BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146852.15 + phase: 0
(838 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
LPRC_HUMAN (P42704) 130 kDa leucine-rich protein (LRP 130) (GP13... 49 6e-05
YLE1_SCHPO (Q10451) Hypothetical protein C1093.01 in chromosome I 44 0.002
MML8_MYCTU (O07800) Putative membrane protein mmpL8 39 0.044
Y625_METJA (Q58042) Hypothetical ATP-binding protein MJ0625 36 0.37
BCSC_XANAC (P58938) Cellulose synthase operon protein C precursor 33 3.1
VG37_BPT4 (P03744) Long tail fiber protein p37 (Protein Gp37) (R... 33 4.1
FRDD_PROVU (P20924) Fumarate reductase subunit D (Fumarate reduc... 33 4.1
SYR_STRAW (Q82E68) Arginyl-tRNA synthetase (EC 6.1.1.19) (Argini... 32 7.0
PIX1_RAT (Q99NA7) Pituitary homeobox 1 32 7.0
AROB_VIBCH (Q9KNV2) 3-dehydroquinate synthase (EC 4.2.3.4) 32 7.0
PIX1_MOUSE (P70314) Pituitary homeobox 1 (Homeobox protein P-OTX... 32 9.1
PIX1_HUMAN (P78337) Pituitary homeobox 1 (Hindlimb expressed hom... 32 9.1
>LPRC_HUMAN (P42704) 130 kDa leucine-rich protein (LRP 130) (GP130)
(Leucine-rich PPR-motif containing protein)
Length = 1273
Score = 48.9 bits (115), Expect = 6e-05
Identities = 53/247 (21%), Positives = 107/247 (42%), Gaps = 13/247 (5%)
Query: 405 SLIAGLVRDGELELALRIFGEMPESNLV----SWNTMIGAMVQASMFEEAIDLLREMQNQ 460
SL+ L + E A RI+ + + V +N ++ +Q D L +M+
Sbjct: 11 SLLPELKLEERTEFAHRIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEA 70
Query: 461 GIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNA 520
I+ +RVT + ++ +G ++ A I +++ D+ + + +ALV +R GD NA
Sbjct: 71 NIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENA 130
Query: 521 MRVFENMEKRDV----SAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTA 576
+ M + + A + A +G+ + +++ K ++ D + ++ +
Sbjct: 131 ENILTVMRDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKVEKFELHLMDRDLLQIIFS 190
Query: 577 FSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPND- 635
FS GY+ Q FW +K I ++ LL L + A ++ + P+ D
Sbjct: 191 FSKAGYLSMS-QKFW--KKFTCERRYIPDAMNLILLLVTEKLEDVALQILLACPVSKEDG 247
Query: 636 -VIWGSF 641
++GSF
Sbjct: 248 PSVFGSF 254
Score = 44.7 bits (104), Expect = 0.001
Identities = 37/151 (24%), Positives = 70/151 (45%), Gaps = 8/151 (5%)
Query: 373 NAIIDMYM----KCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPE 428
NA++ +Y+ K + K+ ++ VT+ LIA G++E A +I G M
Sbjct: 45 NALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKT 104
Query: 429 SNLVSWNTMIGAMV----QASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDL 484
+L + A+V +A E A ++L M++ GI+ T + + +A G +D
Sbjct: 105 KDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEKGDIDH 164
Query: 485 AKWIYTYIEKNDIHIDMQLGTALVDMFSRCG 515
K +EK ++H+ + ++ FS+ G
Sbjct: 165 VKQTLEKVEKFELHLMDRDLLQIIFSFSKAG 195
Score = 38.1 bits (87), Expect = 0.097
Identities = 43/177 (24%), Positives = 73/177 (40%), Gaps = 6/177 (3%)
Query: 259 MTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQ-HGLAGE 317
M E ++ N + L+ Y GD+ +I K+L + + S V H AG+
Sbjct: 67 MEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGD 126
Query: 318 VLV---VLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNA 374
+ +L M G P T L+ + A A+ GD+ K + V + L +D
Sbjct: 127 MENAENILTVMRDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKVEKFELHLMDRDLLQ 186
Query: 375 IIDMYMKCGKREAACKVFDSMS--NKTVVTWNSLIAGLVRDGELELALRIFGEMPES 429
II + K G + K + + + + +LI LV + ++AL+I P S
Sbjct: 187 IIFSFSKAGYLSMSQKFWKKFTCERRYIPDAMNLILLLVTEKLEDVALQILLACPVS 243
Score = 36.2 bits (82), Expect = 0.37
Identities = 31/165 (18%), Positives = 68/165 (40%), Gaps = 16/165 (9%)
Query: 257 NLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAG 316
+L+ EL ++ T + + D K G +Y V YN ++ Y+Q+
Sbjct: 11 SLLPELKLEERTEFAHRIWDTLQKLGAVYDVSH------------YNALLKVYLQNEYKF 58
Query: 317 EVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAII 376
L +M + +P++VT IA+ +GD+ ++ L + + +A++
Sbjct: 59 SPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALV 118
Query: 377 DMYMKCGKREAACKVFDSMSNKTVV----TWNSLIAGLVRDGELE 417
+ + G E A + M + + T+ +L+ G+++
Sbjct: 119 TGHARAGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEKGDID 163
Score = 35.0 bits (79), Expect = 0.82
Identities = 24/107 (22%), Positives = 45/107 (41%), Gaps = 4/107 (3%)
Query: 223 EMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCG 282
+M E ++PN VT I++ + D+E K+ M + V +AL+ + + G
Sbjct: 66 KMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAG 125
Query: 283 DMYAVREIFDEFSDKNLV----MYNTIMSNYVQHGLAGEVLVVLDEM 325
DM I D + Y +++ Y + G V L+++
Sbjct: 126 DMENAENILTVMRDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKV 172
>YLE1_SCHPO (Q10451) Hypothetical protein C1093.01 in chromosome I
Length = 1261
Score = 43.9 bits (102), Expect = 0.002
Identities = 65/324 (20%), Positives = 127/324 (39%), Gaps = 41/324 (12%)
Query: 293 EFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSV 352
+F NL N M Y+ A +++ ++G D T L+
Sbjct: 868 QFKSSNLFCDNMKMLGYIPR--ASTFAHLINNSTRRGDTDDATTALNIFEETK------- 918
Query: 353 GKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSNK----TVVTWNSLIA 408
R+ ++ + NA++ + + K+F M T VT+ ++I
Sbjct: 919 ---------RHNVKPSVFLYNAVLSKLGRARRTTECWKLFQEMKESGLLPTSVTYGTVIN 969
Query: 409 GLVRDGELELALRIFGEMP-----ESNLVSWNTMIGAMVQASMF--EEAIDLLREMQNQG 461
R G+ LA ++F EM + + +NTMI VQ +MF E+A+ +
Sbjct: 970 AACRIGDESLAEKLFAEMENQPNYQPRVAPYNTMIQFEVQ-TMFNREKALFYYNRLCATD 1028
Query: 462 IKGDRVTMVGIASACGYLGALDL--AKWIYTYIEKNDIHIDMQ--------LGTALVDMF 511
I+ T + A G L +++ K + +E+ D+ I LG + D+
Sbjct: 1029 IEPSSHTYKLLMDAYGTLKPVNVGSVKAVLELMERTDVPILSMHYAAYIHILGNVVSDVQ 1088
Query: 512 SRCGDPLNAMRVFENME-KRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVF 570
+ +NA+ + E + D + + + I I++ +M + +V + ++
Sbjct: 1089 AATSCYMNALAKHDAGEIQLDANLFQSQIESLIANDRIVEGIQIVSDMKRYNVSLNAYIV 1148
Query: 571 VALLTAFSHGGYVDQGRQLFWAME 594
AL+ F+ G + + R F +E
Sbjct: 1149 NALIKGFTKVGMISKARYYFDLLE 1172
Score = 35.0 bits (79), Expect = 0.82
Identities = 25/87 (28%), Positives = 44/87 (49%), Gaps = 4/87 (4%)
Query: 547 NAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHY 606
+A A+ +F+E + +VK F++ A+L+ + +LF M K G+ P V Y
Sbjct: 906 DATTALNIFEETKRHNVKPSVFLYNAVLSKLGRARRTTECWKLFQEM-KESGLLPTSVTY 964
Query: 607 GCMVDLLGRAG---LLEEAFDLMKSMP 630
G +++ R G L E+ F M++ P
Sbjct: 965 GTVINAACRIGDESLAEKLFAEMENQP 991
Score = 32.3 bits (72), Expect = 5.3
Identities = 20/56 (35%), Positives = 28/56 (49%), Gaps = 4/56 (7%)
Query: 595 KIHGVSPQIVHYGCMVDLLGRAGLLEEAFDL---MKSMPIKPNDVIWGSFL-AACR 646
K H V P + Y ++ LGRA E + L MK + P V +G+ + AACR
Sbjct: 918 KRHNVKPSVFLYNAVLSKLGRARRTTECWKLFQEMKESGLLPTSVTYGTVINAACR 973
>MML8_MYCTU (O07800) Putative membrane protein mmpL8
Length = 1089
Score = 39.3 bits (90), Expect = 0.044
Identities = 68/256 (26%), Positives = 99/256 (38%), Gaps = 36/256 (14%)
Query: 533 SAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTAF----SHGGYVDQGRQ 588
SA T AI + G ++ ML V F V LL A G++ R
Sbjct: 323 SAATVAITFLGMVFTQLGILKTVGPMLGISVAVVFFAAVTLLPALMVLTGRRGWIAPRRD 382
Query: 589 L---FWAMEKIHGVSPQIVHYGC----MVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSF 641
L FW +H V H +V L G AGL +D K++P I
Sbjct: 383 LTRRFWRSSGVHIVRRPKTHLLASALVLVILAGCAGLARYNYDDRKTLPASVESSIG--- 439
Query: 642 LAACRKH--KNVEFANY---------------AD-EKITQLAPEKVGIHVLLSNIYASAG 683
AA KH N+ Y AD E++ Q + G+ ++ I AG
Sbjct: 440 YAALDKHFPSNLIIPEYLFIQSSTDLRTPKALADLEQMVQRVSQVPGV-AMVRGITRPAG 498
Query: 684 KWNDVARVRLQMKEKGFQKVAGSSSIEVH-GLIREFTSGDESHTENAQIGLMLQEINCRI 742
+ + AR Q E G + GS I VH G I + G ++ +++G + ++N I
Sbjct: 499 RSLEQARTSWQAGEVGSKLDEGSKQIAVHTGDIDKLAGG--ANLMASKLGDVRAQVNRAI 556
Query: 743 SQVGYVPDTTNVLVDV 758
S VG + D L D+
Sbjct: 557 STVGGLIDALAYLQDL 572
>Y625_METJA (Q58042) Hypothetical ATP-binding protein MJ0625
Length = 336
Score = 36.2 bits (82), Expect = 0.37
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 13/99 (13%)
Query: 685 WNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQIGLMLQE-----IN 739
W +R +KE+GF + + ++ L E EN ++GL ++E IN
Sbjct: 200 WLRKGTIRNILKEEGFSEEEINYCLDYLSLPYEIVD----LIENKKLGLSVEETIRQWIN 255
Query: 740 CRISQVGYVPDTTNVLVDVDEQEKEHLLSRHSEKLAMAY 778
++ Y+ DTT D+DE+E +LS+ +K+ ++Y
Sbjct: 256 IEKDKIKYLIDTT----DLDEEELYKVLSKFKDKIKISY 290
>BCSC_XANAC (P58938) Cellulose synthase operon protein C precursor
Length = 1508
Score = 33.1 bits (74), Expect = 3.1
Identities = 29/134 (21%), Positives = 56/134 (41%), Gaps = 12/134 (8%)
Query: 507 LVDMFSRCGDPLNAMRVFENME--KRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQ--- 561
LV ++SR G A +F+ + +R S A +R A+ ++ D + Q
Sbjct: 429 LVGLYSRQGRLQEASALFDRLPAAERAKSGGQALLRSNVQRARARQFLDAGDAVSAQTEL 488
Query: 562 -----DVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRA 616
+ D ++ + L + G DQ R + + +HG P+ +H + L +
Sbjct: 489 EAAMVERPGDAWIRLDLARLYQQAGRPDQARSVMDGLLAVHGDQPEALHANAL--LAQES 546
Query: 617 GLLEEAFDLMKSMP 630
G + A+D + +P
Sbjct: 547 GDWQGAYDSLDRIP 560
>VG37_BPT4 (P03744) Long tail fiber protein p37 (Protein Gp37)
(Receptor recognizing protein)
Length = 1026
Score = 32.7 bits (73), Expect = 4.1
Identities = 46/181 (25%), Positives = 73/181 (39%), Gaps = 42/181 (23%)
Query: 394 SMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDL 453
+MSN V S I G V+ G ALRI WN GA+ + S E +
Sbjct: 560 TMSNGLFVQGGSSITGQVKIGGTANALRI-----------WNAEYGAIFRRS--ESNFYI 606
Query: 454 LREMQNQGIKGD-----RVTMVGIASACGYLG----ALDLAKWIYTYIEKNDIHID--MQ 502
+ QN+G GD R +G+ LG +D + T + I+ + MQ
Sbjct: 607 IPTNQNEGESGDIHSSLRPVRIGLNDGMVGLGRDSFIVDQNNALTTINSNSRINANFRMQ 666
Query: 503 LG-TALVDMFSRCGDPLNAMRV---------------FENMEKRDVSAWTAAIRVKAVEG 546
LG +A +D + C D + + N+++ D SA+ ++ + V+G
Sbjct: 667 LGQSAYID--AECTDAVRPAGAGSFASQNNEDVRAPFYMNIDRTDASAYVPILKQRYVQG 724
Query: 547 N 547
N
Sbjct: 725 N 725
>FRDD_PROVU (P20924) Fumarate reductase subunit D (Fumarate
reductase 13 kDa hydrophobic protein)
Length = 119
Score = 32.7 bits (73), Expect = 4.1
Identities = 18/43 (41%), Positives = 25/43 (57%), Gaps = 7/43 (16%)
Query: 109 SGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEG 151
S + AI I L ++I MGI P+ FT+ +IMAFS+G
Sbjct: 26 SAIVSPAIIILLGILIPMGIAPEAFTY-------DRIMAFSQG 61
>SYR_STRAW (Q82E68) Arginyl-tRNA synthetase (EC 6.1.1.19)
(Arginine--tRNA ligase) (ArgRS)
Length = 590
Score = 32.0 bits (71), Expect = 7.0
Identities = 23/78 (29%), Positives = 39/78 (49%), Gaps = 13/78 (16%)
Query: 168 FVANSLIHFYAACGKVDL--------GRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVC 219
FV S I+FY+ K+DL G +++ML+ L+ V + A+C
Sbjct: 243 FVDESKIYFYSVFDKLDLEIRDPDVVGESGYNDMLDET----CRLLEESGVAVRSDGALC 298
Query: 220 LFFEMVEVGVEPNPVTMV 237
+FF+ V+ G + NPV ++
Sbjct: 299 VFFDDVK-GPDGNPVPLI 315
>PIX1_RAT (Q99NA7) Pituitary homeobox 1
Length = 315
Score = 32.0 bits (71), Expect = 7.0
Identities = 31/102 (30%), Positives = 43/102 (41%), Gaps = 14/102 (13%)
Query: 5 SLPPIPMATTTTTLHQSSSPLLLPTTTQKPKNSSLQTCKTLIELKQLHCNMLKKGVFNIN 64
SL P P++T + T S SPL + P + S T + + + M G+ NIN
Sbjct: 189 SLAPAPLSTKSFTFFNSMSPLSSQSMFSAPSSISSMTMPSSMGPGSVP-GMPNSGLNNIN 247
Query: 65 KLIAACVQMGTHESLNYALNAFKEDEGTKCSLY-----TCNT 101
L T SLN A++ GT S Y TCN+
Sbjct: 248 NL--------TGSSLNSAMSPGACPYGTPASPYSVYRDTCNS 281
>AROB_VIBCH (Q9KNV2) 3-dehydroquinate synthase (EC 4.2.3.4)
Length = 361
Score = 32.0 bits (71), Expect = 7.0
Identities = 25/97 (25%), Positives = 47/97 (47%), Gaps = 3/97 (3%)
Query: 225 VEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDM 284
V +G P+++ + A L L +KV ++T V L A++ + G
Sbjct: 6 VNLGERSYPISIGAGLFANPALLSLSAKQKVV-IVTNHTVAP--LYAPAIISLLDHIGCQ 62
Query: 285 YAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVV 321
+A+ E+ D K L +NT+MS ++H + +V+V+
Sbjct: 63 HALLELPDGEQYKTLETFNTVMSFLLEHNYSRDVVVI 99
>PIX1_MOUSE (P70314) Pituitary homeobox 1 (Homeobox protein P-OTX)
(Pituitary OTX-related factor) (Hindlimb expressed
homeobox protein backfoot) (Ptx1)
Length = 315
Score = 31.6 bits (70), Expect = 9.1
Identities = 31/102 (30%), Positives = 43/102 (41%), Gaps = 14/102 (13%)
Query: 5 SLPPIPMATTTTTLHQSSSPLLLPTTTQKPKNSSLQTCKTLIELKQLHCNMLKKGVFNIN 64
SL P P++T + T S SPL + P + S T + + + M G+ NIN
Sbjct: 189 SLAPAPLSTKSFTFFNSMSPLSSQSMFSAPSSISSMTMPSSMGPGAVP-GMPNSGLNNIN 247
Query: 65 KLIAACVQMGTHESLNYALNAFKEDEGTKCSLY-----TCNT 101
L T SLN A++ GT S Y TCN+
Sbjct: 248 NL--------TGSSLNSAMSPGACPYGTPASPYSVYRDTCNS 281
>PIX1_HUMAN (P78337) Pituitary homeobox 1 (Hindlimb expressed
homeobox protein backfoot)
Length = 314
Score = 31.6 bits (70), Expect = 9.1
Identities = 31/102 (30%), Positives = 43/102 (41%), Gaps = 14/102 (13%)
Query: 5 SLPPIPMATTTTTLHQSSSPLLLPTTTQKPKNSSLQTCKTLIELKQLHCNMLKKGVFNIN 64
SL P P++T + T S SPL + P + S T + + + M G+ NIN
Sbjct: 188 SLAPAPLSTKSFTFFNSMSPLSSQSMFSAPSSISSMTMPSSMGPGAVP-GMPNSGLNNIN 246
Query: 65 KLIAACVQMGTHESLNYALNAFKEDEGTKCSLY-----TCNT 101
L T SLN A++ GT S Y TCN+
Sbjct: 247 NL--------TGSSLNSAMSPGACPYGTPASPYSVYRDTCNS 280
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.322 0.137 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,843,954
Number of Sequences: 164201
Number of extensions: 3951804
Number of successful extensions: 9846
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 9826
Number of HSP's gapped (non-prelim): 28
length of query: 838
length of database: 59,974,054
effective HSP length: 119
effective length of query: 719
effective length of database: 40,434,135
effective search space: 29072143065
effective search space used: 29072143065
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 70 (31.6 bits)
Medicago: description of AC146852.15