BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146807.2 + phase: 0
(309 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YAJ8_SCHPO (Q09908) Hypothetical protein C30D11.08c in chromosome I 33 0.69
PFDB_PYRAB (Q9UYJ4) Prefoldin beta subunit (GimC beta subunit) 33 0.69
HM21_HUMAN (Q9UGU5) High-mobility group protein 2-like 1 (HMGBCG... 33 0.90
PFDB_PYRHO (O58268) Prefoldin beta subunit (GimC beta subunit) 33 1.2
PFDB_PYRFU (Q8U3S3) Prefoldin beta subunit (GimC beta subunit) 33 1.2
OFD1_HUMAN (O75665) Oral-facial-digital syndrome 1 protein (Prot... 33 1.2
TLK2_MOUSE (O55047) Serine/threonine-protein kinase tousled-like... 32 1.5
PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteaso... 32 2.0
C5P2_MACFA (Q9BE52) CDK5 regulatory subunit associated protein 2... 32 2.0
C5P2_HUMAN (Q96SN8) CDK5 regulatory subunit associated protein 2... 32 2.0
TRHY_HUMAN (Q07283) Trichohyalin 32 2.6
PRX1_CHICK (Q91018) Homeobox prospero-like protein PROX1 (PROX 1) 32 2.6
IF2_AQUAE (O67825) Translation initiation factor IF-2 31 3.4
CC37_DROVI (Q24740) Hsp90 co-chaperone Cdc37 (Hsp90 chaperone pr... 31 3.4
ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog (X-li... 31 3.4
RLP7_KLULA (P32102) Ribosome biogenesis protein RLP7 31 4.5
GRPE_CLOAB (P30726) GrpE protein (HSP-70 cofactor) 31 4.5
TPM2_YEAST (P40414) Tropomyosin 2 30 5.8
RA50_METKA (Q8TXI4) DNA double-strand break repair rad50 ATPase 30 5.8
MYSN_ACACA (P05659) Myosin II heavy chain, non muscle 30 5.8
>YAJ8_SCHPO (Q09908) Hypothetical protein C30D11.08c in chromosome I
Length = 538
Score = 33.5 bits (75), Expect = 0.69
Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 16/98 (16%)
Query: 196 SASAPSIPL---PLPPTTQGMYQEHLAMESREKQMWKA-----RYNEAENLIMTLDGKDE 247
SA P++P PLPP + +AM K+ W A R N A+ L T DG++E
Sbjct: 137 SALPPNVPASSSPLPPMS-------IAMNIARKRSWPASLAIERDNTADALFSTEDGREE 189
Query: 248 QKTHENLMLKKELVKVRRELEEKDELLMRDSKRARGRR 285
Q E + K KV R + + +R GRR
Sbjct: 190 QFNLEGVKTKSGR-KVHRPNHFDPLVKLPTRRRGPGRR 226
>PFDB_PYRAB (Q9UYJ4) Prefoldin beta subunit (GimC beta subunit)
Length = 117
Score = 33.5 bits (75), Expect = 0.69
Identities = 25/79 (31%), Positives = 38/79 (47%), Gaps = 10/79 (12%)
Query: 206 LPPTTQGM------YQEHLAMESREKQMWKARYNEAENLIMTL----DGKDEQKTHENLM 255
+PP Q M YQ+ L + ++KQ +A NEA+ + + D KT L+
Sbjct: 4 IPPQVQAMLGQLESYQQQLQLVIQQKQKVQADLNEAKKALEEIEALPDDAQVYKTVGTLI 63
Query: 256 LKKELVKVRRELEEKDELL 274
+K K +EL+EK E L
Sbjct: 64 VKTTKEKALQELKEKVETL 82
>HM21_HUMAN (Q9UGU5) High-mobility group protein 2-like 1 (HMGBCG
protein)
Length = 599
Score = 33.1 bits (74), Expect = 0.90
Identities = 28/96 (29%), Positives = 51/96 (52%), Gaps = 9/96 (9%)
Query: 188 PYPAMRYVSASAPSIPLPLPPT-TQGMYQEHLAMESREKQMWKARYNEAENL-IMTLDGK 245
P P++ Y A+AP PLPLP T G ++ E ++K+ + + +N+ + K
Sbjct: 362 PPPSIPYAGAAAP--PLPLPGLHTDGHSEKKKKKEEKDKERERGEKPKKKNMSAYQVFCK 419
Query: 246 DEQKT----HENL-MLKKELVKVRRELEEKDELLMR 276
+ + T H + L K+L +V ++L EKD+L+ +
Sbjct: 420 EYRVTIVADHPDFGELSKKLAEVWKQLPEKDKLIWK 455
>PFDB_PYRHO (O58268) Prefoldin beta subunit (GimC beta subunit)
Length = 117
Score = 32.7 bits (73), Expect = 1.2
Identities = 25/79 (31%), Positives = 38/79 (47%), Gaps = 10/79 (12%)
Query: 206 LPPTTQGM------YQEHLAMESREKQMWKARYNEAENLIMTL----DGKDEQKTHENLM 255
+PP Q M YQ+ L + ++KQ +A NEA+ + + D KT L+
Sbjct: 4 IPPQVQAMLGQLDTYQQQLQLVIQQKQKVQADLNEAKKALEEIETLPDDAQIYKTVGTLI 63
Query: 256 LKKELVKVRRELEEKDELL 274
+K K +EL+EK E L
Sbjct: 64 VKTTKEKAVQELKEKIETL 82
>PFDB_PYRFU (Q8U3S3) Prefoldin beta subunit (GimC beta subunit)
Length = 117
Score = 32.7 bits (73), Expect = 1.2
Identities = 24/79 (30%), Positives = 39/79 (48%), Gaps = 10/79 (12%)
Query: 206 LPPTTQGM------YQEHLAMESREKQMWKARYNEAENLIMTLDGKDEQ----KTHENLM 255
+PP Q M YQ+ L + ++KQ +A NEA+ + ++ + KT L+
Sbjct: 4 IPPQVQAMLGQLESYQQQLQLVIQQKQKVQADLNEAKKALEEIEKLTDDAVIYKTVGTLI 63
Query: 256 LKKELVKVRRELEEKDELL 274
+K K +EL+EK E L
Sbjct: 64 VKTTKEKALQELKEKVETL 82
>OFD1_HUMAN (O75665) Oral-facial-digital syndrome 1 protein (Protein
71-7A)
Length = 1012
Score = 32.7 bits (73), Expect = 1.2
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 18/140 (12%)
Query: 181 RAEEIGMPYPA--MRYVSASAPSIPLPL--PPTTQGMYQEHLAMESREKQMWKARYNEAE 236
R E+G PA M +V A+A ++PL P Q +E E +Q K R E
Sbjct: 836 RQLEMGGLSPAGDMSHVDAAAAAVPLSYQHPSVDQKQIEEQKEEEKIREQQVKERRQREE 895
Query: 237 ----NLIMTLDGKD---EQKTHENLMLKKEL-VKVRRELEEKDELLMRD------SKRAR 282
NL L+ + E+ E M+++ L +K+++ELE ++EL M + S +
Sbjct: 896 RRQSNLQEVLERERRELEKLYQERKMIEESLKIKIKKELEMENELEMSNQEIKDKSAHSE 955
Query: 283 GRRNFYARYCGSDSESESED 302
Y + + + ES D
Sbjct: 956 NPLEKYMKIIQQEQDQESAD 975
>TLK2_MOUSE (O55047) Serine/threonine-protein kinase tousled-like 2
(EC 2.7.1.37) (Tousled-like kinase 2)
Length = 718
Score = 32.3 bits (72), Expect = 1.5
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 17/90 (18%)
Query: 222 SREKQMWKARYNEAENLIMTLDGKDEQKTHENLM---LKKELVKVRRELEEKD---ELLM 275
+ E++ K++ N AEN +TL EQ+ L LKKE +++ ELE + L +
Sbjct: 325 TNEQKQRKSKTNGAENETLTLAEYHEQEEIFKLRLGHLKKEEAEIQAELERLERVRNLHI 384
Query: 276 RDSKRARGRRNFYARYCGSDSESESEDHPT 305
R+ KR N S+ +DHPT
Sbjct: 385 RELKRIHNEDN-----------SQFKDHPT 403
>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome
regulatory subunit)
Length = 430
Score = 32.0 bits (71), Expect = 2.0
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 223 REKQMWKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKVRRELE 268
+E+ KAR E E+ I+ L+ + ++ ENL L KE +RREL+
Sbjct: 40 KEELQEKARIAELESRILKLELEKKELERENLQLMKENEILRRELD 85
>C5P2_MACFA (Q9BE52) CDK5 regulatory subunit associated protein 2
(CDK5 activator-binding protein C48) (QflA-15432)
Length = 862
Score = 32.0 bits (71), Expect = 2.0
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 236 ENLIMTLDGKDEQKTHENLMLKKELVKVRRELEEKDELLMRDSKRARGRRNFYARYCGSD 295
E + G E N+ LK E+ ++REL+E++ LL+R SK A GS+
Sbjct: 86 ERMQQEFHGPAEHIYKTNIELKVEVESLKRELQERERLLIRASKAVES----LAEAGGSE 141
Query: 296 SESESED 302
+ ED
Sbjct: 142 IQRVKED 148
>C5P2_HUMAN (Q96SN8) CDK5 regulatory subunit associated protein 2
(CDK5 activator-binding protein C48)
Length = 1893
Score = 32.0 bits (71), Expect = 2.0
Identities = 20/67 (29%), Positives = 33/67 (48%), Gaps = 4/67 (5%)
Query: 236 ENLIMTLDGKDEQKTHENLMLKKELVKVRRELEEKDELLMRDSKRARGRRNFYARYCGSD 295
E + G E N+ LK E+ ++REL+E+++LL++ SK A GS+
Sbjct: 86 ERMQQEFHGPTEHIYKTNIELKVEVESLKRELQEREQLLIKASKAVES----LAEAGGSE 141
Query: 296 SESESED 302
+ ED
Sbjct: 142 IQRVKED 148
>TRHY_HUMAN (Q07283) Trichohyalin
Length = 1898
Score = 31.6 bits (70), Expect = 2.6
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 18/99 (18%)
Query: 215 QEHLAMESREKQMWKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKVRR--------- 265
+E L E REK+ + R + D K +QK E +L +E K RR
Sbjct: 957 EEQLLREEREKRRRQERERQYRK-----DKKLQQK--EEQLLGEEPEKRRRQEREKKYRE 1009
Query: 266 --ELEEKDELLMRDSKRARGRRNFYARYCGSDSESESED 302
EL++++E L+R+ + R R+ + +Y D + E+
Sbjct: 1010 EEELQQEEEQLLREEREKRRRQEWERQYRKKDELQQEEE 1048
>PRX1_CHICK (Q91018) Homeobox prospero-like protein PROX1 (PROX 1)
Length = 736
Score = 31.6 bits (70), Expect = 2.6
Identities = 19/81 (23%), Positives = 39/81 (47%), Gaps = 15/81 (18%)
Query: 221 ESREKQMWKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKVRRELEEKDELLMRDSKR 280
E++ KQ W + ++ +++ + EQK E LK++L ++++L + E
Sbjct: 206 ENKRKQNWPQQQQQSFQQLVS--ARKEQKREERRQLKQQLEDMQKQLRQLQE-------- 255
Query: 281 ARGRRNFYARYCGSDSESESE 301
FY Y +DSE++ +
Sbjct: 256 -----EFYQIYDSTDSENDED 271
>IF2_AQUAE (O67825) Translation initiation factor IF-2
Length = 805
Score = 31.2 bits (69), Expect = 3.4
Identities = 17/73 (23%), Positives = 36/73 (49%)
Query: 209 TTQGMYQEHLAMESREKQMWKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKVRRELE 268
+ + + +E L + +EK+ K E + ++ K E++ E KKE K + ++
Sbjct: 127 SVEELIKEILEKKEKEKEKKKVEKERKEEKVRVVEVKKEERKEEKKEEKKEEEKPKIKMS 186
Query: 269 EKDELLMRDSKRA 281
+K+ +MR + A
Sbjct: 187 KKEREIMRKLEHA 199
>CC37_DROVI (Q24740) Hsp90 co-chaperone Cdc37 (Hsp90 chaperone
protein kinase-targeting subunit)
Length = 399
Score = 31.2 bits (69), Expect = 3.4
Identities = 20/68 (29%), Positives = 34/68 (49%), Gaps = 4/68 (5%)
Query: 216 EHLAMESREKQMWKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKVRRELEEKD---- 271
E +A +EK+ K + + ++ + +K + + LKKEL K+ E +E D
Sbjct: 38 ERMAESEKEKEELKKKRQSYQARLINVKELISKKEGDEVALKKELEKIENEGKELDRQEN 97
Query: 272 ELLMRDSK 279
ELL R+ K
Sbjct: 98 ELLKREKK 105
>ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog
(X-linked nuclear protein-1)
Length = 1359
Score = 31.2 bits (69), Expect = 3.4
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 216 EHLAMESREKQMWKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKVRRELEEKDELLM 275
E +S++K + +E+ + + ++E+K ++ K++ VK R E E+ +
Sbjct: 134 EEREQKSKKKSKKTKKQTSSES---SEESEEERKVKKSKKNKEKSVKKRAETSEESD--- 187
Query: 276 RDSKRARGRRNFYARYCGSDSESESED 302
D K ++ + + S+SESESED
Sbjct: 188 EDEKPSKKSKKGLKKKAKSESESESED 214
>RLP7_KLULA (P32102) Ribosome biogenesis protein RLP7
Length = 318
Score = 30.8 bits (68), Expect = 4.5
Identities = 21/96 (21%), Positives = 42/96 (42%), Gaps = 4/96 (4%)
Query: 211 QGMYQEHLAMESREKQMWKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKVRREL--- 267
Q + ++ E ++K+ K R+ AE ++ T + +KT + E KV+ +L
Sbjct: 27 QELAKKRKEQEEKQKRSKKNRFVRAETIVATTLATEREKTRIRRVRDLENQKVKNDLSHI 86
Query: 268 -EEKDELLMRDSKRARGRRNFYARYCGSDSESESED 302
++D +L + A + + D E E +D
Sbjct: 87 PSDRDFILRISEREAGSKATSESELQDVDEEDEEDD 122
>GRPE_CLOAB (P30726) GrpE protein (HSP-70 cofactor)
Length = 200
Score = 30.8 bits (68), Expect = 4.5
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Query: 215 QEHLAMESREKQMWKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKVRRELEEKDELL 274
QE + +E ++ K + + DE + ENL LK E K++ EL+ + L
Sbjct: 20 QEEIEVEGNSEESSKEEESNNSEI------SDENLSEENLKLKDENEKLKNELDAAKDRL 73
Query: 275 MRDSKRARGRRNFYAR 290
+R S RN A+
Sbjct: 74 LRLSAEYENYRNRTAK 89
>TPM2_YEAST (P40414) Tropomyosin 2
Length = 161
Score = 30.4 bits (67), Expect = 5.8
Identities = 23/95 (24%), Positives = 39/95 (40%), Gaps = 9/95 (9%)
Query: 215 QEHLAMESREKQMWKARYNEAENLIMTLDGKDEQKTHE-------NLMLKKELVKVRREL 267
+E L E + W+ +Y E + L+ + +K +E N L E+ K+ +L
Sbjct: 5 KEKLNSLKLESESWQEKYEELREQLKELEQSNTEKENEIKSLSAKNEQLDSEVEKLESQL 64
Query: 268 EEKDELLMRDSKRARGRRNFYARYCGSDSESESED 302
+ + L DS R Y + D E + ED
Sbjct: 65 SDTKQ-LAEDSNNLRSNNENYTKK-NQDLEQQLED 97
>RA50_METKA (Q8TXI4) DNA double-strand break repair rad50 ATPase
Length = 876
Score = 30.4 bits (67), Expect = 5.8
Identities = 18/47 (38%), Positives = 24/47 (50%)
Query: 234 EAENLIMTLDGKDEQKTHENLMLKKELVKVRRELEEKDELLMRDSKR 280
+AE + L G++E E LK L VRRELE E + R +R
Sbjct: 450 DAEKELERLQGREEDLRKERRELKDRLESVRRELEGTKERMWRLRER 496
>MYSN_ACACA (P05659) Myosin II heavy chain, non muscle
Length = 1509
Score = 30.4 bits (67), Expect = 5.8
Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 223 REKQMWKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKVRRELEEKDELLMRDSKRAR 282
++K+ +A+ E E+ + LDG+ + LK ++ + +R LEE + R K +
Sbjct: 1143 KQKKALEAKLTELEDQVTALDGQKNAAAAQAKTLKTQVDETKRRLEEAEASAARLEKERK 1202
Query: 283 GRRNFYARYCGS-DSESES 300
+ A+ D+E +S
Sbjct: 1203 NALDEVAQLTADLDAERDS 1221
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.318 0.134 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,579,653
Number of Sequences: 164201
Number of extensions: 1760458
Number of successful extensions: 5520
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 5483
Number of HSP's gapped (non-prelim): 58
length of query: 309
length of database: 59,974,054
effective HSP length: 110
effective length of query: 199
effective length of database: 41,911,944
effective search space: 8340476856
effective search space used: 8340476856
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Medicago: description of AC146807.2