BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146941.15 - phase: 0 
         (688 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

YG4B_YEAST (P46951) Hypothetical 95.4 kDa protein in SNG1-PMT6 i...    38  0.10
TRA5_LACLA (P35881) Transposase for insertion sequence element I...    34  1.5
P37_MYCPN (P75371) High affinity transport system protein p37 pr...    33  1.9
DOC9_MOUSE (Q8BIK4) Dedicator of cytokinesis protein 9 (Cdc42 gu...    33  3.3
TRP1_RAT (Q9QX01) Short transient receptor potential channel 1 (...    31  9.5
K2C1_MOUSE (P04104) Keratin, type II cytoskeletal 1 (Cytokeratin...    31  9.5
BCDP_HUMAN (Q9BYV7) Beta,beta-carotene 9',10'-dioxygenase (EC 1....    31  9.5

>YG4B_YEAST (P46951) Hypothetical 95.4 kDa protein in SNG1-PMT6
           intergenic region
          Length = 817

 Score = 37.7 bits (86), Expect = 0.10
 Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 12/121 (9%)

Query: 382 LQQNDWLSGLYEERHRWAPTFVRKYFWAGMSTTQRSESMHAFFDGYINST----TSLNQF 437
           ++ ND    L++  HR   +F+  Y +  +  + +++S+   FD Y N+     TSLN F
Sbjct: 344 VKYNDKYYQLHDNSHRDIISFIDAYSFI-LQNSSKTDSIENVFD-YDNTVSTFATSLNSF 401

Query: 438 VKQYDNALSSRAEKEFEADFNSLDTTIPCVSNSSIEKQLQGEY-THAKFKEVQAEFISKM 496
            K+Y+  L S++E       + L+ +  CV   +I K L   + T  + ++ Q +F+   
Sbjct: 402 YKEYNLPLMSQSE-----SLDWLENSTRCVYPGNISKVLTNAWSTLYEIRKYQLDFLVSN 456

Query: 497 N 497
           N
Sbjct: 457 N 457


>TRA5_LACLA (P35881) Transposase for insertion sequence element
           IS905
          Length = 391

 Score = 33.9 bits (76), Expect = 1.5
 Identities = 19/80 (23%), Positives = 37/80 (45%), Gaps = 1/80 (1%)

Query: 264 VGVNHHGQSTLLGCGLLSGEDTESFVWLFKSWLRCMLGKAPVGIVTDQCKAVQNAIELVF 323
           +G+   GQ  +LG  +   E+  S+  L        + +  + +VTD  K ++  I   +
Sbjct: 183 LGITPEGQKAVLGYEIAPNENNASWSTLLDKLQNQGIQQVSL-VVTDGFKGLEQIISQAY 241

Query: 324 PTTRHRWCLWHIMKKIPEKL 343
           P  + + CL HI + +  K+
Sbjct: 242 PLAKQQRCLIHISRNLASKV 261


>P37_MYCPN (P75371) High affinity transport system protein p37
           precursor
          Length = 380

 Score = 33.5 bits (75), Expect = 1.9
 Identities = 18/61 (29%), Positives = 32/61 (51%), Gaps = 2/61 (3%)

Query: 416 RSESMHAFFDGYIN--STTSLNQFVKQYDNALSSRAEKEFEADFNSLDTTIPCVSNSSIE 473
           R ES H  F+  ++  +  S+++F + Y N LS + +K+    FN +D +   +SN    
Sbjct: 29  RRESNHLIFNISLDHDADASISKFFELYSNNLSKKLDKKVTVSFNIIDDSFTKISNIQTA 88

Query: 474 K 474
           K
Sbjct: 89  K 89


>DOC9_MOUSE (Q8BIK4) Dedicator of cytokinesis protein 9 (Cdc42
           guanine nucleotide exchange factor zizimin 1)
          Length = 2055

 Score = 32.7 bits (73), Expect = 3.3
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 11/68 (16%)

Query: 596 RELKPKMDRFDKLCKHFYEIAEVAAESEDATKALHETLHQFNSNKDGITDIVNRSFIDDS 655
           R+L  K+ + DKL  H YE+ E A + EDA            S K GIT      ++   
Sbjct: 147 RQLPNKVPKLDKLPVHVYEVDEEADKDEDAA--------SLGSQKGGIT---KHGWLYKG 195

Query: 656 NPNNGIGI 663
           N N+ I +
Sbjct: 196 NMNSAISV 203


>TRP1_RAT (Q9QX01) Short transient receptor potential channel 1
           (TrpC1) (TRP-1 protein) (Trp1)
          Length = 759

 Score = 31.2 bits (69), Expect = 9.5
 Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 2/83 (2%)

Query: 423 FFDGYINSTTSLNQFVKQYDNALSSRAEKEFEADFNSLDTTIPCVSNSSIEKQLQGEYTH 482
           F++ Y         F K  D    +R  +E E   N   +  P      +E+++      
Sbjct: 220 FWNDYEELARQCKMFAK--DLLAQARNSRELEVILNHTSSDEPLDKRGLLEERMNLSRLK 277

Query: 483 AKFKEVQAEFISKMNCAPSLNVV 505
              K  Q EF+S+ NC   LN V
Sbjct: 278 LAIKYNQKEFVSQSNCQQFLNTV 300


>K2C1_MOUSE (P04104) Keratin, type II cytoskeletal 1 (Cytokeratin 1)
           (67 kDa cytokeratin)
          Length = 627

 Score = 31.2 bits (69), Expect = 9.5
 Identities = 57/291 (19%), Positives = 117/291 (39%), Gaps = 44/291 (15%)

Query: 371 EKWCSFIDK--FMLQQNDWLSGLYEERHRWAPTFVRKYFWAGMSTTQRSESMHAFFDGYI 428
           +K+ SFIDK  F+ QQN  L   +E   +             + TT R++++  FF+ YI
Sbjct: 196 DKFASFIDKVRFLEQQNKVLQTKWELLQQ-------------VDTTTRTQNLDPFFENYI 242

Query: 429 NSTTSLNQFVKQYDNALSSRAEKEFE-ADFNSLDTTIPCVSNSSIEKQLQGEYTHAKF-K 486
           +         ++ D+  S ++  E E  +   L           I K+   E       K
Sbjct: 243 SILR------RKVDSLKSDQSRMESELKNMQDLVEEYRTKYEDEINKRTNAENEFVTIKK 296

Query: 487 EVQAEFISKMNCAPSLNVVE---GCFATYHVLEEVVVGGRHKENVFKVVFNQENQDFSCE 543
           +V + +++K+      + ++     F+T + +E   +  +  E    VV + +N      
Sbjct: 297 DVDSAYMTKVELQAKRDALQQDINFFSTLYQMEMSQMQTQISET--NVVLSMDNN----- 349

Query: 544 CSLFEFRGILC---CHVLSVCTRERV------KNVPEKYVLTRWKKNIKRKHSYIKSSYC 594
              F+  GI+        S+C R +       ++  E+  +T  K     +++ ++ S  
Sbjct: 350 -RQFDLDGIISEVKAQYDSICQRSKAEAETFYQSKYEELQITAGKHGDSVRNTKMEISEL 408

Query: 595 ARELKPKMDRFDKLCKHFYEIAEVAAESED-ATKALHETLHQFNSNKDGIT 644
            R ++      D   K   +I +   ++E    KAL +  ++ N  +D ++
Sbjct: 409 NRMIQRLRSEIDGCKKQISQIQQNINDAEQRGEKALKDAQNKLNEIEDALS 459


>BCDP_HUMAN (Q9BYV7) Beta,beta-carotene 9',10'-dioxygenase (EC
           1.14.99.-) (Beta-carotene dioxygenase 2) (B-diox-II)
          Length = 556

 Score = 31.2 bits (69), Expect = 9.5
 Identities = 35/146 (23%), Positives = 61/146 (40%), Gaps = 24/146 (16%)

Query: 508 CFATYHVLEE---VVVGGRHKENVFKVVFNQENQDFSCECSLFEFRGILCCHVLSVCTRE 564
           C   +HV+E+    ++ GR+    F V F+Q N         FE +G   C ++ +C ++
Sbjct: 306 CNTRFHVVEKRTGQLLPGRYYSKPF-VTFHQINA--------FEDQG---CVIIDLCCQD 353

Query: 565 RVKNVPEKYVLTRWKK---NIKRKHSYIKSSYCARELKP-----KMDRFDKLCKHFYEIA 616
             + + E Y L   +K    + + H+    S+  R + P          D L    Y  A
Sbjct: 354 NGRTL-EVYQLQNLRKAGEGLDQVHNSAAKSFPRRFVLPLNVSLNAPEGDNLSPLSYTSA 412

Query: 617 EVAAESEDATKALHETLHQFNSNKDG 642
               +++      HE LHQ +  K+G
Sbjct: 413 SAVKQADGTIWCSHENLHQEDLEKEG 438


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.319    0.134    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,251,935
Number of Sequences: 164201
Number of extensions: 3720907
Number of successful extensions: 8453
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 8452
Number of HSP's gapped (non-prelim): 8
length of query: 688
length of database: 59,974,054
effective HSP length: 117
effective length of query: 571
effective length of database: 40,762,537
effective search space: 23275408627
effective search space used: 23275408627
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)