BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146856.7 + phase: 0
(241 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CGD3_ARATH (P42753) Cyclin delta-3 120 3e-27
CGD1_ARATH (P42751) Cyclin delta-1 115 7e-26
CGD2_ARATH (P42752) Cyclin delta-2 110 4e-24
CGS5_YEAST (P30283) S-phase entry cyclin 5 75 1e-13
CG2B_MEDVA (P46278) G2/mitotic-specific cyclin 2 (B-like cyclin)... 73 7e-13
CG2B_MEDSA (P30278) G2/mitotic-specific cyclin 2 (B-like cyclin)... 73 7e-13
CG22_SOYBN (P25012) G2/mitotic-specific cyclin S13-7 (B-like cyc... 70 5e-12
CG24_YEAST (P24871) G2/mitotic-specific cyclin 4 69 8e-12
CG21_SOYBN (P25011) G2/mitotic-specific cyclin S13-6 (B-like cyc... 68 2e-11
CG2A_CHLVR (P51986) G2/mitotic-specific cyclin A (Fragment) 67 3e-11
CGA2_XENLA (P47827) Cyclin A2 67 4e-11
CG2B_ARATH (P30183) G2/mitotic-specific cyclin (B-like cyclin) 67 4e-11
CGB2_RANJA (O93229) G2/mitotic-specific cyclin B2 65 1e-10
CG22_ANTMA (P34801) G2/mitotic-specific cyclin 2 65 1e-10
CG2B_ORYSA (Q40671) G2/mitotic-specific cyclin 2 (B-like cyclin)... 65 2e-10
CGS6_YEAST (P32943) S-phase entry cyclin 6 64 2e-10
CGB2_HUMAN (O95067) G2/mitotic-specific cyclin B2 64 2e-10
CG22_YEAST (P24869) G2/mitotic-specific cyclin 2 64 2e-10
CGB2_XENLA (P13351) G2/mitotic-specific cyclin B2 64 3e-10
CG1B_MEDVA (P46277) G2/mitotic-specific cyclin 1 (B-like cyclin)... 64 3e-10
>CGD3_ARATH (P42753) Cyclin delta-3
Length = 376
Score = 120 bits (301), Expect = 3e-27
Identities = 77/213 (36%), Positives = 113/213 (52%), Gaps = 35/213 (16%)
Query: 9 FSLSSLMCHEQDESTLIFEEDEDESTFFINSSLDNNNNNPWFLLDD----EEEYIQYLFK 64
F L +L C E+ + D++ NSSL +++++P+ +L E+E + LF
Sbjct: 17 FLLDALYCEEE-------KWDDEGEEVEENSSL-SSSSSPFVVLQQDLFWEDEDLVTLFS 68
Query: 65 QETGLGFGSITHFLCYDDHDVEVEDDDSSKSLFWLRNARLHAIDWIFNTQAKFGFTVQTA 124
+E G C DD +L R A+ WI A +GF+ A
Sbjct: 69 KEEEQGLS------CLDD--------------VYLSTDRKEAVGWILRVNAHYGFSTLAA 108
Query: 125 YLSINYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKMEEQSVPPLSEYPIE---YRFEN 181
L+I Y D+F+ S+ KPW +QL+SVACLS+AAK+EE VP L ++ +E Y FE
Sbjct: 109 VLAITYLDKFICSYSLQRDKPWMLQLVSVACLSLAAKVEETQVPLLLDFQVEETKYVFEA 168
Query: 182 KVIKNMELLILSTLEWKMGLPTPFAYLHYFFTK 214
K I+ MELLILSTLEWKM L TP +++ + +
Sbjct: 169 KTIQRMELLILSTLEWKMHLITPISFVDHIIRR 201
>CGD1_ARATH (P42751) Cyclin delta-1
Length = 335
Score = 115 bits (289), Expect = 7e-26
Identities = 62/141 (43%), Positives = 91/141 (63%), Gaps = 4/141 (2%)
Query: 101 NARLHAIDWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSIAA 160
+AR ++ WI QA + F TAYL++NY DRFL R + E+ W +QLL+VACLS+AA
Sbjct: 80 SAREDSVAWILKVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQLLAVACLSLAA 139
Query: 161 KMEEQSVPPLSEYP---IEYRFENKVIKNMELLILSTLEWKMGLPTPFAYLHYFFTKF-C 216
KMEE VP L ++ ++Y FE K IK MELL+LS L+W++ TPF ++ +F K
Sbjct: 140 KMEEILVPSLFDFQVAGVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFDFISFFAYKIDP 199
Query: 217 NGSRSETIITKATQHIVTMVK 237
+G+ I+ AT+ I++ +K
Sbjct: 200 SGTFLGFFISHATEIILSNIK 220
>CGD2_ARATH (P42752) Cyclin delta-2
Length = 361
Score = 110 bits (274), Expect = 4e-24
Identities = 76/238 (31%), Positives = 121/238 (49%), Gaps = 21/238 (8%)
Query: 13 SLMCHEQDESTLIFEEDEDESTFFINSSLDNNNNNPWFLLDDE---EEYIQYLFKQETGL 69
+L C E ES +I + D+D+ + + + + N+ F DD I + + L
Sbjct: 4 NLACGETSESWII-DNDDDDINYGGGFTNEIDYNHQLFAKDDNFGGNGSIPMMGSSSSSL 62
Query: 70 GFGSITHFLCYD-------DHDVEVEDDDSSKSLFWLRNARLHAIDWIFNTQAKFGFTVQ 122
I L + D+ + D S+ R A+DWI A + F
Sbjct: 63 SEDRIKEMLVREIEFCPGTDYVKRLLSGDLDLSV------RNQALDWILKVCAHYHFGHL 116
Query: 123 TAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKMEEQSVPPLSEYPIE---YRF 179
LS+NY DRFL+ + + K WA QLL+V+CLS+A+KMEE VP + + +E + F
Sbjct: 117 CICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFVF 176
Query: 180 ENKVIKNMELLILSTLEWKMGLPTPFAYLHYFFTKFCNGSRSETIITKATQHIVTMVK 237
E K IK MELL+++TL W++ TPF+++ YF K +G SE +I ++++ I+ K
Sbjct: 177 EAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKI-SGHVSENLIYRSSRFILNTTK 233
>CGS5_YEAST (P30283) S-phase entry cyclin 5
Length = 435
Score = 75.1 bits (183), Expect = 1e-13
Identities = 45/117 (38%), Positives = 68/117 (57%), Gaps = 6/117 (5%)
Query: 95 SLFWLR-NARLHAIDWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSV 153
S ++LR + R +DW+ KF +T +LSIN DRFL+K + +K +QLL+V
Sbjct: 189 SKYYLRPSMRTILVDWLVEVHEKFQCYPETLFLSINLMDRFLAKNKVTMNK---LQLLAV 245
Query: 154 ACLSIAAKMEEQSVPPLSEYP--IEYRFENKVIKNMELLILSTLEWKMGLPTPFAYL 208
L IAAK EE ++P L+EY + IKN E+ +L++LE+ +G P P +L
Sbjct: 246 TSLFIAAKFEEVNLPKLAEYAYITDGAASKNDIKNAEMFMLTSLEFNIGWPNPLNFL 302
>CG2B_MEDVA (P46278) G2/mitotic-specific cyclin 2 (B-like cyclin)
(CycMs2)
Length = 434
Score = 72.8 bits (177), Expect = 7e-13
Identities = 40/115 (34%), Positives = 67/115 (57%), Gaps = 7/115 (6%)
Query: 101 NARLHAI--DWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSI 158
N R+ AI DW+ KF +T +L++N DRFL+K+++ K +QL+ + + +
Sbjct: 205 NERMRAILVDWLIEVHDKFDLMQETLFLTVNLIDRFLAKQNVVRKK---LQLVGLVAMLL 261
Query: 159 AAKMEEQSVPPLSE--YPIEYRFENKVIKNMELLILSTLEWKMGLPTPFAYLHYF 211
A K EE SVP +S+ + + + K I ME L+L+TL++ M LPT + ++ F
Sbjct: 262 ACKYEEVSVPVVSDLIHIADRAYTRKDILEMEKLMLNTLQYNMSLPTAYVFMRRF 316
>CG2B_MEDSA (P30278) G2/mitotic-specific cyclin 2 (B-like cyclin)
(CycMs2) (Fragment)
Length = 328
Score = 72.8 bits (177), Expect = 7e-13
Identities = 40/115 (34%), Positives = 67/115 (57%), Gaps = 7/115 (6%)
Query: 101 NARLHAI--DWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSI 158
N R+ AI DW+ KF +T +L++N DRFL+K+++ K +QL+ + + +
Sbjct: 99 NERMRAILVDWLIEVHDKFDLMQETLFLTVNLIDRFLAKQNVVRKK---LQLVGLVAMLL 155
Query: 159 AAKMEEQSVPPLSE--YPIEYRFENKVIKNMELLILSTLEWKMGLPTPFAYLHYF 211
A K EE SVP +S+ + + + K I ME L+L+TL++ M LPT + ++ F
Sbjct: 156 ACKYEEVSVPVVSDLIHIADRAYTRKDILEMEKLMLNTLQYNMSLPTAYVFMRRF 210
>CG22_SOYBN (P25012) G2/mitotic-specific cyclin S13-7 (B-like
cyclin) (Fragment)
Length = 257
Score = 70.1 bits (170), Expect = 5e-12
Identities = 38/115 (33%), Positives = 69/115 (59%), Gaps = 7/115 (6%)
Query: 101 NARLHAI--DWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSI 158
N R+ AI DW+ + KF +++T YL+IN DRFL+ +++ + +QL+ ++ + +
Sbjct: 26 NERMRAILVDWLIDVHTKFELSLETLYLTINIIDRFLAVKTVPRRE---LQLVGISAMLM 82
Query: 159 AAKMEEQSVPPLSEYPI--EYRFENKVIKNMELLILSTLEWKMGLPTPFAYLHYF 211
A+K EE P ++++ + + ++ I ME IL+ LEW + +PTPF +L F
Sbjct: 83 ASKYEEIWPPEVNDFVCLSDRAYTHEQILAMEKTILNKLEWTLTVPTPFVFLVRF 137
>CG24_YEAST (P24871) G2/mitotic-specific cyclin 4
Length = 460
Score = 69.3 bits (168), Expect = 8e-12
Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 29/221 (13%)
Query: 11 LSSLMCHEQDESTLIFEEDEDESTFFINSSLDNNNNNPWFLLDDEEEYIQYLFKQETGLG 70
LS + +Q ++ ++E+ + E I +D+ P ++++E IQ +
Sbjct: 130 LSRRVNDQQIQADEVYEDFDGEMQDVIEEDVDSQIE-PLSPINNDE--IQTELDRAFEKY 186
Query: 71 FGSITHFLCYDDHDVEVEDDDSSKSLFWLRNA---------------------RLHAIDW 109
F S+ + L D HDV + + +S ++LR R IDW
Sbjct: 187 FRSVPNPLDDDTHDVVMVVEYASDIFYYLRELEVKYRPNPYYMQNQVELTWPFRRTMIDW 246
Query: 110 IFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKMEEQSVPP 169
+ +F +T YL+IN DRFLSK+++ ++ QL+ V+ L IAAK EE + P
Sbjct: 247 LVQLHFRFQLLPETLYLTINIVDRFLSKKTVTLNR---FQLVGVSALFIAAKFEEINCPT 303
Query: 170 LSE--YPIEYRFENKVIKNMELLILSTLEWKMGLPTPFAYL 208
L + Y +E + I E ++ TLE+++G P P +L
Sbjct: 304 LDDLVYMLENTYTRDDIIRAEQYMIDTLEFEIGWPGPMPFL 344
>CG21_SOYBN (P25011) G2/mitotic-specific cyclin S13-6 (B-like
cyclin)
Length = 454
Score = 68.2 bits (165), Expect = 2e-11
Identities = 37/115 (32%), Positives = 68/115 (58%), Gaps = 7/115 (6%)
Query: 101 NARLHAI--DWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSI 158
N R+ AI DW+ + KF +++T YL+IN DRFL+ +++ + +QL+ ++ + +
Sbjct: 222 NERMRAILVDWLIDVHTKFELSLETLYLTINIIDRFLAVKTVPRRE---LQLVGISAMLM 278
Query: 159 AAKMEEQSVPPLSEYPI--EYRFENKVIKNMELLILSTLEWKMGLPTPFAYLHYF 211
A+K EE P ++++ + + ++ I ME IL+ LEW + +PTP +L F
Sbjct: 279 ASKYEEIWPPEVNDFVCLSDRAYTHEHILTMEKTILNKLEWTLTVPTPLVFLVRF 333
>CG2A_CHLVR (P51986) G2/mitotic-specific cyclin A (Fragment)
Length = 420
Score = 67.4 bits (163), Expect = 3e-11
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
Query: 107 IDWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKMEEQS 166
IDW+ ++ QT YLS++Y DRFLS S+ K +QL+ AC+ +AAK EE
Sbjct: 202 IDWLVEVSEEYKLIPQTLYLSVSYIDRFLSHMSVLRGK---LQLVGAACMLVAAKFEEIY 258
Query: 167 VPPLSE--YPIEYRFENKVIKNMELLILSTLEWKMGLPT 203
P ++E Y + + K + ME LIL TL + + +PT
Sbjct: 259 PPEVAEFVYITDDTYTAKQVLRMEHLILKTLAFDLSVPT 297
>CGA2_XENLA (P47827) Cyclin A2
Length = 415
Score = 67.0 bits (162), Expect = 4e-11
Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 101 NARLHAIDWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSIAA 160
N R +DW+ ++ +T YL++NY DRFLS S+ K +QL+ A + +A+
Sbjct: 191 NMRAILVDWLVEVGEEYKLQNETLYLAVNYIDRFLSSMSVLRGK---LQLVGTAAMLLAS 247
Query: 161 KMEEQSVPPLSE--YPIEYRFENKVIKNMELLILSTLEWKMGLPTPFAYLHYFF 212
K EE P ++E Y + + K + ME L+L L + + PT YL+ +F
Sbjct: 248 KFEEIYPPEVAEFVYITDDTYTKKQVLKMEHLVLKVLSFDLAAPTILQYLNQYF 301
>CG2B_ARATH (P30183) G2/mitotic-specific cyclin (B-like cyclin)
Length = 428
Score = 67.0 bits (162), Expect = 4e-11
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 5/125 (4%)
Query: 103 RLHAIDWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKM 162
RL ++W+ + +F +T YL++N DRFLS + + + +QL+ ++ L ++AK
Sbjct: 197 RLILVEWLIDVHVRFELNPETFYLTVNILDRFLSVKPVPRKE---LQLVGLSALLMSAKY 253
Query: 163 EEQSVPPLSEYP--IEYRFENKVIKNMELLILSTLEWKMGLPTPFAYLHYFFTKFCNGSR 220
EE P + + ++ + +K I ME ILSTLEW + +PT + +L F +
Sbjct: 254 EEIWPPQVEDLVDIADHAYSHKQILVMEKTILSTLEWYLTVPTHYVFLARFIKASIADEK 313
Query: 221 SETII 225
E ++
Sbjct: 314 MENMV 318
>CGB2_RANJA (O93229) G2/mitotic-specific cyclin B2
Length = 392
Score = 65.5 bits (158), Expect = 1e-10
Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 101 NARLHAI--DWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSI 158
N R+ AI DW+ ++F F +T Y+ I DRFL + I K +QL+ V L +
Sbjct: 157 NERMRAILVDWLIQVNSRFQFLQETLYMGIAIMDRFLQVQPISRGK---LQLVGVTSLLL 213
Query: 159 AAKMEEQSVPPLSE--YPIEYRFENKVIKNMELLILSTLEWKMGLPTPFAYLHYFFTKFC 216
A+K EE P +++ Y + + I+ ME++IL L++ +G P P +L +K C
Sbjct: 214 ASKYEEMYSPEVADFAYITDNAYTTSQIREMEMIILRELKFDLGRPLPLHFLRR-ASKAC 272
Query: 217 NGSRSETIITKATQHIVTMVKGNIH 241
+ + + K + + +H
Sbjct: 273 SADAEQHTLAKYLMELTLVDYEMVH 297
>CG22_ANTMA (P34801) G2/mitotic-specific cyclin 2
Length = 441
Score = 65.1 bits (157), Expect = 1e-10
Identities = 35/107 (32%), Positives = 60/107 (55%), Gaps = 5/107 (4%)
Query: 107 IDWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKMEEQS 166
IDW+ KF + +T YL+IN DR+L+ ++ + +QLL ++ + IA+K EE
Sbjct: 225 IDWLVQVHYKFELSPETLYLTINIVDRYLASKTTSRRE---LQLLGMSSMLIASKYEEIW 281
Query: 167 VPPLSEYPI--EYRFENKVIKNMELLILSTLEWKMGLPTPFAYLHYF 211
P +++ + + N+ + ME IL LEW + +PTP+ +L F
Sbjct: 282 APEVNDLVCISDGSYSNEQVLRMEKKILGALEWYLTVPTPYVFLVRF 328
>CG2B_ORYSA (Q40671) G2/mitotic-specific cyclin 2 (B-like cyclin)
(CycOs2)
Length = 419
Score = 64.7 bits (156), Expect = 2e-10
Identities = 33/107 (30%), Positives = 60/107 (55%), Gaps = 5/107 (4%)
Query: 107 IDWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKMEEQS 166
IDW+ K +T +L++N DRFL++ ++ K +QL+ V + +A K EE S
Sbjct: 199 IDWLIEVHYKLELLDETLFLTVNIIDRFLARENVVRKK---LQLVGVTAMLLACKYEEVS 255
Query: 167 VPPLSEYPI--EYRFENKVIKNMELLILSTLEWKMGLPTPFAYLHYF 211
VP + + + + + I ME +I++TL++ M +PTP+ ++ F
Sbjct: 256 VPVVEDLILICDRAYTRTDILEMERMIVNTLQFDMSVPTPYCFMRRF 302
>CGS6_YEAST (P32943) S-phase entry cyclin 6
Length = 380
Score = 64.3 bits (155), Expect = 2e-10
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 107 IDWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKMEEQS 166
IDW+ KF +T +L+IN DRFLS+ + +K +QLL + CL IA K EE
Sbjct: 160 IDWLVEVHEKFHCLPETLFLAINLLDRFLSQNVVKLNK---LQLLCITCLFIACKFEEVK 216
Query: 167 VPPLSE--YPIEYRFENKVIKNMELLILSTLEWKMGLPTPFAYL 208
+P ++ Y + + I+ EL +LS+L + + LP P ++
Sbjct: 217 LPKITNFAYVTDGAATVEGIRKAELFVLSSLGYNISLPNPLNFI 260
>CGB2_HUMAN (O95067) G2/mitotic-specific cyclin B2
Length = 398
Score = 64.3 bits (155), Expect = 2e-10
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 27/173 (15%)
Query: 41 LDNNN-NNPWFLLDDEEEYIQYLFKQETGLGFGSITHFLCYDDHDVEVEDDDSSKSLFWL 99
+DN + NP D ++ QYL + E HFL D D+
Sbjct: 120 IDNEDWENPQLCSDYVKDIYQYLRQLEVLQSINP--HFL--DGRDI-------------- 161
Query: 100 RNARLHAI--DWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLS 157
N R+ AI DW+ +KF +T Y+ + DRFL + + K +QL+ + L
Sbjct: 162 -NGRMRAILVDWLVQVHSKFRLLQETLYMCVGIMDRFLQVQPVSRKK---LQLVGITALL 217
Query: 158 IAAKMEEQSVPPLSE--YPIEYRFENKVIKNMELLILSTLEWKMGLPTPFAYL 208
+A+K EE P + + Y + + + I+ ME LIL L++++G P P +L
Sbjct: 218 LASKYEEMFSPNIEDFVYITDNAYTSSQIREMETLILKELKFELGRPLPLHFL 270
>CG22_YEAST (P24869) G2/mitotic-specific cyclin 2
Length = 491
Score = 64.3 bits (155), Expect = 2e-10
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 8/131 (6%)
Query: 83 HDVEVEDDDSSKSLFWLRNARLHA---IDWIFNTQAKFGFTVQTAYLSINYFDRFLSKRS 139
H +EV + L+ RN + ++W+ KFG +T YL+IN DRFL K
Sbjct: 238 HQLEVITLPKKEDLYQHRNIHQNRDILVNWLVKIHNKFGLLPETLYLAINIMDRFLGKEL 297
Query: 140 IDESKPWAIQLLSVACLSIAAKMEEQSVPPLSEYPIEY--RFENKVIKNMELLILSTLEW 197
+ K +QL+ +CL IA+K EE P + + E IK E IL TL++
Sbjct: 298 VQLDK---LQLVGTSCLFIASKYEEVYSPSIKHFASETDGACTEDEIKEGEKFILKTLKF 354
Query: 198 KMGLPTPFAYL 208
+ P P +L
Sbjct: 355 NLNYPNPMNFL 365
>CGB2_XENLA (P13351) G2/mitotic-specific cyclin B2
Length = 392
Score = 63.9 bits (154), Expect = 3e-10
Identities = 40/145 (27%), Positives = 70/145 (47%), Gaps = 8/145 (5%)
Query: 101 NARLHAI--DWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSI 158
N R+ AI DW+ ++F +T Y+ + DRFL + + SK +QL+ V L I
Sbjct: 159 NERMRAILVDWLVQVHSRFQLLQETLYMGVAIMDRFLQVQPVSRSK---LQLVGVTSLLI 215
Query: 159 AAKMEEQSVPPLSE--YPIEYRFENKVIKNMELLILSTLEWKMGLPTPFAYLHYFFTKFC 216
A+K EE P +++ Y + + I+ ME++IL L + +G P P +L +K C
Sbjct: 216 ASKYEEMYTPEVADFVYITDNAYTASQIREMEMIILRLLNFDLGRPLPLHFLRR-ASKSC 274
Query: 217 NGSRSETIITKATQHIVTMVKGNIH 241
+ + + K + + +H
Sbjct: 275 SADAEQHTLAKYLMELTLIDYEMVH 299
>CG1B_MEDVA (P46277) G2/mitotic-specific cyclin 1 (B-like cyclin)
(CycMs1)
Length = 428
Score = 63.9 bits (154), Expect = 3e-10
Identities = 34/115 (29%), Positives = 64/115 (55%), Gaps = 7/115 (6%)
Query: 101 NARLHAI--DWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSI 158
N R+ AI DW+ KF +T +L++N DRFL K+S+ K +QL+ + + +
Sbjct: 201 NERMRAILVDWLIEVHDKFDLMHETLFLTVNLIDRFLEKQSVVRKK---LQLVGLVAMLL 257
Query: 159 AAKMEEQSVPPLSEYPI--EYRFENKVIKNMELLILSTLEWKMGLPTPFAYLHYF 211
A K EE SVP + + + + + K + ME ++++ L++ + +PT + ++ F
Sbjct: 258 ACKYEEVSVPVVGDLILISDRAYTRKEVLEMEKVMVNALKFNISVPTAYVFMRRF 312
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.320 0.136 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,797,452
Number of Sequences: 164201
Number of extensions: 1218378
Number of successful extensions: 4153
Number of sequences better than 10.0: 137
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 3929
Number of HSP's gapped (non-prelim): 145
length of query: 241
length of database: 59,974,054
effective HSP length: 107
effective length of query: 134
effective length of database: 42,404,547
effective search space: 5682209298
effective search space used: 5682209298
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Medicago: description of AC146856.7