BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146819.11 - phase: 0
(316 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GBLP_DICDI (P46800) Guanine nucleotide-binding protein beta subu... 55 2e-07
WDS_DROME (Q9V3J8) Will die slowly protein 52 1e-06
COPA_HUMAN (P53621) Coatomer alpha subunit (Alpha-coat protein) ... 52 1e-06
HUS7_MOUSE (Q8VEJ4) WD-repeat protein HUSSY-07 52 2e-06
HUS7_HUMAN (Q9NVX2) WD-repeat protein HUSSY-07 51 3e-06
COPA_BOVIN (Q27954) Coatomer alpha subunit (Alpha-coat protein) ... 51 4e-06
SSGP_VOLCA (P21997) Sulfated surface glycoprotein 185 precursor ... 50 6e-06
YPRO_OWEFU (P21260) Hypothetical proline-rich protein (Fragment) 50 1e-05
PRP8_YEAST (P33334) Pre-mRNA splicing factor PRP8 50 1e-05
WASL_RAT (O08816) Neural Wiskott-Aldrich syndrome protein (N-WASP) 49 2e-05
FBW7_MOUSE (Q8VBV4) F-box/WD-repeat protein 7 (F-box and WD-40 d... 49 2e-05
FBW7_HUMAN (Q969H0) F-box/WD-repeat protein 7 (F-box and WD-40 d... 49 2e-05
CWFH_SCHPO (O94620) Cell cycle control protein cwf17 49 2e-05
CST1_HUMAN (Q05048) Cleavage stimulation factor, 50 kDa subunit ... 49 2e-05
Y163_SYNY3 (Q55563) Hypothetical WD-repeat protein sll0163 48 4e-05
LECT_SOLTU (Q9S8M0) Chitin-binding lectin 1 precursor (PL-I) 48 4e-05
PRL2_ARATH (Q39190) PP1/PP2A phosphatases pleiotropic regulator ... 47 5e-05
FMN_CHICK (Q05858) Formin (Limb deformity protein) 47 6e-05
EBN2_EBV (P12978) EBNA-2 nuclear protein 47 6e-05
ACRO_HUMAN (P10323) Acrosin precursor (EC 3.4.21.10) 47 6e-05
>GBLP_DICDI (P46800) Guanine nucleotide-binding protein beta
subunit-like protein
Length = 329
Score = 55.1 bits (131), Expect = 2e-07
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 18/140 (12%)
Query: 140 LKGHTKVVSALAVDHTGSRVLSGSYDYMVRMYDF-QGMNSRLQSFRQIEPSEGHQIRNLS 198
LKGH+ V + + H G LSGS+D +R++D +G+++RL +GH +S
Sbjct: 66 LKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRL--------FKGHTQDVMS 117
Query: 199 WSPTADRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHITGLTCGEWHPKTK 258
+ ++D ++GS A I + TLGE L+ + H ++C + P T
Sbjct: 118 VAFSSDNRQIISGSRDATI--KVWNTLGECK------FTLEGPEAHQDWVSCIRFSPNT- 168
Query: 259 ETILTSSEDGSLRIWDVNDF 278
TI++ S D ++IWD+ F
Sbjct: 169 PTIVSGSWDNKVKIWDIKSF 188
Score = 31.2 bits (69), Expect = 3.5
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 139 VLKGHTKVVSALAVDHTGSRVLSGSYDYMVRMYDFQGMNSRLQSFRQIEPSEGHQ--IRN 196
+ KGHT+ V ++A +++SGS D +++++ G + +E E HQ +
Sbjct: 107 LFKGHTQDVMSVAFSSDNRQIISGSRDATIKVWNTLG-----ECKFTLEGPEAHQDWVSC 161
Query: 197 LSWSPTADRFLCVTGSAQAKIYD 219
+ +SP + + + KI+D
Sbjct: 162 IRFSPNTPTIVSGSWDNKVKIWD 184
>WDS_DROME (Q9V3J8) Will die slowly protein
Length = 361
Score = 52.4 bits (124), Expect = 1e-06
Identities = 55/200 (27%), Positives = 86/200 (42%), Gaps = 29/200 (14%)
Query: 79 PLVGPPPPPPHHEADDDDGEMIGPPPPPPGSNFNDSEDEDNDSDQDELGNRFRIPLSNEI 138
P V PP P A + PG+ + + N S N + +
Sbjct: 12 PGVVHPPQQPLPTAPSGPNSLQPNSVGQPGATTSSNSSASNKSSLSVKPN-----YTLKF 66
Query: 139 VLKGHTKVVSALAVDHTGSRVLSGSYDYMVRMYD-FQGMNSRLQSFRQIEPSEGHQ--IR 195
L GHTK VSA+ G + S S D +++++ + G + S GH+ I
Sbjct: 67 TLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--------GHKLGIS 118
Query: 196 NLSWSPTADRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHITGLTCGEWHP 255
+++WS +D L V+GS D L + E G + LK KGH + C ++P
Sbjct: 119 DVAWS--SDSRLLVSGS------DDKTLKVWELSTG----KSLKTLKGHSNYVFCCNFNP 166
Query: 256 KTKETILTSSEDGSLRIWDV 275
++ I++ S D S+RIWDV
Sbjct: 167 QS-NLIVSGSFDESVRIWDV 185
Score = 37.4 bits (85), Expect = 0.049
Identities = 35/145 (24%), Positives = 61/145 (41%), Gaps = 32/145 (22%)
Query: 140 LKGHTKVVSALAVDHTGSRVLSGSYDYMVRMYDFQGMNSRLQSFRQIEPSEGHQIRNLSW 199
L H+ VSA+ + GS ++S SYD + R++D + Q + + + + + +
Sbjct: 194 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD----TASGQCLKTLIDDDNPPVSFVKF 249
Query: 200 SPTADRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHIT---------GLTC 250
SP L T K++D + KG + LK GH +T
Sbjct: 250 SPNGKYILAATLDNTLKLWD--------YSKG----KCLKTYTGHKNEKYCIFANFSVTG 297
Query: 251 GEWHPKTKETILTSSEDGSLRIWDV 275
G+W I++ SED + IW++
Sbjct: 298 GKW-------IVSGSEDNMVYIWNL 315
>COPA_HUMAN (P53621) Coatomer alpha subunit (Alpha-coat protein)
(Alpha-COP) (HEPCOP) (HEP-COP) [Contains: Xenin
(Xenopsin-related peptide); Proxenin]
Length = 1224
Score = 52.4 bits (124), Expect = 1e-06
Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 36/165 (21%)
Query: 139 VLKGHTKVVSALAVDHTGSRVLSGSYDYMVRMYDFQGMNSRLQSFRQIEPS--------- 189
VL GH V T V+S S D VR++D G+ + S +E
Sbjct: 130 VLTGHNHYVMCAQFHPTEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDL 189
Query: 190 ------------EGHQIRNLSWS---PTADRFLCVTGSAQAKIYDRDGLTLGEFVKGDMY 234
EGH R ++W+ PT + Q KI+ + E
Sbjct: 190 FGTTDAVVKHVLEGHD-RGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWE------- 241
Query: 235 IRDLKNTKGHITGLTCGEWHPKTKETILTSSEDGSLRIWDVNDFT 279
+ +GH ++C +HP+ +E IL++SED S+R+WD++ T
Sbjct: 242 ---VDTCRGHYNNVSCAVFHPR-QELILSNSEDKSIRVWDMSKRT 282
Score = 38.1 bits (87), Expect = 0.029
Identities = 37/175 (21%), Positives = 72/175 (41%), Gaps = 29/175 (16%)
Query: 140 LKGHTKVVSALAVDHTGSRVLSGSYDYMVRMYDFQGMNSRLQSFRQIEPSEGHQIRNLSW 199
L GH + H +LS S D +R++++Q ++ + H + +
Sbjct: 89 LLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQS-----RTCVCVLTGHNHYVMCAQF 143
Query: 200 SPTADRFLCVTGSAQAKIYDRDGLTLGEFVKG--DMYIR-----DLKNT---------KG 243
PT D + + +++D GL G + +R DL T +G
Sbjct: 144 HPTEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEG 203
Query: 244 HITGLTCGEWHPKTKETILTSSEDGSLRIWDVNDFTTQKQVWKIFTLLFFHGHFH 298
H G+ +HP T I++ ++D ++IW +N + + W++ T GH++
Sbjct: 204 HDRGVNWAAFHP-TMPLIVSGADDRQVKIWRMN----ESKAWEVDTC---RGHYN 250
>HUS7_MOUSE (Q8VEJ4) WD-repeat protein HUSSY-07
Length = 485
Score = 52.0 bits (123), Expect = 2e-06
Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 16/137 (11%)
Query: 140 LKGHTKVVSALAVDHTGSRVLSGSYDYMVRMYDFQGMNSRLQSFRQIEPSEGHQIRNLSW 199
L+GH++ V ++A TG + SGS D VR +D H + ++SW
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC-----KGHRHWVLSISW 164
Query: 200 SPTADRFLCVTGSAQAKIYD-RDGLTLGEFVKGDMYIRDLKNTKGHITGLTCGEWHPKTK 258
SP + + Q ++D GL +G R L ITGL+ H +
Sbjct: 165 SPDGKKLASGCKNGQILLWDPSTGLQVG---------RTLTGHSKWITGLSWEPLHMNPE 215
Query: 259 -ETILTSSEDGSLRIWD 274
+ +SS+DGS+R+WD
Sbjct: 216 CRYVASSSKDGSVRVWD 232
>HUS7_HUMAN (Q9NVX2) WD-repeat protein HUSSY-07
Length = 485
Score = 51.2 bits (121), Expect = 3e-06
Identities = 38/136 (27%), Positives = 58/136 (41%), Gaps = 14/136 (10%)
Query: 140 LKGHTKVVSALAVDHTGSRVLSGSYDYMVRMYDFQGMNSRLQSFRQIEPSEGHQIRNLSW 199
L+GH++ V ++A TG + SGS D VR +D H + ++SW
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC-----KGHRHWVLSISW 164
Query: 200 SPTADRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHITGLTCGEWHPKTK- 258
SP + + Q ++D G R L ITGL+ H +
Sbjct: 165 SPDGKKLASGCKNGQILLWDPS--------TGKQVGRTLAGHSKWITGLSWEPLHANPEC 216
Query: 259 ETILTSSEDGSLRIWD 274
+ +SS+DGS+RIWD
Sbjct: 217 RYVASSSKDGSVRIWD 232
>COPA_BOVIN (Q27954) Coatomer alpha subunit (Alpha-coat protein)
(Alpha-COP) (HEPCOP) (HEP-COP) [Contains: Xenin
(Xenopsin-related peptide); Proxenin]
Length = 1224
Score = 50.8 bits (120), Expect = 4e-06
Identities = 42/165 (25%), Positives = 68/165 (40%), Gaps = 36/165 (21%)
Query: 139 VLKGHTKVVSALAVDHTGSRVLSGSYDYMVRMYDFQGMNSRLQSFRQIEPS--------- 189
VL GH V + V+S S D VR++D G+ + S +E
Sbjct: 130 VLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDL 189
Query: 190 ------------EGHQIRNLSWS---PTADRFLCVTGSAQAKIYDRDGLTLGEFVKGDMY 234
EGH R ++W+ PT + Q KI+ + E
Sbjct: 190 FGTTDAVVKHVLEGHD-RGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWE------- 241
Query: 235 IRDLKNTKGHITGLTCGEWHPKTKETILTSSEDGSLRIWDVNDFT 279
+ +GH ++C +HP+ +E IL++SED S+R+WD++ T
Sbjct: 242 ---VDTCRGHYNNVSCAVFHPR-QELILSNSEDKSIRVWDMSKRT 282
Score = 36.6 bits (83), Expect = 0.084
Identities = 36/175 (20%), Positives = 72/175 (40%), Gaps = 29/175 (16%)
Query: 140 LKGHTKVVSALAVDHTGSRVLSGSYDYMVRMYDFQGMNSRLQSFRQIEPSEGHQIRNLSW 199
L GH + H +LS S D +R++++Q ++ + H + +
Sbjct: 89 LLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQS-----RTCVCVLTGHNHYVMCAQF 143
Query: 200 SPTADRFLCVTGSAQAKIYDRDGLTLGEFVKG--DMYIR-----DLKNT---------KG 243
P+ D + + +++D GL G + +R DL T +G
Sbjct: 144 HPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEG 203
Query: 244 HITGLTCGEWHPKTKETILTSSEDGSLRIWDVNDFTTQKQVWKIFTLLFFHGHFH 298
H G+ +HP T I++ ++D ++IW +N + + W++ T GH++
Sbjct: 204 HDRGVNWAAFHP-TMPLIVSGADDRQVKIWRMN----ESKAWEVDTC---RGHYN 250
>SSGP_VOLCA (P21997) Sulfated surface glycoprotein 185 precursor
(SSG 185)
Length = 485
Score = 50.4 bits (119), Expect = 6e-06
Identities = 28/68 (41%), Positives = 30/68 (43%), Gaps = 8/68 (11%)
Query: 40 VPTSNPKTTSDDFPSKECLHSIRPPKNPNPPSPPLQDDSPLVGPPPPPPHHEADDDDGEM 99
+P S T S PS PP +P PPSPP SP PPPPPP
Sbjct: 229 LPPSPQPTASSRPPS--------PPPSPRPPSPPPPSPSPPPPPPPPPPPPPPPPPSPPP 280
Query: 100 IGPPPPPP 107
PPPPPP
Sbjct: 281 PPPPPPPP 288
Score = 47.8 bits (112), Expect = 4e-05
Identities = 29/85 (34%), Positives = 33/85 (38%), Gaps = 13/85 (15%)
Query: 25 SQTPLETIHKATRRSVPTSNPKTTSDDFPSKECLHSIRPPKNPNPPSPPLQDDSPLVGPP 84
+ +PL + T S P S P + P PP P PP PP P PP
Sbjct: 225 NNSPLPPSPQPTASSRPPSPPPSPRPPSPPPPSPSPPPPPPPPPPPPPPPPPSPPPPPPP 284
Query: 85 PPPPHHEADDDDGEMIGPPPPPPGS 109
PPPP PPPPPP S
Sbjct: 285 PPPP-------------PPPPPPPS 296
Score = 44.3 bits (103), Expect = 4e-04
Identities = 21/47 (44%), Positives = 22/47 (46%)
Query: 63 PPKNPNPPSPPLQDDSPLVGPPPPPPHHEADDDDGEMIGPPPPPPGS 109
PP P PPSPP P PPPPPP + PP PPP S
Sbjct: 269 PPPPPPPPSPPPPPPPPPPPPPPPPPPSPSPPRKPPSPSPPVPPPPS 315
Score = 34.7 bits (78), Expect = 0.32
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Query: 63 PPKNPNPPSPPLQDDSPLVGPPPPPPHHEADDDDGEMIGPPPPPP 107
P +P PPSP S PP PPP PPPPPP
Sbjct: 224 PNNSPLPPSPQPTASS---RPPSPPPSPRPPSPPPPSPSPPPPPP 265
Score = 32.0 bits (71), Expect = 2.1
Identities = 14/26 (53%), Positives = 16/26 (60%), Gaps = 1/26 (3%)
Query: 63 PPKNPNPPSPPLQDDSPLVGPPPPPP 88
PP +P+PP P SP V PPP PP
Sbjct: 293 PPPSPSPPRKP-PSPSPPVPPPPSPP 317
>YPRO_OWEFU (P21260) Hypothetical proline-rich protein (Fragment)
Length = 141
Score = 49.7 bits (117), Expect = 1e-05
Identities = 23/50 (46%), Positives = 24/50 (48%)
Query: 58 LHSIRPPKNPNPPSPPLQDDSPLVGPPPPPPHHEADDDDGEMIGPPPPPP 107
LHS+ PP P PP PP P PPPPPP PPPPPP
Sbjct: 4 LHSLTPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP 53
Score = 38.9 bits (89), Expect = 0.017
Identities = 20/45 (44%), Positives = 20/45 (44%), Gaps = 16/45 (35%)
Query: 63 PPKNPNPPSPPLQDDSPLVGPPPPPPHHEADDDDGEMIGPPPPPP 107
PP P PP PP P PPPPPP PPPPPP
Sbjct: 29 PPPPPPPPPPPPPPPPP---PPPPPP-------------PPPPPP 57
Score = 38.1 bits (87), Expect = 0.029
Identities = 20/45 (44%), Positives = 20/45 (44%), Gaps = 18/45 (40%)
Query: 63 PPKNPNPPSPPLQDDSPLVGPPPPPPHHEADDDDGEMIGPPPPPP 107
PP P PP PP P PPPPPP PPPPPP
Sbjct: 32 PPPPPPPPPPP-----PPPPPPPPPP-------------PPPPPP 58
>PRP8_YEAST (P33334) Pre-mRNA splicing factor PRP8
Length = 2413
Score = 49.7 bits (117), Expect = 1e-05
Identities = 25/60 (41%), Positives = 33/60 (54%), Gaps = 11/60 (18%)
Query: 69 PPSPPLQDDSPLV--GPPPPPPHHEADDDDGEMIG---------PPPPPPGSNFNDSEDE 117
PP P ++DS L PPPPPP +E ++ D M+ PPPPPP SNF + +E
Sbjct: 6 PPPPGFEEDSDLALPPPPPPPPGYEIEELDNPMVPSSVNEDTFLPPPPPPPSNFEINAEE 65
Score = 38.1 bits (87), Expect = 0.029
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 14/60 (23%)
Query: 63 PPKNPNPPSPPLQD-DSPLVG-----------PPPPPPHHE--ADDDDGEMIGPPPPPPG 108
PP P PP +++ D+P+V PPPPP + E A++ + PPPPPPG
Sbjct: 20 PPPPPPPPGYEIEELDNPMVPSSVNEDTFLPPPPPPPSNFEINAEEIVDFTLPPPPPPPG 79
Score = 36.6 bits (83), Expect = 0.084
Identities = 16/35 (45%), Positives = 21/35 (59%), Gaps = 1/35 (2%)
Query: 82 GPPPPPPHHEADDDDGEMIGPPPPPPGSNFNDSED 116
G PPPPP E +D D + PPPPPPG + ++
Sbjct: 3 GLPPPPPGFE-EDSDLALPPPPPPPPGYEIEELDN 36
>WASL_RAT (O08816) Neural Wiskott-Aldrich syndrome protein (N-WASP)
Length = 501
Score = 48.5 bits (114), Expect = 2e-05
Identities = 28/71 (39%), Positives = 30/71 (41%), Gaps = 3/71 (4%)
Query: 41 PTSNPKTTSDDFPSKECLHSIRPPKNPN---PPSPPLQDDSPLVGPPPPPPHHEADDDDG 97
P S T + P + PP PN PP PP S GPPPPPP A
Sbjct: 310 PPSRAPTAAPPPPPPSRPGVVVPPPPPNRMYPPPPPALPSSAPSGPPPPPPLSMAGSTAP 369
Query: 98 EMIGPPPPPPG 108
PPPPPPG
Sbjct: 370 PPPPPPPPPPG 380
Score = 44.7 bits (104), Expect = 3e-04
Identities = 27/83 (32%), Positives = 34/83 (40%), Gaps = 13/83 (15%)
Query: 29 LETIHKATRRSVPTSNPKTTSDDFPSKECLHSIRPPKNPN-----PPSPPLQDDSPLVGP 83
+E + RR P P + P HS PP P PP PP + +P P
Sbjct: 262 VEAVKNELRRQAPPPPPPSRGGPPPPPPPPHSSGPPPPPARGRGAPPPPPSR--APTAAP 319
Query: 84 PPPPPHHEADDDDGEMIGPPPPP 106
PPPPP ++ PPPPP
Sbjct: 320 PPPPPSRPG------VVVPPPPP 336
Score = 33.5 bits (75), Expect = 0.71
Identities = 20/62 (32%), Positives = 22/62 (35%), Gaps = 8/62 (12%)
Query: 46 KTTSDDFPSKECLHSIRPPKNPNPPSPPLQDDSPLVGPPPPPPHHEADDDDGEMIGPPPP 105
KT + E PP P+ PP P PPPPP G PPP
Sbjct: 258 KTGGVEAVKNELRRQAPPPPPPSRGGPPPPPPPPHSSGPPPPPARGR--------GAPPP 309
Query: 106 PP 107
PP
Sbjct: 310 PP 311
Score = 30.8 bits (68), Expect = 4.6
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 9/49 (18%)
Query: 39 SVPTSNPKTTSDDFPSKECLHSIRPPKNPNPPSPPLQDDSPLVGPPPPP 87
++P+S P P S PP P PP PP GPPPPP
Sbjct: 346 ALPSSAPSGPPPP-PPLSMAGSTAPPPPPPPPPPP--------GPPPPP 385
>FBW7_MOUSE (Q8VBV4) F-box/WD-repeat protein 7 (F-box and WD-40
domain protein 7) (F-box protein FBW7) (F-box protein
Fbxw6) (F-box-WD40 repeat protein 6) (SEL-10)
Length = 629
Score = 48.5 bits (114), Expect = 2e-05
Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 51/172 (29%)
Query: 139 VLKGHTKVVSALAVDHTGSRVLSGSYDYMVRMYD---------FQGMNSRLQSFR----- 184
VL GH V + V + G RV+SG+YD+MV+++D QG +R+ S +
Sbjct: 418 VLMGH--VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH 475
Query: 185 -------------------QIEPSEGHQIRNLSWSPTADRFLCVTGSAQA--KIYDRDGL 223
I GHQ +L+ + V+G+A + KI+D
Sbjct: 476 VVSGSLDTSIRVWDVETGNCIHTLTGHQ--SLTSGMELKDNILVSGNADSTVKIWD---- 529
Query: 224 TLGEFVKGDMYIRDLKNTKGHITGLTCGEWHPKTKETILTSSEDGSLRIWDV 275
+K ++ L+ H + +TC +++ K ++TSS+DG++++WD+
Sbjct: 530 -----IKTGQCLQTLQGPSKHQSAVTCLQFN---KNFVITSSDDGTVKLWDL 573
>FBW7_HUMAN (Q969H0) F-box/WD-repeat protein 7 (F-box and WD-40
domain protein 7) (F-box protein FBX30) (hCdc4)
(Archipelago homolog) (hAgo) (SEL-10)
Length = 707
Score = 48.5 bits (114), Expect = 2e-05
Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 51/172 (29%)
Query: 139 VLKGHTKVVSALAVDHTGSRVLSGSYDYMVRMYD---------FQGMNSRLQSFR----- 184
VL GH V + V + G RV+SG+YD+MV+++D QG +R+ S +
Sbjct: 496 VLMGH--VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH 553
Query: 185 -------------------QIEPSEGHQIRNLSWSPTADRFLCVTGSAQA--KIYDRDGL 223
I GHQ +L+ + V+G+A + KI+D
Sbjct: 554 VVSGSLDTSIRVWDVETGNCIHTLTGHQ--SLTSGMELKDNILVSGNADSTVKIWD---- 607
Query: 224 TLGEFVKGDMYIRDLKNTKGHITGLTCGEWHPKTKETILTSSEDGSLRIWDV 275
+K ++ L+ H + +TC +++ K ++TSS+DG++++WD+
Sbjct: 608 -----IKTGQCLQTLQGPNKHQSAVTCLQFN---KNFVITSSDDGTVKLWDL 651
>CWFH_SCHPO (O94620) Cell cycle control protein cwf17
Length = 340
Score = 48.5 bits (114), Expect = 2e-05
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 139 VLKGHTKVVSALAVDHTGSRVLSGSYDYMVRMYD---FQGMNSRLQSFRQIEPSEGHQIR 195
VLKGH ++++LA+ GS +LS S D VR++D F +LQ F + H +
Sbjct: 214 VLKGHKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGAIHGQEHNLL 273
Query: 196 NLSWSPTADRFLCVTGSAQAKIYDRDGLTLGEFVKGDM-YIRDLKNTKGHITGLTCGEWH 254
++WS + RF+ GS+ +Y GD+ Y+ GH + ++H
Sbjct: 274 GVAWSRNS-RFV-GAGSSDKNVYVWS-------ATGDLRYV-----LPGHEGSVNHVDFH 319
Query: 255 PKTKETILTSSEDGSLRIWDVN 276
P ++ IL+ S D ++ + ++N
Sbjct: 320 PH-QDIILSCSSDRTIFLGELN 340
Score = 30.8 bits (68), Expect = 4.6
Identities = 28/133 (21%), Positives = 55/133 (41%), Gaps = 16/133 (12%)
Query: 142 GHTKVVSALAVDHTGSRVLSGSYDYMVRMYDFQGMNSRLQSFRQIEPSEGHQIRNLSWSP 201
GHT V D +GS SG D + +++ G ++++ + +G I +L WS
Sbjct: 48 GHTAEVLVARFDPSGSYFASGGMDRQILLWNVFG---DVKNYGVLNGCKG-AITDLQWSR 103
Query: 202 TADRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHITGLTCGEWHPKTKETI 261
+ C + +D V G + ++ KGH + + E +
Sbjct: 104 DSRVVYCSSSDTHLMSWDA--------VSG----QKIRKHKGHAGVVNALDVLKVGSELL 151
Query: 262 LTSSEDGSLRIWD 274
+ S+D ++++WD
Sbjct: 152 TSVSDDCTMKVWD 164
>CST1_HUMAN (Q05048) Cleavage stimulation factor, 50 kDa subunit
(CSTF 50 kDa subunit) (CF-1 50 kDa subunit)
Length = 431
Score = 48.5 bits (114), Expect = 2e-05
Identities = 35/135 (25%), Positives = 65/135 (47%), Gaps = 13/135 (9%)
Query: 140 LKGHTKVVSALAVDHTGSRVLSGSYDYMVRMYDFQGMNSRLQSFRQIEPSEGHQIRNLSW 199
L H V+ LA T + SGS DY ++++D+ +++ ++F+ I+ E +R++S+
Sbjct: 169 LYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAK-RAFKYIQ--EAEMLRSISF 225
Query: 200 SPTADRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHITGLTCGEWHPKTKE 259
P+ D L T ++YD + T FV N + T C + +
Sbjct: 226 HPSGDFILVGTQHPTLRLYDIN--TFQCFVS--------CNPQDQHTDAICSVNYNSSAN 275
Query: 260 TILTSSEDGSLRIWD 274
+T S+DG +++WD
Sbjct: 276 MYVTGSKDGCIKLWD 290
>Y163_SYNY3 (Q55563) Hypothetical WD-repeat protein sll0163
Length = 1693
Score = 47.8 bits (112), Expect = 4e-05
Identities = 33/140 (23%), Positives = 59/140 (41%), Gaps = 24/140 (17%)
Query: 138 IVLKGHTKVVSALAVDHTGSRVLSGSYDYMVRMYDFQGMNSRLQSFRQIEPSEGHQ--IR 195
+ L GH +V G+ + + S D+ R++D G + + GHQ +
Sbjct: 1541 LTLAGHQSIVYQARFSPEGNLIATVSADHTARLWDRSG--------KTVAVLYGHQGLVG 1592
Query: 196 NLSWSPTADRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHITGLTCGEWHP 255
+ WSP + + A+++D G R+L +GH + E+ P
Sbjct: 1593 TVDWSPDGQMLVTASNDGTARLWDLSG-------------RELLTLEGHGNWVRSAEFSP 1639
Query: 256 KTKETILTSSEDGSLRIWDV 275
+ +LTSS DG+ ++W V
Sbjct: 1640 DGR-WVLTSSADGTAKLWPV 1658
Score = 42.4 bits (98), Expect = 0.002
Identities = 36/155 (23%), Positives = 59/155 (37%), Gaps = 24/155 (15%)
Query: 121 SDQDELGNRFRIPLSNEIVLKGHTKVVSALAVDHTGSRVLSGSYDYMVRMYDFQGMNSRL 180
S QD + + +GH V + G +L+ S D R++D +G
Sbjct: 1114 SGQDNTARIWNFAGEQLTLCQGHADWVRNAEFNCHGQILLTASRDGTARLWDLEG----- 1168
Query: 181 QSFRQIEPSEGHQ--IRNLSWSPTADRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDL 238
R+I +GH +RN +SP + + A+++D
Sbjct: 1169 ---REIGLCQGHTSWVRNAQFSPDGQWIVTCSADGTARLWDLSSQCFAVL---------- 1215
Query: 239 KNTKGHITGLTCGEWHPKTKETILTSSEDGSLRIW 273
KGH + W P + I+TSS DG+ R+W
Sbjct: 1216 ---KGHQNWVNNALWSPDGQH-IITSSSDGTARVW 1246
Score = 42.0 bits (97), Expect = 0.002
Identities = 33/140 (23%), Positives = 58/140 (40%), Gaps = 24/140 (17%)
Query: 139 VLKGHTKVVSALAVDHTGSRVLSGSYDYMVRMYDFQGMNSRLQSFRQIEPSEGHQ--IRN 196
+ +GH V +L+ S D R++DF G R + GHQ +
Sbjct: 1501 ICRGHEGPVYFAQFSADSRYILTASVDNTARIWDFLG--------RPLLTLAGHQSIVYQ 1552
Query: 197 LSWSPTADRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHITGLTCGEWHPK 256
+SP + V+ A+++DR G T+ GH + +W P
Sbjct: 1553 ARFSPEGNLIATVSADHTARLWDRSGKTVAVLY-------------GHQGLVGTVDWSPD 1599
Query: 257 TKETILTSSEDGSLRIWDVN 276
+ ++T+S DG+ R+WD++
Sbjct: 1600 G-QMLVTASNDGTARLWDLS 1618
Score = 38.5 bits (88), Expect = 0.022
Identities = 30/137 (21%), Positives = 57/137 (40%), Gaps = 20/137 (14%)
Query: 139 VLKGHTKVVSALAVDHTGSRVLSGSYDYMVRMYDFQGMNSRLQSFRQIEPSEGHQIRNLS 198
+L+GH K V G V + S D R +D ++ + H +RN
Sbjct: 1296 ILRGHQKEVYDADFSADGRFVFTVSADQTARQWDISQKDTITLT------GHSHWVRNAH 1349
Query: 199 WSPTADRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHITGLTCGEWHPKTK 258
++P DR L V+ A+++ +G + ++R+ G++ P
Sbjct: 1350 FNPKGDRLLTVSRDKTARLWTTEGECVAVLADHQGWVRE-------------GQFSP-DG 1395
Query: 259 ETILTSSEDGSLRIWDV 275
+ I+T S D + ++W+V
Sbjct: 1396 QWIVTGSADKTAQLWNV 1412
Score = 38.1 bits (87), Expect = 0.029
Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 26/140 (18%)
Query: 139 VLKGHTKVVSALAVDHTGSRVLSGSYDYMVRMYDFQGMNSRLQSFRQIEPSEGHQ--IRN 196
VL+GH + ++AL G + S D+ V+++ G ++ GH+ +R+
Sbjct: 1050 VLRGHQEAITALDWSADGQYFATASADHTVKLWQRHG--------EEVATLRGHEDWVRS 1101
Query: 197 LSWSPTADRFLCVTGSAQ-AKIYDRDGLTLGEFVKGDMYIRDLKNTKGHITGLTCGEWHP 255
+ +SP +FL +G A+I++ G L +GH + E++
Sbjct: 1102 VHFSPH-HQFLVTSGQDNTARIWNFAG-------------EQLTLCQGHADWVRNAEFNC 1147
Query: 256 KTKETILTSSEDGSLRIWDV 275
+ +LT+S DG+ R+WD+
Sbjct: 1148 HG-QILLTASRDGTARLWDL 1166
Score = 35.8 bits (81), Expect = 0.14
Identities = 29/139 (20%), Positives = 61/139 (43%), Gaps = 24/139 (17%)
Query: 140 LKGHTKVVSALAVDHTGSRVLSGSYDYMVRMYDFQGMNSRLQSFRQIEPSEGHQ--IRNL 197
L+GH V ++ +++ D R+++F G Q+ +GH +RN
Sbjct: 1092 LRGHEDWVRSVHFSPHHQFLVTSGQDNTARIWNFAG--------EQLTLCQGHADWVRNA 1143
Query: 198 SWSPTADRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHITGLTCGEWHPKT 257
++ L + A+++D +G R++ +GH + + ++ P
Sbjct: 1144 EFNCHGQILLTASRDGTARLWDLEG-------------REIGLCQGHTSWVRNAQFSPDG 1190
Query: 258 KETILTSSEDGSLRIWDVN 276
+ I+T S DG+ R+WD++
Sbjct: 1191 -QWIVTCSADGTARLWDLS 1208
Score = 33.1 bits (74), Expect = 0.93
Identities = 36/153 (23%), Positives = 66/153 (42%), Gaps = 24/153 (15%)
Query: 124 DELGNRFRIPLSNEIVLKGHTKVVSALAVDHTGSRVLSGSYDYMVRMYDFQGMNSRLQSF 183
D+ ++ I + I L GH+ V + G R+L+ S D R++ +G + +
Sbjct: 1322 DQTARQWDISQKDTITLTGHSHWVRNAHFNPKGDRLLTVSRDKTARLWTTEGECVAVLAD 1381
Query: 184 RQIEPSEGHQIRNLSWSPTADRFLCVTGSAQ--AKIYDRDGLTLGEFVKGDMYIRDLKNT 241
Q EG + W VTGSA A++++ G + L
Sbjct: 1382 HQGWVREGQFSPDGQW--------IVTGSADKTAQLWNVLG-------------KKLTVL 1420
Query: 242 KGHITGLTCGEWHPKTKETILTSSEDGSLRIWD 274
+GH + + P + + I+T+S+DG+ R+W+
Sbjct: 1421 RGHQDAVLNVRFSPDS-QYIVTASKDGTARVWN 1452
Score = 31.6 bits (70), Expect = 2.7
Identities = 37/159 (23%), Positives = 61/159 (38%), Gaps = 27/159 (16%)
Query: 139 VLKGHTKVVSALAVDHTGSRVLSGSYDYMVRMYD--------FQGMNSRLQSFRQIEPSE 190
VLKGH V+ G +++ S D R++ +G + + R +
Sbjct: 1214 VLKGHQNWVNNALWSPDGQHIITSSSDGTARVWSRHGKCLGTLRGHDHNIHGAR--FSLD 1271
Query: 191 GHQIRNLSWSPTA------DRFLCVTGSAQAKIYDRDGLTLGEFV----------KGDMY 234
G +I S TA L + Q ++YD D G FV + D+
Sbjct: 1272 GQKIVTYSTDNTARLWTKEGTLLTILRGHQKEVYDADFSADGRFVFTVSADQTARQWDIS 1331
Query: 235 IRDLKNTKGHITGLTCGEWHPKTKETILTSSEDGSLRIW 273
+D GH + ++PK + +LT S D + R+W
Sbjct: 1332 QKDTITLTGHSHWVRNAHFNPK-GDRLLTVSRDKTARLW 1369
>LECT_SOLTU (Q9S8M0) Chitin-binding lectin 1 precursor (PL-I)
Length = 323
Score = 47.8 bits (112), Expect = 4e-05
Identities = 28/71 (39%), Positives = 30/71 (41%), Gaps = 11/71 (15%)
Query: 47 TTSDDFPSKECLHSIR--------PPKNPNPPSPPLQDDSPLVGPPPPPPHHEADDDDGE 98
TTSD SK C + PP +P PPSPP P PPPPPP
Sbjct: 133 TTSDYCASKNCQSQCKLPSPPPPPPPPSPPPPSPP---SPPPPSPPPPPPPSPPPPSPPP 189
Query: 99 MIGPPPPPPGS 109
PPPPP S
Sbjct: 190 PSPSPPPPPAS 200
Score = 39.7 bits (91), Expect = 0.010
Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 16/45 (35%)
Query: 63 PPKNPNPPSPPLQDDSPLVGPPPPPPHHEADDDDGEMIGPPPPPP 107
PP +P PPSPP P PPPPP PPPPPP
Sbjct: 178 PPPSPPPPSPP----PPSPSPPPPP------------ASPPPPPP 206
>PRL2_ARATH (Q39190) PP1/PP2A phosphatases pleiotropic regulator
PRL2
Length = 479
Score = 47.4 bits (111), Expect = 5e-05
Identities = 61/278 (21%), Positives = 105/278 (36%), Gaps = 30/278 (10%)
Query: 6 EIYDGVRAEFPLSFGKQSKSQTPLETIHKATRRSVPTSNPKTTSDDFPSKEC---LHSIR 62
EI+ V +FP +SK I A P S P +D K ++
Sbjct: 28 EIFSPVHGQFPQP-DPESKRIRLCHKIQVAFGGVEPASKPTRIADHNSEKTAPLKALALP 86
Query: 63 PPKNPNPPSPPLQDDSPLVGPPPPPPHHEADDDDGEMIGPPPPPPGSNFNDSEDEDNDSD 122
PK + + +VGP PP + G+ P P +F++ + +
Sbjct: 87 GPKGSKELRKSATEKALVVGPTLPPRDLNNTGNPGKSTAILPAP--GSFSE-RNLSTAAL 143
Query: 123 QDELGNRF-----RIPLSNEIVLKGHTKVVSALAVDHTGSRVLSGSYDYMVRMYDFQGMN 177
+ + +R+ P N VL+GH V ++A D + +GS D ++++D
Sbjct: 144 MERMPSRWPRPEWHAPWKNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGV 203
Query: 178 SRLQSFRQIEPSEGHQIRNLSWSPTADRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRD 237
+L I Q+R L+ S Q K +D + +
Sbjct: 204 LKLTLTGHI-----GQVRGLAVSNRHTYMFSAGDDKQVKCWDLE------------QNKV 246
Query: 238 LKNTKGHITGLTCGEWHPKTKETILTSSEDGSLRIWDV 275
+++ GH+ G+ C HP T + +LT D R+WD+
Sbjct: 247 IRSYHGHLHGVYCLALHP-TLDVVLTGGRDSVCRVWDI 283
>FMN_CHICK (Q05858) Formin (Limb deformity protein)
Length = 1213
Score = 47.0 bits (110), Expect = 6e-05
Identities = 30/76 (39%), Positives = 34/76 (44%), Gaps = 23/76 (30%)
Query: 39 SVPTSNPKTTSDDFPSKECLHSIRPPKNPNPPSPPLQDDSPLVGPPPPPPHHEADDDDGE 98
S+ T S D PS E + S +P K PPSPP PPPPPP
Sbjct: 623 SISTQGENKDSYDVPSSESVLSCQP-KQMLPPSPP---------PPPPPP---------- 662
Query: 99 MIGPPPPPPGSNFNDS 114
PPPPPP F+DS
Sbjct: 663 ---PPPPPPPPPFSDS 675
Score = 39.3 bits (90), Expect = 0.013
Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 9/42 (21%)
Query: 67 PNPPSPPLQDDSPLVGPPPPPPHHEADDDDGEMIGPPPPPPG 108
P PP+PP P +GPP PPP G + PPPPPPG
Sbjct: 718 PAPPAPP---PLPGLGPPVPPPL------PGSGLPPPPPPPG 750
>EBN2_EBV (P12978) EBNA-2 nuclear protein
Length = 487
Score = 47.0 bits (110), Expect = 6e-05
Identities = 25/67 (37%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Query: 61 IRPPKNPNPPSPPLQDDSPLVGPPPPPPHHEADDDDGEMIGPPPPPPGSNFNDSEDEDND 120
+ PP P PP PP P PPPPPP + PPPPPP + E +
Sbjct: 58 VPPPLPPPPPPPPPPPPPPPPPPPPPPPPPPSPPPP-----PPPPPPPQRRDAWTQEPSP 112
Query: 121 SDQDELG 127
D+D LG
Sbjct: 113 LDRDPLG 119
>ACRO_HUMAN (P10323) Acrosin precursor (EC 3.4.21.10)
Length = 421
Score = 47.0 bits (110), Expect = 6e-05
Identities = 25/70 (35%), Positives = 28/70 (39%), Gaps = 9/70 (12%)
Query: 41 PTSNPKTTSDDFPSKECLHS---IRPPKNPNPPSPPLQDDSPLVGPPPPPPHHEADDDDG 97
PT+ P F H +PP P PP PP P PPPPPP
Sbjct: 305 PTTRPPPIRPPFSHPISAHLPWYFQPPPRPLPPRPPAAQPPPPPSPPPPPP------PPA 358
Query: 98 EMIGPPPPPP 107
+ PPPPPP
Sbjct: 359 SPLPPPPPPP 368
Score = 40.4 bits (93), Expect = 0.006
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 62 RPPKNPNPPSPPLQDDSPLVGPPPPPP 88
+PP P+PP PP SPL PPPPPP
Sbjct: 343 QPPPPPSPPPPPPPPASPLPPPPPPPP 369
Score = 31.6 bits (70), Expect = 2.7
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 22/47 (46%)
Query: 63 PPKNPNPPSPPLQDDSPLVGPPPPPPHHEADDDDGEMIGPPPPPPGS 109
PP P PP+ PL PPPPP PPPP P S
Sbjct: 350 PPPPPPPPASPL--------PPPPP--------------PPPPTPSS 374
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.315 0.136 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,342,682
Number of Sequences: 164201
Number of extensions: 2429843
Number of successful extensions: 22369
Number of sequences better than 10.0: 889
Number of HSP's better than 10.0 without gapping: 291
Number of HSP's successfully gapped in prelim test: 643
Number of HSP's that attempted gapping in prelim test: 13437
Number of HSP's gapped (non-prelim): 4342
length of query: 316
length of database: 59,974,054
effective HSP length: 110
effective length of query: 206
effective length of database: 41,911,944
effective search space: 8633860464
effective search space used: 8633860464
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 66 (30.0 bits)
Medicago: description of AC146819.11