BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146972.1 + phase: 0 /pseudo
         (594 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TRA_CORDI (P35879) Probable transposase for insertion sequence e...    32  4.7
ISPE_CHLMU (Q9PLC0) 4-diphosphocytidyl-2-C-methyl-D-erythritol k...    32  4.7
TRPP_LACLA (Q9CID5) Trehalose 6-phosphate phosphorylase (EC 2.4....    32  6.1
SUL2_MOUSE (Q8CFG0) Extracellular sulfatase Sulf-2 precursor (EC...    32  6.1
SUL2_HUMAN (Q8IWU5) Extracellular sulfatase Sulf-2 precursor (EC...    32  6.1
DPD3_HUMAN (Q15054) DNA polymerase delta subunit 3 (DNA polymera...    31  8.0
CCSA_CYACA (O19901) Cytochrome c biogenesis protein ccsA               31  8.0

>TRA_CORDI (P35879) Probable transposase for insertion sequence
           element
          Length = 343

 Score = 32.0 bits (71), Expect = 4.7
 Identities = 22/86 (25%), Positives = 40/86 (45%), Gaps = 11/86 (12%)

Query: 245 FWIDLIVSMIIQGPN*WICI*LKDHFVVYCLNWQGLIPAMQEVMPGVPHRYCVMHL*KNC 304
           FW  +   +  +G        ++D F+V C   +GL  A++   P    + C++HL +  
Sbjct: 131 FWASVCADLANRG--------VQDAFIVCCDGLKGLPEAVEATWPNSMVQTCIVHLIR-A 181

Query: 305 TKQWKNKELRRVV*ECARE--TTPTQ 328
             +W + + R+ V    RE  T PT+
Sbjct: 182 ANRWVSYQDRKPVSSALREVYTAPTE 207


>ISPE_CHLMU (Q9PLC0) 4-diphosphocytidyl-2-C-methyl-D-erythritol
           kinase (EC 2.7.1.148) (CMK)
           (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol
           kinase)
          Length = 283

 Score = 32.0 bits (71), Expect = 4.7
 Identities = 14/29 (48%), Positives = 19/29 (65%)

Query: 132 VNYEEEYNTNARFSTSIQKIICLSGGMQT 160
           V Y +    N+ ++T IQKII LSGG+ T
Sbjct: 238 VRYPKALEKNSAYATQIQKIIALSGGVST 266


>TRPP_LACLA (Q9CID5) Trehalose 6-phosphate phosphorylase (EC
           2.4.1.216) (TrePP)
          Length = 768

 Score = 31.6 bits (70), Expect = 6.1
 Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 5/64 (7%)

Query: 393 AEEIRCYVMRKMS--QNKMKLDGRAGPLCPWQQSRLEKEK---IASHNWTPLWNGDNARQ 447
           A ++  Y + +++  Q   K+DG  G + PWQ   +  E+   +  +     W  DN+R+
Sbjct: 358 ARDLLLYRINRLTAAQENAKVDGEKGAMFPWQSGLIGDEQSQFVHLNTVNNEWEPDNSRR 417

Query: 448 RYHI 451
           + H+
Sbjct: 418 QRHV 421


>SUL2_MOUSE (Q8CFG0) Extracellular sulfatase Sulf-2 precursor (EC
           3.1.6.-) (MSulf-2)
          Length = 875

 Score = 31.6 bits (70), Expect = 6.1
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 3/65 (4%)

Query: 370 VNNACEVFNSKILNYR---GHPILTMAEEIRCYVMRKMSQNKMKLDGRAGPLCPWQQSRL 426
           +++  E   +KI N R   GH      EE  C+ +   SQ+K +L  +   L P+++   
Sbjct: 636 IDHEIETLQNKIKNLREVRGHLKKKRPEECDCHKISYHSQHKGRLKHKGSSLHPFRKGLQ 695

Query: 427 EKEKI 431
           EK+K+
Sbjct: 696 EKDKV 700


>SUL2_HUMAN (Q8IWU5) Extracellular sulfatase Sulf-2 precursor (EC
           3.1.6.-) (HSulf-2)
          Length = 870

 Score = 31.6 bits (70), Expect = 6.1
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 3/65 (4%)

Query: 370 VNNACEVFNSKILNYR---GHPILTMAEEIRCYVMRKMSQNKMKLDGRAGPLCPWQQSRL 426
           +++  E   +KI N R   GH      EE  C+ +   +Q+K +L  R   L P+++   
Sbjct: 631 IDHEIETLQNKIKNLREVRGHLKKKRPEECDCHKISYHTQHKGRLKHRGSSLHPFRKGLQ 690

Query: 427 EKEKI 431
           EK+K+
Sbjct: 691 EKDKV 695


>DPD3_HUMAN (Q15054) DNA polymerase delta subunit 3 (DNA polymerase
           delta subunit p66)
          Length = 466

 Score = 31.2 bits (69), Expect = 8.0
 Identities = 12/26 (46%), Positives = 17/26 (65%)

Query: 525 EPTPYEKPVPPKVKRSAGRPKKNRRK 550
           EP P  +P PP VK S+G  K+ R++
Sbjct: 360 EPVPKTEPEPPSVKSSSGENKRKRKR 385


>CCSA_CYACA (O19901) Cytochrome c biogenesis protein ccsA
          Length = 293

 Score = 31.2 bits (69), Expect = 8.0
 Identities = 19/72 (26%), Positives = 36/72 (49%), Gaps = 4/72 (5%)

Query: 186 SLLMSLLIWRTRTTRSGFWNYSMQ---ILEIMCVMDGTLSQTCKRYEFPFKWMELYYLLI 242
           +L+ SL  W   T       +S+    ++   C++ G L + C RY + F    LY  L+
Sbjct: 20  ALVSSLFYWAKLTYYKQIQVFSLPKFCLIFSNCIIAGMLLERCFRYSY-FPLSNLYESLL 78

Query: 243 YVFWIDLIVSMI 254
           ++ W+  I+++I
Sbjct: 79  FLSWVLNIITII 90


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.350    0.154    0.574 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,492,171
Number of Sequences: 164201
Number of extensions: 2559662
Number of successful extensions: 10843
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 10840
Number of HSP's gapped (non-prelim): 7
length of query: 594
length of database: 59,974,054
effective HSP length: 116
effective length of query: 478
effective length of database: 40,926,738
effective search space: 19562980764
effective search space used: 19562980764
T: 11
A: 40
X1: 14 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.9 bits)
S2: 69 (31.2 bits)