BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146853.5 - phase: 0 /pseudo
(235 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ELF1_DROME (P13002) Protein grainy-head (DNA-binding protein ELF... 38 0.024
RNGB_DICDI (Q7M3S9) Ring finger protein B (Protein rngB) 37 0.053
P3K2_DICDI (P54674) Phosphatidylinositol 3-kinase 2 (EC 2.7.1.13... 36 0.069
PTP3_DICDI (P54637) Protein-tyrosine phosphatase 3 (EC 3.1.3.48)... 36 0.090
OPAP_DROME (P23488) DROMSOPA protein 36 0.090
ENC_DROME (Q8MSX1) Encore protein 35 0.12
ABRU_DROME (Q24174) Abrupt protein (Clueless protein) 35 0.12
PUM_DROME (P25822) Maternal pumilio protein 35 0.15
HMCA_DROME (P09085) Homeotic caudal protein 35 0.15
HMAN_DROSU (Q24645) Homeotic antennapedia protein 35 0.20
DRPL_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrop... 35 0.20
SIMA_DROME (Q24167) Similar protein 34 0.26
SPEN_DROME (Q8SX83) Split ends protein 34 0.34
LB27_ARATH (Q9STS6) Putative LOB domain protein 27 34 0.34
DRPL_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atr... 34 0.34
P3K3_DICDI (P54675) Phosphatidylinositol 3-kinase 3 (EC 2.7.1.13... 33 0.45
KCA1_RABIT (Q9BG98) Calcium-activated potassium channel alpha su... 33 0.45
HMDF_DROME (P07548) Homeotic deformed protein 33 0.45
GBF_DICDI (P36417) G-box binding factor (GBF) 33 0.45
CCF_DROME (P41046) Centrosomal and chromosomal factor (CCF) (Chr... 33 0.45
>ELF1_DROME (P13002) Protein grainy-head (DNA-binding protein ELF-1)
(Element I-binding activity) (Transcription factor
NTF-1)
Length = 1333
Score = 37.7 bits (86), Expect = 0.024
Identities = 18/64 (28%), Positives = 25/64 (38%)
Query: 22 HHQQNQNQNQNQNQPISHDHNSNHSLPSSASLSVGFGIFPLLTATPCMPQQQSQNNEVQE 81
HHQQ Q Q Q Q Q H P + G G + ++ QQQ Q ++
Sbjct: 463 HHQQQQQQQQQQQQQQQQQHQQQQQHPGDIVSAAGVGSTGSIVSSAAQQQQQQQLISIKR 522
Query: 82 NPSN 85
P +
Sbjct: 523 EPED 526
Score = 30.8 bits (68), Expect = 2.9
Identities = 26/119 (21%), Positives = 48/119 (39%), Gaps = 6/119 (5%)
Query: 17 SSLQHHHQQNQNQNQNQNQPISHDHNSNHSLPSSASLSVGFGIFPL----LTATPCMPQQ 72
+S+ HH QQ Q Q Q+Q Q H+ S S G G PL +TA
Sbjct: 742 TSVHHHQQQQQQQQQHQQQQQQQQHHQQQQHHSQDGKSNG-GATPLYAKAITAAGLTVDL 800
Query: 73 QSQNNEVQENPSNNNNFWNLRMCPEVVNLPKKGVITEEENHGKIAMME-SEENGVYGSE 130
S ++ + + + N++ + L + G + + +++ + V+GS+
Sbjct: 801 PSPDSGIGTDAITPRDQTNIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQRTAVHGSQ 859
>RNGB_DICDI (Q7M3S9) Ring finger protein B (Protein rngB)
Length = 943
Score = 36.6 bits (83), Expect = 0.053
Identities = 24/78 (30%), Positives = 36/78 (45%), Gaps = 19/78 (24%)
Query: 15 SPSSLQHHHQQNQ----NQNQNQNQPISHDHNSNHSLPSSASLSVGFGIFPLLTATPCMP 70
S SSL +Q +Q NQNQNQN ++++N+N+++ T T
Sbjct: 389 STSSLASSYQSSQSLQFNQNQNQNNNNNNNNNNNNNIQ---------------TTTTTTT 433
Query: 71 QQQSQNNEVQENPSNNNN 88
+ NN N +NNNN
Sbjct: 434 NNNNNNNNNNNNNNNNNN 451
>P3K2_DICDI (P54674) Phosphatidylinositol 3-kinase 2 (EC 2.7.1.137)
(PI3-kinase) (PtdIns-3-kinase) (PI3K)
Length = 1858
Score = 36.2 bits (82), Expect = 0.069
Identities = 17/68 (25%), Positives = 36/68 (52%)
Query: 21 HHHQQNQNQNQNQNQPISHDHNSNHSLPSSASLSVGFGIFPLLTATPCMPQQQSQNNEVQ 80
+++ N N N N N ++++N+N++ ++ S + + ++ P S +N+ Q
Sbjct: 198 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTSTTTTTTSILISSSPPPSSSSSSSSNDEQ 257
Query: 81 ENPSNNNN 88
N +NNNN
Sbjct: 258 FNNNNNNN 265
Score = 36.2 bits (82), Expect = 0.069
Identities = 17/68 (25%), Positives = 35/68 (51%)
Query: 21 HHHQQNQNQNQNQNQPISHDHNSNHSLPSSASLSVGFGIFPLLTATPCMPQQQSQNNEVQ 80
+++ N N N N N ++++N+N++ ++++ + I + P S N+E
Sbjct: 199 NNNNNNNNNNNNNNNNNNNNNNNNNNNNTTSTTTTTTSILISSSPPPSSSSSSSSNDEQF 258
Query: 81 ENPSNNNN 88
N +NNNN
Sbjct: 259 NNNNNNNN 266
>PTP3_DICDI (P54637) Protein-tyrosine phosphatase 3 (EC 3.1.3.48)
(Protein-tyrosine-phosphate phosphohydrolase 3)
Length = 989
Score = 35.8 bits (81), Expect = 0.090
Identities = 24/78 (30%), Positives = 34/78 (42%), Gaps = 9/78 (11%)
Query: 20 QHHHQQNQNQNQNQNQPISHDHNSNHSLPSSASLSVGF-GIF--------PLLTATPCMP 70
Q QQ Q +N Q SH N+N++ ++ S GF G F T + C
Sbjct: 884 QQQQQQQQQKNNQQCSGFSHFLNNNNNNDNNGSSGGGFNGSFLFNSNNSGSSSTNSECSN 943
Query: 71 QQQSQNNEVQENPSNNNN 88
++ NN N +NNNN
Sbjct: 944 NNKNNNNNSNNNNNNNNN 961
Score = 33.9 bits (76), Expect = 0.34
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 25 QNQNQNQNQ-NQPISHDHNSNHSLPSSASLSVGFGIFPLLTATPCMPQQQSQNNEVQENP 83
Q++N N N N S+ +N+N++ P S S+S P ++ S NN++ N
Sbjct: 49 QSENTNTNNINNSSSNINNNNNNTPDSMSMSTSLSSSPSVSFNHL--DLNSINNKINNNT 106
Query: 84 SNNNN 88
+ NNN
Sbjct: 107 TTNNN 111
>OPAP_DROME (P23488) DROMSOPA protein
Length = 69
Score = 35.8 bits (81), Expect = 0.090
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Query: 14 PSPSSLQHHHQQNQNQNQNQNQPISHDHNSNHSL 47
P+P QHH QQ Q+Q Q Q H H+ +H L
Sbjct: 28 PAPEQQQHHQQQQQHQQQQQQH---HQHHQHHQL 58
>ENC_DROME (Q8MSX1) Encore protein
Length = 1818
Score = 35.4 bits (80), Expect = 0.12
Identities = 22/59 (37%), Positives = 32/59 (53%), Gaps = 6/59 (10%)
Query: 29 QNQNQNQPISHDHNSNHSLPSSA-SLSVGFGIFPLL-----TATPCMPQQQSQNNEVQE 81
Q Q Q Q H+HN+N+++ SS+ + S G G PL+ T PQQQ Q + Q+
Sbjct: 172 QQQQQLQGEQHEHNNNNNINSSSKAQSAGRGNSPLMETPAVIVTSQQPQQQQQQQQQQQ 230
>ABRU_DROME (Q24174) Abrupt protein (Clueless protein)
Length = 904
Score = 35.4 bits (80), Expect = 0.12
Identities = 20/75 (26%), Positives = 37/75 (48%), Gaps = 3/75 (4%)
Query: 17 SSLQHHHQQNQNQNQNQNQPISH-DHNSNHSLPSSASLSVGFGIFPLLTATPC--MPQQQ 73
++L H+ N N N + N +S+ ++N+N++ SS + + P T+ C
Sbjct: 201 AALSHNSSNNNNNNSSSNNSLSNNNNNNNNNAESSNHNKISSYLSPNQTSAACNNSSNSN 260
Query: 74 SQNNEVQENPSNNNN 88
S N+ N S++NN
Sbjct: 261 SNNHSSSHNNSSSNN 275
>PUM_DROME (P25822) Maternal pumilio protein
Length = 1533
Score = 35.0 bits (79), Expect = 0.15
Identities = 23/68 (33%), Positives = 30/68 (43%), Gaps = 4/68 (5%)
Query: 20 QHHHQQNQNQNQNQNQPISHDHNSNHSLPSSASLSVGFGIFPLLTATPCMPQQQSQNNEV 79
QH HQQ+ Q Q Q Q + H +H + L G G L P QQQ Q +
Sbjct: 217 QHPHQQHPQQQQQQQQAQNQGH-PHHLMGGGNGLGNGNG---LGIQHPGQQQQQQQQQQQ 272
Query: 80 QENPSNNN 87
Q++P N
Sbjct: 273 QQHPGQYN 280
>HMCA_DROME (P09085) Homeotic caudal protein
Length = 472
Score = 35.0 bits (79), Expect = 0.15
Identities = 16/46 (34%), Positives = 25/46 (53%), Gaps = 8/46 (17%)
Query: 13 APSPSSLQHHH--------QQNQNQNQNQNQPISHDHNSNHSLPSS 50
AP+ +S HHH N N N N N P +H++N+N++ S+
Sbjct: 166 APTSASSPHHHLAHHLSAVANNNNNNNNNNSPSTHNNNNNNNSVSN 211
>HMAN_DROSU (Q24645) Homeotic antennapedia protein
Length = 394
Score = 34.7 bits (78), Expect = 0.20
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 7/105 (6%)
Query: 22 HHQQNQNQNQNQNQPISHDHNSNHSLPSSASLSVGFGIFPLLTATPCMPQQQSQNNEVQE 81
H QQ Q Q Q Q QP+ + S A++ VG G+ P + P + Q + Q
Sbjct: 155 HPQQQQQQQQQQQQPVVY-----ASCKLQAAVGVGLGMVPEGGSPPLVDQMTGHHMNAQM 209
Query: 82 NPSNNNNFWNLRMCPEVVNLPKKGVITEEENHGKIAMMESEENGV 126
+ ++ ++ V +P V +NH + M ++ GV
Sbjct: 210 SLPHHMGHPQAQLGYTDVGVP--DVTEVHQNHHNMGMYGQQQTGV 252
>DRPL_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrophy
protein)
Length = 1183
Score = 34.7 bits (78), Expect = 0.20
Identities = 25/87 (28%), Positives = 34/87 (38%), Gaps = 19/87 (21%)
Query: 16 PSSLQHHHQQNQNQNQNQNQPISHDH------------------NSNHSLPSSASLSVGF 57
P + HHH Q Q Q Q Q QP H H NS+H+ P + S S+G
Sbjct: 472 PPAPAHHHHQQQQQPQPQPQPQQHHHGNSGPPPPGAYPHPLESSNSHHAHPYNMSPSLG- 530
Query: 58 GIFPLLTATPCMPQQQSQNNEVQENPS 84
+ P +P Q + Q P+
Sbjct: 531 SLRPYPPGPAHLPPSHGQVSYSQAGPN 557
>SIMA_DROME (Q24167) Similar protein
Length = 1507
Score = 34.3 bits (77), Expect = 0.26
Identities = 16/27 (59%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 20 QHHHQQNQNQNQNQNQPISHDHNSNHS 46
QHH+QQ Q Q Q Q+ P HD NSN S
Sbjct: 763 QHHNQQQQQQQQQQHHPQHHD-NSNSS 788
>SPEN_DROME (Q8SX83) Split ends protein
Length = 5560
Score = 33.9 bits (76), Expect = 0.34
Identities = 23/77 (29%), Positives = 31/77 (39%), Gaps = 20/77 (25%)
Query: 14 PSPSSL----QHHHQQNQNQNQNQNQPISHDHNSNHSLPSSASLSVGFGIFPLLTATPCM 69
PSPSS HHQ QN +Q Q+Q + +SN L A+P
Sbjct: 1383 PSPSSRYWRSSSHHQNQQNNHQQQSQQLHGSSSSN----------------TCLMASPAR 1426
Query: 70 PQQQSQNNEVQENPSNN 86
P+ S N+ + P N
Sbjct: 1427 PRSLSSNSSDSDVPGQN 1443
>LB27_ARATH (Q9STS6) Putative LOB domain protein 27
Length = 328
Score = 33.9 bits (76), Expect = 0.34
Identities = 18/43 (41%), Positives = 22/43 (50%), Gaps = 3/43 (6%)
Query: 20 QHHHQQNQNQNQNQNQPI---SHDHNSNHSLPSSASLSVGFGI 59
Q + QNQNQN N NQ I DHN +S L +G G+
Sbjct: 142 QPQNGQNQNQNHNHNQMIHELGSDHNKQQEDVTSQQLDLGMGL 184
>DRPL_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian
atrophy protein)
Length = 1185
Score = 33.9 bits (76), Expect = 0.34
Identities = 16/38 (42%), Positives = 17/38 (44%)
Query: 13 APSPSSLQHHHQQNQNQNQNQNQPISHDHNSNHSLPSS 50
A P S HHH Q Q Q Q Q Q H NS P +
Sbjct: 472 AHPPVSTHHHHHQQQQQQQQQQQQQQHHGNSGPPPPGA 509
>P3K3_DICDI (P54675) Phosphatidylinositol 3-kinase 3 (EC 2.7.1.137)
(PI3-kinase) (PtdIns-3-kinase) (PI3K) (Fragment)
Length = 1585
Score = 33.5 bits (75), Expect = 0.45
Identities = 19/90 (21%), Positives = 42/90 (46%), Gaps = 20/90 (22%)
Query: 8 DLVLIAPSPSSLQHHHQQNQNQNQNQNQPISHDHNSNHSLPSSASLSVGFGIFPLLTATP 67
++ L P+ +L +++ N N N N N ++++N+N++
Sbjct: 45 NIYLTIPTTQNLINNNNNNNNNNNNNNNNNNNNNNNNNN-------------------NV 85
Query: 68 CMPQQQSQNNEVQENPSNNNNFWNLRMCPE 97
+P ++N E +N ++NNN N+ + P+
Sbjct: 86 IIPSASTENKEENDNNNSNNNN-NINLSPD 114
>KCA1_RABIT (Q9BG98) Calcium-activated potassium channel alpha
subunit 1 (Calcium-activated potassium channel,
subfamily M, alpha subunit 1) (Maxi K channel) (MaxiK)
(BK channel) (K(VCA)alpha) (BKCA alpha) (KCa1.1)
(Slowpoke homolog) (Slo homolog) (Slo-al
Length = 1179
Score = 33.5 bits (75), Expect = 0.45
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 185 GGGDGEGCSGVKRQKGLLGS--SQNAAATSHSSNSNGTTPKSFATSSCHQ 232
GGG G G SG++ + S S +A+++S SS+S+ ++ S ++SS H+
Sbjct: 15 GGGGGGGGSGLRMSSNIHASHLSLDASSSSSSSSSSSSSSSSSSSSSVHE 64
>HMDF_DROME (P07548) Homeotic deformed protein
Length = 590
Score = 33.5 bits (75), Expect = 0.45
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Query: 20 QHHHQQNQNQNQNQNQPISHDHNSNHSLPSSASLSVGFGIFPLLTATPCMPQQQSQNNEV 79
Q Q Q Q Q P+ ++ + SL S +S G P + P P+ S
Sbjct: 465 QQQQSQQQQTQQTQQTPVMNECIRSDSLESIGDVSSSLGNPPYI---PAAPETTSSYPGS 521
Query: 80 QENPSNNNN 88
Q++ SNNNN
Sbjct: 522 QQHLSNNNN 530
>GBF_DICDI (P36417) G-box binding factor (GBF)
Length = 708
Score = 33.5 bits (75), Expect = 0.45
Identities = 22/70 (31%), Positives = 28/70 (39%), Gaps = 12/70 (17%)
Query: 20 QHH-HQQNQNQNQNQNQPISHDHNSNHSLPSSASLSVGFGIFPLLTATPCMPQQQSQNNE 78
QHH H Q Q Q+Q+ NQ H HN + + P PQ S +
Sbjct: 222 QHHQHSQPQQQHQH-NQQQQHQHNQQQHQQQQNQIQM----------VPQQPQSLSNSGN 270
Query: 79 VQENPSNNNN 88
N +NNNN
Sbjct: 271 NNNNNNNNNN 280
Score = 32.3 bits (72), Expect = 1.00
Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 26/66 (39%)
Query: 20 QHHHQQNQNQNQNQNQPISHDHNSNHSLPSSASLSVGFGIFPLLTATPCMPQQQSQNNEV 79
QHH QQ Q Q Q+ Q H H+ PQQQ Q+N+
Sbjct: 205 QHHQQQQQQQQQHHQQQQHHQHS--------------------------QPQQQHQHNQQ 238
Query: 80 QENPSN 85
Q++ N
Sbjct: 239 QQHQHN 244
Score = 29.3 bits (64), Expect = 8.4
Identities = 34/147 (23%), Positives = 45/147 (30%), Gaps = 31/147 (21%)
Query: 20 QHHHQQNQNQNQNQNQPISHDHNSNHSLPSSASLSVGFGIFPLLTATPCMPQQQSQNNEV 79
Q HQ NQ Q+Q Q I SL +S + + NN
Sbjct: 238 QQQHQHNQQQHQQQQNQIQMVPQQPQSLSNSGN-----------------NNNNNNNNNN 280
Query: 80 QENPSNNNNFWNLRMCPEVV---------NLPKKGVITEEENHGKIAMMESEENGVYGSE 130
N +NNNN N + N P + ++H SE+ G
Sbjct: 281 SNNNNNNNNNNNSHQLNNLTLSQNNTSGSNTPSPSTKGKRKHH---ETSNSEKKDSSGQT 337
Query: 131 YRVCQDCGNRAKKDCVFRR--CRTCCK 155
C C A RR C+ C K
Sbjct: 338 IPKCTRCNEAASWKHDKRRWWCKECKK 364
>CCF_DROME (P41046) Centrosomal and chromosomal factor (CCF)
(Chromocentrosomin)
Length = 550
Score = 33.5 bits (75), Expect = 0.45
Identities = 27/97 (27%), Positives = 33/97 (33%), Gaps = 24/97 (24%)
Query: 15 SPSSLQHHHQQNQN---------------QNQNQNQPISHDH---------NSNHSLPSS 50
S + QHHHQQ Q Q Q Q Q H H NS HS ++
Sbjct: 37 SQTQQQHHHQQQQQHMYHAAVAAHQQQLLQQQQQQQHHRHHHQPANTSSSSNSRHSHAAA 96
Query: 51 ASLSVGFGIFPLLTATPCMPQQQSQNNEVQENPSNNN 87
V + QQQ Q + Q SN+N
Sbjct: 97 TQTQVAAAVANSRQQQQQQQQQQQQQQQQQTASSNSN 133
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.313 0.128 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,848,368
Number of Sequences: 164201
Number of extensions: 1316015
Number of successful extensions: 5637
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 4950
Number of HSP's gapped (non-prelim): 419
length of query: 235
length of database: 59,974,054
effective HSP length: 107
effective length of query: 128
effective length of database: 42,404,547
effective search space: 5427782016
effective search space used: 5427782016
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Medicago: description of AC146853.5