BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147001.13 + phase: 0
(136 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
H3_GOSHI (Q71V89) Histone 3 248 4e-66
H33_ARATH (P59169) Histone H3.3 248 4e-66
H32_MEDSA (P11105) Histone H3.2, minor 248 4e-66
H31_MOUSE (P68433) Histone H3.1 240 7e-64
H31_HUMAN (P68431) Histone H3.1 (H3/a) (H3/c) (H3/d) (H3/f) (H3/... 240 7e-64
H31_BOVIN (P68432) Histone H3.1 240 7e-64
H3_URECA (P84239) Histone H3 239 1e-63
H3_TIGCA (P84237) Histone H3 239 1e-63
H3_PORAF (P84232) Histone H3 239 1e-63
H3_PLADU (P84235) Histone H3 239 1e-63
H3_ONCMY (P84234) Histone H3 239 1e-63
H3_ICTBU (P84231) Histone H3 239 1e-63
H3_DROME (P02299) Histone H3 239 1e-63
H3_DROHY (P84236) Histone H3 239 1e-63
H3_CHITH (P84238) Histone H3 (H3) 239 1e-63
H3_CAIMO (P84230) Histone H3 239 1e-63
H32_MOUSE (P84228) Histone H3.2 239 1e-63
H32_BOVIN (P84227) Histone H3.2 239 1e-63
H31_XENLA (P84233) Histone H3.1 239 1e-63
H31_CHICK (P84229) Histone H3 (Histone H3 class I) 239 1e-63
>H3_GOSHI (Q71V89) Histone 3
Length = 135
Score = 248 bits (632), Expect = 4e-66
Identities = 125/135 (92%), Positives = 130/135 (95%)
Query: 2 ARTKQTARRSTLGKAPRKQLATKAARKSVPTTGGIKKPHRYRPGTVALREIRKYQKGTEL 61
ARTKQTAR+ST GKAPRKQLATKAARKS PTTGG+KKPHRYRPGTVALREIRKYQK TEL
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTEL 60
Query: 62 LIRKLPFQRLVREIAQNFKTDLRFQSHAVLALQEAVEAYLVGLFEDTNLCAIHAKRITVM 121
LIRKLPFQRLVREIAQ+FKTDLRFQSHAVLALQEA EAYLVGLFEDTNLCAIHAKR+T+M
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIM 120
Query: 122 VKDIQLARRIRGERA 136
KDIQLARRIRGERA
Sbjct: 121 PKDIQLARRIRGERA 135
>H33_ARATH (P59169) Histone H3.3
Length = 135
Score = 248 bits (632), Expect = 4e-66
Identities = 125/135 (92%), Positives = 130/135 (95%)
Query: 2 ARTKQTARRSTLGKAPRKQLATKAARKSVPTTGGIKKPHRYRPGTVALREIRKYQKGTEL 61
ARTKQTAR+ST GKAPRKQLATKAARKS PTTGG+KKPHRYRPGTVALREIRKYQK TEL
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTEL 60
Query: 62 LIRKLPFQRLVREIAQNFKTDLRFQSHAVLALQEAVEAYLVGLFEDTNLCAIHAKRITVM 121
LIRKLPFQRLVREIAQ+FKTDLRFQSHAVLALQEA EAYLVGLFEDTNLCAIHAKR+T+M
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIM 120
Query: 122 VKDIQLARRIRGERA 136
KDIQLARRIRGERA
Sbjct: 121 PKDIQLARRIRGERA 135
>H32_MEDSA (P11105) Histone H3.2, minor
Length = 135
Score = 248 bits (632), Expect = 4e-66
Identities = 125/135 (92%), Positives = 130/135 (95%)
Query: 2 ARTKQTARRSTLGKAPRKQLATKAARKSVPTTGGIKKPHRYRPGTVALREIRKYQKGTEL 61
ARTKQTAR+ST GKAPRKQLATKAARKS PTTGG+KKPHRYRPGTVALREIRKYQK TEL
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTEL 60
Query: 62 LIRKLPFQRLVREIAQNFKTDLRFQSHAVLALQEAVEAYLVGLFEDTNLCAIHAKRITVM 121
LIRKLPFQRLVREIAQ+FKTDLRFQSHAVLALQEA EAYLVGLFEDTNLCAIHAKR+T+M
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIM 120
Query: 122 VKDIQLARRIRGERA 136
KDIQLARRIRGERA
Sbjct: 121 PKDIQLARRIRGERA 135
>H31_MOUSE (P68433) Histone H3.1
Length = 135
Score = 240 bits (612), Expect = 7e-64
Identities = 121/135 (89%), Positives = 128/135 (94%)
Query: 2 ARTKQTARRSTLGKAPRKQLATKAARKSVPTTGGIKKPHRYRPGTVALREIRKYQKGTEL 61
ARTKQTAR+ST GKAPRKQLATKAARKS P TGG+KKPHRYRPGTVALREIR+YQK TEL
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60
Query: 62 LIRKLPFQRLVREIAQNFKTDLRFQSHAVLALQEAVEAYLVGLFEDTNLCAIHAKRITVM 121
LIRKLPFQRLVREIAQ+FKTDLRFQS AV+ALQEA EAYLVGLFEDTNLCAIHAKR+T+M
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIM 120
Query: 122 VKDIQLARRIRGERA 136
KDIQLARRIRGERA
Sbjct: 121 PKDIQLARRIRGERA 135
>H31_HUMAN (P68431) Histone H3.1 (H3/a) (H3/c) (H3/d) (H3/f) (H3/h)
(H3/i) (H3/j) (H3/k) (H3/l)
Length = 135
Score = 240 bits (612), Expect = 7e-64
Identities = 121/135 (89%), Positives = 128/135 (94%)
Query: 2 ARTKQTARRSTLGKAPRKQLATKAARKSVPTTGGIKKPHRYRPGTVALREIRKYQKGTEL 61
ARTKQTAR+ST GKAPRKQLATKAARKS P TGG+KKPHRYRPGTVALREIR+YQK TEL
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60
Query: 62 LIRKLPFQRLVREIAQNFKTDLRFQSHAVLALQEAVEAYLVGLFEDTNLCAIHAKRITVM 121
LIRKLPFQRLVREIAQ+FKTDLRFQS AV+ALQEA EAYLVGLFEDTNLCAIHAKR+T+M
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIM 120
Query: 122 VKDIQLARRIRGERA 136
KDIQLARRIRGERA
Sbjct: 121 PKDIQLARRIRGERA 135
>H31_BOVIN (P68432) Histone H3.1
Length = 135
Score = 240 bits (612), Expect = 7e-64
Identities = 121/135 (89%), Positives = 128/135 (94%)
Query: 2 ARTKQTARRSTLGKAPRKQLATKAARKSVPTTGGIKKPHRYRPGTVALREIRKYQKGTEL 61
ARTKQTAR+ST GKAPRKQLATKAARKS P TGG+KKPHRYRPGTVALREIR+YQK TEL
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60
Query: 62 LIRKLPFQRLVREIAQNFKTDLRFQSHAVLALQEAVEAYLVGLFEDTNLCAIHAKRITVM 121
LIRKLPFQRLVREIAQ+FKTDLRFQS AV+ALQEA EAYLVGLFEDTNLCAIHAKR+T+M
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIM 120
Query: 122 VKDIQLARRIRGERA 136
KDIQLARRIRGERA
Sbjct: 121 PKDIQLARRIRGERA 135
>H3_URECA (P84239) Histone H3
Length = 135
Score = 239 bits (611), Expect = 1e-63
Identities = 121/135 (89%), Positives = 128/135 (94%)
Query: 2 ARTKQTARRSTLGKAPRKQLATKAARKSVPTTGGIKKPHRYRPGTVALREIRKYQKGTEL 61
ARTKQTAR+ST GKAPRKQLATKAARKS P TGG+KKPHRYRPGTVALREIR+YQK TEL
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60
Query: 62 LIRKLPFQRLVREIAQNFKTDLRFQSHAVLALQEAVEAYLVGLFEDTNLCAIHAKRITVM 121
LIRKLPFQRLVREIAQ+FKTDLRFQS AV+ALQEA EAYLVGLFEDTNLCAIHAKR+T+M
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIM 120
Query: 122 VKDIQLARRIRGERA 136
KDIQLARRIRGERA
Sbjct: 121 PKDIQLARRIRGERA 135
>H3_TIGCA (P84237) Histone H3
Length = 135
Score = 239 bits (611), Expect = 1e-63
Identities = 121/135 (89%), Positives = 128/135 (94%)
Query: 2 ARTKQTARRSTLGKAPRKQLATKAARKSVPTTGGIKKPHRYRPGTVALREIRKYQKGTEL 61
ARTKQTAR+ST GKAPRKQLATKAARKS P TGG+KKPHRYRPGTVALREIR+YQK TEL
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60
Query: 62 LIRKLPFQRLVREIAQNFKTDLRFQSHAVLALQEAVEAYLVGLFEDTNLCAIHAKRITVM 121
LIRKLPFQRLVREIAQ+FKTDLRFQS AV+ALQEA EAYLVGLFEDTNLCAIHAKR+T+M
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIM 120
Query: 122 VKDIQLARRIRGERA 136
KDIQLARRIRGERA
Sbjct: 121 PKDIQLARRIRGERA 135
>H3_PORAF (P84232) Histone H3
Length = 135
Score = 239 bits (611), Expect = 1e-63
Identities = 121/135 (89%), Positives = 128/135 (94%)
Query: 2 ARTKQTARRSTLGKAPRKQLATKAARKSVPTTGGIKKPHRYRPGTVALREIRKYQKGTEL 61
ARTKQTAR+ST GKAPRKQLATKAARKS P TGG+KKPHRYRPGTVALREIR+YQK TEL
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60
Query: 62 LIRKLPFQRLVREIAQNFKTDLRFQSHAVLALQEAVEAYLVGLFEDTNLCAIHAKRITVM 121
LIRKLPFQRLVREIAQ+FKTDLRFQS AV+ALQEA EAYLVGLFEDTNLCAIHAKR+T+M
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIM 120
Query: 122 VKDIQLARRIRGERA 136
KDIQLARRIRGERA
Sbjct: 121 PKDIQLARRIRGERA 135
>H3_PLADU (P84235) Histone H3
Length = 135
Score = 239 bits (611), Expect = 1e-63
Identities = 121/135 (89%), Positives = 128/135 (94%)
Query: 2 ARTKQTARRSTLGKAPRKQLATKAARKSVPTTGGIKKPHRYRPGTVALREIRKYQKGTEL 61
ARTKQTAR+ST GKAPRKQLATKAARKS P TGG+KKPHRYRPGTVALREIR+YQK TEL
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60
Query: 62 LIRKLPFQRLVREIAQNFKTDLRFQSHAVLALQEAVEAYLVGLFEDTNLCAIHAKRITVM 121
LIRKLPFQRLVREIAQ+FKTDLRFQS AV+ALQEA EAYLVGLFEDTNLCAIHAKR+T+M
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIM 120
Query: 122 VKDIQLARRIRGERA 136
KDIQLARRIRGERA
Sbjct: 121 PKDIQLARRIRGERA 135
>H3_ONCMY (P84234) Histone H3
Length = 135
Score = 239 bits (611), Expect = 1e-63
Identities = 121/135 (89%), Positives = 128/135 (94%)
Query: 2 ARTKQTARRSTLGKAPRKQLATKAARKSVPTTGGIKKPHRYRPGTVALREIRKYQKGTEL 61
ARTKQTAR+ST GKAPRKQLATKAARKS P TGG+KKPHRYRPGTVALREIR+YQK TEL
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60
Query: 62 LIRKLPFQRLVREIAQNFKTDLRFQSHAVLALQEAVEAYLVGLFEDTNLCAIHAKRITVM 121
LIRKLPFQRLVREIAQ+FKTDLRFQS AV+ALQEA EAYLVGLFEDTNLCAIHAKR+T+M
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIM 120
Query: 122 VKDIQLARRIRGERA 136
KDIQLARRIRGERA
Sbjct: 121 PKDIQLARRIRGERA 135
>H3_ICTBU (P84231) Histone H3
Length = 135
Score = 239 bits (611), Expect = 1e-63
Identities = 121/135 (89%), Positives = 128/135 (94%)
Query: 2 ARTKQTARRSTLGKAPRKQLATKAARKSVPTTGGIKKPHRYRPGTVALREIRKYQKGTEL 61
ARTKQTAR+ST GKAPRKQLATKAARKS P TGG+KKPHRYRPGTVALREIR+YQK TEL
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60
Query: 62 LIRKLPFQRLVREIAQNFKTDLRFQSHAVLALQEAVEAYLVGLFEDTNLCAIHAKRITVM 121
LIRKLPFQRLVREIAQ+FKTDLRFQS AV+ALQEA EAYLVGLFEDTNLCAIHAKR+T+M
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIM 120
Query: 122 VKDIQLARRIRGERA 136
KDIQLARRIRGERA
Sbjct: 121 PKDIQLARRIRGERA 135
>H3_DROME (P02299) Histone H3
Length = 135
Score = 239 bits (611), Expect = 1e-63
Identities = 121/135 (89%), Positives = 128/135 (94%)
Query: 2 ARTKQTARRSTLGKAPRKQLATKAARKSVPTTGGIKKPHRYRPGTVALREIRKYQKGTEL 61
ARTKQTAR+ST GKAPRKQLATKAARKS P TGG+KKPHRYRPGTVALREIR+YQK TEL
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60
Query: 62 LIRKLPFQRLVREIAQNFKTDLRFQSHAVLALQEAVEAYLVGLFEDTNLCAIHAKRITVM 121
LIRKLPFQRLVREIAQ+FKTDLRFQS AV+ALQEA EAYLVGLFEDTNLCAIHAKR+T+M
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIM 120
Query: 122 VKDIQLARRIRGERA 136
KDIQLARRIRGERA
Sbjct: 121 PKDIQLARRIRGERA 135
>H3_DROHY (P84236) Histone H3
Length = 135
Score = 239 bits (611), Expect = 1e-63
Identities = 121/135 (89%), Positives = 128/135 (94%)
Query: 2 ARTKQTARRSTLGKAPRKQLATKAARKSVPTTGGIKKPHRYRPGTVALREIRKYQKGTEL 61
ARTKQTAR+ST GKAPRKQLATKAARKS P TGG+KKPHRYRPGTVALREIR+YQK TEL
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60
Query: 62 LIRKLPFQRLVREIAQNFKTDLRFQSHAVLALQEAVEAYLVGLFEDTNLCAIHAKRITVM 121
LIRKLPFQRLVREIAQ+FKTDLRFQS AV+ALQEA EAYLVGLFEDTNLCAIHAKR+T+M
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIM 120
Query: 122 VKDIQLARRIRGERA 136
KDIQLARRIRGERA
Sbjct: 121 PKDIQLARRIRGERA 135
>H3_CHITH (P84238) Histone H3 (H3)
Length = 135
Score = 239 bits (611), Expect = 1e-63
Identities = 121/135 (89%), Positives = 128/135 (94%)
Query: 2 ARTKQTARRSTLGKAPRKQLATKAARKSVPTTGGIKKPHRYRPGTVALREIRKYQKGTEL 61
ARTKQTAR+ST GKAPRKQLATKAARKS P TGG+KKPHRYRPGTVALREIR+YQK TEL
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60
Query: 62 LIRKLPFQRLVREIAQNFKTDLRFQSHAVLALQEAVEAYLVGLFEDTNLCAIHAKRITVM 121
LIRKLPFQRLVREIAQ+FKTDLRFQS AV+ALQEA EAYLVGLFEDTNLCAIHAKR+T+M
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIM 120
Query: 122 VKDIQLARRIRGERA 136
KDIQLARRIRGERA
Sbjct: 121 PKDIQLARRIRGERA 135
>H3_CAIMO (P84230) Histone H3
Length = 135
Score = 239 bits (611), Expect = 1e-63
Identities = 121/135 (89%), Positives = 128/135 (94%)
Query: 2 ARTKQTARRSTLGKAPRKQLATKAARKSVPTTGGIKKPHRYRPGTVALREIRKYQKGTEL 61
ARTKQTAR+ST GKAPRKQLATKAARKS P TGG+KKPHRYRPGTVALREIR+YQK TEL
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60
Query: 62 LIRKLPFQRLVREIAQNFKTDLRFQSHAVLALQEAVEAYLVGLFEDTNLCAIHAKRITVM 121
LIRKLPFQRLVREIAQ+FKTDLRFQS AV+ALQEA EAYLVGLFEDTNLCAIHAKR+T+M
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIM 120
Query: 122 VKDIQLARRIRGERA 136
KDIQLARRIRGERA
Sbjct: 121 PKDIQLARRIRGERA 135
>H32_MOUSE (P84228) Histone H3.2
Length = 135
Score = 239 bits (611), Expect = 1e-63
Identities = 121/135 (89%), Positives = 128/135 (94%)
Query: 2 ARTKQTARRSTLGKAPRKQLATKAARKSVPTTGGIKKPHRYRPGTVALREIRKYQKGTEL 61
ARTKQTAR+ST GKAPRKQLATKAARKS P TGG+KKPHRYRPGTVALREIR+YQK TEL
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60
Query: 62 LIRKLPFQRLVREIAQNFKTDLRFQSHAVLALQEAVEAYLVGLFEDTNLCAIHAKRITVM 121
LIRKLPFQRLVREIAQ+FKTDLRFQS AV+ALQEA EAYLVGLFEDTNLCAIHAKR+T+M
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIM 120
Query: 122 VKDIQLARRIRGERA 136
KDIQLARRIRGERA
Sbjct: 121 PKDIQLARRIRGERA 135
>H32_BOVIN (P84227) Histone H3.2
Length = 135
Score = 239 bits (611), Expect = 1e-63
Identities = 121/135 (89%), Positives = 128/135 (94%)
Query: 2 ARTKQTARRSTLGKAPRKQLATKAARKSVPTTGGIKKPHRYRPGTVALREIRKYQKGTEL 61
ARTKQTAR+ST GKAPRKQLATKAARKS P TGG+KKPHRYRPGTVALREIR+YQK TEL
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60
Query: 62 LIRKLPFQRLVREIAQNFKTDLRFQSHAVLALQEAVEAYLVGLFEDTNLCAIHAKRITVM 121
LIRKLPFQRLVREIAQ+FKTDLRFQS AV+ALQEA EAYLVGLFEDTNLCAIHAKR+T+M
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIM 120
Query: 122 VKDIQLARRIRGERA 136
KDIQLARRIRGERA
Sbjct: 121 PKDIQLARRIRGERA 135
>H31_XENLA (P84233) Histone H3.1
Length = 135
Score = 239 bits (611), Expect = 1e-63
Identities = 121/135 (89%), Positives = 128/135 (94%)
Query: 2 ARTKQTARRSTLGKAPRKQLATKAARKSVPTTGGIKKPHRYRPGTVALREIRKYQKGTEL 61
ARTKQTAR+ST GKAPRKQLATKAARKS P TGG+KKPHRYRPGTVALREIR+YQK TEL
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60
Query: 62 LIRKLPFQRLVREIAQNFKTDLRFQSHAVLALQEAVEAYLVGLFEDTNLCAIHAKRITVM 121
LIRKLPFQRLVREIAQ+FKTDLRFQS AV+ALQEA EAYLVGLFEDTNLCAIHAKR+T+M
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIM 120
Query: 122 VKDIQLARRIRGERA 136
KDIQLARRIRGERA
Sbjct: 121 PKDIQLARRIRGERA 135
>H31_CHICK (P84229) Histone H3 (Histone H3 class I)
Length = 135
Score = 239 bits (611), Expect = 1e-63
Identities = 121/135 (89%), Positives = 128/135 (94%)
Query: 2 ARTKQTARRSTLGKAPRKQLATKAARKSVPTTGGIKKPHRYRPGTVALREIRKYQKGTEL 61
ARTKQTAR+ST GKAPRKQLATKAARKS P TGG+KKPHRYRPGTVALREIR+YQK TEL
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60
Query: 62 LIRKLPFQRLVREIAQNFKTDLRFQSHAVLALQEAVEAYLVGLFEDTNLCAIHAKRITVM 121
LIRKLPFQRLVREIAQ+FKTDLRFQS AV+ALQEA EAYLVGLFEDTNLCAIHAKR+T+M
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIM 120
Query: 122 VKDIQLARRIRGERA 136
KDIQLARRIRGERA
Sbjct: 121 PKDIQLARRIRGERA 135
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.323 0.135 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,642,815
Number of Sequences: 164201
Number of extensions: 475798
Number of successful extensions: 1355
Number of sequences better than 10.0: 128
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1207
Number of HSP's gapped (non-prelim): 136
length of query: 136
length of database: 59,974,054
effective HSP length: 98
effective length of query: 38
effective length of database: 43,882,356
effective search space: 1667529528
effective search space used: 1667529528
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)
Medicago: description of AC147001.13