BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146842.1 + phase: 0
(216 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
MYBH_DICDI (P34127) Myb-like protein (Fragment) 40 0.005
MYBB_XENLA (P52551) Myb-related protein B (B-Myb) (Myb-related p... 39 0.012
ADA2_HUMAN (O75478) Transcriptional adapter 2-like (ADA2-like pr... 38 0.020
ARRJ_ARATH (Q9M9B9) Putative two-component response regulator ARR19 37 0.035
YD3A_SCHPO (Q10274) Hypothetical protein C13G7.10 in chromosome I 35 0.10
MYBB_CHICK (Q03237) Myb-related protein B (B-Myb) 35 0.10
SNT1_YEAST (P25357) Potential DNA-binding protein SNT1 35 0.13
MYB_MOUSE (P06876) Myb proto-oncogene protein (C-myb) 35 0.13
MYB_HUMAN (P10242) Myb proto-oncogene protein (C-myb) 35 0.13
MYB_CHICK (P01103) Myb proto-oncogene protein (C-myb) 35 0.13
MYB_BOVIN (P46200) Myb proto-oncogene protein (C-myb) 35 0.13
TRF2_HUMAN (Q15554) Telomeric repeat binding factor 2 (TTAGGG re... 35 0.17
MYBA_MOUSE (P51960) Myb-related protein A (A-Myb) 35 0.17
MYBA_HUMAN (P10243) Myb-related protein A (A-Myb) 35 0.17
MYBA_CHICK (P52550) Myb-related protein A (A-Myb) 35 0.17
TRF2_CHICK (Q9PU53) Telomeric repeat binding factor 2 (TTAGGG re... 34 0.23
MYBA_XENLA (Q05935) Myb-related protein A (A-Myb) (XAMYB) (MYB-r... 34 0.23
NCR1_HUMAN (O75376) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR) 34 0.30
MYB_AVIMB (P01104) Transforming protein Myb 34 0.30
NCR1_MOUSE (Q60974) Nuclear receptor corepressor 1 (N-CoR1) (N-C... 33 0.39
>MYBH_DICDI (P34127) Myb-like protein (Fragment)
Length = 451
Score = 39.7 bits (91), Expect = 0.005
Identities = 19/58 (32%), Positives = 30/58 (50%), Gaps = 3/58 (5%)
Query: 94 TKNKTKKVVRVK---HWTEEEHRLFLEGIEIHGKGKWKLISQHVRTRTASQVASHAQK 148
+ N T KV + K WT EE ++ ++ + +H + WK I++H RT Q QK
Sbjct: 136 SNNNTPKVEKKKTKGKWTSEEDQILIKAVNLHNQKNWKKIAEHFPDRTDVQCHHRYQK 193
Score = 29.6 bits (65), Expect = 5.6
Identities = 12/43 (27%), Positives = 21/43 (47%)
Query: 107 WTEEEHRLFLEGIEIHGKGKWKLISQHVRTRTASQVASHAQKH 149
WT++E +E ++ +G KW I+ H++ R Q H
Sbjct: 204 WTKDEDDKVIELVKTYGPKKWSDIALHLKGRMGKQCRERWHNH 246
>MYBB_XENLA (P52551) Myb-related protein B (B-Myb) (Myb-related
protein 1) (XMYB1)
Length = 743
Score = 38.5 bits (88), Expect = 0.012
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 86 TDENKAPPTKNKTKKVVRVKHWTEEEHRLFLEGIEIHGKGKWKLISQHVRTRTASQVASH 145
TD + P +N+ V+VK WT EE ++ HG+G+WK I+ ++ RT Q H
Sbjct: 18 TDSDVPEPKENR----VKVK-WTPEEDETLKALVKKHGQGEWKTIASNLNNRTEQQ-CQH 71
Query: 146 AQKHFLH 152
LH
Sbjct: 72 RWLRVLH 78
Score = 30.4 bits (67), Expect = 3.3
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 107 WTEEEHRLFLEGIEIHGKGKWKLISQHVRTRTASQVASHAQKH 149
WT+EE +E ++ +G W LI++ +R R Q H
Sbjct: 86 WTKEEDEKVIELVKKYGTKHWTLIAKQLRGRMGKQCRERWHNH 128
Score = 28.9 bits (63), Expect = 9.5
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 96 NKTKKVVRVKHWTEEEHRLFLEGIEIHGKGKWKLISQHVRTRTASQVASH 145
N V+ WTEEE R+ + ++ G +W I++ + RT + V +H
Sbjct: 127 NHLNPEVKKSSWTEEEDRIICQAHKVLG-NRWAEIAKLLPGRTDNAVKNH 175
>ADA2_HUMAN (O75478) Transcriptional adapter 2-like (ADA2-like
protein) (KL04P)
Length = 443
Score = 37.7 bits (86), Expect = 0.020
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 10/105 (9%)
Query: 107 WTEEEHRLFLEGIEIHGKGKWKLISQHVRTRTASQVASHAQKHFLHQLDGTSKKTYKKRS 166
WT +E LE + G G W+ ++ + T+T + H KHF++ S K++
Sbjct: 75 WTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKHFINNPLFASTLLNLKQA 134
Query: 167 NFYITSLKGNSKPLLNKDNIPSPSTSWDGNFHPLLYKD--NYVPA 209
T+ + P + D+ P P+ F LL +D Y+PA
Sbjct: 135 EEAKTA--DTAIPFHSTDDPPRPT------FDSLLSRDMAGYMPA 171
>ARRJ_ARATH (Q9M9B9) Putative two-component response regulator ARR19
Length = 407
Score = 37.0 bits (84), Expect = 0.035
Identities = 29/95 (30%), Positives = 46/95 (47%), Gaps = 10/95 (10%)
Query: 107 WTEEEHRLFLEGIEIHG---KGKWKLI-----SQHVRTRTASQVASHAQKHFLHQLDGTS 158
WTEE H+ FLE IEI G K K++ + T S VASH QKH ++ + +
Sbjct: 220 WTEELHQKFLEAIEIIGGIEKANPKVLVECLQEMRIEGITRSNVASHLQKHRINLEE--N 277
Query: 159 KKTYKKRSNFYITSLKGNSKPLLNKDNIPSPSTSW 193
+ + + N + T+ + L DN+ + S+
Sbjct: 278 QIPQQTQGNGWATAYGTLAPSLQGSDNVNTTIPSY 312
>YD3A_SCHPO (Q10274) Hypothetical protein C13G7.10 in chromosome I
Length = 390
Score = 35.4 bits (80), Expect = 0.10
Identities = 23/70 (32%), Positives = 31/70 (43%), Gaps = 4/70 (5%)
Query: 93 PTKNKTKKVVRVKHWTEEEHRLFLEGIEIHGKGKWKLISQHVRTRTASQVASHAQKHFLH 152
PTK + +V WTE+E L G +IHG G WK I R ++ + + F
Sbjct: 48 PTKVRKPRV----KWTEKETNDLLRGCQIHGVGNWKKILLDERFHFTNRSPNDLKDRFRT 103
Query: 153 QLDGTSKKTY 162
L KK Y
Sbjct: 104 ILPEDYKKFY 113
>MYBB_CHICK (Q03237) Myb-related protein B (B-Myb)
Length = 686
Score = 35.4 bits (80), Expect = 0.10
Identities = 18/70 (25%), Positives = 34/70 (47%)
Query: 107 WTEEEHRLFLEGIEIHGKGKWKLISQHVRTRTASQVASHAQKHFLHQLDGTSKKTYKKRS 166
WT+EE + +E ++ +G +W LI++H++ R Q H ++ +S + R
Sbjct: 86 WTKEEDQKVIELVKKYGTKQWTLIAKHLKGRLGKQCRERWHNHLNPEVKKSSWTEEEDRI 145
Query: 167 NFYITSLKGN 176
F + GN
Sbjct: 146 IFEAHKVLGN 155
Score = 30.8 bits (68), Expect = 2.5
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 96 NKTKKVVRVKHWTEEEHRLFLEGIEIHGKGKWKLISQHVRTRTASQVASHAQKHFLHQLD 155
N V+ WTEEE R+ E ++ G +W I++ + RT + V +H ++D
Sbjct: 127 NHLNPEVKKSSWTEEEDRIIFEAHKVLG-NRWAEIAKLLPGRTDNAVKNHWNSTIKRKVD 185
>SNT1_YEAST (P25357) Potential DNA-binding protein SNT1
Length = 1226
Score = 35.0 bits (79), Expect = 0.13
Identities = 24/112 (21%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Query: 38 ENIGLVCGRSSTEVKEHYETLLHDLALIEEGLVDFSTNSDDFIISKASTDENKAPPTKNK 97
+ +G +SS + ++ ++ G T DF + EN K+K
Sbjct: 829 DEVGEESNKSSVIETNNGVQIMDPKGAVQNGYYPEETKELDFSL------ENALQRKKHK 882
Query: 98 TKKVVRVKHWTEEEHRLFLEGIEIHGKGKWKLISQHVRTRTASQVASHAQKH 149
+ + +W+ E +LF E ++ G +W LIS+ + T++ + V ++ Q++
Sbjct: 883 SAPEHKTSYWSVRESQLFPELLKEFGS-QWSLISEKLGTKSTTMVRNYYQRN 933
>MYB_MOUSE (P06876) Myb proto-oncogene protein (C-myb)
Length = 636
Score = 35.0 bits (79), Expect = 0.13
Identities = 14/52 (26%), Positives = 28/52 (52%)
Query: 107 WTEEEHRLFLEGIEIHGKGKWKLISQHVRTRTASQVASHAQKHFLHQLDGTS 158
WT+EE + +E ++ +G +W +I++H++ R Q H ++ TS
Sbjct: 95 WTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTS 146
Score = 32.7 bits (73), Expect = 0.66
Identities = 21/77 (27%), Positives = 34/77 (43%), Gaps = 2/77 (2%)
Query: 72 FSTNSDDFIISKASTDENKAPPTKNKTKKVVRVKHWTEEEHRLFLEGIEIHGKGKWKLIS 131
+S++ DD I D + P K + + WT EE + +E +G WK+I+
Sbjct: 10 YSSDEDDEDIEMCDHDYDGLLPKSGK--RHLGKTRWTREEDEKLKKLVEQNGTDDWKVIA 67
Query: 132 QHVRTRTASQVASHAQK 148
++ RT Q QK
Sbjct: 68 NYLPNRTDVQCQHRWQK 84
>MYB_HUMAN (P10242) Myb proto-oncogene protein (C-myb)
Length = 640
Score = 35.0 bits (79), Expect = 0.13
Identities = 14/52 (26%), Positives = 28/52 (52%)
Query: 107 WTEEEHRLFLEGIEIHGKGKWKLISQHVRTRTASQVASHAQKHFLHQLDGTS 158
WT+EE + +E ++ +G +W +I++H++ R Q H ++ TS
Sbjct: 95 WTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTS 146
Score = 31.2 bits (69), Expect = 1.9
Identities = 20/77 (25%), Positives = 33/77 (41%), Gaps = 2/77 (2%)
Query: 72 FSTNSDDFIISKASTDENKAPPTKNKTKKVVRVKHWTEEEHRLFLEGIEIHGKGKWKLIS 131
+S++ DD D + P K + + WT EE + +E +G WK+I+
Sbjct: 10 YSSDEDDEDFEMCDHDYDGLLPKSGK--RHLGKTRWTREEDEKLKKLVEQNGTDDWKVIA 67
Query: 132 QHVRTRTASQVASHAQK 148
++ RT Q QK
Sbjct: 68 NYLPNRTDVQCQHRWQK 84
>MYB_CHICK (P01103) Myb proto-oncogene protein (C-myb)
Length = 641
Score = 35.0 bits (79), Expect = 0.13
Identities = 14/52 (26%), Positives = 28/52 (52%)
Query: 107 WTEEEHRLFLEGIEIHGKGKWKLISQHVRTRTASQVASHAQKHFLHQLDGTS 158
WT+EE + +E ++ +G +W +I++H++ R Q H ++ TS
Sbjct: 95 WTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTS 146
>MYB_BOVIN (P46200) Myb proto-oncogene protein (C-myb)
Length = 640
Score = 35.0 bits (79), Expect = 0.13
Identities = 14/52 (26%), Positives = 28/52 (52%)
Query: 107 WTEEEHRLFLEGIEIHGKGKWKLISQHVRTRTASQVASHAQKHFLHQLDGTS 158
WT+EE + +E ++ +G +W +I++H++ R Q H ++ TS
Sbjct: 95 WTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTS 146
Score = 32.7 bits (73), Expect = 0.66
Identities = 21/77 (27%), Positives = 34/77 (43%), Gaps = 2/77 (2%)
Query: 72 FSTNSDDFIISKASTDENKAPPTKNKTKKVVRVKHWTEEEHRLFLEGIEIHGKGKWKLIS 131
+S++ DD I D + P K + + WT EE + +E +G WK+I+
Sbjct: 10 YSSDEDDEDIEMCDHDYDGLLPKSGK--RHLGKTRWTREEDEKLKKLVEQNGTDDWKVIA 67
Query: 132 QHVRTRTASQVASHAQK 148
++ RT Q QK
Sbjct: 68 NYLPNRTDVQCQHRWQK 84
>TRF2_HUMAN (Q15554) Telomeric repeat binding factor 2 (TTAGGG
repeat binding factor 2) (Telomeric DNA binding protein)
Length = 500
Score = 34.7 bits (78), Expect = 0.17
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 90 KAPPTKNKTKKVVRVKHWTEEEHRLFLEGIEIHGKGKWKLISQH 133
+A P ++ T + + + WT EE G++ +G+G W IS++
Sbjct: 433 QAAPDEDSTTNITKKQKWTVEESEWVKAGVQKYGEGNWAAISKN 476
>MYBA_MOUSE (P51960) Myb-related protein A (A-Myb)
Length = 751
Score = 34.7 bits (78), Expect = 0.17
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 107 WTEEEHRLFLEGIEIHGKGKWKLISQHVRTRTASQVASHAQKH 149
WT+EE + +E ++ +G +W LI++H++ R Q H
Sbjct: 90 WTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNH 132
Score = 34.3 bits (77), Expect = 0.23
Identities = 18/62 (29%), Positives = 28/62 (45%)
Query: 87 DENKAPPTKNKTKKVVRVKHWTEEEHRLFLEGIEIHGKGKWKLISQHVRTRTASQVASHA 146
D + P + KK+ WT +E + +E HG W LI+ H++ R+ Q
Sbjct: 18 DHDYEVPQQKGLKKLWNRVKWTRDEDDKLKKLVEQHGTDDWTLIASHLQNRSDFQCQHRW 77
Query: 147 QK 148
QK
Sbjct: 78 QK 79
>MYBA_HUMAN (P10243) Myb-related protein A (A-Myb)
Length = 752
Score = 34.7 bits (78), Expect = 0.17
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 107 WTEEEHRLFLEGIEIHGKGKWKLISQHVRTRTASQVASHAQKH 149
WT+EE + +E ++ +G +W LI++H++ R Q H
Sbjct: 90 WTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNH 132
Score = 34.3 bits (77), Expect = 0.23
Identities = 18/62 (29%), Positives = 28/62 (45%)
Query: 87 DENKAPPTKNKTKKVVRVKHWTEEEHRLFLEGIEIHGKGKWKLISQHVRTRTASQVASHA 146
D + P + KK+ WT +E + +E HG W LI+ H++ R+ Q
Sbjct: 18 DHDYEVPQQKGLKKLWNRVKWTRDEDDKLKKLVEQHGTDDWTLIASHLQNRSDFQCQHRW 77
Query: 147 QK 148
QK
Sbjct: 78 QK 79
>MYBA_CHICK (P52550) Myb-related protein A (A-Myb)
Length = 757
Score = 34.7 bits (78), Expect = 0.17
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 107 WTEEEHRLFLEGIEIHGKGKWKLISQHVRTRTASQVASHAQKH 149
WT+EE + +E ++ +G +W LI++H++ R Q H
Sbjct: 90 WTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNH 132
Score = 30.8 bits (68), Expect = 2.5
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Query: 73 STNSDDFIISKASTDENKAPPTKNKTKKVVRVKHWTEEEHRLFLEGIEIHGKGKWKLISQ 132
S DDF + D + + KK+ WT +E + +E +G W I+
Sbjct: 8 SEEDDDFQYA----DHDYEISQQRSLKKICNRVKWTRDEDEKLKKLVEQNGTDDWAFIAS 63
Query: 133 HVRTRTASQVASHAQK 148
H++ R+ Q QK
Sbjct: 64 HLQNRSDFQCQHRWQK 79
>TRF2_CHICK (Q9PU53) Telomeric repeat binding factor 2 (TTAGGG
repeat binding factor 2) (Telomeric DNA binding protein)
Length = 718
Score = 34.3 bits (77), Expect = 0.23
Identities = 20/74 (27%), Positives = 37/74 (49%), Gaps = 6/74 (8%)
Query: 71 DFSTNSDDFIISKASTDENKAPPTKNKTKKVVRVKHWTEEEHRLFLEGIEIHGKGKWKLI 130
D ++ D+ A T+ + T +KK + WT +E +G+ +G+G+WK I
Sbjct: 636 DSWSDEDELFTDAALTETSSNNSTVYGSKK----QKWTVQESEWIKDGVRKYGEGRWKTI 691
Query: 131 SQH--VRTRTASQV 142
S+ + RT+ Q+
Sbjct: 692 SEKYPFQNRTSVQI 705
>MYBA_XENLA (Q05935) Myb-related protein A (A-Myb) (XAMYB)
(MYB-related protein 2) (XMYB2)
Length = 728
Score = 34.3 bits (77), Expect = 0.23
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 107 WTEEEHRLFLEGIEIHGKGKWKLISQHVRTRTASQVASHAQKH 149
WT+EE + +E + +G KW +I++H++ R Q H
Sbjct: 89 WTKEEDQRVIELVHKYGPKKWSIIAKHLKGRIGKQCRERWHNH 131
>NCR1_HUMAN (O75376) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR)
Length = 2440
Score = 33.9 bits (76), Expect = 0.30
Identities = 23/83 (27%), Positives = 42/83 (49%), Gaps = 10/83 (12%)
Query: 92 PPTKNKTKKVVRVKHWTEEEHRLFLEGIEIHGKGKWKLISQHVRTRTASQVA----SHAQ 147
PP + + + V WTEEE + +G+ HG+ W I++ V T++ +Q ++ +
Sbjct: 613 PPPEPISTEPVETSRWTEEEMEVAKKGLVEHGR-NWAAIAKMVGTKSEAQCKNFYFNYKR 671
Query: 148 KHFLHQL-----DGTSKKTYKKR 165
+H L L TS+K ++R
Sbjct: 672 RHNLDNLLQQHKQKTSRKPREER 694
>MYB_AVIMB (P01104) Transforming protein Myb
Length = 382
Score = 33.9 bits (76), Expect = 0.30
Identities = 14/52 (26%), Positives = 27/52 (51%)
Query: 107 WTEEEHRLFLEGIEIHGKGKWKLISQHVRTRTASQVASHAQKHFLHQLDGTS 158
WT+EE + +E ++ +G +W I++H++ R Q H ++ TS
Sbjct: 24 WTKEEDQRVIEHVQKYGPKRWSDIAKHLKGRIGKQCRERWHNHLNPEVKKTS 75
>NCR1_MOUSE (Q60974) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR)
(Retinoid X receptor interacting protein 13) (RIP13)
Length = 2453
Score = 33.5 bits (75), Expect = 0.39
Identities = 21/76 (27%), Positives = 38/76 (49%), Gaps = 2/76 (2%)
Query: 92 PPTKNKTKKVVRVKHWTEEEHRLFLEGIEIHGKGKWKLISQHVRTRTASQVAS-HAQKHF 150
PP + + + V WTEEE + +G+ HG+ W I++ V T++ +Q + +
Sbjct: 612 PPPEPISTEPVETSRWTEEEMEVAKKGLVEHGR-NWAAIAKMVGTKSEAQCKNFYFNYKR 670
Query: 151 LHQLDGTSKKTYKKRS 166
H LD ++ +K S
Sbjct: 671 RHNLDNLLQQHKQKAS 686
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.312 0.131 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,466,477
Number of Sequences: 164201
Number of extensions: 1196054
Number of successful extensions: 2669
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 2612
Number of HSP's gapped (non-prelim): 83
length of query: 216
length of database: 59,974,054
effective HSP length: 106
effective length of query: 110
effective length of database: 42,568,748
effective search space: 4682562280
effective search space used: 4682562280
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Medicago: description of AC146842.1