BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147010.6 + phase: 0
(663 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TO34_PEA (Q41009) Translocase of chloroplast 34 (34 kDa chloropl... 135 4e-31
TO34_ARATH (Q38906) Translocase of chloroplast 34 (34 kDa chloro... 132 2e-30
GIM5_HUMAN (Q96F15) GTPase, IMAP family member 5 (Immunity-assoc... 47 2e-04
GIM2_HUMAN (Q9UG22) GTPase, IMAP family member 2 (Immunity-assoc... 45 5e-04
GIM4_MOUSE (Q99JY3) GTPase, IMAP family member 4 (Immunity-assoc... 44 0.001
IAN4_MOUSE (Q99MI6) Immunity-associated nucleotide 4 protein 44 0.002
IAN4_RAT (Q8K3L6) Immunity-associated nucleotide 4 protein 43 0.002
GIM5_MOUSE (Q8BWF2) GTPase, IMAP family member 5 (Immunity-assoc... 43 0.003
CC10_CANAL (P39827) Cell division control protein 10 43 0.003
GIM7_HUMAN (Q8NHV1) GTPase, IMAP family member 7 (Immunity-assoc... 42 0.007
SEP3_MOUSE (Q9Z1S5) Neuronal-specific septin 3 41 0.009
SEP3_HUMAN (Q9UH03) Neuronal-specific septin 3 41 0.009
VSX1_BRARE (O42250) Visual system homeobox 1 (Transcription fact... 40 0.020
GIM4_HUMAN (Q9NUV9) GTPase, IMAP family member 4 (Immunity-assoc... 40 0.026
ENGA_SYNY3 (P74120) GTP-binding protein engA 40 0.026
SEP2_HUMAN (Q15019) Septin 2 (NEDD5 protein homolog) 39 0.044
SEP2_MOUSE (P42208) Septin 2 (NEDD5 protein) 39 0.057
YAP3_YEAST (P38749) AP-1 like transcription factor YAP3 38 0.097
GIM4_RAT (Q8K3K9) GTPase, IMAP family member 4 (Immunity-associa... 38 0.097
FKB4_SPOFR (Q26486) 46 kDa FK506-binding nuclear protein (EC 5.2... 38 0.097
>TO34_PEA (Q41009) Translocase of chloroplast 34 (34 kDa chloroplast
outer envelope protein) (GTP-binding protein OEP34)
(GTP-binding protein IAP34)
Length = 310
Score = 135 bits (339), Expect = 4e-31
Identities = 97/275 (35%), Positives = 137/275 (49%), Gaps = 25/275 (9%)
Query: 1 MAEQLESAGQEPLDFSCTIMVLGKSGVGKSSTINSIFDEVKFNTDAFHMGTKKVQDVVGM 60
+ E L + QE ++ S TI+V+GK GVGKSST+NSI E + F + V
Sbjct: 25 LLELLGNLKQEDVN-SLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRS 83
Query: 61 VQGIKVRVIDTPGLLPSWSDQPHNEKILHSVKRFIKKTPPDIVLYLDRLDMQSRDFSDMP 120
G + +IDTPGL+ N+ L+ +K F+ D++LY+DRLD D D
Sbjct: 84 RAGFTLNIIDTPGLIEGGYI---NDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKL 140
Query: 121 LLRTITDIFGPPIWFNAIVVLTHAASAPPDGPNGTPSSYDMFVTQRSHVVQQAIRQAAG- 179
+ + ITD FG IW AIV LTHA +PPDG YD F ++RS + Q +R A
Sbjct: 141 VAKAITDSFGKGIWNKAIVALTHAQFSPPDG-----LPYDEFFSKRSEALLQVVRSGASL 195
Query: 180 --DMRLMN-PVSLVENHSACRTNTAGQRVLPNGQVWKPQL------LLLSFASKILAEAN 230
D + + PV L+EN C N + ++VLPNG W P L + L+ + I + N
Sbjct: 196 KKDAQASDIPVVLIENSGRCNKNDSDEKVLPNGIAWIPHLVQTITEVALNKSESIFVDKN 255
Query: 231 ALLKLQDNPREKPYTARARAPPLPFLLSSLLQSRP 265
+ N R K + PL F L L ++P
Sbjct: 256 LIDGPNPNQRGKLWI------PLIFALQYLFLAKP 284
>TO34_ARATH (Q38906) Translocase of chloroplast 34 (34 kDa
chloroplast outer envelope protein) (GTP-binding protein
OEP34) (AtToc34)
Length = 313
Score = 132 bits (333), Expect = 2e-30
Identities = 95/285 (33%), Positives = 142/285 (49%), Gaps = 24/285 (8%)
Query: 16 SCTIMVLGKSGVGKSSTINSIFDEVKFNTDAFHMGTKKVQDVVGMVQGIKVRVIDTPGLL 75
S T++V+GK GVGKSST+NS+ E F + V G + +IDTPGL+
Sbjct: 38 SLTVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGLRPTLVSRTRSGFTLNIIDTPGLI 97
Query: 76 PSWSDQPHNEKILHSVKRFIKKTPPDIVLYLDRLDMQSRDFSDMPLLRTITDIFGPPIWF 135
N++ ++ +KRF+ D++LY+DRLD+ D D ++ ITD FG IW
Sbjct: 98 EGGYV---NDQAINIIKRFLLNMTIDVLLYVDRLDVYRVDDLDRQVVGAITDAFGKEIWK 154
Query: 136 NAIVVLTHAASAPPDGPNGTPSSYDMFVTQRSHVVQQAIRQAA----GDMRLMN-PVSLV 190
+ +VLTHA +PPDG N Y+ FV++RS+ + + I+ A D++ + PV LV
Sbjct: 155 KSALVLTHAQFSPPDGLN-----YNHFVSKRSNALLKVIQTGAQLKKQDLQGFSIPVILV 209
Query: 191 ENHSACRTNTAGQRVLPNGQVWKPQLL----LLSFASKILAEANALLKLQDNPREKPYTA 246
EN C N + +++LP G W P L +SF + L NP E+
Sbjct: 210 ENSGRCHKNESDEKILPCGTSWIPNLFNKITEISFNGNKAIHVDKKLVEGPNPNER---- 265
Query: 247 RARAPPLPFLLSSLLQSRPQLKLPEDQFSDEDSLNDDLDEPSDSG 291
+ PL F LL +P ++ + S E L +L DSG
Sbjct: 266 GKKLIPLMFAFQYLLVMKPLVRAIKSDVSRESKLAWEL---RDSG 307
>GIM5_HUMAN (Q96F15) GTPase, IMAP family member 5
(Immunity-associated nucleotide 4-like 1 protein)
(Immunity-associated protein 3) (IAN-5)
Length = 307
Score = 46.6 bits (109), Expect = 2e-04
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 19 IMVLGKSGVGKSSTINSIFDEVKFNTDAFHMG-TKKVQDVVGMVQGIKVRVIDTPGLLPS 77
I+++GK+G GKS+T NSI + F + T+ Q G G KV V+DTP + S
Sbjct: 30 IILVGKTGCGKSATGNSILGQPVFESKLRAQSVTRTCQVKTGTWNGRKVLVVDTPSIFES 89
Query: 78 WSDQPHNEKILHSVKRFIKKTP-PDIVLYLDRLDMQSRDFSDMPLLRTITDIFGPPIWFN 136
+D K + ++ P P ++L + +L + D +R + ++FG +
Sbjct: 90 QADTQELYKNIGDC--YLLSAPGPHVLLLVIQLGRFTA--QDTVAIRKVKEVFGTGAMRH 145
Query: 137 AIVVLTH 143
+++ TH
Sbjct: 146 VVILFTH 152
>GIM2_HUMAN (Q9UG22) GTPase, IMAP family member 2
(Immunity-associated protein 2) (hIMAP2)
Length = 337
Score = 45.4 bits (106), Expect = 5e-04
Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 14/131 (10%)
Query: 19 IMVLGKSGVGKSSTINSIFDEVKFNTDAFHMGTKKVQDVVGMVQGI----KVRVIDTPGL 74
I+++GK+G GKS+ NSI + F + +G++ + QG ++ +IDTP +
Sbjct: 25 IILVGKTGTGKSAAGNSILRKQAFES---KLGSQTLTKTCSKSQGSWGNREIVIIDTPDM 81
Query: 75 LPSWSDQPHNEKILHSVKR-FIKKTP-PDIVLYLDRLDMQSRDFSDMPLLRTITDIFGPP 132
SW D H E + V+R ++ P P ++L + +L + D + + +IFG
Sbjct: 82 F-SWKD--HCEALYKEVQRCYLLSAPGPHVLLLVTQLGRYTS--QDQQAAQRVKEIFGED 136
Query: 133 IWFNAIVVLTH 143
+ IV+ TH
Sbjct: 137 AMGHTIVLFTH 147
>GIM4_MOUSE (Q99JY3) GTPase, IMAP family member 4
(Immunity-associated protein 4) (Immunity-associated
nucleotide 1 protein)
Length = 219
Score = 44.3 bits (103), Expect = 0.001
Identities = 36/125 (28%), Positives = 58/125 (45%), Gaps = 4/125 (3%)
Query: 19 IMVLGKSGVGKSSTINSIFDEVKFNTDAFHMG-TKKVQDVVGMVQGIKVRVIDTPGLLPS 77
I++LGK+G GKSST NSI E FN+ TK + V G ++ V+DTPG+ +
Sbjct: 33 IVLLGKTGAGKSSTGNSILGEKVFNSGICAKSITKVCEKRVSTWDGKELVVVDTPGIFDT 92
Query: 78 WSDQPHNEKILHSVKRFIKKTPPDIVLYLDRLDMQSRDFSDMPLLRTITDIFGPPIWFNA 137
++ + R++ T P L + + + + I D+FG
Sbjct: 93 EVPDADTQR---EITRYVALTSPGPHALLLVVPLGRYTVEEHKATQKILDMFGKQARRFM 149
Query: 138 IVVLT 142
I++LT
Sbjct: 150 ILLLT 154
>IAN4_MOUSE (Q99MI6) Immunity-associated nucleotide 4 protein
Length = 301
Score = 43.5 bits (101), Expect = 0.002
Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 10/138 (7%)
Query: 7 SAGQEPLDFSCTIMVLGKSGVGKSSTINSIFDEVKFNTDAFHMG-TKKVQDVVGMVQGIK 65
++G PL I+++GKSG GKS+T NS+ F + T+ Q G +G
Sbjct: 17 TSGSRPL----RILLVGKSGCGKSATGNSLLRRPAFESRLRGQSVTRTSQAETGTWEGRS 72
Query: 66 VRVIDTPGLLPSWSDQPHNEKILHSVKRFIKKTP-PDIVLYLDRLDMQSRDFSDMPLLRT 124
+ V+DTP + S + +K + ++ P P ++L + +L + + D+ +R
Sbjct: 73 ILVVDTPPIFESKAQNQDMDKDIGDC--YLLCAPGPHVLLLVTQLGRFTAE--DVMAVRM 128
Query: 125 ITDIFGPPIWFNAIVVLT 142
+ ++FG + + IV+ T
Sbjct: 129 VKEVFGVGVMRHMIVLFT 146
>IAN4_RAT (Q8K3L6) Immunity-associated nucleotide 4 protein
Length = 326
Score = 43.1 bits (100), Expect = 0.002
Identities = 47/181 (25%), Positives = 77/181 (41%), Gaps = 17/181 (9%)
Query: 5 LESAGQEPLDFSCT----IMVLGKSGVGKSSTINSIFDEVKFNTDAFHMG-TKKVQDVVG 59
L S GQE + I+++GKSG GKS+T NSI F + T+ Q +G
Sbjct: 29 LLSTGQETYSVEDSGLLRILLVGKSGCGKSATGNSILRRPAFESRLRGQSVTRTSQAEMG 88
Query: 60 MVQGIKVRVIDTPGLLPSWSDQPHNEKILHSVKRFIKKTP-PDIVLYLDRLDMQSRDFSD 118
+G V+DTP + S +K + + ++ P P ++L + +L + D
Sbjct: 89 TWEGRSFLVVDTPPIFESKIQNQDMDKDIGNC--YLMCAPGPHVLLLVTQLGRYT--VED 144
Query: 119 MPLLRTITDIFGPPIWFNAIVVLTHAASAPPDGPNGTPSSYDMFVTQRSHVVQQAIRQAA 178
+R + IFG + IV+ TH + S + FVT ++ + Q
Sbjct: 145 AMAVRMVKQIFGVGVMRYMIVLFTHKEDLADE-------SLEEFVTHTGNLDLHRLVQEC 197
Query: 179 G 179
G
Sbjct: 198 G 198
>GIM5_MOUSE (Q8BWF2) GTPase, IMAP family member 5
(Immunity-associated nucleotide 4-like 1 protein)
(Immunity-associated protein 3)
Length = 308
Score = 42.7 bits (99), Expect = 0.003
Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 13/163 (7%)
Query: 19 IMVLGKSGVGKSSTINSIFDEVKFNTDAFHMG-TKKVQDVVGMVQGIKVRVIDTPGLLPS 77
I+++GKSG GKS+T NSI F + T+ Q G +G + V+DTP + S
Sbjct: 29 ILLVGKSGCGKSATGNSILRRPAFQSRLRGQSVTRTSQAETGTWEGRSILVVDTPPIFES 88
Query: 78 WSDQPHNEKILHSVKRFIKKTP-PDIVLYLDRLDMQSRDFSDMPLLRTITDIFGPPIWFN 136
+ +K + ++ P P ++L + +L + + D +R + ++FG + +
Sbjct: 89 KAQNQDMDKDIGDC--YLLCAPGPHVLLLVTQLGRFTAE--DAMAVRMVKEVFGVGVMRH 144
Query: 137 AIVVLTHAASAPPDGPNGTPSSYDMFVTQRSHVVQQAIRQAAG 179
IV+ T S + FVT + +++ Q G
Sbjct: 145 MIVLFTRKEDL-------EEKSLEEFVTHTDNRSLRSLTQECG 180
>CC10_CANAL (P39827) Cell division control protein 10
Length = 357
Score = 42.7 bits (99), Expect = 0.003
Identities = 31/97 (31%), Positives = 47/97 (47%), Gaps = 22/97 (22%)
Query: 15 FSCTIMVLGKSGVGKSSTINSIFDEVKFNTDAFHMGTKKVQDVVGMVQGIKV-------- 66
F IMV+G+SG+GKS+ +N++F K T G K + + IKV
Sbjct: 36 FQFNIMVVGRSGLGKSTLVNTLFSS-KLTTS---QGRKSPSEPIEKTTEIKVASHSLLEN 91
Query: 67 ------RVIDTPGLLPSWSDQPHNEKILHSVKRFIKK 97
VIDTPG + DQ +NEK + +++K+
Sbjct: 92 NVRLNINVIDTPG----FGDQINNEKCWEPLVKYVKE 124
>GIM7_HUMAN (Q8NHV1) GTPase, IMAP family member 7
(Immunity-associated nucleotide 7 protein)
Length = 300
Score = 41.6 bits (96), Expect = 0.007
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 11 EPLDFSCTIMVLGKSGVGKSSTINSIFDEVKFNTD-AFHMGTKKVQDVVGMVQGIKVRVI 69
E D S I+++GK+G GKS+T N+I E F++ A TK Q QG + V+
Sbjct: 3 ESEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVV 62
Query: 70 DTPGL 74
DTPGL
Sbjct: 63 DTPGL 67
>SEP3_MOUSE (Q9Z1S5) Neuronal-specific septin 3
Length = 465
Score = 41.2 bits (95), Expect = 0.009
Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 14/93 (15%)
Query: 15 FSCTIMVLGKSGVGKSSTINSIF-DEVKFNTDAFHMGTKKVQDV----VGMV---QGIKV 66
F IMV+G+SG+GKS+ +N++F +V +++ K + V +G V G+K+
Sbjct: 47 FDFNIMVVGQSGLGKSTLVNTLFKSQVSRKASSWNREEKIPKTVEIKAIGHVIEEGGVKM 106
Query: 67 R--VIDTPGLLPSWSDQPHNEKILHSVKRFIKK 97
+ VIDTPG + DQ +NE ++++I +
Sbjct: 107 KLTVIDTPG----FGDQINNENCWEPIEKYINE 135
>SEP3_HUMAN (Q9UH03) Neuronal-specific septin 3
Length = 345
Score = 41.2 bits (95), Expect = 0.009
Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 14/93 (15%)
Query: 15 FSCTIMVLGKSGVGKSSTINSIF-DEVKFNTDAFHMGTKKVQDV----VGMV---QGIKV 66
F IMV+G+SG+GKS+ +N++F +V +++ K + V +G V G+K+
Sbjct: 47 FDFNIMVVGQSGLGKSTLVNTLFKSQVSRKASSWNREEKIPKTVEIKAIGHVIEEGGVKM 106
Query: 67 R--VIDTPGLLPSWSDQPHNEKILHSVKRFIKK 97
+ VIDTPG + DQ +NE ++++I +
Sbjct: 107 KLTVIDTPG----FGDQINNENCWEPIEKYINE 135
>VSX1_BRARE (O42250) Visual system homeobox 1 (Transcription factor
VSX1)
Length = 344
Score = 40.0 bits (92), Expect = 0.020
Identities = 32/107 (29%), Positives = 50/107 (45%), Gaps = 9/107 (8%)
Query: 246 ARARAPPLPFLLSS---LLQSRPQ------LKLPEDQFSDEDSLNDDLDEPSDSGDETDP 296
A + P P L S LLQSR + L+ D +SD+D L+ D ++ +SG+
Sbjct: 90 AAQQPPGAPCFLPSHIPLLQSRTESHFMQNLEQQRDVYSDDDCLSGDRNDGKNSGNSQKR 149
Query: 297 DDLPPFKPLTKAQIRNLSRAQKKAYLDEVEYREKLFMKKQLKYEKKQ 343
T Q+ L +A +A+ +V RE L MK +L ++ Q
Sbjct: 150 KKRRHRTVFTSHQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQ 196
>GIM4_HUMAN (Q9NUV9) GTPase, IMAP family member 4
(Immunity-associated protein 4) (Immunity-associated
nucleotide 1 protein) (hIAN1) (MSTP062)
Length = 329
Score = 39.7 bits (91), Expect = 0.026
Identities = 29/98 (29%), Positives = 50/98 (50%), Gaps = 3/98 (3%)
Query: 10 QEPLDFSCTIMVLGKSGVGKSSTINSIFDEVKFNT-DAFHMGTKKVQDVVGMVQGIKVRV 68
QEP + I+++GK+G GKS+T NSI F++ A TKK + + ++ V
Sbjct: 24 QEPRNSQLRIVLVGKTGAGKSATGNSILGRKVFHSGTAAKSITKKCEKRSSSWKETELVV 83
Query: 69 IDTPGLLPSWSDQPHNEKILHSVKRFIKKTPPDIVLYL 106
+DTPG+ ++ P+ E ++ + +P L L
Sbjct: 84 VDTPGIFD--TEVPNAETSKEIIRCILLTSPGPHALLL 119
>ENGA_SYNY3 (P74120) GTP-binding protein engA
Length = 452
Score = 39.7 bits (91), Expect = 0.026
Identities = 22/74 (29%), Positives = 38/74 (50%)
Query: 1 MAEQLESAGQEPLDFSCTIMVLGKSGVGKSSTINSIFDEVKFNTDAFHMGTKKVQDVVGM 60
+ E L + +EP + + ++G+ VGKSS +N++ E + T+ D+V
Sbjct: 161 LLEYLPAPQEEPEEDEIKVAIVGRPNVGKSSLLNALTGEQRAIVSPISGTTRDAIDMVVE 220
Query: 61 VQGIKVRVIDTPGL 74
G K R+IDT G+
Sbjct: 221 RNGQKYRLIDTAGI 234
>SEP2_HUMAN (Q15019) Septin 2 (NEDD5 protein homolog)
Length = 361
Score = 38.9 bits (89), Expect = 0.044
Identities = 24/69 (34%), Positives = 39/69 (55%), Gaps = 10/69 (14%)
Query: 15 FSCTIMVLGKSGVGKSSTINSIFDEVKFNTDAFHMGTKKVQDVVGM--------VQGIKV 66
F T+MV+G+SG+GKS+ INS+F + +K++ V + +G+K+
Sbjct: 36 FEFTLMVVGESGLGKSTLINSLFLTDLYPERVIPGAAEKIERTVQIEASTVEIEERGVKL 95
Query: 67 R--VIDTPG 73
R V+DTPG
Sbjct: 96 RLTVVDTPG 104
>SEP2_MOUSE (P42208) Septin 2 (NEDD5 protein)
Length = 361
Score = 38.5 bits (88), Expect = 0.057
Identities = 24/69 (34%), Positives = 39/69 (55%), Gaps = 10/69 (14%)
Query: 15 FSCTIMVLGKSGVGKSSTINSIFDEVKFNTDAFHMGTKKVQDVVGM--------VQGIKV 66
F T+MV+G+SG+GKS+ INS+F + +K++ V + +G+K+
Sbjct: 36 FEFTLMVVGESGLGKSTLINSLFLTDLYPERIIPGAAEKIERTVQIEASTVEIEERGVKL 95
Query: 67 R--VIDTPG 73
R V+DTPG
Sbjct: 96 RLTVVDTPG 104
>YAP3_YEAST (P38749) AP-1 like transcription factor YAP3
Length = 330
Score = 37.7 bits (86), Expect = 0.097
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 274 FSDEDSLNDDLDEPSDSGDETDPDDLPPFKPLTKAQIRNLSRAQKKAYLDEVEYREKLFM 333
FS + ++ PS + +E PDD +KA+ + +RA +KA+ + E R K
Sbjct: 121 FSKNNGISPSSRSPSVAHNENVPDD-------SKAKKKAQNRAAQKAFRERKEARMKELQ 173
Query: 334 KKQLKYEKKQRKMMKEMAE 352
K L+ E+ ++ ++KE+ E
Sbjct: 174 DKLLESERNRQSLLKEIEE 192
>GIM4_RAT (Q8K3K9) GTPase, IMAP family member 4 (Immunity-associated
protein 4) (Immunity-associated nucleotide 1 protein)
Length = 310
Score = 37.7 bits (86), Expect = 0.097
Identities = 27/83 (32%), Positives = 41/83 (48%), Gaps = 4/83 (4%)
Query: 19 IMVLGKSGVGKSSTINSIFDEVKFNTDAFHMG-TKKVQDVVGMVQGIKVRVIDTPGLLPS 77
I++LGK+G GKSST NSI F + TK + V + G ++ V+DTPG+ +
Sbjct: 33 IVLLGKTGAGKSSTGNSILGRKAFLSGICAKSITKVCEKGVSIWDGKELVVVDTPGIFDT 92
Query: 78 WSDQPHNEKILHSVKRFIKKTPP 100
+K + R + T P
Sbjct: 93 EVPDADTQK---EITRCVALTSP 112
>FKB4_SPOFR (Q26486) 46 kDa FK506-binding nuclear protein (EC
5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase)
(Rotamase)
Length = 412
Score = 37.7 bits (86), Expect = 0.097
Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 272 DQFSDEDSLNDDLDEPSDSGDETDPDDLPPFKPLTKA--QIRNLSRAQKKAYLDEVEYRE 329
D +ED D+ DE D D+ + ++ P K A Q L +++ + ++ +
Sbjct: 190 DDSDEEDDDEDEEDEEDDDEDDEEEEEAPKKKKKQPAAEQDSTLDTSKESVDMSKLSKSQ 249
Query: 330 KLFMKKQLKYEKKQRKMMKEMAESVKDLPSDYVENVEEES 369
K +KK+L+ + KQ+ + + + K+ P E + E+
Sbjct: 250 KRRLKKKLQQQAKQQPQVNGVDKPKKEEPQQKAEKKKPEA 289
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.316 0.134 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,094,887
Number of Sequences: 164201
Number of extensions: 3510705
Number of successful extensions: 13810
Number of sequences better than 10.0: 193
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 129
Number of HSP's that attempted gapping in prelim test: 13601
Number of HSP's gapped (non-prelim): 261
length of query: 663
length of database: 59,974,054
effective HSP length: 117
effective length of query: 546
effective length of database: 40,762,537
effective search space: 22256345202
effective search space used: 22256345202
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)
Medicago: description of AC147010.6