BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147007.4 - phase: 0
(419 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CYAA_YEAST (P08678) Adenylate cyclase (EC 4.6.1.1) (ATP pyrophos... 39 0.032
YP01_HUMAN (Q7Z4Q2) Hypothetical protein FLJ20718 37 0.12
YK44_YEAST (P36023) Putative 101.8 kDa transcriptional regulator... 34 0.80
LOXR_HUMAN (O75342) Arachidonate 12-lipoxygenase, 12R type (EC 1... 33 1.8
PARC_RICPR (Q9ZE79) Topoisomerase IV subunit A (EC 5.99.1.-) 32 3.0
FXL4_HUMAN (Q9UKA2) F-box/LRR-repeat protein 4 (F-box and leucin... 32 4.0
YE44_ACIAD (P07777) Hypothetical protein ACIAD1444 (ORF2) 31 5.2
G13A_DICDI (P34115) Cell surface glycoprotein gp138A precursor 31 5.2
YD49_YEAST (Q02354) Hypothetical 52.4 kDa protein in ADA2-RPS18A... 31 6.8
TCPD_CANGA (Q6FQT2) T-complex protein 1, delta subunit (TCP-1-de... 31 6.8
DIP2_YEAST (Q12220) DOM34 interacting protein 2 31 6.8
RNA1_SCHPO (P41391) Ran GTPase-activating protein 1 (Protein rna1) 30 8.8
NOT1_YEAST (P25655) General negative regulator of transcription ... 30 8.8
LOXR_MOUSE (O70582) Arachidonate 12-lipoxygenase, 12R type (EC 1... 30 8.8
FX42_MOUSE (Q6PDJ6) F-box only protein 42 30 8.8
FX42_HUMAN (Q6P3S6) F-box only protein 42 30 8.8
>CYAA_YEAST (P08678) Adenylate cyclase (EC 4.6.1.1) (ATP
pyrophosphate-lyase) (Adenylyl cyclase)
Length = 2026
Score = 38.5 bits (88), Expect = 0.032
Identities = 63/249 (25%), Positives = 104/249 (41%), Gaps = 29/249 (11%)
Query: 107 LRYNVRTSPNFNIIEKCSRKTLEVLTLASNPISGVEPKYHKFPCLKSLSLSFVSISALDL 166
LRYN +S K + L+ L L N IS E K L+ SIS D
Sbjct: 984 LRYNRISSI------KTNASNLQNLFLTDNRISNFEDTLPKLRALEIQENPITSISFKDF 1037
Query: 167 ------SLLLSACPKLETLSIVCPEIAMSDSEASIELSSSSLKDFFVESYSFDKLILVAD 220
SL L+ K + SI + +EL+ ++L E KL+ ++
Sbjct: 1038 YPKNMTSLTLN---KAQLSSIPGELLTKLSFLEKLELNQNNLTRLPQEISKLTKLVFLSV 1094
Query: 221 MLENLHLKDCSFDAFELINKGTLKVLKLDDVSVIHLDIGDNTENLEI--VDVCNFIF--- 275
L + EL +L+ L L ++ D D ENLE+ +++ + F
Sbjct: 1095 ARNKLE-----YIPPELSQLKSLRTLDLHSNNI--RDFVDGMENLELTSLNISSNAFGNS 1147
Query: 276 -MWQNFYNMISKASKLKKLRLWSVVFDDEDEVVDIETISVCFPRLTHLSLSYDLKDGVLH 334
+ +FY+ +S SKL K ++ + D++ + + + CF L L+LSY+ V H
Sbjct: 1148 SLENSFYHNMSYGSKLSKSLMFFIAADNQFDDA-MWPLFNCFVNLKVLNLSYNNFSDVSH 1206
Query: 335 YGLQGLSFL 343
L+ ++ L
Sbjct: 1207 MKLESITEL 1215
>YP01_HUMAN (Q7Z4Q2) Hypothetical protein FLJ20718
Length = 680
Score = 36.6 bits (83), Expect = 0.12
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 10/174 (5%)
Query: 90 VTPVIAWLMYTRDSL--RELRYNVRTSPNFNIIEKCSRKTLEVLTLASNPISGVEPKYHK 147
+TP++A L L E+ + N N IE + +T+ VL S ++K
Sbjct: 124 MTPLVALLKECSAGLDSNEMSLQEKKDQNRNSIENIANETVNVLWNICECSSRAVSIFNK 183
Query: 148 FPCLKSLSLSFVSISALDLSLLLSACPKLETLSIVCPEIAMSDSEASIELSSSSLKDFFV 207
CL+ + L ++S ++ L +S L+T++ PE+ S S ++ + S+L
Sbjct: 184 EGCLE-IVLKYLSRFPTNVDLAISVAYCLQTVTEDNPELLKSFSATALNMLESALLSPVS 242
Query: 208 ESYSFDKLILVADMLENL-HLKDCSFDAFELINKGTLKVLKLDDVSVIHLDIGD 260
S LVA + NL + C A E+IN LK+L V+ +D G+
Sbjct: 243 SMESLLLKTLVAGTIWNLKDIIPCKSQA-EIIN-ALLKILS----EVLGMDAGE 290
>YK44_YEAST (P36023) Putative 101.8 kDa transcriptional regulatory
protein in LAS1-CCP1 intergenic region
Length = 863
Score = 33.9 bits (76), Expect = 0.80
Identities = 26/97 (26%), Positives = 44/97 (44%), Gaps = 8/97 (8%)
Query: 186 IAMSDSEASIE----LSSSSLKDFFVESYSFDKLILVADMLENLHLKDCSFDAFELINKG 241
I +D + IE +SS +F E Y + + A + + + C DA+ +I K
Sbjct: 641 IQYADKKKMIEFLYGVSSVYFNEFGFEYYRCFRKMFTAKIAYKILNRSCEKDAWRIILKF 700
Query: 242 TLKVLKLDDVSVIHLDIGDNTENLEIVDVCNFIFMWQ 278
L LKL+D ++D D + + D+C I +Q
Sbjct: 701 LLNELKLEDNGDSYIDYND----MRLNDICPIILEFQ 733
>LOXR_HUMAN (O75342) Arachidonate 12-lipoxygenase, 12R type (EC
1.13.11.-) (Epidermis-type lipoxygenase 12)
(12R-lipoxygenase) (12R-LOX)
Length = 701
Score = 32.7 bits (73), Expect = 1.8
Identities = 19/69 (27%), Positives = 33/69 (47%)
Query: 71 QTKGLQCLTIFMDDEHEFSVTPVIAWLMYTRDSLRELRYNVRTSPNFNIIEKCSRKTLEV 130
QTKGL L FMD + T + +++T + R + P+ + +E+ R+++E
Sbjct: 605 QTKGLTTLETFMDTLPDVKTTCITLLVLWTLSREPDDRRPLGHFPDIHFVEEAPRRSIEA 664
Query: 131 LTLASNPIS 139
N IS
Sbjct: 665 FRQRLNQIS 673
>PARC_RICPR (Q9ZE79) Topoisomerase IV subunit A (EC 5.99.1.-)
Length = 738
Score = 32.0 bits (71), Expect = 3.0
Identities = 20/108 (18%), Positives = 50/108 (45%), Gaps = 7/108 (6%)
Query: 119 IIEKCSRKTLEVLTLASNPISGVEPKYHKFPCLKSLSLSFVSISALDLSLLLSACPKLET 178
I+EK + E+ + I V+ K+ + + SF + + + ++A E
Sbjct: 449 ILEKILKNHKELWQIVKKEIKAVQTKFGLNTIIGARRTSFEEVDLTNQVVDITAFITKEP 508
Query: 179 LSIVCPEIAMSDSE-------ASIELSSSSLKDFFVESYSFDKLILVA 219
++I+C ++ S ++I+ + F +E+Y+ DK+++++
Sbjct: 509 ITIICSKMGWVRSLKGHNTDLSTIKYKEGDTEKFIIEAYTTDKILIIS 556
>FXL4_HUMAN (Q9UKA2) F-box/LRR-repeat protein 4 (F-box and
leucine-rich repeat protein 4) (F-box protein FBL4/FBL5)
Length = 621
Score = 31.6 bits (70), Expect = 4.0
Identities = 47/185 (25%), Positives = 76/185 (40%), Gaps = 12/185 (6%)
Query: 2 EDLPVEVVGIILSHLGSARDVLIASLTCKKWREAWQTHLQTLSFNTSDWPLYREICSSHL 61
+ LP E++ +IL+HL + D+ + TCK + LQ + N P + ++ + L
Sbjct: 281 DKLPYELIQLILNHL-TLPDLCRLAQTCKLLSQHCCDPLQYIHLNLQ--PYWAKLDDTSL 337
Query: 62 EMLIT-CTLFQTKGLQCLTIFMDDEHEFSVTPVIAWLMYTRDSLRELRYNVRTSPNFNII 120
E L + CTL Q L + + SV +L L L + N +
Sbjct: 338 EFLQSRCTLVQWLNLS----WTGNRGFISVAGFSRFLKVCGSELVRLELSCSHFLNETCL 393
Query: 121 EKCSR--KTLEVLTLASNPISGVEPKYH--KFPCLKSLSLSFVSISALDLSLLLSACPKL 176
E S L+ L L+S + H K LK L L + L +L+ C +L
Sbjct: 394 EVISEMCPNLQALNLSSCDKLPPQAFNHIAKLCSLKRLVLYRTKVEQTALLSILNFCSEL 453
Query: 177 ETLSI 181
+ LS+
Sbjct: 454 QHLSL 458
>YE44_ACIAD (P07777) Hypothetical protein ACIAD1444 (ORF2)
Length = 509
Score = 31.2 bits (69), Expect = 5.2
Identities = 24/106 (22%), Positives = 49/106 (45%), Gaps = 8/106 (7%)
Query: 21 DVLIASLTCKKWREAWQTHLQTLSFNTSDWPLYREICSSHLEMLITCTLFQTKGLQCLTI 80
D+ +A + ++WREA+ T L+ +F+ + W +I + + F K ++
Sbjct: 23 DIQLALQSMQQWREAFATALKQNTFDLTGWSPQTKIANQLKQ-------FNHKLTTHVSN 75
Query: 81 FMDDEHEFSVTPVIAWLMYTRDSLREL-RYNVRTSPNFNIIEKCSR 125
+ + H FS +A + + R L ++N S N++ +C R
Sbjct: 76 WDTEWHTFSAAQSVAEVFHDRVMLLVFGKFNAGKSSLCNLLAECFR 121
>G13A_DICDI (P34115) Cell surface glycoprotein gp138A precursor
Length = 730
Score = 31.2 bits (69), Expect = 5.2
Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 20/184 (10%)
Query: 217 LVADMLENLHLKDCSFDAF-------ELINKG----TLKVLKLDDVSVIHLDIGDNT--E 263
+++D+L NL+ D S D E IN T+K L L ++ D T +
Sbjct: 29 VMSDLLFNLYGYDKSLDPCNNNYVECEYINTTSTIQTVKSLSLGAPLHQYVITQDLTPLQ 88
Query: 264 NLEIVDVCNFIFMWQNFYNMISKASKLKKLRLWSVVFDDEDEVV---DIETISVCFPR-- 318
NL +V I++ +F+N I+K S+L+++ +S+ D+ + ET ++ P
Sbjct: 89 NLTSFEVNEKIYLTSSFFNYINKFSQLERIVTYSLNLTIPDDTIFPAIFETFTIYKPSVP 148
Query: 319 LTHLSLSYDLKDGVLHYGLQGLSF--LMNVVVLELGWTTISDLFSVWVAGLLEGCPNLKK 376
L+ + +K+ + L G S L+NV +S + + L + PNL+
Sbjct: 149 LSKVIFESPIKNLYVDSPLTGYSIPTLVNVNPYLGNLQLPVTYYSGFPSNLSQAFPNLQY 208
Query: 377 MVIY 380
+ IY
Sbjct: 209 LAIY 212
>YD49_YEAST (Q02354) Hypothetical 52.4 kDa protein in ADA2-RPS18A
intergenic region
Length = 440
Score = 30.8 bits (68), Expect = 6.8
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Query: 187 AMSDSEASIELSSSSLKDFFVESYSFDKLI-----LVADMLENLHLKDCSFDAFELINKG 241
A+SDS+ +IEL+ +L F ES + KL L D L N L+ D ++L +
Sbjct: 294 AISDSKMNIELNKETLNYLFSESLRYIKLFDEFLDLERDYLINHVLQFWKNDMYDLSLRK 353
Query: 242 TLKVLKLDDVSVIHLDIGDNTENLEIVDVCNFIFMWQNFYNMISK--ASKLKKLR 294
L L L V +I + + +E +D+ + ++ ISK ++ +K L+
Sbjct: 354 DLPELYLKTV-MIDITLNIRYMPVEKLDIDQLQLSVKKYFAYISKLDSASVKSLK 407
>TCPD_CANGA (Q6FQT2) T-complex protein 1, delta subunit
(TCP-1-delta) (CCT-delta)
Length = 529
Score = 30.8 bits (68), Expect = 6.8
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 176 LETLSIVCPEIAMSDSEASIELSSSSLKDFFVESYSFDKLILVADMLENLHLKDCSFDAF 235
+ETL +C +++ D E I +S+SL V YS L + DA
Sbjct: 133 VETLLEICHPVSLDDREDLIRAASTSLSSKIVSQYS-------------SFLSPLAVDAV 179
Query: 236 ELINKGTLKVLKLDDVSVIHLDIGDNTENLEIVD 269
I + K + L+D+ ++ +G + E+VD
Sbjct: 180 LSITEKDSKTVDLNDIRLVK-KVGGTIGDTEMVD 212
>DIP2_YEAST (Q12220) DOM34 interacting protein 2
Length = 943
Score = 30.8 bits (68), Expect = 6.8
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 178 TLSIVCPEIAMSDSEASIELSSSSLKDFFVESYSFDKLILVADMLENLHLKDCSFDAFEL 237
T I+C ++ D +I L +++K FF++S F L L L L + D SFD+ +
Sbjct: 531 TDDILCVRVSPDDRYLAISLLDNTVKVFFLDSMKF-YLSLYGHKLPVLSI-DISFDSKMI 588
Query: 238 INKGTLKVLKLDDVSVIHLDIGDNTENL 265
I K ++ + LD GD ++L
Sbjct: 589 ITSSADK-----NIKIWGLDFGDCHKSL 611
>RNA1_SCHPO (P41391) Ran GTPase-activating protein 1 (Protein rna1)
Length = 386
Score = 30.4 bits (67), Expect = 8.8
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 330 DGVLHYGLQGLSFLMNVVVLELGWTTISDLFSVWVAGLLEGCPNLKKM 377
+G+ H L+GL++ + VL+L T + L S +A L+ PNL+++
Sbjct: 202 EGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLREL 249
>NOT1_YEAST (P25655) General negative regulator of transcription
subunit 1
Length = 2108
Score = 30.4 bits (67), Expect = 8.8
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 45 FNTSDWPLYREICSSHLEMLITCTLFQTKGLQCLTIFMDDEHEFSVTPVIAWLM 98
F TS+ PL RE+ S LE L + +L K + ++ D +F+V PVI L+
Sbjct: 1429 FATSESPLCREVLSLLLEKLCSLSLVARKDVVWWLVYALDSRKFNV-PVIRSLL 1481
>LOXR_MOUSE (O70582) Arachidonate 12-lipoxygenase, 12R type (EC
1.13.11.-) (Epidermis-type lipoxygenase 12)
(12R-lipoxygenase) (12R-LOX) (Epidermis-type
lipoxygenase 2) (e-LOX 2)
Length = 701
Score = 30.4 bits (67), Expect = 8.8
Identities = 18/69 (26%), Positives = 34/69 (49%)
Query: 71 QTKGLQCLTIFMDDEHEFSVTPVIAWLMYTRDSLRELRYNVRTSPNFNIIEKCSRKTLEV 130
QTKGL L +MD + T ++ +++T + R + P+ + +E+ R+++E
Sbjct: 605 QTKGLTTLQTYMDTLPDVKTTCIVLLVLWTLCREPDDRRPLGHFPDIHFVEEGPRRSIEA 664
Query: 131 LTLASNPIS 139
N IS
Sbjct: 665 FRQNLNQIS 673
>FX42_MOUSE (Q6PDJ6) F-box only protein 42
Length = 717
Score = 30.4 bits (67), Expect = 8.8
Identities = 14/32 (43%), Positives = 20/32 (61%)
Query: 1 MEDLPVEVVGIILSHLGSARDVLIASLTCKKW 32
M +LP EV+ ILS L ++ A+L CK+W
Sbjct: 47 MSELPEEVLEYILSFLSPYQEHKTAALVCKQW 78
>FX42_HUMAN (Q6P3S6) F-box only protein 42
Length = 717
Score = 30.4 bits (67), Expect = 8.8
Identities = 14/32 (43%), Positives = 20/32 (61%)
Query: 1 MEDLPVEVVGIILSHLGSARDVLIASLTCKKW 32
M +LP EV+ ILS L ++ A+L CK+W
Sbjct: 47 MSELPEEVLEYILSFLSPYQEHKTAALVCKQW 78
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.323 0.138 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,388,091
Number of Sequences: 164201
Number of extensions: 1897074
Number of successful extensions: 4347
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 4340
Number of HSP's gapped (non-prelim): 19
length of query: 419
length of database: 59,974,054
effective HSP length: 113
effective length of query: 306
effective length of database: 41,419,341
effective search space: 12674318346
effective search space used: 12674318346
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 67 (30.4 bits)
Medicago: description of AC147007.4