BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146794.16 + phase: 0 /pseudo/partial
(1323 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
POL3_DROME (P04323) Retrovirus-related Pol polyprotein from tran... 170 2e-41
POL4_DROME (P10394) Retrovirus-related Pol polyprotein from tran... 168 1e-40
YL52_CAEEL (P34431) Hypothetical protein F44E2.2 in chromosome III 158 1e-37
POL5_DROME (Q8I7P9) Retrovirus-related Pol polyprotein from tran... 158 1e-37
POL2_DROME (P20825) Retrovirus-related Pol polyprotein from tran... 157 1e-37
POLY_DROME (P10401) Retrovirus-related Pol polyprotein from tran... 153 3e-36
RT21_SCHPO (Q05654) Retrotransposable element Tf2 155 kDa protei... 140 3e-32
RT23_SCHPO (Q9UR07) Retrotransposable element Tf2 155 kDa protei... 137 1e-31
RT22_SCHPO (Q9C0R2) Retrotransposable element Tf2 155 kDa protei... 137 1e-31
YRD6_CAEEL (Q09575) Hypothetical protein K02A2.6 in chromosome II 128 1e-28
POL_CAMVE (Q02964) Enzymatic polyprotein [Contains: Aspartic pro... 118 9e-26
POL_CAMVS (P03554) Enzymatic polyprotein [Contains: Aspartic pro... 116 5e-25
POL_CAMVC (P03555) Enzymatic polyprotein [Contains: Aspartic pro... 116 5e-25
POL_CAMVN (Q00962) Enzymatic polyprotein [Contains: Aspartic pro... 112 9e-24
POL_CAMVD (P03556) Enzymatic polyprotein [Contains: Aspartic pro... 110 2e-23
POL_RTBVP (P27502) Polyprotein (P194 protein) [Contains: Coat pr... 107 2e-22
POL_COYMV (P19199) Putative polyprotein [Contains: Coat protein;... 101 2e-20
RRPO_OENBE (P31843) RNA-directed DNA polymerase homolog (Reverse... 98 1e-19
POL_FOAMV (P14350) Pol polyprotein [Contains: Reverse transcript... 98 1e-19
POL_FMVD (P09523) Enzymatic polyprotein [Contains: Aspartic prot... 97 2e-19
>POL3_DROME (P04323) Retrovirus-related Pol polyprotein from
transposon 17.6 [Contains: Protease (EC 3.4.23.-);
Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Length = 1058
Score = 170 bits (431), Expect = 2e-41
Identities = 101/313 (32%), Positives = 174/313 (55%), Gaps = 12/313 (3%)
Query: 1011 KKKIIQLLREYPDIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDM-ALKIK 1069
K+++ LL++Y DI + + + +H I TK P + ++P +++
Sbjct: 170 KQRLCALLQKYHDIQYHEGDKLTFTNQ--TKHTINTKHNLPLYS---KYSYPQAYEQEVE 224
Query: 1070 SEVQKQIDAGFLMTVEYPEWVANIVPVPKKDG-----KVRMCVDFRDLNKASLKDNFPLP 1124
S++Q ++ G + T P + + I VPKK K R+ +D+R LN+ ++ D P+P
Sbjct: 225 SQIQDMLNQGIIRTSNSP-YNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPIP 283
Query: 1125 HIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGA 1184
++D ++ + F+ +D G++QI+M PE KT+F T G + Y MPFGL NA A
Sbjct: 284 NMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAPA 343
Query: 1185 TYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTF 1244
T+QR M + +++K VY+DD+IV ST ++H++ L +FE+L K L+L +KC F
Sbjct: 344 TFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKCEF 403
Query: 1245 GVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTQKQVRGFLGRLNYISRFISHMTATC 1304
+ LG +++ GI+ +P+K+ AI++ P P K+++ FLG Y +FI +
Sbjct: 404 LKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFADIA 463
Query: 1305 GPIFKLLRKNQPI 1317
P+ K L+KN I
Sbjct: 464 KPMTKCLKKNMKI 476
>POL4_DROME (P10394) Retrovirus-related Pol polyprotein from
transposon 412 [Contains: Protease (EC 3.4.23.-); Reverse
transcriptase (EC 2.7.7.49); Endonuclease]
Length = 1237
Score = 168 bits (425), Expect = 1e-40
Identities = 104/319 (32%), Positives = 167/319 (51%), Gaps = 10/319 (3%)
Query: 1011 KKKIIQLLREYPDIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKS 1070
K ++ + EY DIFA E P + + ++ K + P + R H + +I++
Sbjct: 276 KSQLENICSEYIDIFA--LESEPITVNNLYKQQLRLKDDEPVYTKNYRSPHSQVE-EIQA 332
Query: 1071 EVQKQIDAGFLMTVEYPEWVANIVPVPKKDG------KVRMCVDFRDLNKASLKDNFPLP 1124
+VQK I ++ ++ + ++ VPKK K R+ +D+R +NK L D FPLP
Sbjct: 333 QVQKLIKDK-IVEPSVSQYNSPLLLVPKKSSPNSDKKKWRLVIDYRQINKKLLADKFPLP 391
Query: 1125 HIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGA 1184
ID ++D ++K FS +D SG++QI++ R+ TSF T G++ + +PFGL A
Sbjct: 392 RIDDILDQLGRAKYFSCLDLMSGFHQIELDEGSRDITSFSTSNGSYRFTRLPFGLKIAPN 451
Query: 1185 TYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTF 1244
++QR MT F + + +Y+DD+IV E+ ++ LT++F + R+Y L+L+P KC+F
Sbjct: 452 SFQRMMTIAFSGIEPSQAFLYMDDLIVIGCSEKHMLKNLTEVFGKCREYNLKLHPEKCSF 511
Query: 1245 GVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTQKQVRGFLGRLNYISRFISHMTATC 1304
+ LG + KGI D K I+ P P R F+ NY RFI +
Sbjct: 512 FMHEVTFLGHKCTDKGILPDDKKYDVIQNYPVPHDADSARRFVAFCNYYRRFIKNFADYS 571
Query: 1305 GPIFKLLRKNQPIVWNDEC 1323
I +L +KN P W DEC
Sbjct: 572 RHITRLCKKNVPFEWTDEC 590
>YL52_CAEEL (P34431) Hypothetical protein F44E2.2 in chromosome III
Length = 2186
Score = 158 bits (399), Expect = 1e-37
Identities = 90/316 (28%), Positives = 163/316 (51%), Gaps = 3/316 (0%)
Query: 1007 EEGVKKKIIQLLREYPDIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMAL 1066
E G +KI ++ ++ D+FA S +++ E I K P+RQK R +
Sbjct: 899 ENGDDRKIWDVIEQFQDVFAISDDELGRNSG--TECVIELKEGAEPIRQKPRPIPLALKP 956
Query: 1067 KIKSEVQKQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASLKDNFPLPHI 1126
+I+ +QK ++ + + P W + +V V KKDG +RMC+D+R +NK + PLP+I
Sbjct: 957 EIRKMIQKMLNQKVIRESKSP-WSSPVVLVKKKDGSIRMCIDYRKVNKVVKNNAHPLPNI 1015
Query: 1127 DVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATY 1186
+ + + A K+++ D +G+ QI + + +E T+F F + V+PFGL+ + A +
Sbjct: 1016 EATLQSLAGKKLYTVFDMIAGFWQIPLDEKSKEITAFAIGSELFEWNVLPFGLVISPALF 1075
Query: 1187 QRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGV 1246
Q M + D++ VYVDD+++ S D EQH++ + + R+RK ++L +KC
Sbjct: 1076 QGTMEEIIGDLLGVCAFVYVDDLLIASKDMEQHLQDVKEALTRIRKSGMKLRASKCHIAK 1135
Query: 1247 RSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTQKQVRGFLGRLNYISRFISHMTATCGP 1306
+ + LG V+ G+E K +++ P K+++ FLG + Y +FI +
Sbjct: 1136 KEVEYLGHKVTLDGVETQEVKTDKMKQFSRPTNVKELQSFLGLVGYYRKFILNFAQIASS 1195
Query: 1307 IFKLLRKNQPIVWNDE 1322
+ L+ +W E
Sbjct: 1196 LTSLISAKVAWIWEKE 1211
>POL5_DROME (Q8I7P9) Retrovirus-related Pol polyprotein from
transposon opus [Contains: Protease (EC 3.4.23.-);
Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Length = 1003
Score = 158 bits (399), Expect = 1e-37
Identities = 103/319 (32%), Positives = 162/319 (50%), Gaps = 15/319 (4%)
Query: 1002 IGAALEEGVKKKIIQLLREYPDIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTH 1061
+ A +G ++ + LL E+P IF P L M VE + + +++
Sbjct: 76 LAAEHPDGTQEILNSLLGEFPRIFE------PPLSGMSVETAVKAEIRTNTQDPIYAKSY 129
Query: 1062 PDMALKIKSEVQKQIDA----GFLMTVEYPE----WVANIVPVPKKDGKVRMCVDFRDLN 1113
P + ++ EV++QID G + P W+ P P + + RM VDF+ LN
Sbjct: 130 P-YPVNMRGEVERQIDELLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLN 188
Query: 1114 KASLKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYK 1173
++ D +P+P I+ + + +K F+ +D SG++QI M D KT+F T G + +
Sbjct: 189 TVTIPDTYPIPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFL 248
Query: 1174 VMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKY 1233
+PFGL NA A +QR + + + I K VY+DD+IV S D + H + L + L K
Sbjct: 249 RLPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKA 308
Query: 1234 KLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTQKQVRGFLGRLNYI 1293
L++N K F + LG+IV+ GI+ DP KVRAI EMP P + K+++ FLG +Y
Sbjct: 309 NLQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYY 368
Query: 1294 SRFISHMTATCGPIFKLLR 1312
+FI P+ L R
Sbjct: 369 RKFIQDYAKVAKPLTNLTR 387
>POL2_DROME (P20825) Retrovirus-related Pol polyprotein from
transposon 297 [Contains: Protease (EC 3.4.23.-); Reverse
transcriptase (EC 2.7.7.49); Endonuclease]
Length = 1059
Score = 157 bits (398), Expect = 1e-37
Identities = 89/284 (31%), Positives = 152/284 (53%), Gaps = 9/284 (3%)
Query: 1040 VEHRIPTKPECPPVRQK--LRRTHPDMALKIKSEVQKQIDAGFLMT----VEYPEWVANI 1093
++H + T P ++ L +TH ++++++VQ+ ++ G + P WV
Sbjct: 195 IKHVLNTTHNSPIYSKQYPLAQTHE---IEVENQVQEMLNQGLIRESNSPYNSPTWVVPK 251
Query: 1094 VPVPKKDGKVRMCVDFRDLNKASLKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKM 1153
P K R+ +D+R LN+ ++ D +P+P++D ++ + + F+ +D G++QI+M
Sbjct: 252 KPDASGANKYRVVIDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEM 311
Query: 1154 SPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKS 1213
E KT+F T G + Y MPFGL NA AT+QR M + +++K VY+DD+I+ S
Sbjct: 312 DEESISKTAFSTKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFS 371
Query: 1214 TDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIRE 1273
T +H+ + +F +L L+L +KC F + LG IV+ GI+ +P KV+AI
Sbjct: 372 TSLTEHLNSIQLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVS 431
Query: 1274 MPAPQTQKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPI 1317
P P K++R FLG Y +FI + P+ L+K I
Sbjct: 432 YPIPTKDKEIRAFLGLTGYYRKFIPNYADIAKPMTSCLKKRTKI 475
>POLY_DROME (P10401) Retrovirus-related Pol polyprotein from
transposon gypsy [Contains: Reverse transcriptase (EC
2.7.7.49); Endonuclease]
Length = 1035
Score = 153 bits (386), Expect = 3e-36
Identities = 80/209 (38%), Positives = 125/209 (59%)
Query: 1104 RMCVDFRDLNKASLKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSF 1163
R+ +DFR LN+ ++ D +P+P I +++ N ++K F+ +D SGY+QI ++ DREKTSF
Sbjct: 238 RLVIDFRKLNEKTIPDRYPMPSIPMILANLGKAKFFTTLDLKSGYHQIYLAEHDREKTSF 297
Query: 1164 ITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYL 1223
G + + +PFGL NA + +QR + + + I K VYVDD+I+ S +E HV ++
Sbjct: 298 SVNGGKYEFCRLPFGLRNASSIFQRALDDVLREQIGKICYVYVDDVIIFSENESDHVRHI 357
Query: 1224 TKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTQKQV 1283
+ + L +R++ K F S + LGFIVS+ G + DP+KV+AI+E P P +V
Sbjct: 358 DTVLKCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKV 417
Query: 1284 RGFLGRLNYISRFISHMTATCGPIFKLLR 1312
R FLG +Y FI A PI +L+
Sbjct: 418 RSFLGLASYYRVFIKDFAAIARPITDILK 446
>RT21_SCHPO (Q05654) Retrotransposable element Tf2 155 kDa protein
type 1
Length = 1333
Score = 140 bits (352), Expect = 3e-32
Identities = 72/224 (32%), Positives = 125/224 (55%)
Query: 1096 VPKKDGKVRMCVDFRDLNKASLKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSP 1155
VPKK+G +RM VD++ LNK + +PLP I+ L+ S +F+ +D S Y+ I++
Sbjct: 455 VPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRK 514
Query: 1156 EDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTD 1215
D K +F P G F Y VMP+G+ A A +Q + T+ + V Y+DD+++ S
Sbjct: 515 GDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKS 574
Query: 1216 EEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMP 1275
E +HV+++ + ++L+ L +N KC F K +G+ +S+KG + + + +
Sbjct: 575 ESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWK 634
Query: 1276 APQTQKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPIVW 1319
P+ +K++R FLG +NY+ +FI + P+ LL+K+ W
Sbjct: 635 QPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKW 678
>RT23_SCHPO (Q9UR07) Retrotransposable element Tf2 155 kDa protein
type 3
Length = 1333
Score = 137 bits (346), Expect = 1e-31
Identities = 71/224 (31%), Positives = 126/224 (55%)
Query: 1096 VPKKDGKVRMCVDFRDLNKASLKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSP 1155
VPKK+G +RM VD++ LNK + +PLP I+ L+ S +F+ +D S Y+ I++
Sbjct: 455 VPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRK 514
Query: 1156 EDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTD 1215
D K +F P G F Y VMP+G+ A A +Q + T+ ++ V Y+D++++ S
Sbjct: 515 GDEHKLAFRCPRGVFEYLVMPYGISIAPAHFQYFINTILGEVKESHVVCYMDNILIHSKS 574
Query: 1216 EEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMP 1275
E +HV+++ + ++L+ L +N KC F K +G+ +S+KG + + + +
Sbjct: 575 ESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWK 634
Query: 1276 APQTQKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPIVW 1319
P+ +K++R FLG +NY+ +FI + P+ LL+K+ W
Sbjct: 635 QPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKW 678
>RT22_SCHPO (Q9C0R2) Retrotransposable element Tf2 155 kDa protein
type 2
Length = 1333
Score = 137 bits (346), Expect = 1e-31
Identities = 71/224 (31%), Positives = 126/224 (55%)
Query: 1096 VPKKDGKVRMCVDFRDLNKASLKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSP 1155
VPKK+G +RM VD++ LNK + +PLP I+ L+ S +F+ +D S Y+ I++
Sbjct: 455 VPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRK 514
Query: 1156 EDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTD 1215
D K +F P G F Y VMP+G+ A A +Q + T+ ++ V Y+D++++ S
Sbjct: 515 GDEHKLAFRCPRGVFEYLVMPYGISIAPAHFQYFINTILGEVKESHVVCYMDNILIHSKS 574
Query: 1216 EEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMP 1275
E +HV+++ + ++L+ L +N KC F K +G+ +S+KG + + + +
Sbjct: 575 ESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWK 634
Query: 1276 APQTQKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPIVW 1319
P+ +K++R FLG +NY+ +FI + P+ LL+K+ W
Sbjct: 635 QPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKW 678
>YRD6_CAEEL (Q09575) Hypothetical protein K02A2.6 in chromosome II
Length = 1268
Score = 128 bits (321), Expect = 1e-28
Identities = 91/287 (31%), Positives = 150/287 (51%), Gaps = 14/287 (4%)
Query: 1015 IQLLREYPDIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKSEVQK 1074
+ L ++P++F +D GL + T+ PV ++ R +++E+ +
Sbjct: 408 VMLKNDFPEVF----KDGLGLCTK-EKAEFRTEENAVPVFKRARPVPYGSLEAVETELNR 462
Query: 1075 QIDAGFLMTVEYPEWVANIVPVPKKD-GKVRMCVDFR--DLNKASLKDNF-PLPHIDVLV 1130
+ G ++ + Y +W A IV + KK GK+R+C DF+ LN A+LKD F PLP + +
Sbjct: 463 LQEMGVIVPITYAKWAAPIVVIKKKGTGKIRVCADFKCSGLN-AALKDEFHPLPTSEDIF 521
Query: 1131 DNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGM 1190
+ V+S +D Y Q+++ E ++ T G F Y M FGL A A++Q+ M
Sbjct: 522 SRL-KGTVYSQIDLKDAYLQVELDEEAQKLAVINTHRGIFKYLRMTFGLKPAPASFQKIM 580
Query: 1191 TTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGK 1250
+ + V VY DD+I+ ++ E+H + L ++FER ++Y R++ KC F +
Sbjct: 581 DKMVSGLTG--VAVYWDDIIISASSIEEHEKILRELFERFKEYGFRVSAEKCAFAQKQVT 638
Query: 1251 LLGFIVSQKGIEVDPDKVRAIREMPAPQTQKQVRGFLGRLNYISRFI 1297
LGF V + G D K AIR M AP QKQ+ FLG +++SR +
Sbjct: 639 FLGF-VDEHGRRPDSKKTEAIRSMKAPTDQKQLASFLGAADWLSRMM 684
>POL_CAMVE (Q02964) Enzymatic polyprotein [Contains: Aspartic protease
(EC 3.4.23.-); Endonuclease; Reverse transcriptase (EC
2.7.7.49)]
Length = 679
Score = 118 bits (296), Expect = 9e-26
Identities = 104/400 (26%), Positives = 184/400 (46%), Gaps = 26/400 (6%)
Query: 940 SDNPAFPPNFEFPVYEAEDEEGDDIPYEITRLLEQEKKAIQPH*EEIELINIGTEENKRE 999
+D F N +PV+ A+ + E LE KK + ++ E +NI T + +
Sbjct: 129 TDRVIFTKNKSYPVHIAKLTRAVRVGTE--GFLESMKKRSKT--QQPEPVNISTNKIENP 184
Query: 1000 IKIGAALEEGVKKKIIQLLREYPDIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRR 1059
+K A L EG + +L + E++ L+ + E+ + ++ ++
Sbjct: 185 LKEIAILSEGRRLSEEKLFITQQRM--QKIEEL--LEKVCSENPLDPNKTKQWMKASIKL 240
Query: 1060 THPDMALKIK---------SEVQKQIDAGFLMTVEYPEWVANIVPV-------PKKDGKV 1103
+ P A+K+K E KQI + V P ++ P K+ GK
Sbjct: 241 SDPSKAIKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKK 300
Query: 1104 RMCVDFRDLNKASLKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSF 1163
RM V+++ +NKA++ D + LP+ D L+ K+FS D SG+ Q+ + E R T+F
Sbjct: 301 RMVVNYKAMNKATIGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAF 360
Query: 1164 ITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYL 1223
P G + + V+PFGL A + +QR M F + K VYVDD++V S +EE H+ ++
Sbjct: 361 TCPQGHYEWNVVPFGLKQAPSIFQRHMDEAFR-VFRKFCCVYVDDILVFSNNEEDHLLHV 419
Query: 1224 TKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMP-APQTQKQ 1282
+ ++ ++ + L+ K + LG + + + + I + P + +KQ
Sbjct: 420 AMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQ 479
Query: 1283 VRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPIVWNDE 1322
++ FLG L Y S +I + P+ L++N P W E
Sbjct: 480 LQRFLGILTYASDYIPKLAQIRKPLQAKLKENVPWKWTKE 519
>POL_CAMVS (P03554) Enzymatic polyprotein [Contains: Aspartic protease
(EC 3.4.23.-); Endonuclease; Reverse transcriptase (EC
2.7.7.49)]
Length = 679
Score = 116 bits (290), Expect = 5e-25
Identities = 103/400 (25%), Positives = 184/400 (45%), Gaps = 26/400 (6%)
Query: 940 SDNPAFPPNFEFPVYEAEDEEGDDIPYEITRLLEQEKKAIQPH*EEIELINIGTEENKRE 999
+D F N +PV+ A+ + E LE KK + ++ E +NI T + +
Sbjct: 129 TDRVIFTKNKSYPVHIAKLTRAVRVGTE--GFLESMKKRSKT--QQPEPVNISTNKIENP 184
Query: 1000 IKIGAALEEGVKKKIIQLLREYPDIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRR 1059
++ A L EG + +L + E++ L+ + E+ + ++ ++
Sbjct: 185 LEEIAILSEGRRLSEEKLFITQQRM--QKIEEL--LEKVCSENPLDPNKTKQWMKASIKL 240
Query: 1060 THPDMALKIK---------SEVQKQIDAGFLMTVEYPEWVANIVPV-------PKKDGKV 1103
+ P A+K+K E KQI + V P ++ P K+ GK
Sbjct: 241 SDPSKAIKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKK 300
Query: 1104 RMCVDFRDLNKASLKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSF 1163
RM V+++ +NKA++ D + LP+ D L+ K+FS D SG+ Q+ + E R T+F
Sbjct: 301 RMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAF 360
Query: 1164 ITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYL 1223
P G + + V+PFGL A + +QR M F + K VYVDD++V S +EE H+ ++
Sbjct: 361 TCPQGHYEWNVVPFGLKQAPSIFQRHMDEAFR-VFRKFCCVYVDDILVFSNNEEDHLLHV 419
Query: 1224 TKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMP-APQTQKQ 1282
+ ++ ++ + L+ K + LG + + + + I + P + +KQ
Sbjct: 420 AMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQ 479
Query: 1283 VRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPIVWNDE 1322
++ FLG L Y S +I + P+ L++N P W E
Sbjct: 480 LQRFLGILTYASDYIPKLAQIRKPLQAKLKENVPWRWTKE 519
>POL_CAMVC (P03555) Enzymatic polyprotein [Contains: Aspartic protease
(EC 3.4.23.-); Endonuclease; Reverse transcriptase (EC
2.7.7.49)]
Length = 679
Score = 116 bits (290), Expect = 5e-25
Identities = 102/400 (25%), Positives = 183/400 (45%), Gaps = 26/400 (6%)
Query: 940 SDNPAFPPNFEFPVYEAEDEEGDDIPYEITRLLEQEKKAIQPH*EEIELINIGTEENKRE 999
+D F N +PV+ + + I LE KK + ++ E +NI T + +
Sbjct: 129 TDRVIFTKNKSYPVHITKLTRA--VRVGIEGFLESMKKRSKT--QQPEPVNISTNKIENP 184
Query: 1000 IKIGAALEEGVKKKIIQLLREYPDIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRR 1059
++ A L EG + +L + E++ L+ + E+ + ++ ++
Sbjct: 185 LEEIAILSEGRRLSEEKLFITQQRM--QKIEEL--LEKVCSENPLDPNKTKQWMKASIKL 240
Query: 1060 THPDMALKIK---------SEVQKQIDAGFLMTVEYPEWVANIVPV-------PKKDGKV 1103
+ P A+K+K E KQI + V P ++ P K+ GK
Sbjct: 241 SDPSKAIKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKK 300
Query: 1104 RMCVDFRDLNKASLKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSF 1163
RM V+++ +NKA++ D + LP+ D L+ K+FS D SG+ Q+ + E R T+F
Sbjct: 301 RMVVNYKAMNKATIGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAF 360
Query: 1164 ITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYL 1223
P G + + V+PFGL A + +QR M F + K VYVDD++V S +EE H+ ++
Sbjct: 361 TCPQGHYEWNVVPFGLKQAPSIFQRHMDEAFR-VFRKFCCVYVDDILVFSNNEEDHLLHV 419
Query: 1224 TKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMP-APQTQKQ 1282
+ ++ ++ + L+ K + LG + + + + I + P + +KQ
Sbjct: 420 AMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQ 479
Query: 1283 VRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPIVWNDE 1322
++ FLG L Y S +I + P+ L++N P W E
Sbjct: 480 LQRFLGILTYASDYIPKLAQIRKPLQAKLKENVPWKWTKE 519
>POL_CAMVN (Q00962) Enzymatic polyprotein [Contains: Aspartic protease
(EC 3.4.23.-); Endonuclease; Reverse transcriptase (EC
2.7.7.49)]
Length = 680
Score = 112 bits (279), Expect = 9e-24
Identities = 101/400 (25%), Positives = 182/400 (45%), Gaps = 26/400 (6%)
Query: 940 SDNPAFPPNFEFPVYEAEDEEGDDIPYEITRLLEQEKKAIQPH*EEIELINIGTEENKRE 999
+D F N +PV+ A+ + E LE KK + ++ E +NI T + +
Sbjct: 130 TDRVIFTKNKSYPVHIAKLTRAVRVGTE--GFLESMKKRSKT--QQPEPVNISTNKIENP 185
Query: 1000 IKIGAALEEGVKKKIIQLLREYPDIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRR 1059
++ A L EG + +L + E++ L+ + E+ + ++ ++
Sbjct: 186 LEEIAILSEGRRLSEEKLFITQQRM--QKTEEL--LEKVCSENPLDPNKTKQWMKASIKL 241
Query: 1060 THPDMALKIK---------SEVQKQIDAGFLMTVEYPEWVANIVPV-------PKKDGKV 1103
+ P A+K+K E KQI + V P ++ P G
Sbjct: 242 SDPSKAIKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAENGRGNK 301
Query: 1104 RMCVDFRDLNKASLKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSF 1163
RM V+++ +NKA++ D + LP+ D L+ K+FS D SG+ Q+ + E R T+F
Sbjct: 302 RMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAF 361
Query: 1164 ITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYL 1223
P G + + V+PFGL A + +QR M F + K VYVDD++V S +EE H+ ++
Sbjct: 362 TCPQGHYEWNVVPFGLKQAPSIFQRHMDEAFR-VFRKFCCVYVDDIVVFSNNEEDHLLHV 420
Query: 1224 TKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMP-APQTQKQ 1282
+ ++ ++ + L+ K + LG + + + + I + P + +KQ
Sbjct: 421 AMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQ 480
Query: 1283 VRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPIVWNDE 1322
++ FLG L Y S +I ++ P+ L++N P W E
Sbjct: 481 LQRFLGILTYASDYIPNLAQMRQPLQAKLKENVPWKWTKE 520
>POL_CAMVD (P03556) Enzymatic polyprotein [Contains: Aspartic protease
(EC 3.4.23.-); Endonuclease; Reverse transcriptase (EC
2.7.7.49)]
Length = 674
Score = 110 bits (276), Expect = 2e-23
Identities = 79/287 (27%), Positives = 138/287 (47%), Gaps = 18/287 (6%)
Query: 1053 VRQKLRRTHPDMALKIK---------SEVQKQIDAGFLMTVEYPEWVANIVPV------- 1096
++ ++ + P A+K+K E KQI + V P ++ P
Sbjct: 229 MKASIKLSDPSKAIKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEA 288
Query: 1097 PKKDGKVRMCVDFRDLNKASLKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPE 1156
K+ GK RM V+++ +NKA++ D + P+ D L+ K+FS D SG+ Q+ + E
Sbjct: 289 EKRRGKKRMVVNYKAMNKATVGDAYNPPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQE 348
Query: 1157 DREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDE 1216
R T+F P G + + V+PFGL A + +QR M F + K VYVDD++V S +E
Sbjct: 349 SRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQRHMDEAFR-VFRKFCCVYVDDILVFSNNE 407
Query: 1217 EQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMP- 1275
E H+ ++ + ++ ++ + L+ K + LG + + + + I + P
Sbjct: 408 EDHLLHVAMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPD 467
Query: 1276 APQTQKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPIVWNDE 1322
+ +KQ++ FLG L Y S +I + P+ L++N P W E
Sbjct: 468 TLEDKKQLQRFLGILTYASDYIPKLAQIRKPLQAKLKENVPWKWTKE 514
>POL_RTBVP (P27502) Polyprotein (P194 protein) [Contains: Coat
protein; Protease (EC 3.4.23.-); Reverse transcriptase
(EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
Length = 1675
Score = 107 bits (268), Expect = 2e-22
Identities = 61/223 (27%), Positives = 119/223 (53%), Gaps = 4/223 (1%)
Query: 1102 KVRMCVDFRDLNKASLKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKT 1161
K R+ +++ LN D F +PH +++ ++ +FS D +G++ +K+ + ++ T
Sbjct: 1238 KPRIVYNYKRLNDNMHTDPFNIPHKISMINLIQKANIFSKFDLKAGFHHMKLKDDFKDWT 1297
Query: 1162 SFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVE 1221
+F G + + V PFG+ NA +QR M F D+ K +Y+DD+++ S +E++H+E
Sbjct: 1298 TFTCSEGLYTWNVCPFGIANAPCAFQRFMQESFGDL--KFALLYIDDILIASNNEKEHIE 1355
Query: 1222 YLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQ--T 1279
+L F R+++ L+ K ++ + LG + + I + P V I++ + T
Sbjct: 1356 HLKIFFNRVKEVGCVLSKKKSKMFLKEVEYLGVEIKEGKISLQPHIVDKIKKFDKNKLNT 1415
Query: 1280 QKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPIVWNDE 1322
K ++ +LG LNY +I ++ GP++K KN ++N E
Sbjct: 1416 LKGLQAYLGLLNYARGYIKDLSKLVGPLYKKTGKNGQRIFNKE 1458
>POL_COYMV (P19199) Putative polyprotein [Contains: Coat protein;
Protease (EC 3.4.23.-); Reverse transcriptase (EC
2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
Length = 1886
Score = 101 bits (251), Expect = 2e-20
Identities = 65/212 (30%), Positives = 109/212 (50%), Gaps = 3/212 (1%)
Query: 1098 KKDGKVRMCVDFRDLNKASLKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPED 1157
+K GK RM +++ LN+ + D + LP I+ ++ +SK++S D SG+ Q+ M E
Sbjct: 1458 EKKGKERMVFNYKLLNENTESDQYSLPGINTIISKVGRSKIYSKFDLKSGFWQVAMEEES 1517
Query: 1158 REKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEE 1217
T+F+ + + VMPFGL NA A +QR M +F K + VY+DD++V S E
Sbjct: 1518 VPWTAFLAGNKLYEWLVMPFGLKNAPAIFQRKMDNVFKG-TEKFIAVYIDDILVFSETAE 1576
Query: 1218 QHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAP 1277
QH ++L M + ++ L L+P K G LG + I++ P + I +
Sbjct: 1577 QHSQHLYTMLQLCKENGLILSPTKMKIGTPEIDFLGASLGCTKIKLQPHIISKICDFSDE 1636
Query: 1278 Q--TQKQVRGFLGRLNYISRFISHMTATCGPI 1307
+ T + +R +LG L+Y +I + P+
Sbjct: 1637 KLATPEGMRSWLGILSYARNYIQDIGKLVQPL 1668
>RRPO_OENBE (P31843) RNA-directed DNA polymerase homolog (Reverse
transcriptase homolog)
Length = 142
Score = 98.2 bits (243), Expect = 1e-19
Identities = 47/124 (37%), Positives = 81/124 (64%), Gaps = 3/124 (2%)
Query: 1103 VRMCVDFRDLNKASLKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTS 1162
+RMC+D+R L K ++K+ +P+P +D L D AQ+ F+ +D SGY Q++++ D KT+
Sbjct: 6 LRMCIDYRALTKVTIKNKYPIPRVDDLFDRLAQATWFTKLDLRSGYWQVRIAKGDEPKTT 65
Query: 1163 FITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIV---KSTDEEQH 1219
+T +G+F ++VMPFGL NA AT+ M + ++ + V VY+DD++V S +H
Sbjct: 66 CVTRYGSFEFRVMPFGLTNALATFCNLMNNVLYEYLDHFVVVYLDDLVVYTIYSNSLHEH 125
Query: 1220 VEYL 1223
+++L
Sbjct: 126 IKHL 129
>POL_FOAMV (P14350) Pol polyprotein [Contains: Reverse
transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4)
(RT); Integrase (IN)]
Length = 886
Score = 98.2 bits (243), Expect = 1e-19
Identities = 60/232 (25%), Positives = 117/232 (49%), Gaps = 4/232 (1%)
Query: 1093 IVPVPKKDGKVRMCVDFRDLNKASLKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIK 1152
+ PVPK DG+ RM +D+R++NK H ++ + K + +D +G+
Sbjct: 5 VYPVPKPDGRWRMVLDYREVNKTIPLTAAQNQHSAGILATIVRQKYKTTLDLANGFWAHP 64
Query: 1153 MSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVK 1212
++PE T+F +C+ +P G +N+ A + + L ++ V+VYVDD+ +
Sbjct: 65 ITPESYWLTAFTWQGKQYCWTRLPQGFLNSPALFTADVVDLLKEI--PNVQVYVDDIYLS 122
Query: 1213 STDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIR 1272
D ++HV+ L K+F+ L + ++ K G ++ + LGF ++++G + +
Sbjct: 123 HDDPKEHVQQLEKVFQILLQAGYVVSLKKSEIGQKTVEFLGFNITKEGRGLTDTFKTKLL 182
Query: 1273 EMPAPQTQKQVRGFLGRLNYISRFISHMTATCGPIFKLL--RKNQPIVWNDE 1322
+ P+ KQ++ LG LN+ FI + P++ L+ K + I W++E
Sbjct: 183 NITPPKDLKQLQSILGLLNFARNFIPNFAELVQPLYNLIASAKGKYIEWSEE 234
>POL_FMVD (P09523) Enzymatic polyprotein [Contains: Aspartic protease
(EC 3.4.23.-); Endonuclease; Reverse transcriptase (EC
2.7.7.49)]
Length = 666
Score = 97.4 bits (241), Expect = 2e-19
Identities = 67/225 (29%), Positives = 114/225 (49%), Gaps = 6/225 (2%)
Query: 1098 KKDGKVRMCVDFRDLNKASLKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPED 1157
++ GK RM V+++ +N+A++ D+ LP++ L+ +FS D SG+ Q+ + E
Sbjct: 288 RRRGKKRMVVNYKAINQATIGDSHNLPNMQELLTLLRGKSIFSSFDCKSGFWQVVLDEES 347
Query: 1158 REKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEE 1217
++ T+F P G F +KV+PFGL A + +QR M T + K VYVDD+IV S E
Sbjct: 348 QKLTAFTCPQGHFQWKVVPFGLKQAPSIFQRHMQTALNG-ADKFCMVYVDDIIVFSNSEL 406
Query: 1218 QHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKV-RAIREMP- 1275
H ++ + + + KY + L+ K LG + KG + + I + P
Sbjct: 407 DHYNHVYAVLKIVEKYGIILSKKKANLFKEKINFLGLEI-DKGTHCPQNHILENIHKFPD 465
Query: 1276 APQTQKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPIVWN 1320
+ +K ++ FLG L Y +I + P+ L+K+ + WN
Sbjct: 466 RLEDKKHLQRFLGVLTYAETYIPKLAEIRKPLQVKLKKD--VTWN 508
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.319 0.137 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 162,763,553
Number of Sequences: 164201
Number of extensions: 7456826
Number of successful extensions: 25367
Number of sequences better than 10.0: 244
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 188
Number of HSP's that attempted gapping in prelim test: 24118
Number of HSP's gapped (non-prelim): 726
length of query: 1323
length of database: 59,974,054
effective HSP length: 122
effective length of query: 1201
effective length of database: 39,941,532
effective search space: 47969779932
effective search space used: 47969779932
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 72 (32.3 bits)
Medicago: description of AC146794.16