRNSSLLLAYAVAAAAALSLPNPFVMQYEGNDSNKDSETSEK 390
P S+MIL K + + I + AA LS+ N + +K
Sbjct: 822 PMLSKMILASEKYSCSEEI----------LTVAAMLSVNNSIFYR-----------PKDK 860
Query: 391 SRMGDNENNIDKTEKTKRKKLKQTSKVAREKFRIVSSDALAIAYALQCFEHSQNSVQFCE 450
DN AR F + D L + + S S Q+C
Sbjct: 861 VVHADN---------------------ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCY 899
Query: 451 DNALHFKTMDEMSKLRQQLLRLVFFQNDKGGLEQEYSWTHVTLEDVEHVWRVSSAHYPLP 510
+N + F++M +R+QL L LE VE
Sbjct: 900 ENFVQFRSMRRARDVREQLEGL--------------------LERVE------------- 926
Query: 511 LVEERLICRAICAGWADRVAKRIPISKAVDGETISRAGRYQSCMVDESIFIHRWSSVSTV 570
+ + C G RV K I ++R+G Y++ +++FIH SS+
Sbjct: 927 ------VGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQ 979
Query: 571 HPEFLVYNELLETKRPNKEGETSAKRAYMHGVTNVDPTWLVENA 614
P +L+Y+EL+ T + +M V ++ +WL+E A
Sbjct: 980 QPRWLLYHELVLT-----------TKEFMRQVLEIESSWLLEVA 1012
>PR22_YEAST (P24384) Pre-mRNA splicing factor RNA helicase PRP22
Length = 1145
Score = 170 bits (430), Expect = 2e-41
Identities = 140/468 (29%), Positives = 217/468 (45%), Gaps = 93/468 (19%)
Query: 147 SPGALFVLPLYAMLPAAAQLRVFDGVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKV 206
S G L +LP+Y+ LP+ Q ++F+ +G R VV ATN+AETS+TI GI YVVD G K+
Sbjct: 721 SIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNIAETSITIDGIYYVVDPGFAKI 780
Query: 207 KNYDSSNGMETYEVKWISKASAAQRAGRAGRTAAGHCYRLYSSAAFSNEFPEFSPAEVEK 266
Y++ G+E V IS+A A QR GRAGRT G CYRLY+ +AF NE E + E+++
Sbjct: 781 NIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEMLENTVPEIQR 840
Query: 267 VPVHGVVLLLKSMQIKKVANFPFPTSLKAASLLEAENCLRALEALDSKDELTLLGKAMAL 326
+ +L+LK+M I + F F +L A L L++LD + +LT LGK M+L
Sbjct: 841 QNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNALTELYHLQSLDDEGKLTNLGKEMSL 900
Query: 327 YPLSPRHSRMILTVIKNTRYKHIRNSSLLLAYAVAAAAALSLPNPFVMQYEGNDSNKDSE 386
+P+ P SR +L+ + N I V + LS+ N F
Sbjct: 901 FPMDPTLSRSLLSSVDNQCSDEI----------VTIISMLSVQNVFY------------- 937
Query: 387 TSEKSRMGDNENNIDKTEKTKRKKLKQTSKVAREKFRIVSSDALAIAYALQCFEHSQNSV 446
+ K ++L+ SK A KF D L + ++ + S
Sbjct: 938 ------------------RPKDRQLEADSKKA--KFHHPYGDHLTLLNVYTRWQQANYSE 977
Query: 447 QFCEDNALHFKTMDEMSKLRQQLLRLVFFQNDKGGLEQEYSWTHVTLEDVEHVWRVSSAH 506
Q+C+ N LHF+ + ++ Q + ++F K GL ++ S H
Sbjct: 978 QYCKTNFLHFRHLKRARDVKSQ-ISMIF---KKIGL------------------KLISCH 1015
Query: 507 YPLPLVEERLICRAICAGWADRVAKRIPISKAVDGETISRAGRYQSCMVDESIFIHRWSS 566
+ LI + +G+ AKR S+ G Y++ + IH SS
Sbjct: 1016 -----SDPDLIRKTFVSGFFMNAAKR-----------DSQVG-YKTINGGTEVGIHPSSS 1058
Query: 567 VSTVHPEFLVYNELLETKRPNKEGETSAKRAYMHGVTNVDPTWLVENA 614
+ E+++Y+ ++ T R YM VT+++P WL+E A
Sbjct: 1059 LYGKEYEYVMYHSIVLT-----------SREYMSQVTSIEPQWLLEVA 1095
>DHX8_ARATH (Q38953) Putative pre-mRNA splicing factor ATP-dependent
RNA helicase
Length = 1168
Score = 170 bits (430), Expect = 2e-41
Identities = 135/464 (29%), Positives = 213/464 (45%), Gaps = 93/464 (20%)
Query: 151 LFVLPLYAMLPAAAQLRVFDGVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKNYD 210
L +LP+Y+ LP+ Q R+FD G+R VVVATN+AE SLTI GI YVVD G K Y+
Sbjct: 757 LIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYN 816
Query: 211 SSNGMETYEVKWISKASAAQRAGRAGRTAAGHCYRLYSSAAFSNEFPEFSPAEVEKVPVH 270
G+E+ + IS+ASA QRAGRAGRT G CYRLY+ +A+ NE P S E++++ +
Sbjct: 817 PKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRINLG 876
Query: 271 GVVLLLKSMQIKKVANFPFPTSLKAASLLEAENCLRALEALDSKDELTLLGKAMALYPLS 330
L +K+M I + +F F + +L+ A L +L ALD + LT LG+ MA +PL
Sbjct: 877 MTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLE 936
Query: 331 PRHSRMILTVIKNTRYKHIRNSSLLLAYAVAAAAALSLPNPFVMQYEGNDSNKDSETSEK 390
P S+M+L + I + A + N F E K ++ +K
Sbjct: 937 PPLSKMLLASVDLGCSDEI----------LTMIAMIQTGNIFYRPRE-----KQAQADQK 981
Query: 391 SRMGDNENNIDKTEKTKRKKLKQTSKVAREKFRIVSSDALAIAYALQCFEHSQNSVQFCE 450
R KF D L + + ++ S +C
Sbjct: 982 ----------------------------RAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCF 1013
Query: 451 DNALHFKTMDEMSKLRQQLLRLVFFQNDKGGLEQEYSWTHVTLEDVEHVWRVSSAHYPLP 510
+N + +++ +R+QLL ++ DK L+ + + T
Sbjct: 1014 ENFIQSRSLRRAQDVRKQLLSIM----DKYKLDVVTAGKNFT------------------ 1051
Query: 511 LVEERLICRAICAGWADRVAKRIPISKAVDGETISRAGRYQSCMVDESIFIHRWSSVSTV 570
I +AI AG+ A++ P Y++ + ++ ++IH S++
Sbjct: 1052 -----KIRKAITAGFFFHGARKDP------------QEGYRTLVENQPVYIHPSSALFQR 1094
Query: 571 HPEFLVYNELLETKRPNKEGETSAKRAYMHGVTNVDPTWLVENA 614
P++++Y++L+ T + YM VT +DP WLVE A
Sbjct: 1095 QPDWVIYHDLVMT-----------TKEYMREVTVIDPKWLVELA 1127
>PR16_YEAST (P15938) Pre-mRNA splicing factor RNA helicase PRP16 (EC
3.6.1.-)
Length = 1071
Score = 161 bits (408), Expect = 5e-39
Identities = 126/463 (27%), Positives = 215/463 (46%), Gaps = 96/463 (20%)
Query: 153 VLPLYAMLPAAAQLRVFDGVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKNYDSS 212
+LP+Y+ LPA Q ++F + +R +++ATN+AETSLTI GI+YV+D G K+K Y+
Sbjct: 608 ILPIYSALPADLQFKIFQDLHGTKRKIIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPK 667
Query: 213 NGMETYEVKWISKASAAQRAGRAGRTAAGHCYRLYSSAAFSNEFPEFSPAEVEKVPVHGV 272
G+++ + ISKA+A QR+GRAGRTA G YRLY+ F + + E+++ +
Sbjct: 668 IGLDSLVITPISKANADQRSGRAGRTAPGTAYRLYTEDTFKEDMYLQTIPEIQRTNLSNT 727
Query: 273 VLLLKSMQI-KKVANFPFPTSLKAASLLEAENCLRALEALDSKDELTLLGKAMALYPLSP 331
+LLLKS+ + +++ FPF + L + L + A+D+ +LT LG MA +PL P
Sbjct: 728 LLLLKSLDVTDELSKFPFIDKPPLQTFLSSLYELWFIGAIDTSGQLTPLGLQMAKFPLQP 787
Query: 332 RHSRMILTVIKNTRYKHIRNSSLLLAYAVAAAAALSLPNPFVMQYEGNDSNKDSETSEKS 391
S+++L ++N + + + LS+P F Y + K+++
Sbjct: 788 SLSKILLIAVRNGCSDEM----------LTIVSMLSVPQVF---YRPKERQKEAD----- 829
Query: 392 RMGDNENNIDKTEKTKRKKLKQTSKVAREKFRIVSSDALAIAYALQCFEHSQNSVQFCED 451
+AR KF I SD L + + + + S +C
Sbjct: 830 -------------------------IARNKFFIAKSDHLTLLNVFEQWRANNFSSHWCNK 864
Query: 452 NALHFKTMDEMSKLRQQLLRLVFFQNDKGGLEQEYSWTHVTLEDVEHVWRVSSAHYPLPL 511
+ + +K++ +R QLL T+ + + +SS
Sbjct: 865 HFVQYKSLVRARDIRDQLL---------------------TILKSQKIPVISSGK----- 898
Query: 512 VEERLICRAICAGWADRVAKRIPISKAVDGETISRAGRYQSCMVDESIFIHRWSSVSTVH 571
+ +I + IC+G+A + AK I+ Y S+ +H S++ +
Sbjct: 899 -DWDIIKKCICSGFAHQAAK------------ITGLRNYVHLKTGVSVQLHPTSALHGLG 945
Query: 572 --PEFLVYNELLETKRPNKEGETSAKRAYMHGVTNVDPTWLVE 612
P ++VY+ELL T + Y+ VT+VDP WL+E
Sbjct: 946 DLPPYVVYHELLMT-----------SKEYICCVTSVDPFWLME 977
>PR16_HUMAN (Q92620) Pre-mRNA splicing factor ATP-dependent RNA
helicase PRP16 (EC 3.6.1.-) (ATP-dependent RNA helicase
DHX38) (DEAH-box protein 38)
Length = 1227
Score = 161 bits (408), Expect = 5e-39
Identities = 131/473 (27%), Positives = 217/473 (45%), Gaps = 96/473 (20%)
Query: 142 ENHDSSPGALFVLPLYAMLPAAAQLRVFDGVKEGERLVVVATNVAETSLTIPGIKYVVDT 201
E +++P AL VLP+Y+ LP+ Q ++F +G R +VATN+AETSLT+ GI +V+D+
Sbjct: 765 EELENAP-ALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDS 823
Query: 202 GREKVKNYDSSNGMETYEVKWISKASAAQRAGRAGRTAAGHCYRLYSSAAFSNEFPEFSP 261
G K+K ++ GM+ ++ IS+A+A QR+GRAGRT G C+RLY+ +A+ NE +
Sbjct: 824 GYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTV 883
Query: 262 AEVEKVPVHGVVLLLKSMQIKKVANFPFPTSLKAASLLEAENCLRALEALDSKDELTLLG 321
E+++ + VVLLLKS+ ++ + F F ++L + L L ALD+ LT G
Sbjct: 884 PEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTG 943
Query: 322 KAMALYPLSPRHSRMILTVIKNTRYKHIRNSSLLLAYAVAAAAALSLPNPFVMQYEGNDS 381
+ M +PL P S+M++ +S +LL ++ LS+P F
Sbjct: 944 RLMVEFPLDPALSKMLIVSCDMG-----CSSEILLIVSM-----LSVPAIFY-------- 985
Query: 382 NKDSETSEKSRMGDNENNIDKTEKTKRKKLKQTSKVAREKFRIVSSDALAIAYALQCFEH 441
+ K ++ S REKF + SD L +++
Sbjct: 986 -------------------------RPKGREEESDQIREKFAVPESDHLTYLNVYLQWKN 1020
Query: 442 SQNSVQFCEDNALHFKTMDEMSKLRQQLLRLVFFQNDKGGLEQEYSWTHVTLEDVEHVWR 501
+ S +C D+ +H K M ++ ++R QL ++ Q ++L W
Sbjct: 1021 NNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQ-------------RMSLASCGTDWD 1067
Query: 502 VSSAHYPLPLVEERLICRAICAGWADRVAKRIPISKAVDGETISRAGRYQSCMVDESIFI 561
+ + + ICA + + AK + G Y + +
Sbjct: 1068 I--------------VRKCICAAYFHQAAK------------LKGIGEYVNIRTGMPCHL 1101
Query: 562 HRWSSVSTV--HPEFLVYNELLETKRPNKEGETSAKRAYMHGVTNVDPTWLVE 612
H SS+ + P+++VY+EL+ T + YM VT VD WL E
Sbjct: 1102 HPTSSLFGMGYTPDYIVYHELVMT-----------TKEYMQCVTAVDGEWLAE 1143
>MOG1_CAEEL (P34498) Probable pre-mRNA splicing factor ATP-dependent
RNA helicase mog-1 (EC 3.6.1.-) (Sex determination
protein mog-1) (Masculinization of germ line protein 1)
Length = 1131
Score = 160 bits (405), Expect = 1e-38
Identities = 128/474 (27%), Positives = 214/474 (45%), Gaps = 104/474 (21%)
Query: 145 DSSPGALFVLPLYAMLPAAAQLRVFDGVKEGERLVVVATNVAETSLTIPGIKYVVDTGRE 204
D +P L VLP+Y+ LP+ Q ++F G R +VATN+AETSLT+ GI +V+D G
Sbjct: 678 DEAP-PLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTVDGILFVIDPGFC 736
Query: 205 KVKNYDSSNGMETYEVKWISKASAAQRAGRAGRTAAGHCYRLYSSAAFSNEFPEFSPAEV 264
K+K Y+ GM+ + +S+ASA QR GRAGRT G CYRLY+ F +E + + E+
Sbjct: 737 KMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKDELLKSTVPEI 796
Query: 265 EKVPVHGVVLLLKSMQIKKVANFPFPTSLKAASLLEAENCLRALEALDSKDELTLLGKAM 324
++ + VVLLLKS+ + + F F + ++L + L L ALD+ +LT +G+ M
Sbjct: 797 QRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWTLGALDNTGQLTPMGRKM 856
Query: 325 ALYPLSPRHSRMILTVIKNTRYKHIRNSSLLLAYAVAAAAALSLPNPFVMQYEGNDSNKD 384
+PL P S+M++ + + + + LS+P F + +G + D
Sbjct: 857 VEFPLDPTLSKMLIMSAEMGCSDEV----------LTIVSMLSVPAIF-FRPKGREEEAD 905
Query: 385 SETSEKSRMGDNENNIDKTEKTKRKKLKQTSKVAREKFRIVSSDALAIAYALQCFEHSQN 444
++ +EKF++ SD L + +
Sbjct: 906 AK--------------------------------KEKFQVPESDHLTFLNVYIQWRTHKY 933
Query: 445 SVQFCEDNALHFKTMDEMSKLRQQLLRLVFFQNDKGGLEQEYSWTHVTLEDVEHVWRVSS 504
S ++C DN LH K + ++ ++R QL + ++D++
Sbjct: 934 SAKWCADNYLHVKALKKVREVRAQLKEI--------------------MQDLK------- 966
Query: 505 AHYPLPLV----EERLICRAICAGWADRVAKRIPISKAVDGETISRAGRYQSCMVDESIF 560
LPL+ E ++ + IC+ + A+ + G Y + F
Sbjct: 967 ----LPLISNGSEWDIVRKCICSAYFHNAAR------------LKGIGEYVNVRTGIPCF 1010
Query: 561 IHRWSSVSTV--HPEFLVYNELLETKRPNKEGETSAKRAYMHGVTNVDPTWLVE 612
+H S++ + P+++VY+EL+ T + YM VT VD WL E
Sbjct: 1011 LHPTSALFGMGFMPDYVVYHELIMT-----------AKEYMQCVTAVDAIWLAE 1053
>CC28_SCHPO (Q10752) Putative ATP-dependent RNA helicase cdc28
Length = 1055
Score = 159 bits (403), Expect = 2e-38
Identities = 124/463 (26%), Positives = 210/463 (44%), Gaps = 92/463 (19%)
Query: 151 LFVLPLYAMLPAAAQLRVFDGVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKNYD 210
+ + P+YA LP+ Q ++FD G R VV+ATN+AETS+TI G+ +V+D+G K Y+
Sbjct: 661 IILCPIYANLPSELQAKIFDPTPPGARKVVLATNIAETSITIDGVNFVIDSGFVKQNMYN 720
Query: 211 SSNGMETYEVKWISKASAAQRAGRAGRTAAGHCYRLYSSAAFSNEFPEFSPAEVEKVPVH 270
GME+ S+ASA QRAGRAGR G C+RLY+ ++NE + E+++ +
Sbjct: 721 PRTGMESLVSVPCSRASADQRAGRAGRVGPGKCFRLYTRRTYNNELDMVTSPEIQRTNLT 780
Query: 271 GVVLLLKSMQIKKVANFPFPTSLKAASLLEAENCLRALEALDSKDELTLLGKAMALYPLS 330
+VLLLKS+ I + +F F + +L+ + L AL AL+++ ELT LG+ MA +P
Sbjct: 781 NIVLLLKSLGINNLLDFDFMDAPPPETLMRSLELLYALGALNNRGELTKLGRQMAEFPTD 840
Query: 331 PRHSRMILTVIKNTRYKHIRNSSLLLAYAVAAAAALSLPNPFVMQYEGNDSNKDSETSEK 390
P S+ ++I +++Y + +++ A++ P +M+
Sbjct: 841 PMLSK---SLIASSKYGCVEEVLSIVSMLGEASSLFYRPKDKIME--------------- 882
Query: 391 SRMGDNENNIDKTEKTKRKKLKQTSKVAREKFRIVSSDALAIAYALQCFEHSQNSVQFCE 450
DK AR F D L + + + + S +
Sbjct: 883 ---------ADK---------------ARANFTQPGGDHLTLLHIWNEWVDTDFSYNWAR 918
Query: 451 DNALHFKTMDEMSKLRQQLLRLVFFQNDKGGLEQEYSWTHVTLEDVEHVWRVSSAHYPLP 510
+N L +K++ +R QL L ++E V S + P
Sbjct: 919 ENFLQYKSLCRARDVRDQLANL------------------CERVEIELVTNSSESLDP-- 958
Query: 511 LVEERLICRAICAGWADRVAKRIPISKAVDGETISRAG-RYQSCMVDESIFIHRWSSVST 569
I +AI AG+ A+ + R+G Y++ +++++IH SSV+
Sbjct: 959 ------IKKAITAGYFSNAAR------------LDRSGDSYRTVKSNQTVYIHPSSSVAE 1000
Query: 570 VHPEFLVYNELLETKRPNKEGETSAKRAYMHGVTNVDPTWLVE 612
P+ ++Y EL+ T + Y +T + P WL+E
Sbjct: 1001 KKPKVIIYFELVLT-----------TKEYCRQITEIQPEWLLE 1032
>MOG4_CAEEL (O45244) Probable pre-mRNA splicing factor ATP-dependent
RNA helicase mog-4 (Sex determination protein mog-4)
(Masculinization of germ line protein 4)
Length = 1008
Score = 155 bits (391), Expect = 5e-37
Identities = 131/464 (28%), Positives = 207/464 (44%), Gaps = 93/464 (20%)
Query: 151 LFVLPLYAMLPAAAQLRVFDGVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKNYD 210
L LP+YA LP+ Q ++F+ + R VV+ATN+AETS+TI GI YV+D G K ++D
Sbjct: 608 LIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFD 667
Query: 211 SSNGMETYEVKWISKASAAQRAGRAGRTAAGHCYRLYSSAAFSNEFPEFSPAEVEKVPVH 270
+ +G+E V ISKA+A QRAGRAGRT G C+RLY++ A+ +E E E+++ +
Sbjct: 668 ARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLG 727
Query: 271 GVVLLLKSMQIKKVANFPFPTSLKAASLLEAENCLRALEALDSKDELTLLGKAMALYPLS 330
VVL+LKS+ I + +F F +L+ A L AL AL+ + ELT LG+ MA +P
Sbjct: 728 NVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYALGALNHRGELTKLGRRMAEFPCD 787
Query: 331 PRHSRMILTVIKNTRYKHIRNSSLLLAYAVAAAAALSLPNPFVMQYEGNDSNKDSETSEK 390
P S+MI I + +Y+ + A AA P V+ +
Sbjct: 788 PCMSKMI---IASEKYECSEEIVTIAAMLSCNAAVFYRPKAQVIHADS------------ 832
Query: 391 SRMGDNENNIDKTEKTKRKKLKQTSKVAREKFRIVSSDALAIAYALQCFEHSQNSVQFCE 450
AR+ F + D + + ++ S S ++C
Sbjct: 833 ---------------------------ARKGFWSPAGDHITLMNVYNKWQESSFSQRWCV 865
Query: 451 DNALHFKTMDEMSKLRQQLLRLVFFQNDKGGLEQEYSWTHVTLEDVEHVWRVSSAHYPLP 510
+N + +TM +R QL+ L LE VE + S+
Sbjct: 866 ENYVQHRTMKRARDVRDQLVGL--------------------LERVEIETKSST------ 899
Query: 511 LVEERLICRAICAGWADRVAKRIPISKAVDGETISRAGRYQSCMVDESIFIHRWSSVSTV 570
+ I +AI AG+ V+K + G Y++ + H S +
Sbjct: 900 --DTIKIRKAITAGYFYNVSK------------LDNTGHYKTVKHKHTTHPHPNSCLFEE 945
Query: 571 HPEFLVYNELLETKRPNKEGETSAKRAYMHGVTNVDPTWLVENA 614
P ++VY EL+ T + +M ++ ++ WL+E A
Sbjct: 946 TPRWVVYFELVFT-----------SKEFMREMSEIESGWLLEVA 978
>DD35_CAEEL (Q9BKQ8) Probable ATP-dependent helicase DHX35 homolog
Length = 732
Score = 153 bits (386), Expect = 2e-36
Identities = 100/324 (30%), Positives = 160/324 (48%), Gaps = 45/324 (13%)
Query: 151 LFVLPLYAMLPAAAQLRVFDGVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKNYD 210
L+V+P Y LPA Q++ FD G R VVVATN+AE S+TIPGI YV+DTG K++
Sbjct: 329 LWVVPCYGALPAREQMKAFDSTPHGTRKVVVATNIAEASITIPGICYVIDTGYVKLRAQH 388
Query: 211 SSNGMETYEVKWISKASAAQRAGRAGRTAAGHCYRLYSSAAFSNEFPEFSPAEVEKVPVH 270
++NG+ET +SKASA QRAGRAGR G CYRLY + F F E + E+++ +
Sbjct: 389 AANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYRLYPESEF-ERFAEGTVPEIQRCQMA 447
Query: 271 GVVLLLKSMQIKKVANFPFPTSLKAASLLEAENCLRALEALDSKDELTL-LGKAMALYPL 329
+L LK++ ++ V F + + + +++ L AL A+D +LT LG MA +PL
Sbjct: 448 STILQLKALGVQNVHRFHYLSPPPSWAMINGLELLYALGAIDETSQLTSPLGLQMAEFPL 507
Query: 330 SPRHSRMILTVIKNTRYKHIRNSSLLLAYAVAAAAALSLPNPFVMQYEGNDSNKDSETSE 389
P HS+ +L K+ + V A + + + F+ Y
Sbjct: 508 PPMHSKCLL---KSAEFG-------CSTEMVTIVAMMQIQDVFITPY------------- 544
Query: 390 KSRMGDNENNIDKTEKTKRKKLKQTSKVAREKFRIVSSDALAIAYALQCFEHSQNSVQFC 449
+ + + V R+KF + D + + F + S ++C
Sbjct: 545 --------------------RQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRSKKWC 584
Query: 450 EDNALHFKTMDEMSKLRQQLLRLV 473
D+ ++++ + +R QL+RL+
Sbjct: 585 SDHFVNYRGLMRADNVRSQLVRLL 608
>DHX9_HUMAN (Q08211) ATP-dependent RNA helicase A (Nuclear DNA
helicase II) (NDH II) (DEAH-box protein 9)
Length = 1270
Score = 140 bits (352), Expect = 2e-32
Identities = 83/226 (36%), Positives = 126/226 (55%), Gaps = 19/226 (8%)
Query: 153 VLPLYAMLPAAAQLRVFDGVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKNYDSS 212
+LPL++ +P Q +VFD V G V+++TN+AETS+TI + YV+D+ ++KVK + +
Sbjct: 683 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 742
Query: 213 NGMETYEVKWISKASAAQRAGRAGRTAAGHCYRLYSSAAFSNEFPEFSPAEVEKVPVHGV 272
N M Y W SK + QR GRAGR+ AG C+ L S A F +P E+ + P+H +
Sbjct: 743 NNMTNYSTVWASKTNLEQRKGRAGRSTAGFCFHLCSRARFERLETHMTP-EMFRTPLHEI 801
Query: 273 VLLLKSMQIKKVANFPF----PTSLKAASLLEAENCLRALEALDSKDELTLLGKAMALYP 328
L +K +++ + F P L A ++EAE+ LR L+ALD+ DELT LG+ +A P
Sbjct: 802 ALSIKLLRLGGIGQFLAKAIEPPPLDA--VIEAEHTLRELDALDANDELTPLGRILAKLP 859
Query: 329 LSPRHSRMILTVIKNTRYKHIRNSSLLLAYAVAA-AAALSLPNPFV 373
+ PR +M+ I + A+ AAA P PF+
Sbjct: 860 IEPRFGKMM-----------IMGCIFYVGDAICTIAAATCFPEPFI 894
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.315 0.130 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,564,247
Number of Sequences: 164201
Number of extensions: 3761687
Number of successful extensions: 17458
Number of sequences better than 10.0: 291
Number of HSP's better than 10.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 188
Number of HSP's that attempted gapping in prelim test: 14916
Number of HSP's gapped (non-prelim): 1163
length of query: 789
length of database: 59,974,054
effective HSP length: 118
effective length of query: 671
effective length of database: 40,598,336
effective search space: 27241483456
effective search space used: 27241483456
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 70 (31.6 bits)
Medicago: description of AC147012.5