BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146941.5 - phase: 0
(191 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
V711_ARATH (O49377) Vesicle-associated membrane protein 711 (AtV... 328 5e-90
V712_ARATH (Q9SIQ9) Vesicle-associated membrane protein 712 (AtV... 323 1e-88
V713_ARATH (Q9LFP1) Vesicle-associated membrane protein 713 (AtV... 316 2e-86
V714_ARATH (Q9FMR5) Vesicle-associated membrane protein 714 (AtV... 250 2e-66
V722_ARATH (P47192) Vesicle-associated membrane protein 722 (AtV... 147 2e-35
V725_ARATH (O48850) Vesicle-associated membrane protein 725 (AtV... 144 1e-34
V721_ARATH (Q9ZTW3) Vesicle-associated membrane protein 721 (AtV... 144 1e-34
SYBL_HUMAN (P51809) Synaptobrevin-like protein 1 142 4e-34
V727_ARATH (Q9M376) Vesicle-associated membrane protein 727 (AtV... 138 7e-33
V726_ARATH (Q9MAS5) Putative vesicle-associated membrane protein... 136 3e-32
V724_ARATH (O23429) Vesicle-associated membrane protein 724 (AtV... 135 8e-32
V723_ARATH (Q8VY69) Vesicle-associated membrane protein 723 (AtV... 110 2e-24
SC21_MOUSE (O08547) Vesicle trafficking protein SEC22b (SEC22 ve... 68 1e-11
SC21_HUMAN (O75396) Vesicle trafficking protein SEC22b (SEC22 ve... 68 1e-11
VAM4_MOUSE (O70480) Vesicle-associated membrane protein 4 (VAMP-4) 60 2e-09
VAM4_HUMAN (O75379) Vesicle-associated membrane protein 4 (VAMP-4) 60 2e-09
YK61_ARATH (Q9ZRD6) VAMP-like protein YKT61 (AtYKT61) (Geranylge... 59 5e-09
VAM8_MOUSE (O70404) Vesicle-associated membrane protein 8 (VAMP-... 59 5e-09
VAM8_HUMAN (Q9BV40) Vesicle-associated membrane protein 8 (VAMP-... 59 7e-09
VAM8_RAT (Q9WUF4) Vesicle-associated membrane protein 8 (VAMP-8)... 56 4e-08
>V711_ARATH (O49377) Vesicle-associated membrane protein 711
(AtVAMP711) (v-SNARE synaptobrevin 7C) (AtVAMP7C)
Length = 219
Score = 328 bits (841), Expect = 5e-90
Identities = 158/191 (82%), Positives = 181/191 (94%)
Query: 1 MGILYALVARGTVVLAEFTGTTTNAAAIARQILEKIPGNNDTHVSYSQDRYIFHVKRTDG 60
M ILYALVARGTVVL+EFT T+TNA+ IA+QILEK+PG+ND++VSYSQDRY+FHVKRTDG
Sbjct: 1 MAILYALVARGTVVLSEFTATSTNASTIAKQILEKVPGDNDSNVSYSQDRYVFHVKRTDG 60
Query: 61 LTVLCMADDSVGRRIPFAFLEEIHQRFVRSYGRAVLTAEAYAMNDEFSRVLNQQMEYFSS 120
LTVLCMA+++ GRRIPFAFLE+IHQRFVR+YGRAV TA AYAMN+EFSRVL+QQ++Y+S+
Sbjct: 61 LTVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRAVHTALAYAMNEEFSRVLSQQIDYYSN 120
Query: 121 DPNADRINRLKGEMSQVRNVMIENIDKVLDRGDRLELLVDKAANMQGNTFRFRKQARRFR 180
DPNADRINR+KGEM+QVR VMIENIDKVLDRG+RLELLVDK ANMQGNTFRFRKQARRFR
Sbjct: 121 DPNADRINRIKGEMNQVRGVMIENIDKVLDRGERLELLVDKTANMQGNTFRFRKQARRFR 180
Query: 181 STVWWRNVKLT 191
S VWWRN KLT
Sbjct: 181 SNVWWRNCKLT 191
>V712_ARATH (Q9SIQ9) Vesicle-associated membrane protein 712
(AtVAMP712)
Length = 219
Score = 323 bits (828), Expect = 1e-88
Identities = 154/191 (80%), Positives = 177/191 (92%)
Query: 1 MGILYALVARGTVVLAEFTGTTTNAAAIARQILEKIPGNNDTHVSYSQDRYIFHVKRTDG 60
M ILYALVARGTVVLAE + T+TNA+ IA+QILEKIPGN D+HVSYSQDRY+FHVKRTDG
Sbjct: 1 MSILYALVARGTVVLAELSTTSTNASTIAKQILEKIPGNGDSHVSYSQDRYVFHVKRTDG 60
Query: 61 LTVLCMADDSVGRRIPFAFLEEIHQRFVRSYGRAVLTAEAYAMNDEFSRVLNQQMEYFSS 120
LTVLCMAD+ GRRIPF+FLE+IHQRFVR+YGRA+ +A+AYAMNDEFSRVLNQQ+EY+S+
Sbjct: 61 LTVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRAIHSAQAYAMNDEFSRVLNQQIEYYSN 120
Query: 121 DPNADRINRLKGEMSQVRNVMIENIDKVLDRGDRLELLVDKAANMQGNTFRFRKQARRFR 180
DPNAD I+R+KGEM+QVR+VMIENID +LDRG+RLELLVDK ANMQGNTFRFRKQ RRF
Sbjct: 121 DPNADTISRIKGEMNQVRDVMIENIDNILDRGERLELLVDKTANMQGNTFRFRKQTRRFN 180
Query: 181 STVWWRNVKLT 191
+TVWWRN KLT
Sbjct: 181 NTVWWRNCKLT 191
>V713_ARATH (Q9LFP1) Vesicle-associated membrane protein 713
(AtVAMP713)
Length = 221
Score = 316 bits (809), Expect = 2e-86
Identities = 149/192 (77%), Positives = 183/192 (94%), Gaps = 1/192 (0%)
Query: 1 MGILYALVARGTVVLAEFTGTTTNAAAIARQILEKIPGNN-DTHVSYSQDRYIFHVKRTD 59
M I++ALVARGTVVL+EF+ T+TNA++I++QILEK+PGN+ D+H+SYSQDRYIFHVKRTD
Sbjct: 1 MAIIFALVARGTVVLSEFSATSTNASSISKQILEKLPGNDSDSHMSYSQDRYIFHVKRTD 60
Query: 60 GLTVLCMADDSVGRRIPFAFLEEIHQRFVRSYGRAVLTAEAYAMNDEFSRVLNQQMEYFS 119
GLTVLCMAD++ GR IPFAFL++IHQRFV++YGRA+ +A+AY+MNDEFSRVL+QQME++S
Sbjct: 61 GLTVLCMADETAGRNIPFAFLDDIHQRFVKTYGRAIHSAQAYSMNDEFSRVLSQQMEFYS 120
Query: 120 SDPNADRINRLKGEMSQVRNVMIENIDKVLDRGDRLELLVDKAANMQGNTFRFRKQARRF 179
+DPNADR++R+KGEMSQVRNVMIENIDKVLDRG+RLELLVDK NMQGNTFRFRKQARR+
Sbjct: 121 NDPNADRMSRIKGEMSQVRNVMIENIDKVLDRGERLELLVDKTENMQGNTFRFRKQARRY 180
Query: 180 RSTVWWRNVKLT 191
R+ +WWRNVKLT
Sbjct: 181 RTIMWWRNVKLT 192
>V714_ARATH (Q9FMR5) Vesicle-associated membrane protein 714
(AtVAMP714)
Length = 221
Score = 250 bits (638), Expect = 2e-66
Identities = 115/191 (60%), Positives = 158/191 (82%), Gaps = 1/191 (0%)
Query: 1 MGILYALVARGTVVLAEFTGTTTNAAAIARQILEKI-PGNNDTHVSYSQDRYIFHVKRTD 59
M I+YA+VARGTVVLAEF+ T N A+ R+ILEK+ P +D + +SQDRYIFH+ R+D
Sbjct: 1 MAIVYAVVARGTVVLAEFSAVTGNTGAVVRRILEKLSPEISDERLCFSQDRYIFHILRSD 60
Query: 60 GLTVLCMADDSVGRRIPFAFLEEIHQRFVRSYGRAVLTAEAYAMNDEFSRVLNQQMEYFS 119
GLT LCMA+D+ GRR+PF++LEEIH RF+++YG+ A AYAMNDEFSRVL+QQME+FS
Sbjct: 61 GLTFLCMANDTFGRRVPFSYLEEIHMRFMKNYGKVAHNAPAYAMNDEFSRVLHQQMEFFS 120
Query: 120 SDPNADRINRLKGEMSQVRNVMIENIDKVLDRGDRLELLVDKAANMQGNTFRFRKQARRF 179
S+P+ D +NR++GE+S++R+VM+ENI+K+++RGDR+ELLVDK A MQ ++F FRKQ++R
Sbjct: 121 SNPSVDTLNRVRGEVSEIRSVMVENIEKIMERGDRIELLVDKTATMQDSSFHFRKQSKRL 180
Query: 180 RSTVWWRNVKL 190
R +W +N KL
Sbjct: 181 RRALWMKNAKL 191
>V722_ARATH (P47192) Vesicle-associated membrane protein 722
(AtVAMP722) (Synaptobrevin-related protein 1)
Length = 221
Score = 147 bits (370), Expect = 2e-35
Identities = 76/190 (40%), Positives = 122/190 (64%), Gaps = 3/190 (1%)
Query: 3 ILYALVARGTVVLAEFTGTTTNAAAIARQILEKIPGNNDTHVSYSQDRYIFHVKRTDGLT 62
++Y+ VARGTV+L EFT N +IA Q L+K+P +N+ +Y+ D + F+ +G T
Sbjct: 6 LIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKF-TYNCDGHTFNYLVENGFT 64
Query: 63 VLCMADDSVGRRIPFAFLEEIHQRFVRSYGRA-VLTAEAYAMNDEFSRVLNQQMEYFSSD 121
+A DS GR+IP AFLE + + F + YG TA+A ++N EF L + M+Y
Sbjct: 65 YCVVAVDSAGRQIPMAFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDH 124
Query: 122 PNA-DRINRLKGEMSQVRNVMIENIDKVLDRGDRLELLVDKAANMQGNTFRFRKQARRFR 180
P+ ++ ++K ++S+V+ VM+ENI+KVLDRG+++ELLVDK N++ FR Q + R
Sbjct: 125 PDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTQMR 184
Query: 181 STVWWRNVKL 190
+W++N+K+
Sbjct: 185 RKMWFQNMKI 194
>V725_ARATH (O48850) Vesicle-associated membrane protein 725
(AtVAMP725)
Length = 220
Score = 144 bits (363), Expect = 1e-34
Identities = 74/190 (38%), Positives = 122/190 (63%), Gaps = 3/190 (1%)
Query: 3 ILYALVARGTVVLAEFTGTTTNAAAIARQILEKIPGNNDTHVSYSQDRYIFHVKRTDGLT 62
++Y+ VARGTV+L E+T N A+A Q L+K+P +N+ +Y+ D + F+ +G T
Sbjct: 6 LIYSFVARGTVILVEYTEFKGNFTAVAAQCLQKLPSSNNKF-TYNCDGHTFNYLVENGFT 64
Query: 63 VLCMADDSVGRRIPFAFLEEIHQRFVRSYGRA-VLTAEAYAMNDEFSRVLNQQMEYFSSD 121
+A +SVGR+IP AFLE + + F + YG TA+A ++N EF L + M+Y
Sbjct: 65 YCVVAVESVGRQIPMAFLERVKEDFNKRYGGGKATTAQANSLNREFGSKLKEHMQYCVDH 124
Query: 122 PNA-DRINRLKGEMSQVRNVMIENIDKVLDRGDRLELLVDKAANMQGNTFRFRKQARRFR 180
P+ ++ ++K ++++V+ VM+ENI+KVLDRG+++ELLVDK N++ FR Q + R
Sbjct: 125 PDEISKLAKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKIR 184
Query: 181 STVWWRNVKL 190
+W+ N+K+
Sbjct: 185 RKMWFENMKI 194
>V721_ARATH (Q9ZTW3) Vesicle-associated membrane protein 721
(AtVAMP721) (v-SNARE synaptobrevin 7B) (AtVAMP7B)
Length = 219
Score = 144 bits (363), Expect = 1e-34
Identities = 75/190 (39%), Positives = 120/190 (62%), Gaps = 3/190 (1%)
Query: 3 ILYALVARGTVVLAEFTGTTTNAAAIARQILEKIPGNNDTHVSYSQDRYIFHVKRTDGLT 62
++Y+ VARGTV+L EFT N +IA Q L+K+P +N+ +Y+ D + F+ DG T
Sbjct: 6 LIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKF-TYNCDGHTFNYLVEDGFT 64
Query: 63 VLCMADDSVGRRIPFAFLEEIHQRFVRSYGRA-VLTAEAYAMNDEFSRVLNQQMEYFSSD 121
+A DS GR+IP +FLE + + F + YG TA+A ++N EF L + M+Y
Sbjct: 65 YCVVAVDSAGRQIPMSFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDH 124
Query: 122 PNA-DRINRLKGEMSQVRNVMIENIDKVLDRGDRLELLVDKAANMQGNTFRFRKQARRFR 180
P+ ++ ++K ++S+V+ VM+ENI+KVLDRG+++ELLVDK N++ FR + R
Sbjct: 125 PDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTTGTQMR 184
Query: 181 STVWWRNVKL 190
+W +N+K+
Sbjct: 185 RKMWLQNMKI 194
>SYBL_HUMAN (P51809) Synaptobrevin-like protein 1
Length = 220
Score = 142 bits (359), Expect = 4e-34
Identities = 74/191 (38%), Positives = 111/191 (57%), Gaps = 1/191 (0%)
Query: 1 MGILYALVARGTVVLAEFTGTTTNAAAIARQILEKIPGNNDTHVSYSQDRYIFHVKRTDG 60
M IL+A+VARGT +LA+ N + QIL KIP N+ ++YS Y+FH D
Sbjct: 1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNK-LTYSHGNYLFHYICQDR 59
Query: 61 LTVLCMADDSVGRRIPFAFLEEIHQRFVRSYGRAVLTAEAYAMNDEFSRVLNQQMEYFSS 120
+ LC+ DD R F FL EI +RF +YG TA YAMN EFS VL Q+++ S
Sbjct: 60 IVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSE 119
Query: 121 DPNADRINRLKGEMSQVRNVMIENIDKVLDRGDRLELLVDKAANMQGNTFRFRKQARRFR 180
+ D++ + ++ +++ +M+ NID V RG+RLELL+DK N+ ++ F+ +R
Sbjct: 120 NKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLA 179
Query: 181 STVWWRNVKLT 191
+ +N+KLT
Sbjct: 180 RAMCMKNLKLT 190
>V727_ARATH (Q9M376) Vesicle-associated membrane protein 727
(AtVAMP727)
Length = 240
Score = 138 bits (348), Expect = 7e-33
Identities = 73/210 (34%), Positives = 126/210 (59%), Gaps = 22/210 (10%)
Query: 2 GILYALVARGTVVLAEFTGTTTNAAAIARQILEKIPGNNDTHVSYSQDRYIFHVKRTDGL 61
G++Y+ VA+GTVVLAE T + N + IA Q L+K+P N+ + +YS D + F+ +G
Sbjct: 5 GLIYSFVAKGTVVLAEHTPYSGNFSTIAVQCLQKLPTNSSKY-TYSCDGHTFNFLVDNGF 63
Query: 62 TVLCMADDSVGRRIPFAFLEEIHQRFVRSYGRAVLTAE--------------------AY 101
L +AD+S GR +PF FLE + + F + Y ++ E AY
Sbjct: 64 VFLVVADESTGRSVPFVFLERVKEDFKKRYEASIKNDERHPLADEDEDDDLFGDRFSVAY 123
Query: 102 AMNDEFSRVLNQQMEYFSSDPNA-DRINRLKGEMSQVRNVMIENIDKVLDRGDRLELLVD 160
++ EF +L + M+Y S P ++++LK ++++V+ +M++NI+KVLDRG+++ELLVD
Sbjct: 124 NLDREFGPILKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIELLVD 183
Query: 161 KAANMQGNTFRFRKQARRFRSTVWWRNVKL 190
K N+Q F++Q R+ R +W +++++
Sbjct: 184 KTENLQFQADSFQRQGRQLRRKMWLQSLQM 213
>V726_ARATH (Q9MAS5) Putative vesicle-associated membrane protein
726 (AtVAMP726)
Length = 229
Score = 136 bits (343), Expect = 3e-32
Identities = 73/199 (36%), Positives = 125/199 (62%), Gaps = 12/199 (6%)
Query: 3 ILYALVARGTVVLAEFTGTTTNAAAIARQILEKIPGNNDTHVSYSQDRYIFHVKRTDGLT 62
++Y+ VARGTV+LAE+T N ++A Q L+K+P +N+ +Y+ D + F+ +G T
Sbjct: 6 LIYSFVARGTVILAEYTEFKGNFTSVAAQCLQKLPSSNNKF-TYNCDGHTFNYLADNGFT 64
Query: 63 VLCMADDSVGRRIPFAFLEEIHQRFVRSYGRA-VLTAEAYAMNDEFSRVLNQQMEYFSSD 121
+ +S GR+IP AFLE + + F + YG TA+A ++N EF L + M+Y +
Sbjct: 65 YCVVVIESAGRQIPMAFLERVKEDFNKRYGGGKASTAKANSLNKEFGSKLKEHMQYCADH 124
Query: 122 PNA-DRINRLKGEMSQVRNVMIENIDKVLDRGDRLELLVDKAANMQ--------GNTFR- 171
P +++++K ++++V+ VM+ENI+KVLDRG+++ELLVDK N++ NT +
Sbjct: 125 PEEISKLSKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQVNNNHISNTAQD 184
Query: 172 FRKQARRFRSTVWWRNVKL 190
FR Q + + +W+ N+K+
Sbjct: 185 FRTQGTKMKRKLWFENMKI 203
>V724_ARATH (O23429) Vesicle-associated membrane protein 724
(AtVAMP724) (SYBL1-like protein)
Length = 222
Score = 135 bits (339), Expect = 8e-32
Identities = 66/189 (34%), Positives = 117/189 (60%), Gaps = 2/189 (1%)
Query: 4 LYALVARGTVVLAEFTGTTTNAAAIARQILEKIPGNNDTHVSYSQDRYIFHVKRTDGLTV 63
+Y+ VARGT++LAE+T T N +IA Q L+K+P ++++ +Y+ D + F+ DG
Sbjct: 7 IYSFVARGTMILAEYTEFTGNFPSIAAQCLQKLPSSSNSKFTYNCDHHTFNFLVEDGYAY 66
Query: 64 LCMADDSVGRRIPFAFLEEIHQRFVRSYGRA-VLTAEAYAMNDEFSRVLNQQMEYF-SSD 121
+A DS+ ++I AFLE + F + YG TA A ++N EF V+ + M Y
Sbjct: 67 CVVAKDSLSKQISIAFLERVKADFKKRYGGGKASTAIAKSLNKEFGPVMKEHMNYIVDHA 126
Query: 122 PNADRINRLKGEMSQVRNVMIENIDKVLDRGDRLELLVDKAANMQGNTFRFRKQARRFRS 181
+++ ++K ++S+V+++M+ENIDK +DRG+ L +L DK N++ ++KQ + R
Sbjct: 127 EEIEKLIKVKAQVSEVKSIMLENIDKAIDRGENLTVLTDKTENLRSQAQEYKKQGTQVRR 186
Query: 182 TVWWRNVKL 190
+W++N+K+
Sbjct: 187 KLWYQNMKI 195
>V723_ARATH (Q8VY69) Vesicle-associated membrane protein 723
(AtVAMP723)
Length = 217
Score = 110 bits (276), Expect = 2e-24
Identities = 66/190 (34%), Positives = 109/190 (56%), Gaps = 7/190 (3%)
Query: 3 ILYALVARGTVVLAEFTGTTTNAAAIARQILEKIPGNNDTHVSYSQDRYIFHVKRTDGLT 62
+ Y+ +ARGTV+L EFT N ++A Q LE +P +N+ +Y+ D + F+ +G T
Sbjct: 6 LFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPSSNN-KFTYNCDGHTFNDLVENGFT 64
Query: 63 VLCMADDSVGRRIPFAFLEEIHQRFVRSY-GRAVLTAEAYAMNDEFSRVLNQQMEYFSSD 121
+A DS GR IP AFLE + + F + Y G T +A ++N EF L + M+Y
Sbjct: 65 YCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQANSLNKEFGSNLKEHMQYCMDH 124
Query: 122 PN-ADRINRLKGEMSQVRNVMIENIDKVLDRGDRLELLVDKAANMQGNTFRFRKQARRFR 180
P+ + + K ++S+V+++M+ENI+KVL RG E+L + Q + R Q +R +
Sbjct: 125 PDEISNLAKAKAQVSEVKSLMMENIEKVLARGVICEMLGSSESQPQAFYIK-RTQMKRKK 183
Query: 181 STVWWRNVKL 190
W++N+K+
Sbjct: 184 ---WFQNMKI 190
>SC21_MOUSE (O08547) Vesicle trafficking protein SEC22b (SEC22
vesicle trafficking protein-like 1)
Length = 215
Score = 68.2 bits (165), Expect = 1e-11
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 2/156 (1%)
Query: 29 ARQILEKIPGNNDTHVSYSQDRYIFHVKRTDGLTVLCMADDSVGRRIPFAFLEEIHQRFV 88
A+Q+ K+ + T + FH G+ L + + + +++ FA+LE++H F
Sbjct: 37 AKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFD 96
Query: 89 RSYGRAVLTAEAYAMNDEFSRVLNQQMEYFSSDPNADRINRLKGEMSQVRNVMIENIDKV 148
+G+ V T EF + + + + + + E+ V+ +M+ NI++V
Sbjct: 97 EQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEV 156
Query: 149 LDRGDRLELLVDKAANMQGNTFRFRKQAR--RFRST 182
L RG+ L L KA N+ + ++R+ A+ RST
Sbjct: 157 LQRGEALSALDSKANNLSSLSKKYRQDAKYLNMRST 192
>SC21_HUMAN (O75396) Vesicle trafficking protein SEC22b (SEC22
vesicle trafficking protein-like 1)
Length = 215
Score = 68.2 bits (165), Expect = 1e-11
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 2/156 (1%)
Query: 29 ARQILEKIPGNNDTHVSYSQDRYIFHVKRTDGLTVLCMADDSVGRRIPFAFLEEIHQRFV 88
A+Q+ K+ + T + FH G+ L + + + +++ FA+LE++H F
Sbjct: 37 AKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFD 96
Query: 89 RSYGRAVLTAEAYAMNDEFSRVLNQQMEYFSSDPNADRINRLKGEMSQVRNVMIENIDKV 148
+G+ V T EF + + + + + + E+ V+ +M+ NI++V
Sbjct: 97 EQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEV 156
Query: 149 LDRGDRLELLVDKAANMQGNTFRFRKQAR--RFRST 182
L RG+ L L KA N+ + ++R+ A+ RST
Sbjct: 157 LQRGEALSALDSKANNLSSLSKKYRQDAKYLNMRST 192
>VAM4_MOUSE (O70480) Vesicle-associated membrane protein 4 (VAMP-4)
Length = 141
Score = 60.5 bits (145), Expect = 2e-09
Identities = 25/69 (36%), Positives = 45/69 (64%)
Query: 122 PNADRINRLKGEMSQVRNVMIENIDKVLDRGDRLELLVDKAANMQGNTFRFRKQARRFRS 181
P D+I ++ ++ +V +VM ENI KV++RG+RL+ L DK+ ++ N F ++++ R
Sbjct: 48 PRNDKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSKQLRR 107
Query: 182 TVWWRNVKL 190
+WWR K+
Sbjct: 108 QMWWRGCKI 116
>VAM4_HUMAN (O75379) Vesicle-associated membrane protein 4 (VAMP-4)
Length = 141
Score = 60.5 bits (145), Expect = 2e-09
Identities = 25/69 (36%), Positives = 45/69 (64%)
Query: 122 PNADRINRLKGEMSQVRNVMIENIDKVLDRGDRLELLVDKAANMQGNTFRFRKQARRFRS 181
P D+I ++ ++ +V +VM ENI KV++RG+RL+ L DK+ ++ N F ++++ R
Sbjct: 48 PRNDKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSKQLRR 107
Query: 182 TVWWRNVKL 190
+WWR K+
Sbjct: 108 QMWWRGCKI 116
>YK61_ARATH (Q9ZRD6) VAMP-like protein YKT61 (AtYKT61)
(Geranylgeranylated protein 1) (AtGP1)
Length = 199
Score = 59.3 bits (142), Expect = 5e-09
Identities = 35/154 (22%), Positives = 79/154 (50%), Gaps = 4/154 (2%)
Query: 28 IARQILEKIPGNNDTHVSYSQDRYIFHVKRTDGLTVLCMADDSVGRRIPFAFLEEIHQRF 87
+ R + + P + V + + Y H +GL + DD R F+ L ++ +
Sbjct: 45 VGRTVASRTPPSQRQSVQHEE--YKVHAYNRNGLCAVGFMDDHYPVRSAFSLLNQVLDEY 102
Query: 88 VRSYGRAVLTAEAYAMNDEFSRVLNQQMEYFSSDPNADRINRLKGEMSQVRNVMIENIDK 147
+S+G + +A+ + ++ L + + F AD++ +++ E+ + + ++ + ID
Sbjct: 103 QKSFGESWRSAKEDS--NQPWPYLTEALNKFQDPAEADKLLKIQRELDETKIILHKTIDS 160
Query: 148 VLDRGDRLELLVDKAANMQGNTFRFRKQARRFRS 181
VL RG++L+ LV+K++++ + F KQA++ S
Sbjct: 161 VLARGEKLDSLVEKSSDLSMASQMFYKQAKKTNS 194
>VAM8_MOUSE (O70404) Vesicle-associated membrane protein 8 (VAMP-8)
(Endobrevin) (Edb)
Length = 101
Score = 59.3 bits (142), Expect = 5e-09
Identities = 23/76 (30%), Positives = 46/76 (60%)
Query: 115 MEYFSSDPNADRINRLKGEMSQVRNVMIENIDKVLDRGDRLELLVDKAANMQGNTFRFRK 174
ME S DR+ L+ E+ V+N+M +N++++L RG+ L+ L +K +++ + F+
Sbjct: 1 MEEASGSAGNDRVRNLQSEVEGVKNIMTQNVERILSRGENLDHLRNKTEDLEATSEHFKT 60
Query: 175 QARRFRSTVWWRNVKL 190
+++ WW+NVK+
Sbjct: 61 TSQKVARKFWWKNVKM 76
>VAM8_HUMAN (Q9BV40) Vesicle-associated membrane protein 8 (VAMP-8)
(Endobrevin) (EDB)
Length = 100
Score = 58.9 bits (141), Expect = 7e-09
Identities = 24/76 (31%), Positives = 46/76 (59%)
Query: 115 MEYFSSDPNADRINRLKGEMSQVRNVMIENIDKVLDRGDRLELLVDKAANMQGNTFRFRK 174
ME S DR+ L+ E+ V+N+M +N++++L RG+ LE L +K +++ + F+
Sbjct: 1 MEEASEGGGNDRVRNLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKT 60
Query: 175 QARRFRSTVWWRNVKL 190
+++ WW+NVK+
Sbjct: 61 TSQKVARKFWWKNVKM 76
>VAM8_RAT (Q9WUF4) Vesicle-associated membrane protein 8 (VAMP-8)
(Endobrevin) (EDB)
Length = 100
Score = 56.2 bits (134), Expect = 4e-08
Identities = 21/72 (29%), Positives = 44/72 (60%)
Query: 119 SSDPNADRINRLKGEMSQVRNVMIENIDKVLDRGDRLELLVDKAANMQGNTFRFRKQARR 178
S DR+ L+ E+ V+N+M +N++++L RG+ L+ L +K +++ + F+ +++
Sbjct: 4 SGSAGNDRVRNLQSEVEGVKNIMTQNVERILARGENLDHLRNKTEDLEATSEHFKTTSQK 63
Query: 179 FRSTVWWRNVKL 190
WW+NVK+
Sbjct: 64 VARKFWWKNVKM 75
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.324 0.136 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,139,631
Number of Sequences: 164201
Number of extensions: 765644
Number of successful extensions: 2710
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2619
Number of HSP's gapped (non-prelim): 73
length of query: 191
length of database: 59,974,054
effective HSP length: 104
effective length of query: 87
effective length of database: 42,897,150
effective search space: 3732052050
effective search space used: 3732052050
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 62 (28.5 bits)
Medicago: description of AC146941.5