BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146914.1 + phase: 0 /pseudo
(369 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
VE2_HPV14 (P36783) Regulatory protein E2 91 4e-18
VE2_HPV20 (P50766) Regulatory protein E2 78 3e-14
MOG5_CAEEL (Q09530) Probable pre-mRNA splicing factor ATP-depend... 77 5e-14
RU17_XENLA (P09406) U1 small nuclear ribonucleoprotein 70 kDa (U... 76 2e-13
L7L2_MOUSE (Q7TNC4) Putative RNA-binding protein Luc7-like 2 (CG... 73 1e-12
L7L2_HUMAN (Q9Y383) Putative RNA-binding protein Luc7-like 2 (CG... 73 1e-12
CTF8_HUMAN (Q96D72) Protein C20orf158 73 1e-12
SON_HUMAN (P18583) SON protein (SON3) (Negative regulatory eleme... 72 2e-12
SFR4_MOUSE (Q8VE97) Splicing factor, arginine/serine-rich 4 70 7e-12
RU17_ARATH (Q42404) U1 small nuclear ribonucleoprotein 70 kDa (U... 70 1e-11
T2_MOUSE (Q06666) Octapeptide-repeat protein T2 69 1e-11
SON_MOUSE (Q9QX47) SON protein 69 1e-11
SFR6_HUMAN (Q13247) Splicing factor, arginine/serine-rich 6 (Pre... 69 1e-11
SFRC_MOUSE (Q8BZX4) Splicing factor, arginine/serine-rich 12 (Se... 69 2e-11
SFR4_HUMAN (Q08170) Splicing factor, arginine/serine-rich 4 (Pre... 69 2e-11
PPIG_RAT (O55035) Peptidyl-prolyl cis-trans isomerase G (EC 5.2.... 69 2e-11
U2AF_CAEBR (P90727) Splicing factor U2AF 65 kDa subunit (U2 auxi... 68 3e-11
STC_DROME (P40798) Shuttle craft protein 68 4e-11
PPIG_HUMAN (Q13427) Peptidyl-prolyl cis-trans isomerase G (EC 5.... 68 4e-11
SFRC_HUMAN (Q8WXA9) Splicing factor, arginine/serine-rich 12 (Se... 67 6e-11
>VE2_HPV14 (P36783) Regulatory protein E2
Length = 483
Score = 91.3 bits (225), Expect = 4e-18
Identities = 73/210 (34%), Positives = 99/210 (46%), Gaps = 22/210 (10%)
Query: 9 YYDELTR---KGEGAAKFKQGLGFSTSTSNDAVPKPGSSLVSSSSFLSQFVKASSSSTTT 65
+ D+ TR G K + F+ TS+ PG S++S S + TT
Sbjct: 172 FADDATRYSKTGHWEVKVNKETVFTPVTSSTPPESPGGQADSNTS--------SKTPTTA 223
Query: 66 TASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRER 125
T ST+ S +D + Q Q K ++ R S +T R +R R + +SRSRSR R
Sbjct: 224 TDSTSRLSPADSRKQSQQANTKGRRYGR---RPSSRTRRTTETRQRRRSRSKSRSRSRSR 280
Query: 126 YRDRDSRRRSRSRERNSRYSDRDRDRDRD------SGRSRSRSDSDVDRGRDRRKRERGR 179
R R SR RS+S ER SRY R R R ++ + R R R S R +R R RGR
Sbjct: 281 SRLR-SRSRSQSSERRSRYRSRSRSRQKEVSRITTTTRGRGRGSSSTSSKRSQRARGRGR 339
Query: 180 EKGR-RRSRSVSPRKQRRSEVKSSDVKERG 208
R RRS S SP +RS +S ++RG
Sbjct: 340 GGSRGRRSSSTSPTSSKRSRRESESSRQRG 369
Score = 56.2 bits (134), Expect = 1e-07
Identities = 49/158 (31%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 56 VKASSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRK 115
VK + + T +++ P +S Q+ N K PTT ++ T+R S DS ++
Sbjct: 187 VKVNKETVFTPVTSSTPPESPGG---QADSNTSSKTPTT---ATDSTSR-LSPADSRKQS 239
Query: 116 RRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRS--RSRSDSDVDRGRDR- 172
+++ ++ R RY R S R R+ E R R + R R RS RSRS S R R
Sbjct: 240 QQANTKGR-RYGRRPSSRTRRTTETRQRRRSRSKSRSRSRSRSRLRSRSRSQSSERRSRY 298
Query: 173 RKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKG 210
R R R R+K R + + + R S SS +R +G
Sbjct: 299 RSRSRSRQKEVSRITTTTRGRGRGSSSTSSKRSQRARG 336
>VE2_HPV20 (P50766) Regulatory protein E2
Length = 497
Score = 78.2 bits (191), Expect = 3e-14
Identities = 65/212 (30%), Positives = 90/212 (41%), Gaps = 31/212 (14%)
Query: 17 GEGAAKFKQGLGFSTSTSNDAVPKPGSSLVSSSSFLSQFVKASSSSTTTTASTTAPSDSD 76
G+ K + F+ TS+ PG S++S S + TTT STT S
Sbjct: 183 GQWEVKVNKETVFAPVTSSTPPDSPGGQADSNAS--------SQTPATTTDSTTRQSPRK 234
Query: 77 RKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSR 136
+ Q + + ++P++ +R + +T + SR + K RSRSRSR R R SR RS
Sbjct: 235 QSQQTNTKGRRYGRRPSSRTRRTTQTRQRRRSRSKSKSKSRSRSRSRHRSR---SRSRSE 291
Query: 137 SRERNSRYSDRDRDRDR-----------------DSGRSRSRSDSDVDRGRDRRKRERGR 179
S R SRY R R R G S S + R R R RG
Sbjct: 292 SPRRRSRYRSRSGSRGRVALRAITTTTTTTTRRAGGGSPTSTSSTTSQRSRQLRGGGRGG 351
Query: 180 EKGR---RRSRSVSPRKQRRSEVKSSDVKERG 208
+ R RRS S SP +RS +S V++ G
Sbjct: 352 SRQRARGRRSSSTSPTPSKRSRGESESVRQHG 383
Score = 32.3 bits (72), Expect = 2.0
Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 14/137 (10%)
Query: 74 DSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRR 133
D+ R S + K+ K+ T + V+ T D +D S + S+ DS
Sbjct: 175 DASRYSTTGQWEVKVNKE-TVFAPVTSSTPPDSPGGQAD-----SNASSQTPATTTDSTT 228
Query: 134 RSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRK 193
R R+++ + + + R R R S R R+R R R K + +SRS S +
Sbjct: 229 RQSPRKQSQQTNTKGRRYGR-------RPSSRTRRTTQTRQRRRSRSKSKSKSRSRSRSR 281
Query: 194 QR-RSEVKSSDVKERGK 209
R RS +S + R +
Sbjct: 282 HRSRSRSRSESPRRRSR 298
>MOG5_CAEEL (Q09530) Probable pre-mRNA splicing factor ATP-dependent
RNA helicase mog-5 (Sex determination protein mog-5)
(Masculinization of germ line protein 5)
Length = 1200
Score = 77.4 bits (189), Expect = 5e-14
Identities = 52/126 (41%), Positives = 66/126 (52%), Gaps = 13/126 (10%)
Query: 66 TASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYS-SRDSDRRKRRSRSRSRE 124
TA ++ D +QL+ ++ + + + + K NR S SR DR++RRSRS
Sbjct: 118 TAKEKEDNEDDLMAQLEKMEGRYESEKRLQKESDSKRNRSRSRSRSRDRKRRRSRSG--- 174
Query: 125 RYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRR 184
DRD RRRSRSRE RDRDRDRD GR R D DR RDRR R R+ G
Sbjct: 175 ---DRDRRRRSRSREDRRDRDRRDRDRDRDRGRGDRRGD---DRQRDRRDR---RDDGGA 225
Query: 185 RSRSVS 190
R V+
Sbjct: 226 RKSEVA 231
Score = 65.5 bits (158), Expect = 2e-10
Identities = 53/147 (36%), Positives = 73/147 (49%), Gaps = 32/147 (21%)
Query: 68 STTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYR 127
+ TA D + L + K++ + +E R+ +++ DS R + RSRSRSR+R
Sbjct: 116 ANTAKEKEDNEDDLMAQLEKMEGRYESEKRLQKES-------DSKRNRSRSRSRSRDR-- 166
Query: 128 DRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSR 187
RRRSRS DRDR R RSRSR D R RDRR R+R R++GR R
Sbjct: 167 ---KRRRSRS-------GDRDRRR-----RSRSREDR---RDRDRRDRDRDRDRGRGDRR 208
Query: 188 SVSPRKQRRSE-----VKSSDVKERGK 209
++ RR + S+V E GK
Sbjct: 209 GDDRQRDRRDRRDDGGARKSEVAEIGK 235
>RU17_XENLA (P09406) U1 small nuclear ribonucleoprotein 70 kDa (U1
snRNP 70 kDa) (snRNP70) (U1-70K)
Length = 471
Score = 75.9 bits (185), Expect = 2e-13
Identities = 57/183 (31%), Positives = 81/183 (44%), Gaps = 48/183 (26%)
Query: 73 SDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRD-- 130
S S + + + K ++K T E + +D ++D DR KRRSRSR R+R RDRD
Sbjct: 250 SRSRERRRKSRSREKEERKRTREKSKDKDKEKDKDNKDRDR-KRRSRSRERKRERDRDRE 308
Query: 131 ----------------------------------------SRRRSRSRERNSRYSDRDRD 150
SR R R R+R+ ++DRD
Sbjct: 309 KKEERVEAEVPEADDAPQDDAQIGDLGIDGIELKQEPEEKSRERDRERDRDREKGEKDRD 368
Query: 151 RDRDSGRSRSRSDSDVDRGRDR-RKRERGREKGRRRSRSVSPRKQR----RSEVKSSDVK 205
+DRD R R RS D DR +DR R R+R R++ R R R +++R RSE + V
Sbjct: 369 KDRDRDRDRRRSHRDRDREKDRDRDRDRRRDRDRDRERDKDHKRERDRGDRSEKREERVP 428
Query: 206 ERG 208
+ G
Sbjct: 429 DNG 431
Score = 68.2 bits (165), Expect = 3e-11
Identities = 41/107 (38%), Positives = 59/107 (54%), Gaps = 15/107 (14%)
Query: 106 YSSRDSDR-RKRRSRSRSRE-------RYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGR 157
Y RD +R R RR RSR RE R R R+ RR+SRSRE+ R R++ +D+D +
Sbjct: 222 YDERDRERERDRRERSREREKEPRERRRSRSRERRRKSRSREKEERKRTREKSKDKDKEK 281
Query: 158 SRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQR-RSEVKSSD 203
+ D RDR++R R RE+ R R R +++R +EV +D
Sbjct: 282 DKDNKD------RDRKRRSRSRERKRERDRDREKKEERVEAEVPEAD 322
Score = 64.7 bits (156), Expect = 4e-10
Identities = 48/146 (32%), Positives = 71/146 (47%), Gaps = 28/146 (19%)
Query: 74 DSDRKSQLQSIQNKLKK---KPTTESRV-SEKTNRDYSSRDSD------------RRKRR 117
D DRK + +S + K ++ + E RV +E D + +D +++
Sbjct: 287 DRDRKRRSRSRERKRERDRDREKKEERVEAEVPEADDAPQDDAQIGDLGIDGIELKQEPE 346
Query: 118 SRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDR----- 172
+SR R+R RDRD RE+ + D+DRDRDRD RS D + DR RDR
Sbjct: 347 EKSRERDRERDRD-------REKGEKDRDKDRDRDRDRRRSHRDRDREKDRDRDRDRRRD 399
Query: 173 RKRERGREKGRRRSRSVSPRKQRRSE 198
R R+R R+K +R R R ++R E
Sbjct: 400 RDRDRERDKDHKRERDRGDRSEKREE 425
Score = 63.5 bits (153), Expect = 8e-10
Identities = 57/209 (27%), Positives = 73/209 (34%), Gaps = 66/209 (31%)
Query: 73 SDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRER------- 125
S D S+ + ++ SR EK R+ S R+R+SRSR +E
Sbjct: 214 SGRDDTSRYDERDRERERDRRERSREREKEPRERRRSRSRERRRKSRSREKEERKRTREK 273
Query: 126 -----------YRDRDSRRRSRSRER---------------------------------- 140
+DRD +RRSRSRER
Sbjct: 274 SKDKDKEKDKDNKDRDRKRRSRSRERKRERDRDREKKEERVEAEVPEADDAPQDDAQIGD 333
Query: 141 --------------NSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRS 186
SR DR+RDRDR+ G D D DR R R R+R REK R R
Sbjct: 334 LGIDGIELKQEPEEKSRERDRERDRDREKGEKDRDKDRDRDRDRRRSHRDRDREKDRDRD 393
Query: 187 RSVSPRKQRRSEVKSSDVKERGKGSEMRK 215
R + R E +ER +G K
Sbjct: 394 RDRRRDRDRDRERDKDHKRERDRGDRSEK 422
Score = 60.1 bits (144), Expect = 9e-09
Identities = 41/181 (22%), Positives = 76/181 (41%), Gaps = 41/181 (22%)
Query: 74 DSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRR 133
D +R+ + + +K+P R + R S ++R+R +S+++ +++D
Sbjct: 226 DRERERDRRERSREREKEPRERRRSRSRERRRKSRSREKEERKRTREKSKDKDKEKDKDN 285
Query: 134 RSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDV--------------------------- 166
+ R R+R SR +R R+RDRD + R +++V
Sbjct: 286 KDRDRKRRSRSRERKRERDRDREKKEERVEAEVPEADDAPQDDAQIGDLGIDGIELKQEP 345
Query: 167 ---------DRGRDRRKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGK 217
+R RDR K E+ R+K R R R +RRS K+R + + R+ +
Sbjct: 346 EEKSRERDRERDRDREKGEKDRDKDRDRDRD-----RRRSHRDRDREKDRDRDRDRRRDR 400
Query: 218 N 218
+
Sbjct: 401 D 401
Score = 54.7 bits (130), Expect = 4e-07
Identities = 49/164 (29%), Positives = 80/164 (47%), Gaps = 9/164 (5%)
Query: 116 RRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGR-SRSRSDSDVDRGRDRRK 174
R SR ER R+R+ RR RSRER +R R R R+ R SRSR + R R++ K
Sbjct: 216 RDDTSRYDERDRERERDRRERSREREKEPRERRRSRSRERRRKSRSREKEERKRTREKSK 275
Query: 175 ---RERGRE-KGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIH-G 229
+E+ ++ K R R R R+++R + + KE +E+ + + D A++ G
Sbjct: 276 DKDKEKDKDNKDRDRKRRSRSRERKRERDRDREKKEERVEAEVPEADDAPQDDAQIGDLG 335
Query: 230 YDNMAPAERVKAKMKLQLSETAARDSDRGVGWERFEFNKDAPLD 273
D + + + K + + E RD DR G + + ++D D
Sbjct: 336 IDGIELKQEPEEKSRERDRE---RDRDREKGEKDRDKDRDRDRD 376
Score = 49.3 bits (116), Expect = 2e-05
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 12/109 (11%)
Query: 111 SDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRD-RDSGRSRSRSDSDVDRG 169
+D R S RY +RD R RER+ R R+R+++ R+ RSRSR R
Sbjct: 207 ADVNIRHSGRDDTSRYDERD-----RERERDRRERSREREKEPRERRRSRSRERRRKSRS 261
Query: 170 RDRRKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKN 218
R++ +R+R REK + + K++ + K D K R + E ++ ++
Sbjct: 262 REKEERKRTREKSKDKD------KEKDKDNKDRDRKRRSRSRERKRERD 304
Score = 45.8 bits (107), Expect = 2e-04
Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 13/99 (13%)
Query: 72 PSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDS 131
P + R+ + +++ K + + +R S RD DR K R R R R R RDRD
Sbjct: 345 PEEKSRERDRERDRDREKGEKDRDKDRDRDRDRRRSHRDRDREKDRDRDRDRRRDRDRDR 404
Query: 132 RRRSRSRERNSRYSDRDRDRDRDSG-RSRSRSDSDVDRG 169
R D+D R+RD G RS R + D G
Sbjct: 405 ER------------DKDHKRERDRGDRSEKREERVPDNG 431
>L7L2_MOUSE (Q7TNC4) Putative RNA-binding protein Luc7-like 2
(CGI-74 homolog)
Length = 392
Score = 73.2 bits (178), Expect = 1e-12
Identities = 51/148 (34%), Positives = 67/148 (44%), Gaps = 18/148 (12%)
Query: 85 QNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRY 144
Q +LK++ E EK R SR + +RSRSR R+R R R + R R+
Sbjct: 241 QERLKRREEREREEREKLRR---SRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSR 297
Query: 145 SDRDRDRDRDSGRSRSRS-----DSDVDRGRDRRKRERGREKGR----------RRSRSV 189
R R R R S RSRSRS S DR R+R KR +E+ R R SR
Sbjct: 298 EKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASRDRDRSSRDR 357
Query: 190 SPRKQRRSEVKSSDVKERGKGSEMRKGK 217
SPR + R + K S G+ + R +
Sbjct: 358 SPRDRDRKDKKRSYESANGRSEDRRSSE 385
Score = 67.0 bits (162), Expect = 7e-11
Identities = 48/122 (39%), Positives = 67/122 (54%), Gaps = 9/122 (7%)
Query: 97 RVSEKTNRDYSSRDSDR-RKRRSRSRSRERYRDRDSRRRSRSRERN---SRYSDRDRDRD 152
R + +R + SR R RKRR+RS+SRE+ SR SRSR R+ SR+S RDR R+
Sbjct: 270 RSRSREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRE 329
Query: 153 RDSGRS---RSRSDSDVDRGRDRRKRERG-REKGRR-RSRSVSPRKQRRSEVKSSDVKER 207
R RS R R R RDR R+R R++ R+ + RS R + +SS+ +E
Sbjct: 330 RSKRRSSKERFRDQDLASRDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEEREA 389
Query: 208 GK 209
G+
Sbjct: 390 GE 391
Score = 53.5 bits (127), Expect = 8e-07
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 5/108 (4%)
Query: 111 SDRRKRRSRSRSRERY-RDRDSR---RRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDV 166
++++++R++ R + R R+R+ R RRSRS +N + S R R+ R RS SR
Sbjct: 233 AEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRS-RSREHRRHRSRSMSRERKRR 291
Query: 167 DRGRDRRKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMR 214
R + R KR R R + RSRS S ++ R S S + + + S+ R
Sbjct: 292 TRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKER 339
Score = 52.8 bits (125), Expect = 1e-06
Identities = 43/119 (36%), Positives = 60/119 (50%), Gaps = 12/119 (10%)
Query: 73 SDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSS-RDSDRRKRRSR--SRSRERYRDR 129
S R+ + +S+ + K++ ++SR +R SS R R +RSR SR R R+R
Sbjct: 273 SREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRS--RER 330
Query: 130 DSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRE--RGREKGRRRS 186
RR S+ R R+ + RDRDR SR RS D DR +R E GR + RR S
Sbjct: 331 SKRRSSKERFRDQDLASRDRDRS-----SRDRSPRDRDRKDKKRSYESANGRSEDRRSS 384
Score = 52.4 bits (124), Expect = 2e-06
Identities = 37/139 (26%), Positives = 66/139 (46%), Gaps = 8/139 (5%)
Query: 119 RSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERG 178
R + E R ++ R++ER R +R+R+ RSRS S + KR R
Sbjct: 222 REKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNP--------KRSRS 273
Query: 179 REKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAER 238
RE R RSRS+S ++RR+ KS + + R + + ++ ++ + ++R
Sbjct: 274 REHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKR 333
Query: 239 VKAKMKLQLSETAARDSDR 257
+K + + + A+RD DR
Sbjct: 334 RSSKERFRDQDLASRDRDR 352
Score = 32.3 bits (72), Expect = 2.0
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 57 KASSSSTTTTASTTAPSDSDR---KSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDR 113
++SS S + + + S DR +S+ +S + + + + SR ++++RD S RD DR
Sbjct: 306 RSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLA-SRDRDRSSRDRSPRDRDR 364
Query: 114 R-KRRSRSRSRERYRDRDSRRRSRSRE 139
+ K+RS + R D RR S RE
Sbjct: 365 KDKKRSYESANGRSED---RRSSEERE 388
>L7L2_HUMAN (Q9Y383) Putative RNA-binding protein Luc7-like 2
(CGI-59) (CGI-74)
Length = 392
Score = 73.2 bits (178), Expect = 1e-12
Identities = 51/148 (34%), Positives = 67/148 (44%), Gaps = 18/148 (12%)
Query: 85 QNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRY 144
Q +LK++ E EK R SR + +RSRSR R+R R R + R R+
Sbjct: 241 QERLKRREEREREEREKLRR---SRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSR 297
Query: 145 SDRDRDRDRDSGRSRSRS-----DSDVDRGRDRRKRERGREKGR----------RRSRSV 189
R R R R S RSRSRS S DR R+R KR +E+ R R SR
Sbjct: 298 EKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDR 357
Query: 190 SPRKQRRSEVKSSDVKERGKGSEMRKGK 217
SPR + R + K S G+ + R +
Sbjct: 358 SPRDRDRKDKKRSYESANGRSEDRRSSE 385
Score = 64.7 bits (156), Expect = 4e-10
Identities = 47/122 (38%), Positives = 66/122 (53%), Gaps = 9/122 (7%)
Query: 97 RVSEKTNRDYSSRDSDR-RKRRSRSRSRERYRDRDSRRRSRSRERN---SRYSDRDRDRD 152
R + +R + SR R RKRR+RS+SRE+ SR SRSR R+ SR+S RDR R+
Sbjct: 270 RSRSREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRE 329
Query: 153 RDSGRSRSRSDSDVDRG---RDRRKRERG-REKGRR-RSRSVSPRKQRRSEVKSSDVKER 207
R RS D D RDR R+R R++ R+ + RS R + +SS+ +E
Sbjct: 330 RSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEEREA 389
Query: 208 GK 209
G+
Sbjct: 390 GE 391
Score = 53.9 bits (128), Expect = 6e-07
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 6/157 (3%)
Query: 111 SDRRKRRSRSRSRERY-RDRDSR---RRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDV 166
++++++R++ R + R R+R+ R RRSRS +N + S R R+ R RS SR
Sbjct: 233 AEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRS-RSREHRRHRSRSMSRERKRR 291
Query: 167 DRGRDRRKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKL 226
R + R KR R R + RSRS S ++ R S S + + + S+ R ++ +
Sbjct: 292 TRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKER-FRDQDLASCDR 350
Query: 227 IHGYDNMAPAERVKAKMKLQLSETAARDSDRGVGWER 263
+ +P +R + K R DR ER
Sbjct: 351 DRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEER 387
Score = 50.1 bits (118), Expect = 9e-06
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 15/138 (10%)
Query: 119 RSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERG 178
R + E R ++ R++ER R +R+R+ RSRS S + KR R
Sbjct: 222 REKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNP--------KRSRS 273
Query: 179 REKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAER 238
RE R RSRS+S ++RR+ KS + + R + + ++ H + +R
Sbjct: 274 REHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRS-------HQRSRHSSRDR 326
Query: 239 VKAKMKLQLSETAARDSD 256
+ + K + S+ RD D
Sbjct: 327 SRERSKRRSSKERFRDQD 344
Score = 49.7 bits (117), Expect = 1e-05
Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 12/119 (10%)
Query: 73 SDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSS-RDSDRRKRRSR--SRSRERYRDR 129
S R+ + +S+ + K++ ++SR +R SS R R +RSR SR R R+R
Sbjct: 273 SREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRS--RER 330
Query: 130 DSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRE--RGREKGRRRS 186
RR S+ R R+ + DRDR SR RS D DR +R E GR + RR S
Sbjct: 331 SKRRSSKERFRDQDLASCDRDRS-----SRDRSPRDRDRKDKKRSYESANGRSEDRRSS 384
>CTF8_HUMAN (Q96D72) Protein C20orf158
Length = 478
Score = 72.8 bits (177), Expect = 1e-12
Identities = 48/131 (36%), Positives = 68/131 (51%), Gaps = 11/131 (8%)
Query: 73 SDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRD-- 130
+ DR+ + + +N +++ R ++ SSRD DR + RS +R RER DR
Sbjct: 347 ASEDRRRERERGRNWSRERDWDRPREWDRHRDKDSSRDWDRNRERSANRDREREADRGKE 406
Query: 131 ---SRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSR 187
SR RSR+RER +RDR RDRD RSR R D D R R+R + + R K + +R
Sbjct: 407 WDRSRERSRNRER-----ERDRRRDRDRSRSRER-DRDKARDRERGRDRKDRSKSKESAR 460
Query: 188 SVSPRKQRRSE 198
P R S+
Sbjct: 461 DPKPEASRASD 471
Score = 60.8 bits (146), Expect = 5e-09
Identities = 48/136 (35%), Positives = 67/136 (48%), Gaps = 20/136 (14%)
Query: 85 QNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRR-SRSRERNSR 143
+ K ++P + R SE DRR+ R R R+ R RD D R R R+++S
Sbjct: 334 KEKPLEEPDAQGRASE-----------DRRRERERGRNWSRERDWDRPREWDRHRDKDSS 382
Query: 144 YSDRDRDRDRDSGRSRSRS---DSDVDRGRDR-RKRERGREKGRRRSRSVSPRKQR---R 196
D DR+R+R + R R R + DR R+R R RER R++ R R RS S + R R
Sbjct: 383 -RDWDRNRERSANRDREREADRGKEWDRSRERSRNRERERDRRRDRDRSRSRERDRDKAR 441
Query: 197 SEVKSSDVKERGKGSE 212
+ D K+R K E
Sbjct: 442 DRERGRDRKDRSKSKE 457
Score = 53.5 bits (127), Expect = 8e-07
Identities = 38/112 (33%), Positives = 54/112 (47%), Gaps = 21/112 (18%)
Query: 72 PSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDS 131
P + DR S ++ + + + +R E+ D R + R+R R R+R RDRD
Sbjct: 370 PREWDRHRDKDSSRDWDRNRERSANRDREREADRGKEWDRSRERSRNRERERDRRRDRD- 428
Query: 132 RRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGR 183
RSRSRER DRD+ RDR +RGRDR+ R + +E R
Sbjct: 429 --RSRSRER-----DRDKARDR-------------ERGRDRKDRSKSKESAR 460
Score = 32.3 bits (72), Expect = 2.0
Identities = 39/176 (22%), Positives = 61/176 (34%), Gaps = 13/176 (7%)
Query: 125 RYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRD----RRKRERGRE 180
++ D R RN + R R+R + + + D +GR RR+RERGR
Sbjct: 302 QWASADFREGKGHEYRNQTFEGRQRERFDVGPKEKPLEEPDA-QGRASEDRRRERERGRN 360
Query: 181 KGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVK 240
R R R + SS +R + + + D K +D R +
Sbjct: 361 WSRERDWDRPREWDRHRDKDSSRDWDRNRERSANRDREREADRGK---EWDRSRERSRNR 417
Query: 241 AKMK-----LQLSETAARDSDRGVGWERFEFNKDAPLDDEEVEGAEDDASLVKHIG 291
+ + S + RD D+ ER KD E + +AS G
Sbjct: 418 ERERDRRRDRDRSRSRERDRDKARDRERGRDRKDRSKSKESARDPKPEASRASDAG 473
>SON_HUMAN (P18583) SON protein (SON3) (Negative regulatory
element-binding protein) (NRE-binding protein) (DBP-5)
(Bax antagonist selected in saccharomyces 1) (BASS1)
Length = 2426
Score = 72.4 bits (176), Expect = 2e-12
Identities = 54/187 (28%), Positives = 85/187 (44%), Gaps = 24/187 (12%)
Query: 55 FVKASSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYS-----SR 109
FVK + + + K + S++++ K+ ++E + ++T+ S S
Sbjct: 1793 FVKVKDTHEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSS 1852
Query: 110 DSDRRKRRSRSRSRERYRDRDSRRRSRSRERNS------------RYSDRDRDRDRDSGR 157
S + ++RSRSR R R R SR RS+SR R S R R+R R R S R
Sbjct: 1853 KSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSR 1912
Query: 158 -------SRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKG 210
+RSR+ S R +R R R GRRRS S+SP ++ R+ + S R
Sbjct: 1913 DNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSR 1972
Query: 211 SEMRKGK 217
+ R+ +
Sbjct: 1973 TPSRRSR 1979
Score = 61.6 bits (148), Expect = 3e-09
Identities = 64/201 (31%), Positives = 89/201 (43%), Gaps = 31/201 (15%)
Query: 38 VPKPGSSLVSSSSFLSQFVKASSSSTTTTASTTAPSDSDRKSQLQSIQNK------LKKK 91
+PK L S + + + AS +A++ S ++ S + K +K K
Sbjct: 1738 LPKDMERLTSLRAGIEGPLLASDVGRDRSAASPVVSSMPERASESSSEEKDDYEIFVKVK 1797
Query: 92 PTTESRVSEKTNRDYSS----RDSDRRKRRSRSRSRE-RYRDRDSRRRSRSRERNSRYSD 146
T E K NRD RDS R R RS+S E + R R S RSR+R+R+S+
Sbjct: 1798 DTHEKSKKNK-NRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKS 1856
Query: 147 RDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKE 206
R RSRSRS R RR+ R R K R R RSVS K++RS K
Sbjct: 1857 H-----RSQTRSRSRS-------RRRRRSSRSRSKSRGR-RSVSKEKRKRSP------KH 1897
Query: 207 RGKGSEMRKGKNVGVDYAKLI 227
R K E ++ ++ D K +
Sbjct: 1898 RSKSRERKRKRSSSRDNRKTV 1918
Score = 60.8 bits (146), Expect = 5e-09
Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 17/206 (8%)
Query: 57 KASSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDR--- 113
++S S + + + + ++S +++ +K+ + SR + KT R S S R
Sbjct: 1872 RSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRS 1931
Query: 114 ----RKRRSRSRSRERYRDRDSRRRSRSRERNSRY-SDRDRDRDRDSGRSRSRSDSDVDR 168
R+RRSRS R R RRSR+ R SR S R R R S RS + R
Sbjct: 1932 HTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRR 1991
Query: 169 GRDRRKRERGREKGRRRSRSVSPRKQRRSEV-------KSSDVKERGKGSEMRKG--KNV 219
R +R R R RRRS S+SP + RRS +S ++R + SE + +
Sbjct: 1992 SRTPSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERGRSPKRLT 2051
Query: 220 GVDYAKLIHGYDNMAPAERVKAKMKL 245
+D A+L+ A A KA + L
Sbjct: 2052 DLDKAQLLEIAKANAAAMCAKAGVPL 2077
Score = 57.0 bits (136), Expect = 7e-08
Identities = 58/191 (30%), Positives = 81/191 (42%), Gaps = 15/191 (7%)
Query: 40 KPGSSLVSSSSFLSQFVKASSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVS 99
K SSL S S S T+ + S S KS +++ + + S S
Sbjct: 1817 KRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRS 1876
Query: 100 EKTNRDYSSRDSDRRKR--RSRSRSRERYRDRDSRR--------RSRSRERNSR-YSDRD 148
+R S ++RKR + RS+SRER R R S R RSR+ R SR ++
Sbjct: 1877 RSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSR 1936
Query: 149 RDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRR----RSRSVSPRKQRRSEVKSSDV 204
R R R GR RS S S R R +R R + R RSR+ S R + S +
Sbjct: 1937 RRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPS 1996
Query: 205 KERGKGSEMRK 215
+ R S +R+
Sbjct: 1997 RRRRSRSVVRR 2007
>SFR4_MOUSE (Q8VE97) Splicing factor, arginine/serine-rich 4
Length = 489
Score = 70.5 bits (171), Expect = 7e-12
Identities = 63/191 (32%), Positives = 95/191 (48%), Gaps = 18/191 (9%)
Query: 40 KPGSSLVSSSSFLSQFVKASSSSTTTTASTTAPSDSDR-KSQLQSIQNKLKKKPTTESRV 98
+ GSS S S S+ S S + + + + + S S + KS+ S NK + + + +
Sbjct: 207 RSGSSKSSHSKSRSRSRSGSHSRSKSRSRSQSRSRSKKEKSRSPSKDNKSRSRSRSPDKS 266
Query: 99 SEKT---------NRDYS----SRDSDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYS 145
K+ N D + S R +SRSRS+ER R + RRRS SR R+ S
Sbjct: 267 RSKSKDHAEDKLQNNDSAGKAKSHSPSRHDSKSRSRSQER-RAEEERRRSVSRARSQEKS 325
Query: 146 DRDRDRDRDSGRSRSRSDSDVDRGRDRRK-RERGREKGRRRSRSVSPRKQRRSEVKSSDV 204
R +++ RSRSRS S R +D+RK R+R R++ R RSRS S R ++ S + S V
Sbjct: 326 -RSQEKSLLKSRSRSRSRSR-SRSKDKRKGRKRSRDESRSRSRSKSERSRKHSSKRDSKV 383
Query: 205 KERGKGSEMRK 215
S+ +K
Sbjct: 384 SSSSSSSKKKK 394
Score = 65.9 bits (159), Expect = 2e-10
Identities = 52/206 (25%), Positives = 80/206 (38%), Gaps = 10/206 (4%)
Query: 5 KAAAYYDELTRKGEGAAKFKQGLGFSTSTSNDAVPKPGSSLVSSSSFLSQFVKASSSSTT 64
++ + + +R G++K S S S S S S + S S
Sbjct: 195 RSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSHSRSKSRSRSQSRSRSKKEKSRSPSKDN 254
Query: 65 TTASTTAPSDSDRKSQLQSIQNKL-------KKKPTTESRVSEKTNRDYSSRDSDRRKRR 117
+ S + D R ++KL K K + SR K+ R ++ +RR
Sbjct: 255 KSRSRSRSPDKSRSKSKDHAEDKLQNNDSAGKAKSHSPSRHDSKSRSRSQERRAEEERRR 314
Query: 118 SRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRER 177
S SR+R + + R + SR R R +D+ GR RSR +S R R R K ER
Sbjct: 315 SVSRARSQEKSRSQEKSLLKSRSRSRSRSRSRSKDKRKGRKRSRDES---RSRSRSKSER 371
Query: 178 GREKGRRRSRSVSPRKQRRSEVKSSD 203
R+ +R VS + K +D
Sbjct: 372 SRKHSSKRDSKVSSSSSSSKKKKDTD 397
Score = 60.8 bits (146), Expect = 5e-09
Identities = 52/182 (28%), Positives = 82/182 (44%), Gaps = 28/182 (15%)
Query: 57 KASSSSTTTTASTTAPSDSDRKSQLQSIQNKL---KKKPTTESRVSEKTNRDYSSRDSDR 113
K ++ + A + +PS D KS+ +S + + +++ + +R EK+ S R
Sbjct: 277 KLQNNDSAGKAKSHSPSRHDSKSRSRSQERRAEEERRRSVSRARSQEKSRSQEKSLLKSR 336
Query: 114 RKRRSRSRSR--------ERYRDRDSRRRSRSRERNSRYSDRDRD-------------RD 152
+ RSRSRSR +R RD +SR RSRS+ SR RD +D
Sbjct: 337 SRSRSRSRSRSKDKRKGRKRSRD-ESRSRSRSKSERSRKHSSKRDSKVSSSSSSSKKKKD 395
Query: 153 RDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSE 212
D RS SRS V + R+ K E G+ R S +P + R+ +S+ + +E
Sbjct: 396 TDHSRSPSRS---VSKEREHAKAESGQRGSRAEGESEAPNPEPRARSRSTSKSKPNVPAE 452
Query: 213 MR 214
R
Sbjct: 453 SR 454
Score = 59.7 bits (143), Expect = 1e-08
Identities = 57/212 (26%), Positives = 94/212 (43%), Gaps = 25/212 (11%)
Query: 57 KASSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKR 116
+ S S + + + + + S RKS+ +S +K + S +R S S R R
Sbjct: 182 RRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSHSRSKSRSRSQSRSR 241
Query: 117 RSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDR-----DSGRSRSRSDSDVDRGRD 171
+ +SR +D SR RSRS ++ SR +D D+ +G+++S S S D
Sbjct: 242 SKKEKSRSPSKDNKSRSRSRSPDK-SRSKSKDHAEDKLQNNDSAGKAKSHSPSRHDSKSR 300
Query: 172 RRKRERGREKGRRRSRS-----VSPRKQRRSEVKS---SDVKERGKGSEMRKGKNVGVDY 223
R +ER E+ RRRS S R Q +S +KS S + R + + RKG+ D
Sbjct: 301 SRSQERRAEEERRRSVSRARSQEKSRSQEKSLLKSRSRSRSRSRSRSKDKRKGRKRSRDE 360
Query: 224 AKLIHGYDNMAPAERVKAKMKLQLSETAARDS 255
++ R ++K + ++ RDS
Sbjct: 361 SR-----------SRSRSKSERSRKHSSKRDS 381
Score = 55.1 bits (131), Expect = 3e-07
Identities = 75/308 (24%), Positives = 123/308 (39%), Gaps = 32/308 (10%)
Query: 73 SDSDRKSQLQSIQNKL---KKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDR 129
S SD K L+ + +K E + + R YS + RS SRSR R R
Sbjct: 149 SYSDMKRALEKLDGTEVNGRKIRLVEDKPGSRRRRSYS-------RSRSHSRSRSRSR-- 199
Query: 130 DSRRRSRSRERNSRYS-DRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGR---EKGRRR 185
R+SRSR +S+ S + R R R SRS+S S + R R K+E+ R + + R
Sbjct: 200 -HSRKSRSRSGSSKSSHSKSRSRSRSGSHSRSKSRSR-SQSRSRSKKEKSRSPSKDNKSR 257
Query: 186 SRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKAKMKL 245
SRS SP K R KS D E + GK ++ H + + ++ +A+ +
Sbjct: 258 SRSRSPDKSRS---KSKDHAEDKLQNNDSAGK--AKSHSPSRHDSKSRSRSQERRAEEER 312
Query: 246 QLSETAARDSDRGVGWERF---------EFNKDAPLDDEEVEGAEDDASLVKHIGQSFRF 296
+ S + AR ++ E+ ++ D + D S + +S R
Sbjct: 313 RRSVSRARSQEKSRSQEKSLLKSRSRSRSRSRSRSKDKRKGRKRSRDESRSRSRSKSERS 372
Query: 297 SAVESKREDQIQAAHDEAMFGAPAPPPPTSSTDSEPERENEKEVDNKKDLVSSLLSETVL 356
SKR+ ++ ++ + + S ERE+ K ++ + SE
Sbjct: 373 RKHSSKRDSKVSSSSSSSKKKKDTDHSRSPSRSVSKEREHAKAESGQRGSRAEGESEAPN 432
Query: 357 ARPKGSWR 364
P+ R
Sbjct: 433 PEPRARSR 440
Score = 47.8 bits (112), Expect = 5e-05
Identities = 47/189 (24%), Positives = 76/189 (39%), Gaps = 9/189 (4%)
Query: 14 TRKGEGAAKFKQGLGFSTSTSNDAVPKPGSSLVSSSSFLSQFVKASSSSTTTTASTTAPS 73
+R E A+ ++ S + S + SL+ S S ++ S S
Sbjct: 301 SRSQERRAEEERRRSVSRARSQEKSRSQEKSLLKSRSRSRS--RSRSRSKDKRKGRKRSR 358
Query: 74 DSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRR 133
D R + K +S+VS ++ +D+D + SRS S+ER
Sbjct: 359 DESRSRSRSKSERSRKHSSKRDSKVSSSSSSSKKKKDTDHSRSPSRSVSKER-----EHA 413
Query: 134 RSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSP-R 192
++ S +R SR ++ + + R+RSRS S R R + + RSRS SP R
Sbjct: 414 KAESGQRGSR-AEGESEAPNPEPRARSRSTSKSKPNVPAESRSRSKSASKTRSRSKSPSR 472
Query: 193 KQRRSEVKS 201
RS +S
Sbjct: 473 SASRSPSRS 481
Score = 37.4 bits (85), Expect = 0.061
Identities = 30/112 (26%), Positives = 52/112 (45%), Gaps = 6/112 (5%)
Query: 57 KASSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKR 116
K S +++++S+ D+D +K ++ ES ++ +R ++ +
Sbjct: 378 KRDSKVSSSSSSSKKKKDTDHSRSPSRSVSKEREHAKAES--GQRGSRAEGESEAPNPEP 435
Query: 117 RSRSRSRERYRDR---DSRRRSRSRERN-SRYSDRDRDRDRDSGRSRSRSDS 164
R+RSRS + + +SR RS+S + SR R R RSRSRS S
Sbjct: 436 RARSRSTSKSKPNVPAESRSRSKSASKTRSRSKSPSRSASRSPSRSRSRSHS 487
>RU17_ARATH (Q42404) U1 small nuclear ribonucleoprotein 70 kDa (U1
snRNP 70 kDa) (snRNP70) (U1-70K)
Length = 427
Score = 69.7 bits (169), Expect = 1e-11
Identities = 51/159 (32%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 89 KKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRE------RYRDRDSRRRSR-SRERN 141
+++P + SE+ +R R+ R K + R RSRE R R RD R + R+R+
Sbjct: 245 EQQPQGRTSQSEEPSRPREEREKSREKGKERERSRELSHEQPRERSRDRPREDKHHRDRD 304
Query: 142 SRYSDRDRDRDRDSGRSRSRSD---SDVDRGRDRRKRERGREKGRRRSRSVSPRKQRR-- 196
DRDRD RD R+R R D D DRGRDR R+ R++ R++ R +
Sbjct: 305 QGGRDRDRDSRRDRDRTRDRGDRDRRDRDRGRDRTSRDHDRDRSRKKERDYEGGEYEHEG 364
Query: 197 -SEVKSSDVKERGKGSEMR-KGKNVGVDYAKLIHGYDNM 233
+ D + RG+ E R ++ D + H YD M
Sbjct: 365 GGRSRERDAEYRGEPEETRGYYEDDQGDTDRYSHRYDKM 403
Score = 42.7 bits (99), Expect = 0.001
Identities = 35/119 (29%), Positives = 51/119 (42%), Gaps = 15/119 (12%)
Query: 74 DSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRE--------- 124
D DR S+ +++ + + + R ++ RD +SRD DR + R + R E
Sbjct: 309 DRDRDSRRD--RDRTRDRGDRDRRDRDR-GRDRTSRDHDRDRSRKKERDYEGGEYEHEGG 365
Query: 125 -RYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSD--VDRGRDRRKRERGRE 180
R R+RD+ R E Y D D DR S R + D +R R KR RE
Sbjct: 366 GRSRERDAEYRGEPEETRGYYEDDQGDTDRYSHRYDKMEEDDFRYEREYKRSKRSESRE 424
>T2_MOUSE (Q06666) Octapeptide-repeat protein T2
Length = 185
Score = 69.3 bits (168), Expect = 1e-11
Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 2/123 (1%)
Query: 97 RVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDS-RRRSRSRERNS-RYSDRDRDRDRD 154
R E+ R+S+R++ R R RER R R++ R+R R R R + R ++R R R+R
Sbjct: 3 RGREREAESQRVRESERQRGREAERQRERQRGREAERQRGRERGREAEREAERQRGRERQ 62
Query: 155 SGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMR 214
GR + +RGR+ + RGRE R+R R +QR E + ++R + E +
Sbjct: 63 RGRGEAERQRGRERGREVERHRRGREAERQRGREREAERQRGREAEREAERQRERQRERQ 122
Query: 215 KGK 217
+G+
Sbjct: 123 RGR 125
Score = 69.3 bits (168), Expect = 1e-11
Identities = 46/150 (30%), Positives = 78/150 (51%), Gaps = 9/150 (6%)
Query: 71 APSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRD 130
A S R+S+ Q + +++ R +E+ R+++R R R R R+R R
Sbjct: 9 AESQRVRESERQRGREAERQRERQRGREAERQRGRERGREAEREAERQRGRERQRGRGEA 68
Query: 131 SRRRSRSR------ERNSRYSDRDRDRDRDSGRSRSR-SDSDVDRGRDR-RKRERGREKG 182
R+R R R R R ++R R R+R++ R R R ++ + +R R+R R+R+RGRE
Sbjct: 69 ERQRGRERGREVERHRRGREAERQRGREREAERQRGREAEREAERQRERQRERQRGREAE 128
Query: 183 RRRSRSVSPRKQRRSEVKSSDVKERGKGSE 212
R+R R ++ R +E K ++RG+ E
Sbjct: 129 RQRGREAERQRGREAE-KQRGERQRGREVE 157
Score = 52.8 bits (125), Expect = 1e-06
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 5/142 (3%)
Query: 74 DSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRR 133
+++R+++ Q + + + + E + + R+ R R R R RE R R R
Sbjct: 48 EAEREAERQRGRERQRGRGEAERQRGRERGREVERHRRGREAERQRGREREAERQR-GRE 106
Query: 134 RSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRK 193
R ER R R+R R R++ R R R +++ RGR+ K+ R++GR R
Sbjct: 107 AEREAERQ-RERQRERQRGREAERQRGR-EAERQRGREAEKQRGERQRGREVEAEAEGR- 163
Query: 194 QRRSEVKSSDVKERGKGSEMRK 215
R + ++ E+G+G R+
Sbjct: 164 -GRGMRQEAEATEQGQGQRQRQ 184
Score = 52.0 bits (123), Expect = 2e-06
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 18/111 (16%)
Query: 116 RRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRS---DSDVDRGRDR 172
+R R R E R R+S R+ R R R+ +R GR R R +++ RGR+R
Sbjct: 2 QRGREREAESQRVRESERQRGREAERQRERQRGREAERQRGRERGREAEREAERQRGRER 61
Query: 173 RK------RERGREKGR-----RRSRSVSPRKQRRSEVKSSDVKERGKGSE 212
++ R+RGRE+GR RR R ++ R E + ++RG+ +E
Sbjct: 62 QRGRGEAERQRGRERGREVERHRRGREAERQRGREREAE----RQRGREAE 108
Score = 43.1 bits (100), Expect = 0.001
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 12/108 (11%)
Query: 82 QSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRR-------R 134
+ ++ + + R E+ R+++R R R R RER R R++ R R
Sbjct: 78 REVERHRRGREAERQRGREREAERQRGREAEREAERQRERQRERQRGREAERQRGREAER 137
Query: 135 SRSRERNSRYSDRDRDRDRDS-----GRSRSRSDSDVDRGRDRRKRER 177
R RE + +R R R+ ++ GR + ++G+ +R+R+R
Sbjct: 138 QRGREAEKQRGERQRGREVEAEAEGRGRGMRQEAEATEQGQGQRQRQR 185
>SON_MOUSE (Q9QX47) SON protein
Length = 2404
Score = 69.3 bits (168), Expect = 1e-11
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 24/187 (12%)
Query: 55 FVKASSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYS-----SR 109
FVK + + + K + S++++ K+ ++E + ++T+ S S
Sbjct: 1778 FVKVKDTHEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSS 1837
Query: 110 DSDRRKRRSRSRSRERYRDRDSRRRSRSRERNS------------RYSDRDRDRDRDSGR 157
S + ++RSRSR R R R SR RS+SR R S R R+R R R S R
Sbjct: 1838 KSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSR 1897
Query: 158 -------SRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKG 210
+RSR+ S R +R R GRRRS S+SP ++ R+ + S R
Sbjct: 1898 DNRKAARARSRTPSRRSRSHTPSRRRRSISVGRRRSFSISPSRRSRTPSRRSRTPSRRSR 1957
Query: 211 SEMRKGK 217
+ R+ +
Sbjct: 1958 TPSRRSR 1964
Score = 59.7 bits (143), Expect = 1e-08
Identities = 53/161 (32%), Positives = 73/161 (44%), Gaps = 18/161 (11%)
Query: 52 LSQFVKASSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSS--- 108
L+ V+ S+ + + S+ S+ + K T + + NRD
Sbjct: 1742 LASEVERDKSAASPVVISIPERASESSSEEKDDYEIFVKVKDTHEKSKKNKNRDKGEKEK 1801
Query: 109 -RDSDRRKRRSRSRSRE-RYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDV 166
RDS R R RS+S E + R R S RSR+R+R+S+ R RSRSRS
Sbjct: 1802 KRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSH-----RSQTRSRSRS---- 1852
Query: 167 DRGRDRRKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKER 207
R RR+ R R K R R RSVS K++RS S +ER
Sbjct: 1853 ---RRRRRSSRSRSKSRGR-RSVSKEKRKRSPKHRSKSRER 1889
Score = 55.8 bits (133), Expect = 2e-07
Identities = 65/220 (29%), Positives = 93/220 (41%), Gaps = 22/220 (10%)
Query: 48 SSSFLSQFVKASSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYS 107
SS S + S S + ++ S S + + + K K+ P S+ E+ + S
Sbjct: 1836 SSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSS 1895
Query: 108 SRDSDRRKR-RSRSRSRERYRDRDSRRR-----------SRSRERNSRY-SDRDRDRDRD 154
SRD+ + R RSR+ SR SRRR S S R SR S R R R
Sbjct: 1896 SRDNRKAARARSRTPSRRSRSHTPSRRRRSISVGRRRSFSISPSRRSRTPSRRSRTPSRR 1955
Query: 155 SGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQRRSEV-------KSSDVKER 207
S RS + R R +R R R RRRS S+SP + RRS +S ++R
Sbjct: 1956 SRTPSRRSRTPSRRSRTPSRRRRSRSAVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKR 2015
Query: 208 GKGSEMRKG--KNVGVDYAKLIHGYDNMAPAERVKAKMKL 245
+ SE + + +D A+L+ A A KA + L
Sbjct: 2016 SRSSERGRSPKRLTDLDKAQLLEIAKANAAAMCAKAGVPL 2055
Score = 37.7 bits (86), Expect = 0.047
Identities = 51/174 (29%), Positives = 73/174 (41%), Gaps = 16/174 (9%)
Query: 32 STSNDAVPKPGSSLVSSSSFLSQFVKASSSSTTTTASTTAPSDSDRKSQLQSIQ-NKLKK 90
S S + K SS + + ++ S S + T S S S + + SI ++ +
Sbjct: 1884 SKSRERKRKRSSSRDNRKAARARSRTPSRRSRSHTPSRRRRSISVGRRRSFSISPSRRSR 1943
Query: 91 KPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYS-DRDR 149
P+ SR + +R SR S RRSR+ SR RRRSRS R +S R
Sbjct: 1944 TPSRRSRTPSRRSRT-PSRRSRTPSRRSRTPSR--------RRRSRSAVRRRSFSISPVR 1994
Query: 150 DRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQRRSEVKSSD 203
R RSR+ R RRKR R E+GR R K + E+ ++
Sbjct: 1995 LR-----RSRTPLRRRFSRSPIRRKRSRSSERGRSPKRLTDLDKAQLLEIAKAN 2043
>SFR6_HUMAN (Q13247) Splicing factor, arginine/serine-rich 6
(Pre-mRNA splicing factor SRP55)
Length = 344
Score = 69.3 bits (168), Expect = 1e-11
Identities = 52/121 (42%), Positives = 66/121 (53%), Gaps = 15/121 (12%)
Query: 88 LKKKPTTESRVSEKTNRDYS-SRDSDRRKRRSRSRSRERYRDRD---SRRRSRSRERNSR 143
++ KP T R R YS SR R +RRSRSRSR R R S+ RSRSR R S+
Sbjct: 179 IEDKPRTSHR------RSYSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRSR-SK 231
Query: 144 YSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGR---EKGRRRSRSVSPRKQRRSEVK 200
R R + R S RS+S+S DRG R R + EK R RSRS SP++ + ++K
Sbjct: 232 GRSRSRSKGRKS-RSKSKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIK 290
Query: 201 S 201
S
Sbjct: 291 S 291
Score = 67.0 bits (162), Expect = 7e-11
Identities = 50/114 (43%), Positives = 59/114 (50%), Gaps = 6/114 (5%)
Query: 109 RDSDRRK---RRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSD 165
R S RR RSRSRSR R R R SRR SRSR R+ S R R R R GRSRSRS
Sbjct: 184 RTSHRRSYSGSRSRSRSRRRSRSR-SRRSSRSRSRSISKS-RSRSRSRSKGRSRSRSKGR 241
Query: 166 VDRGRDRRKRERGR-EKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKN 218
R + + K + R RSRS ++ RS +S KE GKG K ++
Sbjct: 242 KSRSKSKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIKSKSRS 295
Score = 58.2 bits (139), Expect = 3e-08
Identities = 49/157 (31%), Positives = 77/157 (48%), Gaps = 23/157 (14%)
Query: 72 PSDSDRKSQLQS-IQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRD 130
P S R+S S +++ +++ + SR S ++ SR + + RSRSRS+ R R R
Sbjct: 183 PRTSHRRSYSGSRSRSRSRRRSRSRSRRSSRSR----SRSISKSRSRSRSRSKGRSRSRS 238
Query: 131 SRRRSRSRERNSRYSDR-----DRDRDRD---SGRSRSRSDSDVDRGR-DRRKRERGREK 181
R+SRS+ ++ SDR R R +D RSRSRS S + G+ D + + R R +
Sbjct: 239 KGRKSRSKSKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIKSKSRSRSQ 298
Query: 182 GRRRS---------RSVSPRKQRRSEVKSSDVKERGK 209
R S RSVSP +R + S + + +
Sbjct: 299 SRSNSPLPVPPSKARSVSPPPKRATSRSRSRSRSKSR 335
Score = 53.5 bits (127), Expect = 8e-07
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 14/148 (9%)
Query: 57 KASSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYS-SRDSDRRK 115
++ S S + S + S R + +++ + + SR K + S S+ +
Sbjct: 195 RSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSRSRSKGRKSRSKSKSKPKSD 254
Query: 116 RRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDV--------- 166
R S S SR R +D + RSRSR R+ + + + + + RS+SRS+S +
Sbjct: 255 RGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIKSKSRSRSQSRSNSPLPVPPSKARS 314
Query: 167 ----DRGRDRRKRERGREKGRRRSRSVS 190
+ R R R R K R RSRS S
Sbjct: 315 VSPPPKRATSRSRSRSRSKSRSRSRSSS 342
Score = 50.1 bits (118), Expect = 9e-06
Identities = 43/129 (33%), Positives = 55/129 (42%), Gaps = 15/129 (11%)
Query: 134 RSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDR-----RKRERGREKGRRRSRS 188
+ R+ R S R R R R RSRSR S R R R R R R R KGR RSRS
Sbjct: 182 KPRTSHRRSYSGSRSRSRSRRRSRSRSRRSS---RSRSRSISKSRSRSRSRSKGRSRSRS 238
Query: 189 VSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKAKMKLQLS 248
K R+S KS + +GS +Y K + +P E K +K S
Sbjct: 239 ----KGRKSRSKSKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIK---S 291
Query: 249 ETAARDSDR 257
++ +R R
Sbjct: 292 KSRSRSQSR 300
Score = 34.7 bits (78), Expect = 0.40
Identities = 30/114 (26%), Positives = 37/114 (32%), Gaps = 18/114 (15%)
Query: 119 RSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDR---------------DSGRSRSRSD 163
R Y D R + YSD R D+ D R+ R
Sbjct: 131 RQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIEDKPRTSHRRS 190
Query: 164 SDVDRGRD---RRKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMR 214
R R RR R R R R RSRS+S + R + R KG + R
Sbjct: 191 YSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSRSRSKGRKSR 244
Score = 33.1 bits (74), Expect = 1.2
Identities = 29/117 (24%), Positives = 47/117 (39%), Gaps = 5/117 (4%)
Query: 16 KGEGAAKFKQGLGFSTSTSNDAVPKP--GSSLVSSSSFLSQFVKASSSSTTTTASTTAPS 73
KG ++ K G + + + + PK GS S S ++ K+ S S + +
Sbjct: 231 KGRSRSRSK---GRKSRSKSKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKG 287
Query: 74 DSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRD 130
D KS+ +S P S+ + + R + RS+SRSR R RD
Sbjct: 288 DIKSKSRSRSQSRSNSPLPVPPSKARSVSPPPKRATSRSRSRSRSKSRSRSRSSSRD 344
>SFRC_MOUSE (Q8BZX4) Splicing factor, arginine/serine-rich 12
(Serine-arginine-rich splicing regulatory protein 86)
(SRrp86)
Length = 494
Score = 68.9 bits (167), Expect = 2e-11
Identities = 65/274 (23%), Positives = 115/274 (41%), Gaps = 32/274 (11%)
Query: 59 SSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRS 118
S S T + + +++ S S RK +++ + + + ++ + R R +R+S
Sbjct: 195 SRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKS 254
Query: 119 RSRSRERYRDRDSRR----------RSRSRERNS---------RYSDRDRDRDRDSGRSR 159
RSRSR R + +D+R R + RER + D+DR++++D + R
Sbjct: 255 RSRSRSRDKRKDTREKVKERVKEKEREKEREREKDREKDKERGKNKDKDREKEKDHEKER 314
Query: 160 SR-----SDSDVDRGRDRRKRERGREKGRRRSRSV--SPRKQRRSEVKSSDVKERGKGSE 212
+ D D +R +DR K + K ++SR+ S RRS S + + R S
Sbjct: 315 DKEKEKEQDKDKEREKDRSKETDEKRKKEKKSRTPPRSYNASRRSRSTSRERRRRRSRSS 374
Query: 213 MRKGKNVGVDYAKLIHGYDNMAPAERVKAKMKLQLSETAARDSDRGVGWERFEFNKDAPL 272
R + +K + + +P+ R + K + + + SDR ER K +
Sbjct: 375 SRSPRT-----SKTVKRKSSRSPSPRGRNKKEKKREKERDHISDRRER-ERSTSTKKSSG 428
Query: 273 DDEEVEGAEDDASLVKHIGQSFRFSAVESKREDQ 306
D + E E + VK S A SK D+
Sbjct: 429 DRDGKEKVEKSTTPVKEKEHSKESDATVSKAADE 462
Score = 63.2 bits (152), Expect = 1e-09
Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 15/215 (6%)
Query: 15 RKGEGAAKFKQGLGFSTSTSNDAVPKPGSSLVSSSSFLSQFVKASSSSTTTTASTTAPSD 74
RKG + + S+S S+ + S S S S+ + + + + S
Sbjct: 190 RKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSR 249
Query: 75 SDRKSQLQSIQNKLKKKPTTES---RVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDS 131
RKS+ +S +++ K+K T E RV EK R+ DR K + R +++++ R+++
Sbjct: 250 ERRKSRSRS-RSRDKRKDTREKVKERVKEKEREKEREREKDREKDKERGKNKDKDREKEK 308
Query: 132 RRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGR--------DRRKRERGREKGR 183
+ + D+D++R++D + + R RR R RE+ R
Sbjct: 309 DHEKERDKEKEKEQDKDKEREKDRSKETDEKRKKEKKSRTPPRSYNASRRSRSTSRERRR 368
Query: 184 RRSRS--VSPRKQRRSEVKSS-DVKERGKGSEMRK 215
RRSRS SPR + + KSS RG+ + +K
Sbjct: 369 RRSRSSSRSPRTSKTVKRKSSRSPSPRGRNKKEKK 403
Score = 63.2 bits (152), Expect = 1e-09
Identities = 47/198 (23%), Positives = 91/198 (45%), Gaps = 12/198 (6%)
Query: 34 SNDAVPKPGSSLVSSSSF----LSQFVKASSSSTTTTASTTAPSDSDRKSQLQSIQNKLK 89
SN+A+ KP +++ + + V+ + S + + ++RK + K
Sbjct: 143 SNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSNERKGGRSRSHTRSK 202
Query: 90 KKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRD-SRRRSRSRE-RNSRYSDR 147
+ +++S K ++ S+ R RSRSR ++R R + ++RS+SRE R SR R
Sbjct: 203 SRSSSKSHSRRKRSQ---SKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSR 259
Query: 148 DRDRDRDSGRSRSRSDSDVDRGRDRRK---RERGREKGRRRSRSVSPRKQRRSEVKSSDV 204
RD+ +D+ + +R ++R + RE+ +E+G+ + + K E
Sbjct: 260 SRDKRKDTREKVKERVKEKEREKEREREKDREKDKERGKNKDKDREKEKDHEKERDKEKE 319
Query: 205 KERGKGSEMRKGKNVGVD 222
KE+ K E K ++ D
Sbjct: 320 KEQDKDKEREKDRSKETD 337
Score = 50.1 bits (118), Expect = 9e-06
Identities = 72/284 (25%), Positives = 108/284 (37%), Gaps = 53/284 (18%)
Query: 76 DRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRS------RSRERYRDR 129
DR ++ N + K P + + K + R + + S + +S ER R
Sbjct: 135 DRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSNERKGGR 194
Query: 130 DSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRK-RERGREKGRRRSRS 188
SR +RS+ R+S S R R + RSRS + R R R+K R R + ++RS+S
Sbjct: 195 -SRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHN-----RSRSRQKDRRRSKSPHKKRSKS 248
Query: 189 VSPRKQR---RSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKAKMKL 245
RK R RS K D +E+ K ERVK K +
Sbjct: 249 RERRKSRSRSRSRDKRKDTREKVK---------------------------ERVKEKERE 281
Query: 246 QLSETAARDSDRGVGWERFEFNKDAPLDDEEVEGAEDDASLVKHIGQSFRFSAVESKRED 305
+ E R+ DR ER + NKD + E+ E D K + SK D
Sbjct: 282 KERE---REKDREKDKERGK-NKDKDREKEKDHEKERDKEKEKEQDKDKEREKDRSKETD 337
Query: 306 QIQAAHDEAMFGAPAPPPPTSSTDSEPERENEKEVDNKKDLVSS 349
+ + ++ PP S S R +E ++ SS
Sbjct: 338 EKRKKEKKSR------TPPRSYNASRRSRSTSRERRRRRSRSSS 375
Score = 42.4 bits (98), Expect = 0.002
Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 31/162 (19%)
Query: 74 DSDRKSQLQSIQNKLKKKPTTESRVSEKTNR--------DYSSRDSDRRKRRSRSRSRER 125
+ +++ + K + K T E R EK +R SR + R +RR RSRS R
Sbjct: 317 EKEKEQDKDKEREKDRSKETDEKRKKEKKSRTPPRSYNASRRSRSTSRERRRRRSRSSSR 376
Query: 126 Y-----------------RDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDR 168
R R+ + + R +ER+ SDR R+R+R + +S D D
Sbjct: 377 SPRTSKTVKRKSSRSPSPRGRNKKEKKREKERD-HISDR-RERERSTSTKKSSGDRD--- 431
Query: 169 GRDRRKRERGREKGRRRSRSVSPRKQRRSEVKSSD-VKERGK 209
G+++ ++ K + S+ + ++ K S ++ GK
Sbjct: 432 GKEKVEKSTTPVKEKEHSKESDATVSKAADEKGSPRTEDEGK 473
>SFR4_HUMAN (Q08170) Splicing factor, arginine/serine-rich 4
(Pre-mRNA splicing factor SRP75) (SRP001LB)
Length = 494
Score = 68.6 bits (166), Expect = 2e-11
Identities = 67/241 (27%), Positives = 106/241 (43%), Gaps = 25/241 (10%)
Query: 21 AKFKQGLGFSTSTSNDAVPKPGSSLVSSSSFLSQFVKASSSSTTTTASTTAPSDSDRKSQ 80
++ + G S+ + + + + GS S S SQ S S + + +PS +S+
Sbjct: 204 SRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQ-----SRSRSKKEKSRSPSKEKSRSR 258
Query: 81 LQSI-QNKLKKKPTTESRVSEKTN-----RDYSSRDSDRRKRRSRSRSRE-RYRDRDSRR 133
S +++ K K E ++ N SR + K RSRS+ R R S
Sbjct: 259 SHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVS 318
Query: 134 RSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRK 193
R RS+E++ R S R R R + RSRSRS S R RKR R + R RSRS S R
Sbjct: 319 RGRSQEKSLRQS-RSRSRSKGGSRSRSRSRSKSKDKRKGRKRSREESRSRSRSRSKSERS 377
Query: 194 QRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKAKMKLQLSETAAR 253
++R + S K +K K D ++ + +P+ V + + SE++ R
Sbjct: 378 RKRGSKRDS------KAGSSKKKKKEDTDRSQ------SRSPSRSVSKEREHAKSESSQR 425
Query: 254 D 254
+
Sbjct: 426 E 426
Score = 67.8 bits (164), Expect = 4e-11
Identities = 50/147 (34%), Positives = 72/147 (48%), Gaps = 8/147 (5%)
Query: 73 SDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSR 132
S S +SQ + ++ + K+ + R EK+ R SR R K SRSRSR R + +D R
Sbjct: 298 SKSRSRSQERRVEEE-KRGSVSRGRSQEKSLRQ--SRSRSRSKGGSRSRSRSRSKSKDKR 354
Query: 133 R-RSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSP 191
+ R RSRE SR R R + S + S+ DS + ++K + R + R SRSVS
Sbjct: 355 KGRKRSRE-ESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVS- 412
Query: 192 RKQRRSEVKSSDVKERGKGSEMRKGKN 218
+ R KS + G+G G N
Sbjct: 413 --KEREHAKSESSQREGRGESENAGTN 437
Score = 60.1 bits (144), Expect = 9e-09
Identities = 55/200 (27%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 34 SNDAVPKPGSSLVSSSSFLSQFVKASSSSTTTTASTTAPSDSDRKSQLQSI-QNKLKKKP 92
+ND V KP S S S S+ S S S S +SQ +S+ Q++ + +
Sbjct: 279 NNDNVGKPKSR--SPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRS 336
Query: 93 TTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRD 152
SR ++ + R++ R SRSR R R + R R R +R+S+ + +
Sbjct: 337 KGGSRSRSRSRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKK 396
Query: 153 RDSGRSRSRSDS-DVDRGRDRRKRERGREKGR-------------RRSRSVSPRKQRRSE 198
D+ RS+SRS S V + R+ K E + +GR RSRS S K
Sbjct: 397 EDTDRSQSRSPSRSVSKEREHAKSESSQREGRGESENAGTNQETRSRSRSNSKSKPNLPS 456
Query: 199 VKSSDVKERGKGSEMRKGKN 218
S K K K ++
Sbjct: 457 ESRSRSKSASKTRSRSKSRS 476
Score = 58.5 bits (140), Expect = 3e-08
Identities = 69/253 (27%), Positives = 99/253 (38%), Gaps = 42/253 (16%)
Query: 40 KPGSSLVSSSSFLSQFVKASSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVS 99
KPGS S S ++ S S + + S + R +S +K + + + SR S
Sbjct: 176 KPGSRRRRSYS------RSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSR-S 228
Query: 100 EKTNRDYSSRDSDRRKRRSRSRSRERYRDRD-SRRRSRSRERNS------------RYSD 146
+R S S +K +SRS S+E+ R R S +SRS+ ++ +
Sbjct: 229 RSKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKS 288
Query: 147 RDRDRDRDSGRSRSRSDS---------DVDRGRD-----RRKRERGREKG--RRRSRSVS 190
R R + +SRSRS V RGR R+ R R R KG R RSRS S
Sbjct: 289 RSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRS 348
Query: 191 PRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKAKMKLQLSET 250
K +R K S + R + K + G + A K K K +
Sbjct: 349 KSKDKRKGRKRSREESRSRSRSRSKSER------SRKRGSKRDSKAGSSKKKKKEDTDRS 402
Query: 251 AARDSDRGVGWER 263
+R R V ER
Sbjct: 403 QSRSPSRSVSKER 415
Score = 58.2 bits (139), Expect = 3e-08
Identities = 48/151 (31%), Positives = 68/151 (44%), Gaps = 18/151 (11%)
Query: 73 SDSDRKSQLQSIQNKL---KKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDR 129
S SD K L+ + +K E + + R YS R + SRSRSR R+ +
Sbjct: 149 SYSDMKRALEKLDGTEVNGRKIRLVEDKPGSRRRRSYS-----RSRSHSRSRSRSRHSRK 203
Query: 130 DSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSV 189
R S+ +S+ R R R +SRSRS S R R ++++ R K + RSRS
Sbjct: 204 SRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQS---RSRSKKEKSRSPSKEKSRSRSH 260
Query: 190 SPRKQRRSEVKSSDVKERGKGSEMRKGKNVG 220
S K R KS D E +++ NVG
Sbjct: 261 SAGKSRS---KSKDQAE----EKIQNNDNVG 284
Score = 54.3 bits (129), Expect = 5e-07
Identities = 47/141 (33%), Positives = 66/141 (46%), Gaps = 7/141 (4%)
Query: 128 DRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSR 187
D+ RR RS R SR R R R R S +SRSRS S R R R + R +SR
Sbjct: 175 DKPGSRRRRSYSR-SRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSR 233
Query: 188 SVSPRKQRRSEVKS---SDVKERGKGSEMRKGKNVGVDYA-KLIHGYDNMA-PAERVKAK 242
S S + R + KS S K R + K ++ D A + I DN+ P R ++
Sbjct: 234 SRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSR 293
Query: 243 MKLQLSETAARDSDRGVGWER 263
K + S++ +R +R V E+
Sbjct: 294 HKSK-SKSRSRSQERRVEEEK 313
Score = 46.6 bits (109), Expect = 1e-04
Identities = 40/158 (25%), Positives = 67/158 (42%), Gaps = 13/158 (8%)
Query: 57 KASSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKR 116
K S S + + S + RK + +++ + + +E + RD + S ++K+
Sbjct: 337 KGGSRSRSRSRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKK 396
Query: 117 RSRSRSRERYRDRD-SRRRSRSRERNSRYSDRDRDRDRDSG-----RSRSRSDSDVDRGR 170
RS+ R R S+ R ++ +S+ R + + RSRS S S +
Sbjct: 397 EDTDRSQSRSPSRSVSKEREHAKSESSQREGRGESENAGTNQETRSRSRSNSKSKPNLPS 456
Query: 171 DRRKRE------RGREKGRRRSRSVSPRKQR-RSEVKS 201
+ R R R R K R RS S SP + R RS +S
Sbjct: 457 ESRSRSKSASKTRSRSKSRSRSASRSPSRSRSRSHSRS 494
>PPIG_RAT (O55035) Peptidyl-prolyl cis-trans isomerase G (EC
5.2.1.8) (Peptidyl-prolyl isomerase G) (PPIase G)
(Rotamase G) (Cyclophilin G) (Matrin cyclophilin)
(Matrin-cyp)
Length = 752
Score = 68.6 bits (166), Expect = 2e-11
Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 76 DRKSQLQSI---QNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDS- 131
+++ QL S Q + + K ++ S+ D+S R+ +SRSR R+ + + S
Sbjct: 498 EKEKQLDSKGKDQERSRSKENSKQVESKSNEHDHSKSKEKDRRAQSRSRERDLTKSKHSY 557
Query: 132 ----RRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGR-RRS 186
R RSRSR+R+ R R DRD RSRS+ + R R++ R RGR + R RR+
Sbjct: 558 NSRTRERSRSRDRSRRVRSRSHDRD----RSRSK---EYHRYREQEYRRRGRSRSRDRRT 610
Query: 187 RSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKAKMKLQ 246
S K RR + S ER + K K D +K H +N +R+ +K +
Sbjct: 611 PGRSRSKDRRRRRRDSRSSEREESQSRNKEKYRSQD-SKSSHRKENSEGEKRMYSKSRDH 669
Query: 247 LSETAARDSDRGVGWERFEFNKDAPLDDE 275
S R+ + K + D+E
Sbjct: 670 SSSNNNREKKADIDQSPVSKTKQSSQDNE 698
Score = 64.7 bits (156), Expect = 4e-10
Identities = 65/250 (26%), Positives = 97/250 (38%), Gaps = 27/250 (10%)
Query: 57 KASSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKR 116
K S + S S S+ +S + + + + R K+ Y+SR
Sbjct: 508 KDQERSRSKENSKQVESKSNEHDHSKSKEKDRRAQSRSRERDLTKSKHSYNSRT------ 561
Query: 117 RSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGR--DRRK 174
R RSRSR+R R SR R R R+ Y R GRSRSR R R DRR+
Sbjct: 562 RERSRSRDRSRRVRSRSHDRDRSRSKEYHRYREQEYRRRGRSRSRDRRTPGRSRSKDRRR 621
Query: 175 RER-GREKGRRRSRSVSPRKQRRSEVKSSDVKERGKG-------------SEMRKGKNVG 220
R R R R S+S + K R + KSS KE +G S + K
Sbjct: 622 RRRDSRSSEREESQSRNKEKYRSQDSKSSHRKENSEGEKRMYSKSRDHSSSNNNREKKAD 681
Query: 221 VDYAKLI----HGYDNMAPAERVKAKMKLQLSETAARDSDRGVGWER-FEFNKDAPLDDE 275
+D + + DN + +K + + +++ + G E +K+ D E
Sbjct: 682 IDQSPVSKTKQSSQDNEVKSSTLKNQEDEKTRSPVEKENQKSKGQENDHVHDKNKKCDHE 741
Query: 276 EVEGAEDDAS 285
G ++D S
Sbjct: 742 SSPGTDEDKS 751
Score = 57.0 bits (136), Expect = 7e-08
Identities = 77/322 (23%), Positives = 138/322 (41%), Gaps = 29/322 (9%)
Query: 43 SSLVSSSSFLSQFVKASSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKT 102
SS SSSS + SSS ++ + T + S ++ + ++ KK + + S+K+
Sbjct: 193 SSSSSSSSDSDSSSDSQSSSDSSDSETASEEKSRKRKKKHRKNSRKHKKEKKKRKKSKKS 252
Query: 103 NRDYSSRDSDRRKRRSRSRSRE-------RYRDRDSRRRSRSRERNSRYSDRDRDRDRDS 155
S D+ + +S R E R+ R S ++ +ER +R +R+R+ + +
Sbjct: 253 PSSESEADNVDAQPQSTVRPEEIPPIPENRFLMRKSPPKADDKERKNRERERERECNPPN 312
Query: 156 GRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRK 215
+ S + R+ + RG + R SRS S + RRSE +E + MR
Sbjct: 313 SQPASYQRRFLVTRSGRKIKGRGPRRYRTPSRSRSRDRFRRSETPPHWRQEMQRAQRMRV 372
Query: 216 GKN---VGVDYAKLIHGYDNMAPAERVKAKMKLQLSETAARDSDRGVGWERFEFNKDAPL 272
+ D ++L +N RVK K K+ + +RG+ E+ KD L
Sbjct: 373 SSGERWIKGDKSELNEIKENQRSPVRVKEK-KITDHRHMSESPNRGI--EKGGKVKDHKL 429
Query: 273 DDEEVE-----GAED--DASLVKHIGQSFRFS----AVESKREDQIQAAHDEAMFGAPAP 321
+ +E + G +D + + VK G+S S +SK D + H++ +
Sbjct: 430 ESKERDIRRNSGKDDKYNKNKVKKRGKSKSRSKSKERSKSKERDSKHSRHEDKRVRS--- 486
Query: 322 PPPTSSTDSEPERENEKEVDNK 343
+ D E +E EK++D+K
Sbjct: 487 --RSKERDHETTKEKEKQLDSK 506
Score = 55.8 bits (133), Expect = 2e-07
Identities = 59/296 (19%), Positives = 107/296 (35%), Gaps = 45/296 (15%)
Query: 85 QNKLKKKPTTESRVSEKTNRDYSSRDSDRRK---RRSRSRSRERYRDRDSRR-------- 133
+NK+KK+ ++SR K RDS + +R RSRS+ER + +
Sbjct: 448 KNKVKKRGKSKSRSKSKERSKSKERDSKHSRHEDKRVRSRSKERDHETTKEKEKQLDSKG 507
Query: 134 ----RSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRK-------RERGREKG 182
RSRS+E + + + + D + + R R RD K R R R +
Sbjct: 508 KDQERSRSKENSKQVESKSNEHDHSKSKEKDRRAQSRSRERDLTKSKHSYNSRTRERSRS 567
Query: 183 RRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKAK 242
R RSR V R R +S + + R+G++ D P
Sbjct: 568 RDRSRRVRSRSHDRDRSRSKEYHRYREQEYRRRGRS---------RSRDRRTPGRSRSKD 618
Query: 243 MKLQLSETAARDSDRGVGWERFEFNKDAPLDDEEVEGAEDDASLVKHIGQSFRFSAVESK 302
+ + ++ + + + + ++ E +E + + +S S+ +
Sbjct: 619 RRRRRRDSRSSEREESQSRNKEKYRSQDSKSSHRKENSEGEKRM---YSKSRDHSSSNNN 675
Query: 303 REDQI-----------QAAHDEAMFGAPAPPPPTSSTDSEPERENEKEVDNKKDLV 347
RE + Q++ D + + T S E+EN+K + D V
Sbjct: 676 REKKADIDQSPVSKTKQSSQDNEVKSSTLKNQEDEKTRSPVEKENQKSKGQENDHV 731
Score = 52.4 bits (124), Expect = 2e-06
Identities = 46/191 (24%), Positives = 85/191 (44%), Gaps = 20/191 (10%)
Query: 75 SDRKSQLQSIQNKLKKKPTTESRVSEKTNRDY---SSRDSDRRKRRSRSRSRERYRDRDS 131
+D + +S ++K + E RD S +D K + + R + + R + S
Sbjct: 405 TDHRHMSESPNRGIEKGGKVKDHKLESKERDIRRNSGKDDKYNKNKVKKRGKSKSRSK-S 463
Query: 132 RRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSP 191
+ RS+S+ER+S++S + R R + R D + K ++ KG+ + RS S
Sbjct: 464 KERSKSKERDSKHSRHEDKRVRSRSKER-------DHETTKEKEKQLDSKGKDQERSRSK 516
Query: 192 RKQRRSEVKS-----SDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKAKMKLQ 246
++ E KS S KE+ + ++ R + D K H Y N ER +++ + +
Sbjct: 517 ENSKQVESKSNEHDHSKSKEKDRRAQSRSRER---DLTKSKHSY-NSRTRERSRSRDRSR 572
Query: 247 LSETAARDSDR 257
+ + D DR
Sbjct: 573 RVRSRSHDRDR 583
Score = 34.7 bits (78), Expect = 0.40
Identities = 24/78 (30%), Positives = 37/78 (46%), Gaps = 6/78 (7%)
Query: 129 RDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRS 188
++ ++R +S +S S D D DS S SDS+ RKR ++K R+ SR
Sbjct: 185 KEEKKRHKS---SSSSSSSDSDSSSDSQSSSDSSDSETASEEKSRKR---KKKHRKNSRK 238
Query: 189 VSPRKQRRSEVKSSDVKE 206
K++R + K S E
Sbjct: 239 HKKEKKKRKKSKKSPSSE 256
>U2AF_CAEBR (P90727) Splicing factor U2AF 65 kDa subunit (U2
auxiliary factor 65 kDa subunit) (U2 snRNP auxiliary
factor large subunit) (U2AF65)
Length = 488
Score = 68.2 bits (165), Expect = 3e-11
Identities = 47/122 (38%), Positives = 68/122 (55%), Gaps = 9/122 (7%)
Query: 74 DSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRR 133
D ++ L+S+Q +K ++ + + RD RD + RK+R RSRSR+R DRD R+
Sbjct: 18 DVAQRDGLESLQEDVKPDVKSDLNGNGEEKRD---RDDEDRKKRKRSRSRDR-GDRD-RK 72
Query: 134 RSRSRERNSRYSDRDRDRDRDSGRSRSRSD----SDVDRGRDRRKRERGREKGRRRSRSV 189
RSRSR+R R R R+R RD R R+R D D DR R+ ++ + RE + R V
Sbjct: 73 RSRSRDRRDRDRSRSRERRRDRSRDRNRDDRRGGRDDDRRREPQEPAKPREPKKYRFWDV 132
Query: 190 SP 191
P
Sbjct: 133 PP 134
Score = 32.3 bits (72), Expect = 2.0
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 155 SGRSRSRSDSDVDRGRDRRKRERGREKG---RRRSRSVSPRKQRRSEVKS-SDVKERGKG 210
+G + D D D R +RKR R R++G R+RSRS R + RS + + R +
Sbjct: 41 NGNGEEKRDRD-DEDRKKRKRSRSRDRGDRDRKRSRSRDRRDRDRSRSRERRRDRSRDRN 99
Query: 211 SEMRKG 216
+ R+G
Sbjct: 100 RDDRRG 105
>STC_DROME (P40798) Shuttle craft protein
Length = 1106
Score = 67.8 bits (164), Expect = 4e-11
Identities = 51/172 (29%), Positives = 80/172 (45%), Gaps = 12/172 (6%)
Query: 29 FSTSTSNDAVPKPGSSLVSSS-SFLSQFVKASSSSTTTTASTTAPSDSDRKSQLQSIQNK 87
F T N+ S L +S+ F+ F K S T A+T S + L++ N+
Sbjct: 153 FYTPFGNNPFDFSASKLQASAPEFVPNFAKLSLEETPAAATTNGNSTAS----LETAINE 208
Query: 88 LKKKPTTESRVSEK-TNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSD 146
+ + +E+ N S+ + +R + R R R R+R RDRD R R R R+R D
Sbjct: 209 TRPRTLRAQEPAERGANNQCSNHNYERERERERDRDRDRERDRD-RDRDRDRDR-----D 262
Query: 147 RDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQRRSE 198
RDRDRD G +R + SD R+ R R + +++ R + R +R +
Sbjct: 263 RDRDRDSRPGNTRQQRRSDYRDDREDRYERSDRRRPQKQQRYDNHRSNKRRD 314
>PPIG_HUMAN (Q13427) Peptidyl-prolyl cis-trans isomerase G (EC
5.2.1.8) (Peptidyl-prolyl isomerase G) (PPIase G)
(Rotamase G) (Cyclophilin G) (Clk associating
RS-cyclophilin) (CARS-cyclophilin) (CARS-Cyp) (SRcyp)
(CASP10)
Length = 754
Score = 67.8 bits (164), Expect = 4e-11
Identities = 65/210 (30%), Positives = 94/210 (43%), Gaps = 22/210 (10%)
Query: 75 SDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRE--------RY 126
SD K + Q +K ES+ +E D+S S + RR++SRSRE Y
Sbjct: 504 SDSKGKDQERSRSKEKSKQLESKSNE---HDHSK--SKEKDRRAQSRSRECDITKGKHSY 558
Query: 127 RDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDR-RKRERGREKGRRR 185
R +R RSRSR+R+ R R DRDR + R R R R R RER GR R
Sbjct: 559 NSR-TRERSRSRDRSRRVRSRTHDRDRSRSKEYHRYREQEYRRRGRSRSRERRTPPGRSR 617
Query: 186 SRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKAKMKL 245
S+ R++RR + +SS+ +E S+ R +K H +N +R+ +K +
Sbjct: 618 SKD---RRRRRRDSRSSEREE----SQSRNKDKYRNQESKSSHRKENSESEKRMYSKSRD 670
Query: 246 QLSETAARDSDRGVGWERFEFNKDAPLDDE 275
S +R+ F K + DDE
Sbjct: 671 HNSSNNSREKKADRDQSPFSKIKQSSQDDE 700
Score = 57.0 bits (136), Expect = 7e-08
Identities = 68/298 (22%), Positives = 119/298 (39%), Gaps = 48/298 (16%)
Query: 85 QNKLKKKPTTESRVSEKTNRDYSSRDS-----DRRKRRSRSRSR------ERYRDRDSR- 132
+NK+KK+ ++SR K RDS + ++ RSRS+ R E+ + DS+
Sbjct: 449 KNKVKKRAKSKSRSKSKEKSKSKERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQSDSKG 508
Query: 133 ---RRSRSRERNSRYSDRDRDRDRDSG-----RSRSRS-DSDVDRGR-DRRKRERGREKG 182
RSRS+E++ + + + D R++SRS + D+ +G+ R R R +
Sbjct: 509 KDQERSRSKEKSKQLESKSNEHDHSKSKEKDRRAQSRSRECDITKGKHSYNSRTRERSRS 568
Query: 183 RRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKAK 242
R RSR V R R +S + + R+G++ + P R ++K
Sbjct: 569 RDRSRRVRSRTHDRDRSRSKEYHRYREQEYRRRGRS---------RSRERRTPPGRSRSK 619
Query: 243 MKLQLSETAARDSDRGVGWERFEFNKDAPLDDEEVEG--AEDDASLVKHIGQSFRFSAVE 300
+ RDS E NKD + E E+ S + +S ++
Sbjct: 620 DR----RRRRRDSRSSEREESQSRNKDKYRNQESKSSHRKENSESEKRMYSKSRDHNSSN 675
Query: 301 SKREDQI-----------QAAHDEAMFGAPAPPPPTSSTDSEPERENEKEVDNKKDLV 347
+ RE + Q++ D+ + + S E+EN+K + D V
Sbjct: 676 NSREKKADRDQSPFSKIKQSSQDDELKSSMLKNKEDEKIRSSVEKENQKSKGQENDHV 733
Score = 55.8 bits (133), Expect = 2e-07
Identities = 46/189 (24%), Positives = 90/189 (47%), Gaps = 17/189 (8%)
Query: 75 SDRKSQLQSIQNKLKKKPTTESRVSEKTNRDY---SSRDS---DRRKRRSRSRSRERYRD 128
+D ++ +S K +K+ + S RD S +D ++ K+R++S+SR +
Sbjct: 407 TDHRNVSESPNRKNEKEKKVKDHKSNSKERDIRRNSEKDDKYKNKVKKRAKSKSRSK--- 463
Query: 129 RDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRS 188
S+ +S+S+ER+S+++ + R R RS+ R +V +++ K+ + K + RSRS
Sbjct: 464 --SKEKSKSKERDSKHNRNEEKRMR--SRSKGRDHENV---KEKEKQSDSKGKDQERSRS 516
Query: 189 VSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKAKMKLQLS 248
KQ S+ D + + + ++ D K H Y N ER +++ + +
Sbjct: 517 KEKSKQLESKSNEHDHSKSKEKDRRAQSRSRECDITKGKHSY-NSRTRERSRSRDRSRRV 575
Query: 249 ETAARDSDR 257
+ D DR
Sbjct: 576 RSRTHDRDR 584
Score = 52.8 bits (125), Expect = 1e-06
Identities = 50/212 (23%), Positives = 85/212 (39%), Gaps = 7/212 (3%)
Query: 2 EEEKAAAYYDELTRKGEGAAKFKQGLGFSTSTSNDAVPKPGSSLVSSSSFLSQFVKASSS 61
E+EK + + + K KQ L ++ + + K S S K S
Sbjct: 499 EKEKQSDSKGKDQERSRSKEKSKQ-LESKSNEHDHSKSKEKDRRAQSRSRECDITKGKHS 557
Query: 62 STTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSR 121
+ T + D R+ + ++ + ++ R SR +RR RSR
Sbjct: 558 YNSRTRERSRSRDRSRRVRSRTHDRDRSRSKEYHRYREQEYRRRGRSRSRERRTPPGRSR 617
Query: 122 SRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSD---VDRGRDRRKRERG 178
S++R R R R S E SR D+ R+++ S + S+S+ + RD
Sbjct: 618 SKDRRRRRRDSRSSEREESQSRNKDKYRNQESKSSHRKENSESEKRMYSKSRDHNSSNNS 677
Query: 179 REKGRRRSRSVSPRKQRRS---EVKSSDVKER 207
REK R +S + ++ S E+KSS +K +
Sbjct: 678 REKKADRDQSPFSKIKQSSQDDELKSSMLKNK 709
Score = 49.7 bits (117), Expect = 1e-05
Identities = 41/215 (19%), Positives = 95/215 (44%), Gaps = 23/215 (10%)
Query: 74 DSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKR-RSRSRSRERYRDRDSR 132
+S + + +S + + T R ++ + R+ + R+R RSRSR R R
Sbjct: 559 NSRTRERSRSRDRSRRVRSRTHDRDRSRSKEYHRYREQEYRRRGRSRSRERRTPPGRSRS 618
Query: 133 RRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPR 192
+ R R R+SR S+R+ + R+ + R++ R + +R K R + S + R
Sbjct: 619 KDRRRRRRDSRSSEREESQSRNKDKYRNQESKSSHRKENSESEKRMYSKSRDHNSSNNSR 678
Query: 193 KQR--RSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKAKMKLQLSET 250
+++ R + S +K+ + E++ + ++ ++ E++++ ++ + ++
Sbjct: 679 EKKADRDQSPFSKIKQSSQDDELK---------SSMLKNKED----EKIRSSVEKENQKS 725
Query: 251 AARDSDRGVGWERFEFNKDAPLDDEEVEGAEDDAS 285
+++D K+ D E G ++D S
Sbjct: 726 KGQENDH-------VHEKNKKFDHESSPGTDEDKS 753
Score = 45.8 bits (107), Expect = 2e-04
Identities = 47/214 (21%), Positives = 90/214 (41%), Gaps = 29/214 (13%)
Query: 57 KASSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKR 116
K+SSSS+++++ + + SDS S ++ ++K + K +R + ++ +RK+
Sbjct: 192 KSSSSSSSSSSDSDSSSDSQSSSDSSDSESATEEKSKKRKKKHRKNSRKH-KKEKKKRKK 250
Query: 117 RSRSRSRE-------------------------RYRDRDSRRRSRSRERNSRYSDRDRDR 151
+S S E R+ R S ++ +ER +R +R+R+
Sbjct: 251 SKKSASSESEAENLEAQPQSTVRPEEIPPIPENRFLMRKSPPKADEKERKNREREREREC 310
Query: 152 DRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKGS 211
+ + + S + R+ + RG + R SRS S + RRSE +E +
Sbjct: 311 NPPNSQPASYQRRLLVTRSGRKIKGRGPRRYRTPSRSRSRDRFRRSETPPHWRQEMQRAQ 370
Query: 212 EMRKGKN---VGVDYAKLIHGYDNMAPAERVKAK 242
MR + D ++L +N RVK +
Sbjct: 371 RMRVSSGERWIKGDKSELNEIKENQRSPVRVKER 404
Score = 35.8 bits (81), Expect = 0.18
Identities = 22/84 (26%), Positives = 37/84 (43%), Gaps = 5/84 (5%)
Query: 123 RERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKG 182
+ + + + +R S +S SD D D S+S SDS K ++ ++K
Sbjct: 180 KSKVKKEEKKRHKSSSSSSSSSSDSDSSSD-----SQSSSDSSDSESATEEKSKKRKKKH 234
Query: 183 RRRSRSVSPRKQRRSEVKSSDVKE 206
R+ SR K++R + K S E
Sbjct: 235 RKNSRKHKKEKKKRKKSKKSASSE 258
Score = 32.7 bits (73), Expect = 1.5
Identities = 20/125 (16%), Positives = 49/125 (39%)
Query: 80 QLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSRSRE 139
++++ + KP E R+ S+ K+R +S S DS S S+
Sbjct: 153 EIENQKTDAASKPFAEVRILSCGELIPKSKVKKEEKKRHKSSSSSSSSSSDSDSSSDSQS 212
Query: 140 RNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQRRSEV 199
+ ++ R + + ++++KR++ ++ S + + Q +S V
Sbjct: 213 SSDSSDSESATEEKSKKRKKKHRKNSRKHKKEKKKRKKSKKSASSESEAENLEAQPQSTV 272
Query: 200 KSSDV 204
+ ++
Sbjct: 273 RPEEI 277
>SFRC_HUMAN (Q8WXA9) Splicing factor, arginine/serine-rich 12
(Serine-arginine-rich splicing regulatory protein 86)
(SRrp86) (Splicing regulatory protein 508) (SRrp508)
Length = 508
Score = 67.4 bits (163), Expect = 6e-11
Identities = 41/169 (24%), Positives = 87/169 (51%), Gaps = 11/169 (6%)
Query: 59 SSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRS 118
S S T + + +++ S S RK +++ + + + ++ + R R +R+S
Sbjct: 192 SRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKS 251
Query: 119 RSRSRERYRDRDSRRRSRSRER-------NSRYSDRDRDRDRDSGRSRSR-SDSDVDRGR 170
RSRS R + +D+R + + +ER R +++R+++++ G+++ R + + DR +
Sbjct: 252 RSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREK 311
Query: 171 DRRK-RERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKN 218
D+ K RER REK + R K++ E + K+R K + ++ K+
Sbjct: 312 DKEKDREREREKEHEKDRDKEKEKEQDKEKERE--KDRSKEIDEKRKKD 358
Score = 63.5 bits (153), Expect = 8e-10
Identities = 56/240 (23%), Positives = 105/240 (43%), Gaps = 39/240 (16%)
Query: 73 SDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDS- 131
S S + + + + K+K+K + + EK R+ ++ + +++ R +ER +DR+
Sbjct: 253 SRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKD 312
Query: 132 RRRSRSRERNSRYS-DRDRDRDRDSGRSRSRS-----DSDVDRGRD-------------R 172
+ + R RER + DRD++++++ + + R + D R +D R
Sbjct: 313 KEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASR 372
Query: 173 RKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDN 232
R R RE+ RRRSRS S RS S +K + S + +N D
Sbjct: 373 RSRSSSRERRRRRSRSSS-----RSPRTSKTIKRKSSRSPSPRSRN----------KKDK 417
Query: 233 MAPAER--VKAKMKLQLSETAARDSDRGVGWERFEFNKDAPLDDEEVEGAEDDASLVKHI 290
ER + + + + S + + S+ G E+ E N + + E E D+S+ K +
Sbjct: 418 KREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKE--HNKEPDSSVSKEV 475
Score = 62.4 bits (150), Expect = 2e-09
Identities = 50/195 (25%), Positives = 95/195 (48%), Gaps = 14/195 (7%)
Query: 34 SNDAVPKPGSSLVSSSSF----LSQFVKASSSSTTTTASTTAPSDSDRKSQLQSIQNKLK 89
SN+A+ KP +++ + + V+ + S + + ++RK + K
Sbjct: 140 SNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSNERKGGRSRSHTRSK 199
Query: 90 KKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRD-SRRRSRSRER---NSRYS 145
+ +++S K ++ S+ R RSRSR ++R R + ++RS+SRER SR
Sbjct: 200 SRSSSKSHSRRKRSQ---SKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSH 256
Query: 146 DRDRDRD-RDSGRSRSR-SDSDVDRGRDRRK-RERGREKGRRRSRSVSPRKQRRSEVKSS 202
RD+ +D R+ + + R + D ++ R+R K RE+ +E+G+ + R K R + +
Sbjct: 257 SRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKD 316
Query: 203 DVKERGKGSEMRKGK 217
+ER K E + K
Sbjct: 317 REREREKEHEKDRDK 331
Score = 49.7 bits (117), Expect = 1e-05
Identities = 69/285 (24%), Positives = 112/285 (39%), Gaps = 37/285 (12%)
Query: 76 DRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRS------RSRERYRDR 129
DR ++ N + K P + + K + R + + S + +S ER R
Sbjct: 132 DRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSNERKGGR 191
Query: 130 DSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRK-RERGREKGRRRSRS 188
SR +RS+ R+S S R R + RSRS + R R R+K R R + ++RS+S
Sbjct: 192 -SRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHN-----RSRSRQKDRRRSKSPHKKRSKS 245
Query: 189 VSPRKQR---RSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKAKMK- 244
RK R S K D +E+ K E K K D ER K + K
Sbjct: 246 RERRKSRSRSHSRDKRKDTREKIKEKERVKEK-------------DREKEREREKEREKE 292
Query: 245 LQLSETAARDSDRGVGWERFEFNKDAPLDDEEVEGAEDDASLVKHIGQSFRFSAVESKRE 304
+ + RD +R E+ +K+ + E + E D K Q + + +
Sbjct: 293 KERGKNKDRDKEREKDREK---DKEKDREREREKEHEKDRDKEKEKEQ----DKEKEREK 345
Query: 305 DQIQAAHDEAMFGAPAPPPPTSSTDSEPERENEKEVDNKKDLVSS 349
D+ + ++ + PP S S R + +E ++ SS
Sbjct: 346 DRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSS 390
Score = 47.8 bits (112), Expect = 5e-05
Identities = 48/168 (28%), Positives = 72/168 (42%), Gaps = 30/168 (17%)
Query: 74 DSDRKSQLQSIQNKLKKKPTTESR-VSEKTNRDYSSRDSDRR---KRRSRSRSRERYRDR 129
+ DR + + Q+K K++ S+ + EK +D SR R RRSRS SRER R R
Sbjct: 326 EKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRR 385
Query: 130 D-------------SRRRSRS---RERNSRYSDRDRDRDRDSGR-SRSRSDSDVDRGRDR 172
R+ SRS R RN + R+++RD S R R RS S DR
Sbjct: 386 SRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDR 445
Query: 173 RKRER---------GREKGRRRSRSVSPRKQRRSEVKSSDVKERGKGS 211
+E+ +E + SVS + ++ + K + G+
Sbjct: 446 DGKEKLEKNSTSLKEKEHNKEPDSSVSKEVDDKDAPRTEENKIQHNGN 493
Score = 40.8 bits (94), Expect = 0.006
Identities = 33/123 (26%), Positives = 60/123 (47%), Gaps = 9/123 (7%)
Query: 59 SSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRD--SDRRKR 116
SSS + + S S R S+ +I+ K + P+ SR ++K + RD S+RR+R
Sbjct: 376 SSSRERRRRRSRSSSRSPRTSK--TIKRKSSRSPSPRSR-NKKDKKREKERDHISERRER 432
Query: 117 RSRSRSRERYRDRDSRRRSRSRERNS-RYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKR 175
+ R+ DRD + + E+NS +++ +++ DS S+ D D R + + +
Sbjct: 433 ERSTSMRKSSNDRDGKEK---LEKNSTSLKEKEHNKEPDSSVSKEVDDKDAPRTEENKIQ 489
Query: 176 ERG 178
G
Sbjct: 490 HNG 492
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.307 0.123 0.329
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,862,227
Number of Sequences: 164201
Number of extensions: 1769517
Number of successful extensions: 26458
Number of sequences better than 10.0: 1205
Number of HSP's better than 10.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 699
Number of HSP's that attempted gapping in prelim test: 11494
Number of HSP's gapped (non-prelim): 5966
length of query: 369
length of database: 59,974,054
effective HSP length: 112
effective length of query: 257
effective length of database: 41,583,542
effective search space: 10686970294
effective search space used: 10686970294
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 66 (30.0 bits)
Medicago: description of AC146914.1