Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC147010.11 - phase: 0 /pseudo
         (2172 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

PLSX_THEMA (Q9WXZ6) Fatty acid/phospholipid synthesis protein plsX     35  1.7
PHBB_ALCEU (P14697) Acetoacetyl-CoA reductase (EC 1.1.1.36)            35  2.3

>PLSX_THEMA (Q9WXZ6) Fatty acid/phospholipid synthesis protein plsX
          Length = 327

 Score = 35.4 bits (80), Expect = 1.7
 Identities = 36/130 (27%), Positives = 54/130 (40%), Gaps = 25/130 (19%)

Query: 718 KNVLGEIDLPITIGPENFLVTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLKFIRNG 777
           K V GEI   + IGPE  +    +  ++AS    +  P +       S++H  LK +  G
Sbjct: 26  KEVEGEI---VLIGPEEIVKNKGLPFVSASEIVKMDDPPLEVLRKKNSSMHMGLKLLSEG 82

Query: 778 KLVTVHGEEAYLVSQLSSFSCIEAGSAEGTAFQGLT-----IEGAEPKKAGAAMASLKDA 832
           K+      +A++           +  A G  F G T     +EG E    G A+ SLK A
Sbjct: 83  KV------DAFV-----------SAGATGPLFLGATSIVGKLEGIERPALGVAVPSLKGA 125

Query: 833 QKVIQDGQTA 842
             +I  G  A
Sbjct: 126 TVLIDAGANA 135


>PHBB_ALCEU (P14697) Acetoacetyl-CoA reductase (EC 1.1.1.36)
          Length = 246

 Score = 35.0 bits (79), Expect = 2.3
 Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%)

Query: 826 MASLKDAQKVIQDGQT-AGWGKVIQLCE-NKRKEGLGFSPSSKVSSGVFHSAGFVNAISE 883
           + SL +  K + DG    GWG+++ +   N +K   G +  S   +G+    GF  A+++
Sbjct: 113 LTSLFNVTKQVIDGMADRGWGRIVNISSVNGQKGQFGQTNYSTAKAGLH---GFTMALAQ 169

Query: 884 EANGSGLRPAFVTPGGIARD 903
           E    G+    V+PG IA D
Sbjct: 170 EVATKGVTVNTVSPGYIATD 189


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.354    0.154    0.541 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 200,238,661
Number of Sequences: 164201
Number of extensions: 7023906
Number of successful extensions: 29635
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 29633
Number of HSP's gapped (non-prelim): 2
length of query: 2172
length of database: 59,974,054
effective HSP length: 126
effective length of query: 2046
effective length of database: 39,284,728
effective search space: 80376553488
effective search space used: 80376553488
T: 11
A: 40
X1: 14 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.6 bits)
S2: 74 (33.1 bits)


Medicago: description of AC147010.11