BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147007.11 - phase: 0
(145 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YADR_ECOLI (P37026) Hypothetical protein yadR 79 3e-15
YADR_HAEIN (P45344) Protein HI1723 75 5e-14
YI57_AQUAE (O67709) Protein AQ_1857 74 8e-14
Y205_BUCAP (O51930) Hypothetical protein BUsg205 73 2e-13
YG67_XYLFT (P64343) Hypothetical protein PD1667 73 2e-13
Y405_XYLFA (P64342) Hypothetical protein Xf0405 73 2e-13
Y684_HAEDU (Q9X4A0) Hypothetical protein HD0684 71 7e-13
Y211_BUCAI (P57307) Hypothetical protein BU211 69 3e-12
YFHF_HAEIN (P44672) Hypothetical protein HI0376 63 2e-10
Y063_RICPR (Q9ZE83) Hypothetical protein RP063 61 7e-10
YM04_MYCTU (Q10393) Protein Rv2204c/MT2260/Mb2227c 61 9e-10
Y193_BUCBP (Q89AQ6) Hypothetical protein bbp193 60 1e-09
YUTM_BACSU (O32113) Hypothetical protein yutM 60 2e-09
YH55_BRAJA (P37029) Hypothetical protein blr1755 60 2e-09
YFHF_ECOLI (P36539) Protein yfhF 58 6e-09
Y4VC_RHISN (Q53211) Hypothetical 11.0 kDa protein y4vC 58 8e-09
YNIU_AZOVI (Q44540) Hypothetical 11.0 kDa protein in nifU 5'regi... 57 2e-08
HEB1_ANAVA (P46051) Protein hesB, heterocyst 56 2e-08
YNIU_FRAAL (Q47887) Hypothetical 14.1 kDa protein in nifB-nifU i... 56 3e-08
HESB_ANASP (P18501) Protein hesB 56 3e-08
>YADR_ECOLI (P37026) Hypothetical protein yadR
Length = 114
Score = 79.3 bits (194), Expect = 3e-15
Identities = 41/92 (44%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 50 PVHITENCVRKMKELDANESSSGGKMLRLSVETGGCSGFQYAFNLDDRFNSDDRVFEKEG 109
P+ T+ K+K L A+E + K LR+ + GGCSGFQY F DD+ N D EK+G
Sbjct: 8 PLEFTDAAANKVKSLIADEDNPNLK-LRVYITGGGCSGFQYGFTFDDQVNEGDMTIEKQG 66
Query: 110 IKLVVDNISYDFVKGATVDYVEELIRSAFIVS 141
+ LVVD +S ++ G +VDY E L S FIV+
Sbjct: 67 VGLVVDPMSLQYLVGGSVDYTEGLEGSRFIVT 98
>YADR_HAEIN (P45344) Protein HI1723
Length = 114
Score = 75.1 bits (183), Expect = 5e-14
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 50 PVHITENCVRKMKELDANESSSGGKMLRLSVETGGCSGFQYAFNLDDRFNSDDRVFEKEG 109
P+ T+ K+K L + E ++ K LR+ + GGCSGFQY F D++ N D EK G
Sbjct: 8 PLTFTDAAANKVKSLISEEENTDLK-LRVYITGGGCSGFQYGFTFDEKVNDGDLTIEKSG 66
Query: 110 IKLVVDNISYDFVKGATVDYVEELIRSAFIVS 141
++LV+D +S ++ G TVDY E L S F V+
Sbjct: 67 VQLVIDPMSLQYLIGGTVDYTEGLEGSRFTVN 98
>YI57_AQUAE (O67709) Protein AQ_1857
Length = 116
Score = 74.3 bits (181), Expect = 8e-14
Identities = 35/88 (39%), Positives = 54/88 (60%), Gaps = 1/88 (1%)
Query: 53 ITENCVRKMKELDANESSSGGKMLRLSVETGGCSGFQYAFNLDDRFNSDDRVFEKEGIKL 112
+T+ V ++K++ A E++ +LR+ V GGCSGFQYA DD D VFE +G+K+
Sbjct: 12 VTDKAVEEIKKV-AQENNIENPILRIRVVPGGCSGFQYAMGFDDTVEEGDHVFEYDGVKV 70
Query: 113 VVDNISYDFVKGATVDYVEELIRSAFIV 140
V+D S +V GA +DYV + + F +
Sbjct: 71 VIDPFSMPYVNGAELDYVVDFMGGGFTI 98
>Y205_BUCAP (O51930) Hypothetical protein BUsg205
Length = 114
Score = 73.2 bits (178), Expect = 2e-13
Identities = 37/94 (39%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 48 VEPVHITENCVRKMKELDANESSSGGKMLRLSVETGGCSGFQYAFNLDDRFNSDDRVFEK 107
++ + T + +K+K + + + K LR+ + GGCSGFQY F D++ N DD + +K
Sbjct: 6 IKYIEFTNSAAKKIKSIIKEKKNKNVK-LRIYIIGGGCSGFQYQFIFDEKINEDDILVKK 64
Query: 108 EGIKLVVDNISYDFVKGATVDYVEELIRSAFIVS 141
I LV+D IS ++ G T+DY+E L S FIVS
Sbjct: 65 LNICLVIDPISLQYLHGGTIDYLENLEGSKFIVS 98
>YG67_XYLFT (P64343) Hypothetical protein PD1667
Length = 128
Score = 72.8 bits (177), Expect = 2e-13
Identities = 37/104 (35%), Positives = 60/104 (57%), Gaps = 5/104 (4%)
Query: 41 SSPSSPDVE----PVHITENCVRKMKELDANESSSGGKMLRLSVETGGCSGFQYAFNLDD 96
++PS P+ + P++ T K++EL E ++ LR+ ++ GGCSGFQY F D+
Sbjct: 9 TAPSVPNYQSLERPLNFTMAAAAKVREL-IQEENNADLALRVYIQGGGCSGFQYGFEFDE 67
Query: 97 RFNSDDRVFEKEGIKLVVDNISYDFVKGATVDYVEELIRSAFIV 140
DD E +G+ L+VD +S ++ GA VDY E L + F++
Sbjct: 68 NRADDDLALETDGVVLLVDPLSLQYLLGAEVDYTESLTGAKFVI 111
>Y405_XYLFA (P64342) Hypothetical protein Xf0405
Length = 128
Score = 72.8 bits (177), Expect = 2e-13
Identities = 37/104 (35%), Positives = 60/104 (57%), Gaps = 5/104 (4%)
Query: 41 SSPSSPDVE----PVHITENCVRKMKELDANESSSGGKMLRLSVETGGCSGFQYAFNLDD 96
++PS P+ + P++ T K++EL E ++ LR+ ++ GGCSGFQY F D+
Sbjct: 9 TAPSVPNYQSLERPLNFTMAAAAKVREL-IQEENNADLALRVYIQGGGCSGFQYGFEFDE 67
Query: 97 RFNSDDRVFEKEGIKLVVDNISYDFVKGATVDYVEELIRSAFIV 140
DD E +G+ L+VD +S ++ GA VDY E L + F++
Sbjct: 68 NRADDDLALETDGVVLLVDPLSLQYLLGAEVDYTESLTGAKFVI 111
>Y684_HAEDU (Q9X4A0) Hypothetical protein HD0684
Length = 114
Score = 71.2 bits (173), Expect = 7e-13
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 44 SSPDVEPVHITENCVRKMKELDANESSSGGKMLRLSVETGGCSGFQYAFNLDDRFNSDDR 103
S D P+ T+ +K+K L E + + LR+ + GGCSGFQY F DD+ N D
Sbjct: 2 SDIDQIPLTFTDAAAKKVKSLIEGEDNPNLR-LRVYITGGGCSGFQYGFTFDDKINEGDL 60
Query: 104 VFEKEGIKLVVDNISYDFVKGATVDYVEELIRSAFIV 140
E + + L+VD +S ++ G +VDY E L S F+V
Sbjct: 61 TIENQNVGLIVDPMSLQYLIGGSVDYTEGLDGSRFVV 97
>Y211_BUCAI (P57307) Hypothetical protein BU211
Length = 114
Score = 68.9 bits (167), Expect = 3e-12
Identities = 35/90 (38%), Positives = 51/90 (55%), Gaps = 1/90 (1%)
Query: 51 VHITENCVRKMKELDANESSSGGKMLRLSVETGGCSGFQYAFNLDDRFNSDDRVFEKEGI 110
+ TE ++K+K L E + K LR+ + GGCSGFQY F D N DD + + +
Sbjct: 9 LQFTEKAIKKIKNLIEIEKNHDLK-LRIYINGGGCSGFQYQFIFDTSINEDDIIITQSEV 67
Query: 111 KLVVDNISYDFVKGATVDYVEELIRSAFIV 140
L++D IS ++ G +DY+E L S FIV
Sbjct: 68 SLIIDPISLQYLYGGQIDYLENLEGSKFIV 97
>YFHF_HAEIN (P44672) Hypothetical protein HI0376
Length = 107
Score = 63.2 bits (152), Expect = 2e-10
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 51 VHITENCVRKMKELDANESSSGGKMLRLSVETGGCSGFQYAFNLDDRFNSDDRVFEKEGI 110
+ +TE +++K N G LRL V+T GCSG Y D NS+D+VFE+ G+
Sbjct: 3 ITLTEKAAQRVKAFLDNRGKGIG--LRLGVKTSGCSGLAYVLEFVDVLNSEDQVFEQYGV 60
Query: 111 KLVVDNISYDFVKGATVDYVEELIRSAF 138
++VD S ++ G +DYV+E + F
Sbjct: 61 NIIVDPKSLVYLNGIELDYVKEGLNEGF 88
>Y063_RICPR (Q9ZE83) Hypothetical protein RP063
Length = 110
Score = 61.2 bits (147), Expect = 7e-10
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 51 VHITENCVRKMKELDANESSSGGKMLRLSVETGGCSGFQYAFNL--DDRFNSDDRVFEKE 108
+ IT+ ++ EL E +LR+SV++GGCSG Y + L D DD VF +
Sbjct: 3 ITITDRAFERIYELIELEKDKN-LVLRVSVDSGGCSGLMYNYELVSKDNIEKDDYVFTRH 61
Query: 109 GIKLVVDNISYDFVKGATVDYVEELIRSAFIVS 141
+++D+IS F+ T+D++EEL S F VS
Sbjct: 62 NATIIIDSISQKFMLNCTLDFIEELGSSYFNVS 94
>YM04_MYCTU (Q10393) Protein Rv2204c/MT2260/Mb2227c
Length = 118
Score = 60.8 bits (146), Expect = 9e-10
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 51 VHITENCVRKMKELDANESSSGGKMLRLSVETGGCSGFQYAFNLDDRFNSDDRVFEKEGI 110
V +TE K K L ++ LR++V+ GGC+G +Y DDR D+ E G+
Sbjct: 14 VILTEAAAAKAKSL-LDQEGRDDLALRIAVQPGGCAGLRYNLFFDDRTLDGDQTAEFGGV 72
Query: 111 KLVVDNISYDFVKGATVDYVEELIRSAFIV 140
+L+VD +S +V+GA++D+V+ + + F +
Sbjct: 73 RLIVDRMSAPYVEGASIDFVDTIEKQGFTI 102
>Y193_BUCBP (Q89AQ6) Hypothetical protein bbp193
Length = 115
Score = 60.5 bits (145), Expect = 1e-09
Identities = 28/91 (30%), Positives = 51/91 (55%), Gaps = 1/91 (1%)
Query: 50 PVHITENCVRKMKELDANESSSGGKMLRLSVETGGCSGFQYAFNLDDRFNSDDRVFEKEG 109
P+ +++ ++K+K + +E + R+ + GGCSGFQY F D N +D +
Sbjct: 9 PLSFSKSAIKKIKTI-ISEKNIPNLKFRVYIAGGGCSGFQYKFKFDKNKNKNDTIVNIFN 67
Query: 110 IKLVVDNISYDFVKGATVDYVEELIRSAFIV 140
+++D IS +++G +DY+E L S FI+
Sbjct: 68 NIIIIDPISLQYLRGGQIDYIENLEGSKFII 98
>YUTM_BACSU (O32113) Hypothetical protein yutM
Length = 120
Score = 60.1 bits (144), Expect = 2e-09
Identities = 29/91 (31%), Positives = 46/91 (49%), Gaps = 1/91 (1%)
Query: 50 PVHITENCVRKMKELDANESSSGGKMLRLSVETGGCSGFQYAFNLDDRFNSDDRVFEKEG 109
PV ITE +K++ E LR+ V+ GGCSG Y + + D VF++ G
Sbjct: 4 PVTITEAAALHIKDM-MKEHEEENAFLRVGVKGGGCSGLSYGMGFEHEKSESDSVFDQHG 62
Query: 110 IKLVVDNISYDFVKGATVDYVEELIRSAFIV 140
I ++VD S D + G +DY + ++ F +
Sbjct: 63 ITVLVDKESLDIMNGTVIDYKQSMLGGGFTI 93
>YH55_BRAJA (P37029) Hypothetical protein blr1755
Length = 106
Score = 60.1 bits (144), Expect = 2e-09
Identities = 28/81 (34%), Positives = 52/81 (63%), Gaps = 3/81 (3%)
Query: 51 VHITENCVRKMKE-LDANESSSGGKMLRLSVETGGCSGFQYAFNLDDRFNSDDRVFEKEG 109
+++T++ V +K + ++E +GG LR+ +E GGC+GF+Y + D DD V + +G
Sbjct: 2 INLTDSAVNAIKSAISSSERRAGG--LRVMIEAGGCNGFKYKMGIADEPKPDDTVIDCDG 59
Query: 110 IKLVVDNISYDFVKGATVDYV 130
+K+ VD+ S + + G T+D+V
Sbjct: 60 LKVFVDSKSREHLAGTTIDFV 80
>YFHF_ECOLI (P36539) Protein yfhF
Length = 107
Score = 58.2 bits (139), Expect = 6e-09
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 51 VHITENCVRKMKELDANESSSGGKMLRLSVETGGCSGFQYAFNLDDRFNSDDRVFEKEGI 110
+ ++++ ++ AN G LRL V T GCSG Y D +D VFE +G+
Sbjct: 3 ITLSDSAAARVNTFLANRGKGFG--LRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGV 60
Query: 111 KLVVDNISYDFVKGATVDYVEELIRSAF 138
K+VVD S F+ G +D+V+E + F
Sbjct: 61 KVVVDGKSLQFLDGTQLDFVKEGLNEGF 88
>Y4VC_RHISN (Q53211) Hypothetical 11.0 kDa protein y4vC
Length = 106
Score = 57.8 bits (138), Expect = 8e-09
Identities = 28/64 (43%), Positives = 36/64 (55%)
Query: 76 LRLSVETGGCSGFQYAFNLDDRFNSDDRVFEKEGIKLVVDNISYDFVKGATVDYVEELIR 135
LR+ VE GGCSGF+Y LD D V E G+K+ VD+ S V G TVD+ +
Sbjct: 26 LRIKVEAGGCSGFKYHLGLDSESRDGDAVIEAGGVKVYVDSASQPHVSGMTVDFTTGVDS 85
Query: 136 SAFI 139
+ FI
Sbjct: 86 AGFI 89
>YNIU_AZOVI (Q44540) Hypothetical 11.0 kDa protein in nifU 5'region
(ORF6)
Length = 107
Score = 56.6 bits (135), Expect = 2e-08
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 70 SSGGKM---LRLSVETGGCSGFQYAFNLDDRFNSDDRVFEKEGIKLVVDNISYDFVKGAT 126
SS GK LR+ VE GGCSG +Y+ L++ DD++ + +GI L++D+ S + G T
Sbjct: 17 SSTGKPIAGLRIRVEGGGCSGLKYSLKLEEAGAEDDQLVDCDGITLLIDSASAPLLDGVT 76
Query: 127 VDYVEELIRSAF 138
+D+VE + S F
Sbjct: 77 MDFVESMEGSGF 88
>HEB1_ANAVA (P46051) Protein hesB, heterocyst
Length = 123
Score = 56.2 bits (134), Expect = 2e-08
Identities = 27/74 (36%), Positives = 46/74 (61%), Gaps = 3/74 (4%)
Query: 65 DANESSSGGKMLRLSVETGGCSGFQYAFNLDDRFNSDDRVFEKEGIKLVVDNISYDFVKG 124
DANE++ G +R+SV+ GGCSG++Y ++ + DD V ++ + + VD S ++G
Sbjct: 23 DANETTKG---IRISVKDGGCSGYEYLMDVTSQPQPDDLVSQQGSVLVYVDAKSAPLLEG 79
Query: 125 ATVDYVEELIRSAF 138
+D+VE L+ S F
Sbjct: 80 IVIDFVEGLVESGF 93
>YNIU_FRAAL (Q47887) Hypothetical 14.1 kDa protein in nifB-nifU
intergenic region (ORF2)
Length = 135
Score = 55.8 bits (133), Expect = 3e-08
Identities = 28/88 (31%), Positives = 44/88 (49%)
Query: 51 VHITENCVRKMKELDANESSSGGKMLRLSVETGGCSGFQYAFNLDDRFNSDDRVFEKEGI 110
+ +T+ V +++ L + G LR+ V+ GGCSG+ Y L + D V ++G
Sbjct: 8 IELTDKAVAQVRHLLGSTPGHRGLRLRIGVDPGGCSGYTYKLALVPGAETGDVVLPQDGF 67
Query: 111 KLVVDNISYDFVKGATVDYVEELIRSAF 138
+VV D ++G VDY E L S F
Sbjct: 68 DVVVHTTGVDLLRGMRVDYTETLTSSGF 95
>HESB_ANASP (P18501) Protein hesB
Length = 123
Score = 55.8 bits (133), Expect = 3e-08
Identities = 27/74 (36%), Positives = 46/74 (61%), Gaps = 3/74 (4%)
Query: 65 DANESSSGGKMLRLSVETGGCSGFQYAFNLDDRFNSDDRVFEKEGIKLVVDNISYDFVKG 124
DANE++ G +R+SV+ GGCSG++Y ++ + DD V ++ + + VD S ++G
Sbjct: 23 DANETTKG---IRVSVKDGGCSGYEYLMDVTSQPQPDDLVTQQGSVLVYVDAKSAPLLEG 79
Query: 125 ATVDYVEELIRSAF 138
+D+VE L+ S F
Sbjct: 80 IVIDFVEGLVESGF 93
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.316 0.131 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,559,855
Number of Sequences: 164201
Number of extensions: 610266
Number of successful extensions: 2732
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 2642
Number of HSP's gapped (non-prelim): 90
length of query: 145
length of database: 59,974,054
effective HSP length: 100
effective length of query: 45
effective length of database: 43,553,954
effective search space: 1959927930
effective search space used: 1959927930
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Medicago: description of AC147007.11