Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC147012.14 + phase: 0 
         (147 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

MURE_CAUCR (Q9A595) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-...    32  0.64
ALF1_LAMJA (P53445) Fructose-bisphosphate aldolase, muscle type ...    31  1.1
XYL1_ASPNG (Q9P8R5) NAD(P)H-dependent D-xylose reductase (EC 1.1...    30  1.9
SPY4_HUMAN (Q9C004) Sprouty homolog 4 (Spry-4)                         30  2.4
EMC_DROME (P18491) Extra-macrochaetae protein                          30  2.4
VE1_HPV29 (P50764) Replication protein E1                              29  3.2
VE1_HPV10 (P36720) Replication protein E1                              29  3.2
YTQJ_CAEEL (Q19673) Hypothetical tyrosinase-like protein F21C3.2...    29  4.2
SYFB_XANAC (Q8PJE5) Phenylalanyl-tRNA synthetase beta chain (EC ...    29  4.2
S122_HUMAN (P55011) Solute carrier family 12 member 2 (Bumetanid...    29  4.2
NMBL_MOUSE (O08919) Numb-like protein                                  29  4.2
CN3A_RAT (Q62865) cGMP-inhibited 3',5'-cyclic phosphodiesterase ...    29  4.2
VE1_HPV54 (Q81020) Replication protein E1                              28  5.4
SPY4_MOUSE (Q9WTP2) Sprouty homolog 4 (Spry-4)                         28  5.4
GATA_STAEP (Q8CRU3) Glutamyl-tRNA(Gln) amidotransferase subunit ...    28  5.4
SOR3_HUMAN (Q9UPU3) VPS10 domain-containing receptor SorCS3 prec...    28  7.1
NUOG_MYCTU (P95175) NADH-quinone oxidoreductase chain G (EC 1.6....    28  7.1
NUOG_MYCBO (P59962) NADH-quinone oxidoreductase chain G (EC 1.6....    28  7.1
ITN2_MOUSE (Q9Z0R6) Intersectin 2 (SH3 domain-containing protein...    28  7.1
GATA_STAAW (Q8NVT3) Glutamyl-tRNA(Gln) amidotransferase subunit ...    28  9.3

>MURE_CAUCR (Q9A595)
           UDP-N-acetylmuramoylalanyl-D-glutamate--2,
           6-diaminopimelate ligase (EC 6.3.2.13)
           (UDP-N-acetylmuramyl-tripeptide synthetase)
           (Meso-diaminopimelate-adding enzyme)
           (UDP-MurNAc-tripeptide synthetase)
          Length = 486

 Score = 31.6 bits (70), Expect = 0.64
 Identities = 18/49 (36%), Positives = 25/49 (50%), Gaps = 1/49 (2%)

Query: 27  PAGTAPDAGD-AVMARWLQSAGLQHLASPLANTAIDQRLLPNLLMQGYG 74
           P  T PDAGD A M   L   G+ HLA   ++  +DQR +  + +   G
Sbjct: 149 PGLTTPDAGDVAEMIARLADMGVTHLALEASSHGVDQRRIDGVKLSAAG 197


>ALF1_LAMJA (P53445) Fructose-bisphosphate aldolase, muscle type (EC
           4.1.2.13)
          Length = 363

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 3/70 (4%)

Query: 50  HLASPLANTAIDQRLLPNLLMQGYGAQSAEEKQRLFKLMRSLNFNGESGSELYTPTSQTL 109
           HL  P A T    R L   +++ +G +    K    +LMR    NG++    Y PT    
Sbjct: 291 HLIKPWALTFSYGRALQASVLKAWGGKKENLKAAQDELMRRAKINGQASKGEYKPTGT-- 348

Query: 110 GGAAVSDGFY 119
            GAA  +  +
Sbjct: 349 -GAAAGESLF 357


>XYL1_ASPNG (Q9P8R5) NAD(P)H-dependent D-xylose reductase (EC
           1.1.1.-) (XR)
          Length = 319

 Score = 30.0 bits (66), Expect = 1.9
 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 5/67 (7%)

Query: 38  VMARWLQSAGLQHLASPLANTAIDQRLLPNLLMQGYGAQSAEEKQRLFKLMRSLNFNGES 97
           V+ RW    G+  +  P +N    QRL  NL + G+  +  EE + +  L R L FN   
Sbjct: 256 VLLRWATQRGIAVI--PKSNNP--QRLKQNLDVTGWNLEE-EEIKAISGLDRGLRFNDPL 310

Query: 98  GSELYTP 104
           G  LY P
Sbjct: 311 GYGLYAP 317


>SPY4_HUMAN (Q9C004) Sprouty homolog 4 (Spry-4)
          Length = 299

 Score = 29.6 bits (65), Expect = 2.4
 Identities = 20/67 (29%), Positives = 30/67 (43%), Gaps = 4/67 (5%)

Query: 18  GGAVPLHPAPAGTAPDAGDAVMARWLQSAGLQHLASPLANTAIDQRLLPNLLMQGYGAQS 77
           GGA  L P PA    D    V   W+  +G     S  ++T+ DQRLL ++       Q+
Sbjct: 69  GGAPELAPTPARCDQD----VTHHWISFSGRPSSVSSSSSTSSDQRLLDHMAPPPVADQA 124

Query: 78  AEEKQRL 84
           +    R+
Sbjct: 125 SPRAVRI 131


>EMC_DROME (P18491) Extra-macrochaetae protein
          Length = 199

 Score = 29.6 bits (65), Expect = 2.4
 Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 1/105 (0%)

Query: 1   MGGQSNAAAAAALYD-HAGGAVPLHPAPAGTAPDAGDAVMARWLQSAGLQHLASPLANTA 59
           MG    AAA  A+   H      +  A A    +    ++A+ L +     ++SP A   
Sbjct: 85  MGNFDAAAALTAVNGLHEDEDSDMEDADAEAEAEVDPDILAQRLNAEQPAKVSSPAARLP 144

Query: 60  IDQRLLPNLLMQGYGAQSAEEKQRLFKLMRSLNFNGESGSELYTP 104
           +  R  PN L+     Q  +++Q+L    + L    +  + L TP
Sbjct: 145 LTDRQTPNTLVAPAHPQQHQQQQQLQLQQQQLQSQQQLSNSLATP 189


>VE1_HPV29 (P50764) Replication protein E1
          Length = 660

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 24/73 (32%), Positives = 36/73 (48%), Gaps = 8/73 (10%)

Query: 53  SPLANTAIDQRLLPNLLMQGYGAQSAEEKQRLFKLMRSLNFNGESGSELYTPTSQTLGGA 112
           SP+   +I+  L P L     G QS++ K+RLF+L  S    G   +++ T T    G +
Sbjct: 97  SPVCVPSIEHELSPRLDAIKLGRQSSKAKRRLFQLPDS----GYGQTQVDTDT----GPS 148

Query: 113 AVSDGFYSPDFRG 125
            V DG  + D  G
Sbjct: 149 QVQDGCETGDQNG 161


>VE1_HPV10 (P36720) Replication protein E1
          Length = 681

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 4/91 (4%)

Query: 30  TAPDAGDAVMARWLQSAGLQHLASPLANTAIDQRLLPNLLMQGYGAQSAEEKQRLFKLMR 89
           TA D   AV     + A   + +      +I+  L P L     G QSA+ K+RLF+L  
Sbjct: 76  TAADDDVAVQTVKRKFAPSPYFSPVCEQASIEHELSPRLDAIKLGRQSAKAKRRLFELPD 135

Query: 90  S----LNFNGESGSELYTPTSQTLGGAAVSD 116
           S       + ESG +    +S+T  G    D
Sbjct: 136 SGYGQTQVDTESGPKQVQGSSETQDGRQDDD 166


>YTQJ_CAEEL (Q19673) Hypothetical tyrosinase-like protein F21C3.2 in
           chromosome I
          Length = 813

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 19/65 (29%), Positives = 29/65 (44%)

Query: 57  NTAIDQRLLPNLLMQGYGAQSAEEKQRLFKLMRSLNFNGESGSELYTPTSQTLGGAAVSD 116
           N  +  R L  ++ + Y   S +E+QRL +  R+L  NGE           +  GAA S 
Sbjct: 225 NCVVQGRPLGKVVRKEYRMLSDDERQRLHQAFRTLKQNGEYDRLARVHAQYSESGAAHSG 284

Query: 117 GFYSP 121
             + P
Sbjct: 285 PAFLP 289


>SYFB_XANAC (Q8PJE5) Phenylalanyl-tRNA synthetase beta chain (EC
           6.1.1.20) (Phenylalanine--tRNA ligase beta chain)
           (PheRS)
          Length = 792

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 3/66 (4%)

Query: 37  AVMARWLQSAGLQHLASPL-ANTAIDQ-RLLPNLLMQ-GYGAQSAEEKQRLFKLMRSLNF 93
           A++ RW  + GL  LA+PL A  AI + RLLP L+   G  A     + RLF+L +    
Sbjct: 518 ALLERWQLTEGLVPLANPLSAELAIMRPRLLPGLVATLGRNAARQAGRVRLFELGKVFAA 577

Query: 94  NGESGS 99
             ++G+
Sbjct: 578 AADTGA 583


>S122_HUMAN (P55011) Solute carrier family 12 member 2
          (Bumetanide-sensitive sodium-(potassium)-chloride
          cotransporter 1) (Basolateral Na-K-Cl symporter)
          Length = 1212

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 1/74 (1%)

Query: 5  SNAAAAAALYDHAGGAVPLHPAPAGTAPDAGDAVMARWLQSAGLQHLASPLANTAIDQRL 64
          S AA AAA  +  G AVP  P  A  A   G  V      +AG   L  PL  T    R 
Sbjct: 23 SAAALAAARVELPGTAVPSVPEDAAPASRDGGGVRDEGPAAAG-DGLGRPLGPTPSQSRF 81

Query: 65 LPNLLMQGYGAQSA 78
            +L+ +  G  +A
Sbjct: 82 QVDLVSENAGRAAA 95


>NMBL_MOUSE (O08919) Numb-like protein
          Length = 604

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 32/97 (32%), Positives = 42/97 (42%), Gaps = 11/97 (11%)

Query: 2   GGQSNAAAAAALYDHAGGAVPLH--PAPAGTAPDAGDAVMARWLQSAGLQHLASPLANTA 59
           G +  A AAAA     G A P H  P PA T+P  G+   A    +AG    A P  +  
Sbjct: 239 GDKKKAEAAAAPAVAPGPAQPGHVSPTPATTSP--GEKGEAGTPVAAGTTAAAIPRRHAP 296

Query: 60  IDQRLLPNLLMQG--YGAQSAEEKQRLFKLMRSLNFN 94
           ++Q     L+ QG   G  +  +K   FK   SL  N
Sbjct: 297 LEQ-----LVRQGSFRGFPALSQKNSPFKRQLSLRLN 328


>CN3A_RAT (Q62865) cGMP-inhibited 3',5'-cyclic phosphodiesterase A
           (EC 3.1.4.17) (Cyclic GMP inhibited phosphodiesterase A)
           (CGI-PDE A)
          Length = 1141

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 17/45 (37%), Positives = 23/45 (50%), Gaps = 1/45 (2%)

Query: 4   QSNAAAAAALYDHAGGAVPLHPAPAGTAPDAGDAVMARWLQSAGL 48
           +S+  AAA   +  G    + P P G AP  G A ++ WLQ A L
Sbjct: 89  ESSQEAAAEEEEEEGARGGVFPGPRGGAP-GGGAQLSPWLQPAAL 132


>VE1_HPV54 (Q81020) Replication protein E1
          Length = 633

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 22/77 (28%), Positives = 35/77 (44%), Gaps = 13/77 (16%)

Query: 53  SPLANT--AIDQRLLPNLLMQGYGAQSAEEKQRLF-----------KLMRSLNFNGESGS 99
           SP+AN+   +++ L P L     G +SA+ K+RLF            +  ++  N E   
Sbjct: 94  SPVANSEPCVEKDLSPRLGAISLGRRSAKAKRRLFDKAQPPPNGHTDVEAAVEVNTEGTD 153

Query: 100 ELYTPTSQTLGGAAVSD 116
           E  T   QT+ G   +D
Sbjct: 154 ETETDQVQTVSGETTTD 170


>SPY4_MOUSE (Q9WTP2) Sprouty homolog 4 (Spry-4)
          Length = 300

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 19/67 (28%), Positives = 29/67 (42%), Gaps = 4/67 (5%)

Query: 18  GGAVPLHPAPAGTAPDAGDAVMARWLQSAGLQHLASPLANTAIDQRLLPNLLMQGYGAQS 77
           GG   L P PA    D    +   W+  +G     S  ++T+ DQRLL ++       Q+
Sbjct: 70  GGPPELAPTPARCDQD----ITHHWISFSGRPSSVSSSSSTSSDQRLLDHMAPPPVAEQA 125

Query: 78  AEEKQRL 84
           +    RL
Sbjct: 126 SPRAVRL 132


>GATA_STAEP (Q8CRU3) Glutamyl-tRNA(Gln) amidotransferase subunit A
           (EC 6.3.5.-) (Glu-ADT subunit A)
          Length = 485

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 6/53 (11%)

Query: 72  GYGAQSAEEKQRLFKLMRSLNFNGESGSELYTPTSQTLGGAAVSDGFYSPDFR 124
           GY ++ A+  + L+K+ RS  F  E    ++      LG  A+S G+Y   ++
Sbjct: 330 GYHSKEAQSLEELYKMSRSEGFGEEVKRRIF------LGTFALSSGYYDAYYK 376


>SOR3_HUMAN (Q9UPU3) VPS10 domain-containing receptor SorCS3
           precursor
          Length = 1222

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 2/72 (2%)

Query: 8   AAAAALYDHAGGAVPLHPAPAGTAPDAGDAVMARWLQSAGLQHLASPLANTAIDQRLLPN 67
           A A   +D  GG  P  PA   + P A   +  R + S   + LAS      + +R  P 
Sbjct: 31  AGAEITWDATGG--PGRPAAPASRPPALSPLSPRAVASQWPEELASARRAAVLGRRAGPE 88

Query: 68  LLMQGYGAQSAE 79
           LL Q  G +  E
Sbjct: 89  LLPQQGGGRGGE 100


>NUOG_MYCTU (P95175) NADH-quinone oxidoreductase chain G (EC
           1.6.99.5) (NADH dehydrogenase I, chain G) (NDH-1, chain
           G)
          Length = 806

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 3/54 (5%)

Query: 9   AAAALYDHAGGAVPLHPAPAGTAPDAGDAVMARW---LQSAGLQHLASPLANTA 59
           AA  ++D    A P   A   T P+AG+A++  W   L    LQ     LA TA
Sbjct: 678 AALGIWDGKHAAGPHIAATGPTQPEAGEAILTGWRMLLDEGRLQDGEPYLAGTA 731


>NUOG_MYCBO (P59962) NADH-quinone oxidoreductase chain G (EC
           1.6.99.5) (NADH dehydrogenase I, chain G) (NDH-1, chain
           G)
          Length = 806

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 3/54 (5%)

Query: 9   AAAALYDHAGGAVPLHPAPAGTAPDAGDAVMARW---LQSAGLQHLASPLANTA 59
           AA  ++D    A P   A   T P+AG+A++  W   L    LQ     LA TA
Sbjct: 678 AALGIWDGKHAAGPHIAATGPTQPEAGEAILTGWRMLLDEGRLQDGEPYLAGTA 731


>ITN2_MOUSE (Q9Z0R6) Intersectin 2 (SH3 domain-containing protein
           1B) (EH and SH3 domains protein 2) (EH domain and SH3
           domain regulator of endocytosis 2)
          Length = 1658

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 4/94 (4%)

Query: 17  AGGAVPLHPAPAGTAPDAGDAVMARWLQSAGLQHLASPLANTAIDQRLLPNLLMQGYGAQ 76
           +G ++P    PA   P    + +     S  +Q L+ P +++ +      +L+M G+G  
Sbjct: 145 SGTSIPPLMMPAPLVPSVSTSSLPNGTASL-IQPLSIPYSSSTLPHASSYSLMMGGFGGA 203

Query: 77  SAEEKQRLFKLMRSLNFNGE---SGSELYTPTSQ 107
           S ++ Q L  L  S + +     SG+   T TS+
Sbjct: 204 SIQKAQSLIDLGSSSSTSSTASLSGNSPKTGTSE 237


>GATA_STAAW (Q8NVT3) Glutamyl-tRNA(Gln) amidotransferase subunit A
           (EC 6.3.5.-) (Glu-ADT subunit A)
          Length = 485

 Score = 27.7 bits (60), Expect = 9.3
 Identities = 15/53 (28%), Positives = 26/53 (48%), Gaps = 6/53 (11%)

Query: 72  GYGAQSAEEKQRLFKLMRSLNFNGESGSELYTPTSQTLGGAAVSDGFYSPDFR 124
           GY ++ A   + L+K+ RS  F  E    ++      LG  A+S G+Y   ++
Sbjct: 330 GYHSKEAHSLEELYKMSRSEGFGKEVKRRIF------LGTFALSSGYYDAYYK 376


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.315    0.133    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,885,863
Number of Sequences: 164201
Number of extensions: 757376
Number of successful extensions: 1689
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 1683
Number of HSP's gapped (non-prelim): 26
length of query: 147
length of database: 59,974,054
effective HSP length: 100
effective length of query: 47
effective length of database: 43,553,954
effective search space: 2047035838
effective search space used: 2047035838
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)


Medicago: description of AC147012.14