BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146790.7 + phase: 0
(546 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DRPL_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atr... 72 5e-12
AMYH_YEAST (P08640) Glucoamylase S1/S2 precursor (EC 3.2.1.3) (G... 65 6e-10
YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I 63 2e-09
LA_AEDAL (Q26457) La protein homolog (La ribonucleoprotein) (La ... 61 7e-09
LA_RAT (P38656) Lupus La protein homolog (La ribonucleoprotein) ... 60 1e-08
LA_DROME (P40796) La protein homolog (La ribonucleoprotein) (La ... 60 2e-08
EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline... 59 2e-08
LA_HUMAN (P05455) Lupus La protein (Sjogren syndrome type B anti... 59 3e-08
LA_BOVIN (P10881) Lupus La protein homolog (La ribonucleoprotein... 59 3e-08
LA_MOUSE (P32067) Lupus La protein homolog (La ribonucleoprotein... 58 6e-08
ENAH_MOUSE (Q03173) Enabled protein homolog (NPC derived proline... 58 7e-08
PCLO_RAT (Q9JKS6) Piccolo protein (Multidomain presynaptic cytom... 56 3e-07
LAH1_SCHPO (P87058) La protein homolog (La ribonucleoprotein) (L... 56 3e-07
GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor (H... 55 5e-07
LAH1_YEAST (P33399) La protein homolog (La ribonucleoprotein) (L... 55 6e-07
YK82_MYCTU (Q10690) Hypothetical protein Rv2082 54 8e-07
PCLO_HUMAN (Q9Y6V0) Piccolo protein (Aczonin) 54 8e-07
LAB_XENLA (P28049) Lupus La protein homolog B (La ribonucleoprot... 54 1e-06
SRO9_YEAST (P25567) SRO9 protein 53 2e-06
LAA_XENLA (P28048) Lupus La protein homolog A (La ribonucleoprot... 53 2e-06
>DRPL_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian
atrophy protein)
Length = 1185
Score = 71.6 bits (174), Expect = 5e-12
Identities = 103/395 (26%), Positives = 138/395 (34%), Gaps = 55/395 (13%)
Query: 2 VTTQNNHSPTSVPSP----APPSAETNNPNFIRKNLPSPWAQVVRGGSGWDTESQSQSPT 57
VT H+P P+ APP A +P + G G S P
Sbjct: 189 VTPTGYHAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPN 248
Query: 58 GIHQSLPSSSSSSSSSLTTVDQPP---PSDDSPKAAVVSSSPKA----VVVSSPLPAPME 110
G Q P ++ S SS PP P+ + S+ P A V + P P +
Sbjct: 249 GGKQHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALR 308
Query: 111 KNSNTIASDGGDGGNA--GGSKKPAWNKQPLNGVAVEIGPVMGAESWPALSESAKIPGKL 168
+N AS G G G P Q + G+ G E P L+ S P L
Sbjct: 309 PLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPP------GPEKGPTLAPS---PHSL 359
Query: 169 PPESSSSKIAPPAAVDGSPSTSQGPIISHSPQRQGSTSNTKSSSMANNNLPNRPRPMRRI 228
PP +SSS APP S S+S S S S+++ +S A + P+ P +
Sbjct: 360 PP-ASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSL 418
Query: 229 SGSNIGPCPAQSSLSNPPT----PPPLPPYPVYQLPPAVSYPNMLP--------SIPDSS 276
S SN P Q SL + PPP PPY L + ++P P + P S
Sbjct: 419 SVSNQPPKYTQPSLPSQAVWSQGPPPPPPYG-RLLANSNAHPGPFPPSTGAQSTAHPPVS 477
Query: 277 PRDHHRNNNWDARPFVGGSSRRGHFGSHPRGDGSYHQNSYSSRREHDRGNYANTRDAHAP 336
HH + G+ G P G + SS H P
Sbjct: 478 THHHHHQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAH-------------P 524
Query: 337 QPRMPPRGILRPPPPSTAAFLGPQTIGPFPAPVAY 371
P G LRP PP GP + P + V+Y
Sbjct: 525 YAMSPSLGSLRPYPP------GPAHLPPPHSQVSY 553
Score = 41.2 bits (95), Expect = 0.007
Identities = 79/352 (22%), Positives = 111/352 (31%), Gaps = 44/352 (12%)
Query: 48 DTESQSQSPTGIHQSLPSSSSSSSSSLTT------------VDQPPPSDDSPKAAVVSSS 95
D +++S SP+ + S SSS L+ P P D +P+ S
Sbjct: 125 DQDNRSTSPSIYSPGSVENDSDSSSGLSQGPARPYHPPPLFPPSPQPPDSTPRQPEASFE 184
Query: 96 PKAVVVSSPLPAPMEKNSNTIASDGGDGGNAGGSKKPAWNKQPLNGVAVEIGPVMGAESW 155
P V + APME ++ + G+ P P V GP MG +
Sbjct: 185 PHPSVTPTGYHAPMEPPTSRMFQ------APPGAPPPHPQLYPGGTGGVLSGPPMGPKGG 238
Query: 156 PALSESAKIPGKLPPESSSSKIAPPAAVDGSPSTSQGPIISHSPQRQGSTSNTKSSSMAN 215
A S P P + S S + G + P N S+
Sbjct: 239 GAASSVG------GPNGGKQHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPA 292
Query: 216 N------NLPNRP--RPMRRISGS--NIGPCPAQSSLSNPPTPPP----LPPYPVYQLPP 261
N NLP P RP+ S S +G P L +P LPP P + P
Sbjct: 293 NFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGP-EKGPT 351
Query: 262 AVSYPNMLPSIPDSSPRDHHR--NNNWDARPFVGGSSRRGHFGSHPRGDGSYHQNSYSSR 319
P+ LP S+P R ++ + SS S S SY
Sbjct: 352 LAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHS 411
Query: 320 REHDRGNYANTRDAHAPQPRMPPRGILR---PPPPSTAAFLGPQTIGPFPAP 368
+ + QP +P + + PPPP L P P P
Sbjct: 412 FPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFP 463
Score = 40.8 bits (94), Expect = 0.009
Identities = 88/406 (21%), Positives = 127/406 (30%), Gaps = 97/406 (23%)
Query: 10 PTSVPSP--APPSAETNNPNFIRKNLPSPWAQVVRGGSGWDTESQSQSPTGIHQSLPSSS 67
PT PSP PP++ + +R S + S + S S SP Q+LPS
Sbjct: 350 PTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYP 409
Query: 68 SS--SSSSLTTVDQPPP--SDDSPKAAVVSSSP-------KAVVVSSPLPAPMEKNSNTI 116
S +SL+ +QPP P AV S P + + S+ P P ++
Sbjct: 410 HSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQ 469
Query: 117 AS-----------------------DGGDGGNAGGSKKPAWNKQPLNGVAVEIGPVMGAE 153
++ GN+G A+ G + P +
Sbjct: 470 STAHPPVSTHHHHHQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSP 529
Query: 154 SWPALSESAKIPGKLPPESSSSKIAPPAAVDGSPSTSQGPIISHSPQRQGSTSNTK---- 209
S +L P LPP P + V S + GP +S S STS
Sbjct: 530 SLGSLRPYPPGPAHLPP--------PHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCS 581
Query: 210 --SSSMANNNLPNRPRPMRRISGSN---------IGPCPAQSSLSNPPTPPPL----PPY 254
S S P P+ ++ S+ + PA ++PP PPP P
Sbjct: 582 HPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSP 641
Query: 255 PVYQLPPAVSY-PNMLPSIPDSSPRDHHRNNNWDARPFVGGSSRRGHFGSHPRGDGSYHQ 313
Y+ Y P PS +P + S P G G++
Sbjct: 642 GAYKTATPPGYKPGSPPSFRTGTPPGYRGT-------------------SPPAGPGTFKP 682
Query: 314 NSYSSRREHDRGNYANTRDAHAPQPRMPPRGILRPPPPSTAAFLGP 359
S + P P P G+ PPP A GP
Sbjct: 683 GSPTV--------------GPGPLPPAGPSGLPSLPPPPAAPASGP 714
Score = 34.3 bits (77), Expect = 0.86
Identities = 64/252 (25%), Positives = 84/252 (32%), Gaps = 57/252 (22%)
Query: 32 NLPSPWAQVVRGGSGWDTESQSQSPTGIHQSLPSSSSSSSSSLTTVDQPPPSDDSPKAAV 91
+LP P +QV +G P G P SSSS+SSS T+ P S SP
Sbjct: 543 HLPPPHSQVSYSQAG---------PNGP----PVSSSSNSSSSTSQGSYPCSHPSP---- 585
Query: 92 VSSSPKAVVVSSPLPAPMEKNSN--------TIASDGGDGGNAGGSKKPAWNKQ-PLNGV 142
S P+ P P P S+ T+AS A P + K+ P G
Sbjct: 586 -SQGPQGAPYPFP-PVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGA 643
Query: 143 AVEIGPVMGAESWPALSESAKIPGKLPPESSSSKIAPPAAVDGSPSTSQGPIISHSPQRQ 202
P P + PG +S P GSP+ GP+ P
Sbjct: 644 YKTATPPGYKPGSPPSFRTGTPPGY---RGTSPPAGPGTFKPGSPTVGPGPLPPAGP--- 697
Query: 203 GSTSNTKSSSMANNNLPNRPRPMRR------ISGSNIGPCPAQS-SLSNPPTPP---PLP 252
+ LP+ P P +S + I PA+ P PP P P
Sbjct: 698 -------------SGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSPSP 744
Query: 253 PYPVYQLPPAVS 264
P V +P S
Sbjct: 745 PPKVVDVPSHAS 756
Score = 31.2 bits (69), Expect = 7.2
Identities = 12/39 (30%), Positives = 19/39 (47%)
Query: 219 PNRPRPMRRISGSNIGPCPAQSSLSNPPTPPPLPPYPVY 257
P+ P+ + G + P P L+ P PP L P+P +
Sbjct: 949 PSELEPLHGVPGPGLDPFPRHGGLALQPGPPGLHPFPFH 987
>AMYH_YEAST (P08640) Glucoamylase S1/S2 precursor (EC 3.2.1.3)
(Glucan 1,4-alpha-glucosidase) (1,4-alpha-D-glucan
glucohydrolase)
Length = 1367
Score = 64.7 bits (156), Expect = 6e-10
Identities = 65/275 (23%), Positives = 100/275 (35%), Gaps = 18/275 (6%)
Query: 4 TQNNHSPTSVPSPAPPSAETNNPNFIRKNLPSPWAQVVRGGSGWDTESQSQSPTGIHQSL 63
T + +S P P P S+ T + + +P+P + S S T S
Sbjct: 570 TSSTTESSSAPVPTPSSSTTESSS---APVPTPSSSTTESSSA--PAPTPSSSTTESSSA 624
Query: 64 PSSSSSSSSSLTTVDQPPPSDDSPKAAVVSSSPKAVVVSSPLPAPMEKNSNTIASDGG-D 122
P +SS++ SS V P S +A V + + SS P P +S T +S
Sbjct: 625 PVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVT 684
Query: 123 GGNAGGSKKPAWNKQPLNGVAVEIGPVMGAESWPALSESAKIPGKLPPESSSSKIAPPAA 182
S P + + A PV S S SA +P + SS P
Sbjct: 685 SSTTESSSAPVTSSTTESSSA----PVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTP 740
Query: 183 VDGSPSTSQGPIISHSPQRQGSTSNTKSSSMANNNLPNRPRPMRRISGSNIGPCPAQSSL 242
+ +S P+ S + + + T SSS ++ P P + S+ P P SS
Sbjct: 741 SSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSS 800
Query: 243 SNPPTPPPLPPYPVYQLPPAVSYPNMLPSIPDSSP 277
+ + P +P S N+ S P S+P
Sbjct: 801 TTESSVAP--------VPTPSSSSNITSSAPSSTP 827
Score = 58.9 bits (141), Expect = 3e-08
Identities = 85/417 (20%), Positives = 145/417 (34%), Gaps = 43/417 (10%)
Query: 3 TTQNNHSPTSVPSPAPPSAETNNPNFIRKN-------LPSPWAQVVRGGSGWDTESQSQS 55
TT+++ +P VP+P+ + E+++ +P+P + S T S ++S
Sbjct: 450 TTESSSAP--VPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTES 507
Query: 56 PTGIHQSLPSSSSSSSSSLTTVDQPPPSDDSPKAAVVSSSPKAVVVSSPLPAP----MEK 111
+ PSSS++ SSS + +S A V SS+ ++ S+P+P P E
Sbjct: 508 -SSAPVPTPSSSTTESSSAPAPTPSSSTTESSSAPVTSSTTES--SSAPVPTPSSSTTES 564
Query: 112 NSNTIASDGGDGGNAGGSKKPAWNKQPLNGVAVEIGPVMGAESWPALSESAKIPGKLPPE 171
+S + S + +A PV S S SA +P
Sbjct: 565 SSTPVTSSTTESSSA---------------------PVPTPSSSTTESSSAPVPTPSSST 603
Query: 172 SSSSKIAPPAAVDGSPSTSQGPIISHSPQRQGSTSNTKSSSMANNNLPNRPRPMRRISGS 231
+ SS P + +S P+ S + + + T SSS ++ P P + S
Sbjct: 604 TESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTES 663
Query: 232 NIGPCPAQSSLSNPPTPPPLPPYPV-YQLPPAVSYPNMLPSIPDSSPRDHHRNNNWDARP 290
+ P P SS + + P+ P S S P +P ++ P
Sbjct: 664 SSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVP 723
Query: 291 FVGGSSRRGHFGSHPRGDGSYHQNSYSSRREHDRGNYANTRDAHAPQPRMPPRGILRPPP 350
S+ P S ++S + + + A P P P
Sbjct: 724 TPSSSTTESSSAPVPTPSSSTTESSSAP----VTSSTTESSSAPVPTPSSSTTESSSAPV 779
Query: 351 PSTAAFLGPQTIGPFPAPVAYPDFYYFPTVPLDPFRGMPVFPHMPSPATFFPAAESS 407
P+ ++ + P P P + VP P + PS F + ESS
Sbjct: 780 PTPSSSTTESSSAPVPTPSSSTTESSVAPVP-TPSSSSNITSSAPSSTPFSSSTESS 835
Score = 56.6 bits (135), Expect = 2e-07
Identities = 83/381 (21%), Positives = 130/381 (33%), Gaps = 42/381 (11%)
Query: 3 TTQNNHSPTSVPSPAPPSAETNNPNFIRKNLPSPWAQVVRGGSGWDTESQS---QSPTGI 59
TT+++ +P VP+P+ + E+++ S A V TES S S T
Sbjct: 387 TTESSSAP--VPTPSSSTTESSSAPVTSSTTESSSAPVTSS----TTESSSAPVTSSTTE 440
Query: 60 HQSLPSSSSSSSSSLTTVDQPPPSDDSPKAAVVSSSPKAVVVSSPLPAPMEKNSNTIASD 119
S P +SS++ SS V P S +A V+SS SS P P +S T +S
Sbjct: 441 SSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSS---TTESSSAPVPTPSSSTTESSS 497
Query: 120 GGDGGNAGGSKKPAWNKQPLNGVAVEIGPVMGAESWPALSESAKIPGKLPPESSSSKIAP 179
P+ E + +ES+ P P S++ +
Sbjct: 498 A-----------------PVTSSTTESSSAPVPTPSSSTTESSSAPAPTPSSSTTESSSA 540
Query: 180 PAAVDGSPSTSQGPIISHSPQRQGSTSNTKSSSMANNNLPNRPRPMRRISGSNIGPCPAQ 239
P + +S P+ + S S+S +SS ++ P P + S+ P P
Sbjct: 541 P-VTSSTTESSSAPVPTPSSSTTESSSTPVTSSTTESSSAPVPTPSSSTTESSSAPVPTP 599
Query: 240 SS----LSNPPTPPPLPPYPVYQLPPAVSYPNMLPSIPDSSPRDHHRNNNWDARPFVGGS 295
SS S+ P P P P S S P +P ++ P S
Sbjct: 600 SSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSS 659
Query: 296 SRRGHFGSHPRGDGSYHQNS----YSSRREHD----RGNYANTRDAHAPQPRMPPRGILR 347
+ P S ++S SS E + + A P P
Sbjct: 660 TTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSS 719
Query: 348 PPPPSTAAFLGPQTIGPFPAP 368
P P+ ++ + P P P
Sbjct: 720 APVPTPSSSTTESSSAPVPTP 740
Score = 54.3 bits (129), Expect = 8e-07
Identities = 64/279 (22%), Positives = 107/279 (37%), Gaps = 16/279 (5%)
Query: 3 TTQNNHSPTSVPSPAPPSAETNNPNFIRKNLPSPWAQVVRGGSGWDTESQSQSPTGIHQS 62
T++ T+ P P P S+ T + + +P+P + S T S ++S + +
Sbjct: 302 TSKTCTKKTTTPVPTPSSSTTESSS---APVPTPSSSTTESSSAPVTSSTTESSSAPVPT 358
Query: 63 LPSSSSSSSSSLTTVDQPPPSDDSPKAAVVSSSPKAVVVSSPLPAPMEKNSNTIASDGG- 121
PSSS++ SSS S +P V SS+ + SS P P +S T +S
Sbjct: 359 -PSSSTTESSSAPVTSSTTESSSAP---VTSSTTE----SSSAPVPTPSSSTTESSSAPV 410
Query: 122 DGGNAGGSKKPAWNKQPLNGVAVEIGPVMGAESWPALS---ESAKIPGKLPPESSSSKIA 178
S P + + A + S P S ES+ P P S++ +
Sbjct: 411 TSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSS 470
Query: 179 PPAAVDGSPSTSQGPIISHSPQRQGSTSNTKSSSMANNNLPNRPRPMRRISGSNIGPCPA 238
P + S+S P+ + S S+S +SS ++ P P + S+ P P
Sbjct: 471 APVTSSTTESSS-APVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPAPT 529
Query: 239 QSSLSNPPTPPPLPPYPVYQLPPAVSYPNMLPSIPDSSP 277
SS + + P+ V P+ + S+P
Sbjct: 530 PSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSTP 568
Score = 52.0 bits (123), Expect = 4e-06
Identities = 70/284 (24%), Positives = 106/284 (36%), Gaps = 29/284 (10%)
Query: 11 TSVPSPAPPSAETNNPNFIRKNLPSPWAQVVRGGSGWDTESQSQSPTGIHQSLPSSSSSS 70
+S P P P S+ T + + +P+P + S T S ++S S P +SS++
Sbjct: 649 SSAPVPTPSSSTTESSS---APVPTPSSSTTESSSAPVTSSTTES-----SSAPVTSSTT 700
Query: 71 SSSLTTVDQPPPSDDSPKAAVVSSSPKAVVVSSPLPAPMEKNSNTIASDGGDGGNAGGSK 130
SS V P S +A V + + SS P P +S T +S + S
Sbjct: 701 ESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESS 760
Query: 131 KPAWNKQPLNGVAVEIGPVMGAESWPALSESAKIP-----------GKLPPESSSSKI-- 177
+ PV S S SA +P +P SSSS I
Sbjct: 761 SAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSVAPVPTPSSSSNITS 820
Query: 178 APPAAVDGSPST--SQGPIISHSPQRQGSTSNTKSSSMANNNLPNRPRP--MRRISGSNI 233
+ P++ S ST S P+ + S S+S SSS +++ P P I+ S
Sbjct: 821 SAPSSTPFSSSTESSSVPVPTPSSSTTESSSAPVSSSTTESSVAPVPTPSSSSNITSSAP 880
Query: 234 GPCPAQSSLSNPPTPPPLPP----YPVYQLPPAVSYPNMLPSIP 273
P S+ + T + P YP Q +VS +P
Sbjct: 881 SSIPFSSTTESFSTGTTVTPSSSKYPGSQTETSVSSTTETTIVP 924
Score = 38.9 bits (89), Expect = 0.035
Identities = 58/238 (24%), Positives = 89/238 (37%), Gaps = 34/238 (14%)
Query: 4 TQNNHSPTSVPSPAPPSAETNNPNFIRKNLPSPWAQVVRGGSGWDTESQSQS-PTGIHQS 62
T + +S P P P S+ T + + +P+P S TES S PT +
Sbjct: 696 TSSTTESSSAPVPTPSSSTTESSS---APVPTP--------SSSTTESSSAPVPTPSSST 744
Query: 63 LPSSSSSSSSSLTTVDQPPPSDDSPKAAVVSSSP-----KAVVVSSPLPAPMEKNSNT-- 115
SSS+ +SS T P S SS+P + SS P P +S T
Sbjct: 745 TESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTES 804
Query: 116 ------IASDGGDGGNAGGSKKPAWNKQPLNGVAVEIGPVMGAESWPA-----LSESAKI 164
S + ++ S P + + V V ES A +ES+
Sbjct: 805 SVAPVPTPSSSSNITSSAPSSTPFSSSTESSSVPVPTPSSSTTESSSAPVSSSTTESSVA 864
Query: 165 PGKLPPESSSSKIAPPAAVDGSPST---SQGPIISHSPQR-QGSTSNTKSSSMANNNL 218
P P SS+ + P+++ S +T S G ++ S + GS + T SS +
Sbjct: 865 PVPTPSSSSNITSSAPSSIPFSSTTESFSTGTTVTPSSSKYPGSQTETSVSSTTETTI 922
Score = 33.9 bits (76), Expect = 1.1
Identities = 34/140 (24%), Positives = 53/140 (37%), Gaps = 14/140 (10%)
Query: 3 TTQNNHSPTSVPS---------PAP-PSAETNNPNFIRKNLPSPWAQVVRGGSGWDTESQ 52
TT+++ +P PS P P PS+ T + PS + + S
Sbjct: 771 TTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSVAPVPTPSSSSNITSSAPSSTPFSS 830
Query: 53 SQSPTGIHQSLPSSSSSSSSSLTTVDQPPPSDDSPKAAVVSSSPKAVVVSSPLPAPMEKN 112
S + + PSSS++ SSS S +P SSS ++S P+ + +
Sbjct: 831 STESSSVPVPTPSSSTTESSSAPVSSSTTESSVAPVPTPSSSSN----ITSSAPSSIPFS 886
Query: 113 SNTIASDGGDGGNAGGSKKP 132
S T + G SK P
Sbjct: 887 STTESFSTGTTVTPSSSKYP 906
Score = 32.7 bits (73), Expect = 2.5
Identities = 52/251 (20%), Positives = 87/251 (33%), Gaps = 20/251 (7%)
Query: 45 SGWDTESQSQSPTGIHQSLPSSSSSSSSSL------TTVD------QPPPSDDSPKAAVV 92
S T S S+S T + P++ +++S + TT PP D +P
Sbjct: 240 SSTTTSSTSESSTSSSTTAPATPTTTSCTKEKPTPPTTTSCTKEKPTPPHHDTTPCTKKK 299
Query: 93 SSSPKAVVVSSPLPAPMEKNSNTIASDGGDGGNAGGSKKPAWNKQPLNGVAVEIGPVMGA 152
+++ K + P P +S T +S + + + + + PV
Sbjct: 300 TTTSKTCTKKTTTPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTP 359
Query: 153 ESWPALSESAKIPGKLPPESSSSKIAPPAAVDGS---PSTSQGPIISHSPQRQGSTSNTK 209
S S SA + ESSS+ + S P+ S S S ST+ +
Sbjct: 360 SSSTTESSSAPVTSS-TTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESS 418
Query: 210 SSSMANNNLPNRPRPMRRISGSNIGPCPAQSSL---SNPPTPPPLPPYPVYQLPPAVSYP 266
S+ + ++ + P+ S + P SS S+ P P P P S
Sbjct: 419 SAPVTSSTTESSSAPVTS-STTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSST 477
Query: 267 NMLPSIPDSSP 277
S P +P
Sbjct: 478 TESSSAPVPTP 488
>YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I
Length = 1794
Score = 63.2 bits (152), Expect = 2e-09
Identities = 71/289 (24%), Positives = 119/289 (40%), Gaps = 65/289 (22%)
Query: 14 PSPAPPSAETNNPNFIRKNLPSPWAQVVRGGSGWDTESQSQSPTGIHQSLPSSSSSSSSS 73
PSPAP ++ T+ P + +P AQ ++ G Q+ + + ++ +S S+ +
Sbjct: 1258 PSPAPVNSATSTP------VAAPTAQQIQPGK------QASAVSSNVPAVSASISTPPAV 1305
Query: 74 LTTVDQPPPSDDSPKAAVVSSSPKAVVVSS-PLP--APMEKNSNTIASDGGDGGNAGGSK 130
+ TV P P+ P AAV S + ++ P+P AP+E + ++ +
Sbjct: 1306 VPTVQHPQPTKQIPTAAVKDPSTTSTSFNTAPIPQQAPLENQFSKMSLEP---------- 1355
Query: 131 KPAWNKQPLNGVAVEIGPVMGAESWPALSESAKIPGKLPPESSSSKIAPPAAVDGSPST- 189
+ P + P + +S+ + PP + + AV+ PS
Sbjct: 1356 --------------PVRPAVPTSPKPQIPDSSNVHAPPPPVQPMNAMPSHNAVNARPSAP 1401
Query: 190 ---------SQGPIISHSPQRQGSTSNTKSSSMANNNLPNR-------PRPMRRISGSNI 233
S G +S S + + ST K+S N P+ P PM ++ +
Sbjct: 1402 ERRDSFGSVSSGSNVS-SIEDETSTMPLKASQPTNPGAPSNHAPQVVPPAPMHAVAP--V 1458
Query: 234 GPCPAQSSLSNPPTPP--PLPPYPVYQLPPA---VSYPNMLPSIPDSSP 277
P A ++N P P P PP PV QLPPA V P+M+PS+ P
Sbjct: 1459 QP-KAPGMVTNAPAPSSAPAPPAPVSQLPPAVPNVPVPSMIPSVAQQPP 1506
Score = 47.8 bits (112), Expect = 7e-05
Identities = 73/296 (24%), Positives = 111/296 (36%), Gaps = 39/296 (13%)
Query: 8 HSPTSVPSPAPPSAETNNPNFIRKNLPSPWAQVVRGGSGWDTESQSQSPTGIHQSLPSSS 67
++P +PAPP+ + P + N+P P Q P+ + + SS
Sbjct: 1468 NAPAPSSAPAPPAPVSQLPPAV-PNVPVP---------SMIPSVAQQPPSSVAPATAPSS 1517
Query: 68 S--SSSSSLTTVDQP-PPSDDSPKAAVVSSSPKAVVV---SSPLPAPMEKNSNTIASDG- 120
+ S SS V P PP+ P AA +SS+P + SSP AP E A +
Sbjct: 1518 TLPPSQSSFAHVPSPAPPAPQHPSAAALSSAPADNSMPHRSSPY-APQEPVQKPQAINNI 1576
Query: 121 GDGGNAGGSKKPAWNKQPLNGVAVEIGPVMGAESWPALSESAKIPGKLPPESSSSKIAPP 180
N G S+ + P+N + M A P+L+ A + +K+ PP
Sbjct: 1577 APATNLGTSQSFSPRMGPVNNSGSPLA--MNAAGQPSLAVPAVPSAPSNHFNPFAKMQPP 1634
Query: 181 AAVDGSPSTSQGPIISH--SPQRQGSTSNTKSSSMAN----------------NNLPNRP 222
A PS S + + S + +SS A + P RP
Sbjct: 1635 APSPLQPSGHDSDNWSQHGDEEEEDSEDDIRSSKDAAALAAKLFGGMAPAHPVSTPPVRP 1694
Query: 223 RPMRRISGSNIGPCPAQSSLSNPPTPPPLPPYPVYQLPPAVSYPNMLPSIPDSSPR 278
+ S P P S+ PP+ PP+P P PP + + PS+P+ R
Sbjct: 1695 QSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP-ASSAPSVPNPGDR 1749
Score = 41.2 bits (95), Expect = 0.007
Identities = 85/414 (20%), Positives = 134/414 (31%), Gaps = 59/414 (14%)
Query: 4 TQNNHSPTSVPSPAPPSAETNNPNFIRKNLPSPWAQ----VVRGGSGWDTESQSQSPTGI 59
+ N H+P P P P + N + +P + V GS + S +
Sbjct: 1372 SSNVHAP---PPPVQPMNAMPSHNAVNARPSAPERRDSFGSVSSGSNVSSIEDETSTMPL 1428
Query: 60 HQSLPSSSSSSSSSLTTVDQPPP----SDDSPKA-AVVSSSPKAVVVSSPLPAPMEKNSN 114
S P++ + S+ V P P + PKA +V+++P +P PAP+ +
Sbjct: 1429 KASQPTNPGAPSNHAPQVVPPAPMHAVAPVQPKAPGMVTNAPAPSSAPAP-PAPVSQLPP 1487
Query: 115 TIASDGGDGGNAGGSKKPAWNKQPLNGVAVEIGPVMGAESWPALSESAKIPGKLPP--ES 172
+ + S P+ +QP + VA P + P+ S A +P PP +
Sbjct: 1488 AVPNVPVP------SMIPSVAQQPPSSVAPATAP--SSTLPPSQSSFAHVPSPAPPAPQH 1539
Query: 173 SSSKIAPPAAVDGSPSTSQGPIISHSPQRQGSTSNTKSSSMANNNLPNRPRPMRRISGSN 232
S+ A D S P P ++ N + + NL R+ N
Sbjct: 1540 PSAAALSSAPADNSMPHRSSPYAPQEPVQKPQAINNIAPA---TNLGTSQSFSPRMGPVN 1596
Query: 233 IGPCPAQSSLSNPPT--PPPLPPYPVYQLPPAVSYPNMLPSIPDSSPRDHHRNNNWDARP 290
P + + P+ P +P P P + M P P H ++NW
Sbjct: 1597 NSGSPLAMNAAGQPSLAVPAVPSAPSNHFNP---FAKMQPPAPSPLQPSGHDSDNWSQH- 1652
Query: 291 FVGGSSRRGHFGSHPRGDGSYHQNSYSSRREHDRGNYANTRDAHA-------PQPRMPPR 343
G D S + AH PQ PP+
Sbjct: 1653 -----------GDEEEEDSEDDIRSSKDAAALAAKLFGGMAPAHPVSTPPVRPQSAAPPQ 1701
Query: 344 GILRPPPPSTAAFLGPQTIGPFPAPVAYPDFYYFPTVPLDPFRGMPVFPHMPSP 397
PPP + P + P PA P+ P P P +P+P
Sbjct: 1702 MSAPTPPPPPMSVPPPPSAPPMPAGP--------PSAPPPPLPASSA-PSVPNP 1746
>LA_AEDAL (Q26457) La protein homolog (La ribonucleoprotein) (La
autoantigen homolog)
Length = 383
Score = 61.2 bits (147), Expect = 7e-09
Identities = 31/81 (38%), Positives = 54/81 (66%), Gaps = 5/81 (6%)
Query: 406 SSLSNVIVNQIDYYFSDINLANDEFLKSNMD-EEGWVPITLIANFPRVKNLTSNIQLILD 464
S L + Q++YYF D NLA D+FL+ + +EGWVP+ ++ F R+K+L+ + ++I+D
Sbjct: 41 SKLEASTIRQLEYYFGDANLARDKFLQEQISKDEGWVPVDVLLTFKRLKSLSEDKKVIVD 100
Query: 465 SMRNSN--VVDVQGD--KLRR 481
++ S+ +++V D KLRR
Sbjct: 101 AIEKSDEGLIEVSEDREKLRR 121
>LA_RAT (P38656) Lupus La protein homolog (La ribonucleoprotein) (La
autoantigen homolog)
Length = 415
Score = 60.5 bits (145), Expect = 1e-08
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 406 SSLSNVIVNQIDYYFSDINLANDEFLKSNMD-EEGWVPITLIANFPRVKNLTSNIQLILD 464
++L I +QI+YYF D NL D+FLK + +EGWVP+ + F R+ LT++ +I+
Sbjct: 11 AALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLETMIKFNRLNRLTTDFNVIVQ 70
Query: 465 SMRNS--NVVDVQGDKLRRR 482
++ S N+++V DK + R
Sbjct: 71 ALSKSKANLMEVSADKTKIR 90
>LA_DROME (P40796) La protein homolog (La ribonucleoprotein) (La
autoantigen homolog)
Length = 390
Score = 59.7 bits (143), Expect = 2e-08
Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 10/96 (10%)
Query: 402 PAAESSLSN------VIVNQIDYYFSDINLANDEFLKSNM--DEEGWVPITLIANFPRVK 453
PAAE + I+ Q++YYF D NL D+FL+ + +E+GWVP++++ F R+
Sbjct: 38 PAAEEAAGGFTKQERAIIRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLA 97
Query: 454 NLTSNIQLILDSMRNS--NVVDVQGDKLRRRNWIDR 487
+L++++ I+ ++ S +V++ DKL R +R
Sbjct: 98 SLSTDLSEIVAALNKSEEGLVEISEDKLSLRRHPER 133
>EXTN_TOBAC (P13983) Extensin precursor (Cell wall
hydroxyproline-rich glycoprotein)
Length = 620
Score = 59.3 bits (142), Expect = 2e-08
Identities = 88/343 (25%), Positives = 119/343 (34%), Gaps = 51/343 (14%)
Query: 79 QPPPSDD--SPKAAVVSSSPKAVVVSSPLPAPMEKNSNTIASDGGDGGNAGGSKKPAWNK 136
QPPPS SP +A ++ P V SP AP +++ S G + GG +
Sbjct: 41 QPPPSSIGLSPPSAPTTTPPSRGHVPSPRHAP-PRHAYPPPSHGHLPPSVGGPPPHRGHL 99
Query: 137 QPLNGVAVEIGPVMGAESWPALSESAKIPGKLPPESSSSKIAPPAAVDGSPSTSQGPIIS 196
P G PV+ + S P S A P P S PP+ G S G
Sbjct: 100 PPSRGFNPPPSPVI-SPSHPPPSYGAPPPSHGPGHLPSHGQRPPSPSHGHAPPSGG---- 154
Query: 197 HSPQRQGSTSNTKSSSMANNNLPNRPRPMRRISGSNIGPCPAQSSLSNPPTP-----PPL 251
H+P R + P+ RP S G P + PPTP P +
Sbjct: 155 HTPPR-------------GQHPPSHRRPS---PPSRHGHPPPPTYAQPPPTPIYSPSPQV 198
Query: 252 PPYPVYQLPPAVSYPNMLPSIPDSSPRDHHRNNNWDARPFVGGSSRRGHFGSHPRGDGSY 311
P P Y PP P + P R H +P + H + P S
Sbjct: 199 QPPPTYSPPP----PTHVQPTPSPPSRGHQ------PQPPTHRHAPPTHRHAPPTHQPSP 248
Query: 312 HQN-SYSSRREHDRGNYANTRDAHAPQPR-----MPPRGILRPPPPSTAAFLGPQTIGPF 365
++ S RR+ Y+ A+A P+ PP PPPPS P P
Sbjct: 249 LRHLPPSPRRQPQPPTYSPPPPAYAQSPQPSPTYSPPPPTYSPPPPSPIYSPPPPAYSPS 308
Query: 366 PAPVAYPDFYYFPTVPLDPFRGMPVFPHMPSPATFFPAAESSL 408
P P P F + P + P + P P T+ P S +
Sbjct: 309 PPPTPTPTF----SPPPPAYSPPPTY--SPPPPTYLPLPSSPI 345
Score = 52.0 bits (123), Expect = 4e-06
Identities = 103/412 (25%), Positives = 133/412 (32%), Gaps = 70/412 (16%)
Query: 17 APPSAETNNPNFIRKNLPSPWAQVVRGGSGWDTESQSQSPTGIHQSLPSSSSSSSSSLTT 76
APP T+ P+ +R PSP Q Q PT + P + + S T
Sbjct: 240 APP---THQPSPLRHLPPSP-------------RRQPQPPT--YSPPPPAYAQSPQPSPT 281
Query: 77 VDQPPPSDDSPKAAVVSSSPKAVVVSSPLPAPMEKNSNTIASDGGDGGNAGGSKKPAWNK 136
PPP+ P + + S P SP P P S + S P ++
Sbjct: 282 YSPPPPTYSPPPPSPIYSPPPPAYSPSPPPTPTPTFSPPPPAY---------SPPPTYSP 332
Query: 137 QPLNGVAVEIGPVMGA-----ESWPALSESAKIPGKLPPESSSSKIAPPAAVDGSPST-- 189
P + + P+ P S S P LPP SS PP + P T
Sbjct: 333 PPPTYLPLPSSPIYSPPPPVYSPPPPPSYSPPPPTYLPPPPPSSP--PPPSFSPPPPTYE 390
Query: 190 -SQGPIISHSPQRQGSTSNTKSSSMANNNLPN--RPRPMRRISGSNIGPCPAQSSLSNPP 246
S P ++SP + + + P +P P+ P P S PP
Sbjct: 391 QSPPPPPAYSPPLPAPPTYSPPPPTYSPPPPTYAQPPPLP----PTYSPPPPAYSPPPPP 446
Query: 247 T---PPPL--PPYPVYQLPP----AVSYPNMLPSIPDSSPRDHHRNNNWDARP--FVGGS 295
T PPP PP P Y PP S P S P SP P F
Sbjct: 447 TYSPPPPTYSPPPPAYAQPPPPPPTYSPPPPAYSPPPPSPIYSPPPPQVQPLPPTFSPPP 506
Query: 296 SRRGHFGSHPRGDGSYHQNSYSSRREHDRGNYANTRDAHAP-----QPRMPPRGILRPPP 350
RR H P +Y + R H+P QPR P +PP
Sbjct: 507 PRRIHLPPPPHRQPRPPTPTYGQPPSPPTFSPPPPRQIHSPPPPHWQPRTPTPTYGQPPS 566
Query: 351 PSTAAFLGPQTIGPFPAPVAYPDFYYFPTVPLDPFRGMPVFPHMPSPATFFP 402
P T + P+ I P P P P P G P P P T+ P
Sbjct: 567 PPTFSAPPPRQIHSPPPPHRQPR-------PPTPTYGQPPSP----PTTYSP 607
Score = 41.2 bits (95), Expect = 0.007
Identities = 96/418 (22%), Positives = 124/418 (28%), Gaps = 73/418 (17%)
Query: 9 SPTSVPSPAPPSAETNNPNFIRKNLPSPWAQVVRGG------SGWDTESQSQSPTGIHQS 62
SP PS PPS P+ +LPS + SG T + Q P +
Sbjct: 110 SPVISPSHPPPSYGAPPPSHGPGHLPSHGQRPPSPSHGHAPPSGGHTPPRGQHPPSHRRP 169
Query: 63 LPSSSSSSSSSLTTVDQPPPSDDSPKAAVV---SSSPKAVVVSSPLPAPMEKNSNTIASD 119
P S T PP SP V + SP P P+P +
Sbjct: 170 SPPSRHGHPPPPTYAQPPPTPIYSPSPQVQPPPTYSPPPPTHVQPTPSPPSRGHQPQPPT 229
Query: 120 GGDGGNAGGSKKPAWNKQPLNGVAV----EIGPVMGAESWPALSESAKIPGKLPPESSSS 175
P PL + + P + PA ++S + P +
Sbjct: 230 HRHAPPTHRHAPPTHQPSPLRHLPPSPRRQPQPPTYSPPPPAYAQSPQPSPTYSPPPPTY 289
Query: 176 KIAPPAAVDGSPSTSQGPIISHSPQRQGSTSNTKSSSMANNNLPNRPRPMRRISGSNIGP 235
PP+ + P P S SP P P P P
Sbjct: 290 SPPPPSPIYSPPP----PAYSPSP-------------------PPTPTPTFSPPPPAYSP 326
Query: 236 CPAQSSLSNPPTPPPLPPYPVYQLPPAV-------SY----PNMLPSIPDSSPRDHHRNN 284
P S PPT PLP P+Y PP V SY P LP P SSP
Sbjct: 327 PPTYSP--PPPTYLPLPSSPIYSPPPPVYSPPPPPSYSPPPPTYLPPPPPSSP------- 377
Query: 285 NWDARPFVGGSSRRGHFGSHPRGDGSYH-----QNSYSSRREHDRGNYANTRDAHAPQPR 339
P S + P +Y +YS Y+ +A P
Sbjct: 378 -----PPPSFSPPPPTYEQSPPPPPAYSPPLPAPPTYSP----PPPTYSPPPPTYAQPPP 428
Query: 340 MPPRGILRPPPPSTAAFLGPQTIGPFPAPVAYPDFYYFPTVPLDPFRGMPVFPHMPSP 397
+PP PPPP+ + P T P P + P Y P P P + P P
Sbjct: 429 LPP--TYSPPPPAYSP-PPPPTYSPPPPTYSPPPPAYAQPPPPPPTYSPPPPAYSPPP 483
>LA_HUMAN (P05455) Lupus La protein (Sjogren syndrome type B
antigen) (SS-B) (La ribonucleoprotein) (La autoantigen)
Length = 408
Score = 58.9 bits (141), Expect = 3e-08
Identities = 28/80 (35%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 406 SSLSNVIVNQIDYYFSDINLANDEFLKSNMD-EEGWVPITLIANFPRVKNLTSNIQLILD 464
++L I +QI+YYF D NL D+FLK + +EGWVP+ ++ F R+ LT++ +I++
Sbjct: 11 AALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVE 70
Query: 465 SMRNS--NVVDVQGDKLRRR 482
++ S ++++ DK + R
Sbjct: 71 ALSKSKAELMEISEDKTKIR 90
>LA_BOVIN (P10881) Lupus La protein homolog (La ribonucleoprotein)
(La autoantigen homolog)
Length = 404
Score = 58.9 bits (141), Expect = 3e-08
Identities = 28/80 (35%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 406 SSLSNVIVNQIDYYFSDINLANDEFLKSNMD-EEGWVPITLIANFPRVKNLTSNIQLILD 464
++L I +QI+YYF D NL D+FLK + +EGWVP+ ++ F R+ LT++ +I++
Sbjct: 11 AALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVE 70
Query: 465 SMRNS--NVVDVQGDKLRRR 482
++ S ++++ DK + R
Sbjct: 71 ALSKSEAELMEISEDKTKIR 90
>LA_MOUSE (P32067) Lupus La protein homolog (La ribonucleoprotein)
(La autoantigen homolog)
Length = 415
Score = 58.2 bits (139), Expect = 6e-08
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 406 SSLSNVIVNQIDYYFSDINLANDEFLKSNMD-EEGWVPITLIANFPRVKNLTSNIQLILD 464
++L I +QI+YYF D NL D+FLK + +EGWVP+ + F R+ LT++ +I+
Sbjct: 11 TALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLETMIKFNRLNRLTTDFNVIVQ 70
Query: 465 SMRNS--NVVDVQGDKLRRR 482
++ S +++V DK + R
Sbjct: 71 ALSKSKAKLMEVSADKTKIR 90
>ENAH_MOUSE (Q03173) Enabled protein homolog (NPC derived
proline-rich protein 1) (NDPP-1)
Length = 802
Score = 57.8 bits (138), Expect = 7e-08
Identities = 98/388 (25%), Positives = 136/388 (34%), Gaps = 69/388 (17%)
Query: 39 QVVRGGSGWDTESQ-SQSPTGIHQSLPSSSSSSSSSLTTVDQPPPS----------DDSP 87
Q+ R W+ E + S + SL S+ SS PPPS D +P
Sbjct: 240 QLEREQVEWERERRMSNAAPSSDSSLSSAPLPEYSSCQPPSAPPPSYAKVISAPVSDATP 299
Query: 88 KAAVVSSSPKAVVVSSPLPAPMEKNSNTIASDGGDGGNAGGSKKPAWNKQPLNGVAVEIG 147
AVV++ P S+P P+ + A+ G + A +PLN +
Sbjct: 300 DYAVVTALPPT---STPPTPPLRHAATRFATSLGSAFHPV-LPHYATVPRPLNKNSRPSS 355
Query: 148 PVMGAESWPALSESAKIP----GKLPPESSSSKIAPPAAVDGSPSTSQGP-----IISHS 198
PV S P ++S P LPP +PP + P + GP + S
Sbjct: 356 PVNTPSSQPPAAKSCAWPTSNFSPLPP-------SPPIMISSPPGKATGPRPVLPVCVSS 408
Query: 199 PQRQGSTSNTKSSSMANNNLPNRPRPMRRISGSNIGPCPAQSSLSNPPTPPPLPPYPVYQ 258
P Q S T N +L + P + P P + PP PPP PP P
Sbjct: 409 PVPQMPPSPTAP----NGSLDSVTYP--------VSPPPTSGPAAPPPPPPPPPPPPPPP 456
Query: 259 LPP-------AVSYPNMLPSIPDSSPRDHHRNNNWDARPF-VGGSSRRGHFGSHPR-GDG 309
LPP ++S+ S P +P ++ P G+ +P GD
Sbjct: 457 LPPPPLPPLASLSHCGSQASPPPGTPLASTPSSKPSVLPSPSAGAPASAETPLNPELGDS 516
Query: 310 SYHQNSYSSRREHDRGNYANTRDAHAPQPRMPPRGILRPPPPSTAAFLGPQTIGPFPAPV 369
S + G A ++ A +P P+ G PPPP GP P P
Sbjct: 517 S----------ASEPGLQAASQPAESPTPQGLVLGPPAPPPPPPLP-SGPAYASALPPPP 565
Query: 370 AYPDFYYFPTVPLDPFRGMPVFPHMPSP 397
P P PL P G P P P P
Sbjct: 566 GPP-----PPPPL-PSTGPPPPPPPPPP 587
Score = 53.9 bits (128), Expect = 1e-06
Identities = 84/332 (25%), Positives = 119/332 (35%), Gaps = 34/332 (10%)
Query: 9 SPTSVPSPAPPSAETNN-PNFIRKNLPSPWAQVVRGGSGWDTESQSQSPTGIHQ---SLP 64
SP + PS PP+A++ P LP ++ G T + P + +P
Sbjct: 355 SPVNTPSSQPPAAKSCAWPTSNFSPLPPSPPIMISSPPGKATGPRPVLPVCVSSPVPQMP 414
Query: 65 SSSSSSSSSLTTVDQP--PPSDDSPKAAVVSSSPKAVVVSSPLPAPMEKNSNTIASDGGD 122
S ++ + SL +V P PP P A P PLP P +++ G
Sbjct: 415 PSPTAPNGSLDSVTYPVSPPPTSGPAAPPPPPPPPPPPPPPPLPPPPLPPLASLSHCGSQ 474
Query: 123 GGNAGGSKKPAWNKQPLNGVAVEIGPVMGAESWPALSESAKIPGKLPPESSSSKIAPPAA 182
G+ + P + +V P GA PA +E+ P +L S+S A+
Sbjct: 475 ASPPPGTPLAS---TPSSKPSVLPSPSAGA---PASAETPLNP-ELGDSSASEPGLQAAS 527
Query: 183 VDGSPSTSQGPIISHSPQRQGSTSNTKSSSMANNNLPNRPRPMRRISGSNIGPCPAQSSL 242
T QG ++ P S + LP P P P P S
Sbjct: 528 QPAESPTPQGLVL--GPPAPPPPPPLPSGPAYASALPPPPGP---------PPPPPLPST 576
Query: 243 SNPPTPPPLPPYPVYQLPPAVSYPNMLPSIPDS-----SPRDHHRNNNWDARPFVGGSSR 297
PP PPP PP P PP P P +P S S + +R A G R
Sbjct: 577 GPPPPPPPPPPLPNQAPPPPP--PPPAPPLPASGIFSGSTSEDNRPLTGLAAAIAGAKLR 634
Query: 298 ---RGHFGSHPRGDGSYHQNSYSSRREHDRGN 326
R GS P G + + SS+ + RGN
Sbjct: 635 KVSRVEDGSFPGGGNTGSVSLASSKADAGRGN 666
>PCLO_RAT (Q9JKS6) Piccolo protein (Multidomain presynaptic
cytomatrix protein)
Length = 5085
Score = 55.8 bits (133), Expect = 3e-07
Identities = 67/284 (23%), Positives = 104/284 (36%), Gaps = 26/284 (9%)
Query: 9 SPTSVPSPAPPSAETNNPNFIRKNLPSPWAQVVRGGSGWDTESQSQSP--TGIHQSLPSS 66
SP +P E + K++ S A+ V+ + + QSP T Q+ P
Sbjct: 211 SPKPIPKQQGQVKEVIQQDSSPKSVSSQQAEKVKPQAPGTGKPSQQSPAQTPAQQASPGK 270
Query: 67 --SSSSSSSLTTVDQPPPSDDSPKAAVVSSSPKAVVVSSP-LPAPMEKNSNTIASDGGDG 123
+ S+ TV QP P+ + A SP +P A +EK S++
Sbjct: 271 PVAQQPGSAKATVQQPGPAKSPAQPAGTGKSPAQPPAKTPGQQAGLEKTSSS-----QQP 325
Query: 124 GNAGGSKKPAWNKQPLNGV---AVEIGPVMGAESWPALSESAKIPG--KLPPESSSSKIA 178
G ++ P K PL V A + G P +AK+PG K P + S
Sbjct: 326 GPKSLAQTPGHGKFPLGPVKSPAQQPGTAKHPAQQPGPQTAAKVPGPTKTPAQQSGPGKT 385
Query: 179 PPAAVDGSPSTSQGPIISHSPQRQGSTSNTKSSSMANNNLPNRPRPMRRISGSNIGPCPA 238
P + + Q PI + +Q + T+ A P +P+P + P
Sbjct: 386 PAQQPGPTKPSPQQPIPAKPQPQQPVATKTQPQQSA----PAKPQPQQP------APAKP 435
Query: 239 QSSLSNPPTPPPLPPYPVYQLPPAVSYPNMLPSIPDSSPRDHHR 282
Q P P P PP P P + P P ++ + HH+
Sbjct: 436 QPQQPTPAKPQPQPPTPAKPQPQPPTATKPQPQ-PPTATKPHHQ 478
Score = 36.6 bits (83), Expect = 0.17
Identities = 69/305 (22%), Positives = 106/305 (34%), Gaps = 51/305 (16%)
Query: 20 SAETNNPNFIRKNLPSPWAQVVRGGSGWDTES----QSQSPTGIHQSLPSSSSSS---SS 72
S+ T P+ + + S AQV + S T+S QS PTG ++ P S + +S
Sbjct: 721 SSSTTKPDILSSQVQSQ-AQV-KTASPLKTDSAKPSQSFPPTG-EKTTPLDSKAMPRPAS 777
Query: 73 SLTTVDQPPPSDDS--------------PKAAVVSSSPKAVVVSSPLPAPMEKNSNTIAS 118
+ QP P +S PK A SPK P P+ K S T +
Sbjct: 778 DSKIISQPGPGSESKDPKHIDPIQKKDEPKKAQPKGSPK------PETKPVPKGSPTPSG 831
Query: 119 DGGDGGNAGG-SKKPAWNKQPLNGVAVEIGPVMGAESWPALSESAKIPGKL-----PPES 172
G A S++P ++ ++ +G + A + + GKL S
Sbjct: 832 TRPTAGQAAPPSQQPPKPQEQSRRFSLNLGGITDAPKSQPTTPQETVTGKLFGFGASIFS 891
Query: 173 SSSKIAPPAAVDGS-PSTS------QGPIISHSPQRQGSTSNTKSSSMANNNLPNRPRPM 225
+S + A G P T Q P S SP QG +T A +
Sbjct: 892 QASNLISTAGQQGPHPQTGPAAPSKQAPTPSQSPAAQGPAKSTGQLPPAPAKATAVKKEA 951
Query: 226 RRISGSNIGPCPAQSSLSNPPTPPPLPPYPVYQLPPAVSYPNMLPSIPDSSPRDHHRNNN 285
+ + N+ P Q+ + PP PP PS P+ + H +
Sbjct: 952 KAAAAENLESKPEQAPTAKKTEKDKKPPPAKVGKPP--------PSEPEKAVPAHKPDKT 1003
Query: 286 WDARP 290
+P
Sbjct: 1004 TKPKP 1008
Score = 35.8 bits (81), Expect = 0.29
Identities = 54/227 (23%), Positives = 85/227 (36%), Gaps = 20/227 (8%)
Query: 50 ESQSQSPTGIHQSLPSSSSSSSSSLTTVDQPPPSDDSPKAAVVSSSPKAVVVSSPLPAPM 109
+S+ S T S+ S SL P + + + S VV S P
Sbjct: 2169 DSEEISSTYFPGSIIDYPEDISVSLDRTIMPESRTNEDRIVLSFSGMAPSVVESVGTKPE 2228
Query: 110 EKNSNTIASDGGDGGNAGGSKKPA--WNKQPLNGVAVEIGPVMGAESWPALSESAKIPGK 167
++TI++D S+K K+ +G+ +E+ + + +E KI
Sbjct: 2229 RPQADTISTD------LPISEKDLIKGKKETGDGIILEVLDAYKDKREESEAELTKISLP 2282
Query: 168 LP--PESSSSKIAPPAAVDG-SPSTSQGPIISHSPQRQGSTSNTKSSSMANNNLPNRPRP 224
P ++ SS AP SP + G I ++ T S S+ + P++ RP
Sbjct: 2283 EPGLAQAPSSVTAPQIKEQHVSPHSVSGKISG----QEKPTYRLPSGSLPVSTHPSKSRP 2338
Query: 225 MRRISGSNIGPCPAQSSLSNPPTP-----PPLPPYPVYQLPPAVSYP 266
R S +I P PP+P PP PP P P +YP
Sbjct: 2339 FFRSSSLDISAQPPPPPPPPPPSPSTSSPPPTPPLPPATSPKPPTYP 2385
Score = 31.2 bits (69), Expect = 7.2
Identities = 54/227 (23%), Positives = 75/227 (32%), Gaps = 26/227 (11%)
Query: 67 SSSSSSSLTTVDQPPPSDDSPKAAVVSSSPKAVVVSSPLPAPMEKNSNTIASDGGDGGNA 126
SSS S PPP SP + +P +SP P K +A+
Sbjct: 2342 SSSLDISAQPPPPPPPPPPSPSTSSPPPTPPLPPATSPKPPTYPKKKLAVAA------TV 2395
Query: 127 GGSKKPAWNKQPLNGVAVEIGPVMGAESWPALSESAKIPGKLP---------------PE 171
+ + L VE + PA A P +P PE
Sbjct: 2396 TSTTIVTTHVDAL--TMVEAAAARRSNGLPATKMCAIAPPPVPPKPSQIPTGLVFTHRPE 2453
Query: 172 SSSSKIAPPAAVDGSPSTSQGPIISHSPQRQGSTSNTKSSSMANNNLPNRPRPMRRISGS 231
+ IAP AV P T+Q P + S ++T S ++ + N P P +S
Sbjct: 2454 AIKPPIAPKPAVPQIPVTTQKPTDTCPKPTGLSLTSTMSLNLVTSADYNVPSPTSPLSPH 2513
Query: 232 NIGPCPAQS-SLSNPPTPPPLPPYPVYQLPPAVSYPNMLPSIPDSSP 277
+ P S SL + LP P P S + S P SP
Sbjct: 2514 SNKSSPRYSKSLMDTYVVITLPSEP--GTPTDSSAAQAITSWPLGSP 2558
>LAH1_SCHPO (P87058) La protein homolog (La ribonucleoprotein) (La
autoantigen homolog)
Length = 298
Score = 55.8 bits (133), Expect = 3e-07
Identities = 29/74 (39%), Positives = 49/74 (66%), Gaps = 5/74 (6%)
Query: 412 IVNQIDYYFSDINLANDEFL-KSNMDEEGWVPITLIANFPRVKNLTSNIQLILDSMRNSN 470
++ Q+++YFSD NL +D+FL ++ +GWVPI IANF R++ ++ I++++R S
Sbjct: 67 VLKQVEFYFSDTNLPHDKFLWTTSQKNDGWVPIQTIANFKRMRRF-QPLEAIVNALRKSP 125
Query: 471 ---VVDVQGDKLRR 481
VD G+K+RR
Sbjct: 126 ELLEVDEAGEKVRR 139
>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor
(Hydroxyproline-rich glycoprotein 1)
Length = 555
Score = 55.1 bits (131), Expect = 5e-07
Identities = 70/270 (25%), Positives = 91/270 (32%), Gaps = 22/270 (8%)
Query: 9 SPTSVPSPAPPSAETNNPNFIRKNLPSPWAQVVRGGSGWDTESQSQSPTGIHQSLPSSSS 68
+P S PSPAPPS +P PSP S SP PS +
Sbjct: 74 APPSPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPPSPAPPSPSPPA 133
Query: 69 SSSSSLTTVDQPPPSDDSPKAAVVSSSPKAVVVSSPLPAPMEKNSNTIASDGGDGGNAGG 128
S S + P P +P + S P S P+P S T S +
Sbjct: 134 PPSPSPPSPAPPLPPSPAPPS---PSPPVPPSPSPPVPPSPAPPSPTPPSPSPPVPPSPA 190
Query: 129 SKKPAWNKQPLNGVAVEIGPVMGAESWPALSESAKIPGKLPPESSSSKIAPPAAVDGSPS 188
PA P PV + + P+ A P S S APP+ V SP+
Sbjct: 191 PPSPAPPVPPSPAPPSPAPPVPPSPAPPSPPSPAPPSPPSPAPPSPSPPAPPSPVPPSPA 250
Query: 189 TSQGPIISHSPQRQGSTSNTKSSSMANNNLPNRPRPMRRISGSNIGPCPAQSSL-SNPPT 247
S P + P PRP P PA + + +PP+
Sbjct: 251 PPSPAPPSPKPPAPPPPPSPPP--------PPPPRP----------PFPANTPMPPSPPS 292
Query: 248 PPPLPPYPVYQLPPAVSYPNMLPSIPDSSP 277
PPP P P PP+ S P+ +P P P
Sbjct: 293 PPPSPAPPTPPTPPSPSPPSPVPPSPAPVP 322
Score = 54.3 bits (129), Expect = 8e-07
Identities = 99/398 (24%), Positives = 120/398 (29%), Gaps = 88/398 (22%)
Query: 14 PSPAPPSAETNNPNFIRKNLPSPWAQVVRGGSGWDTESQSQSPTGIHQSLPSSSSSSSSS 73
PSPAPPS +P PSP SP + PS S + S
Sbjct: 41 PSPAPPSPAPPSPAPPSPAPPSP---------------APPSPGPPSPAPPSPPSPAPPS 85
Query: 74 LTTVDQPPPSDDSPKAAVVSSSPKAVVVSSPLPAPMEKNSNTIASDGGDGGNAGGSKKPA 133
PPS P A S +P + + P PAP S S + PA
Sbjct: 86 PAPPSPAPPSPAPPSPAPPSPAPPSP--APPSPAPPSPPSPAPPSPSPPAPPSPSPPSPA 143
Query: 134 WNKQPLNGVAVEIGPVMGAESWPALSESAKIPGKLPPESSSSKIAPPAAVDGSPSTSQGP 193
P PV + S P + S P PP S S PP+ SP+ P
Sbjct: 144 PPLPPSPAPPSPSPPVPPSPS-PPVPPSPAPPSPTPP--SPSPPVPPSPAPPSPA----P 196
Query: 194 IISHSPQRQGSTSNTKSSSMANNNLPNRPRPMRRISGSNIGPCPAQSSLSNPPTPPPLPP 253
+ SP S P+ P P S P P+ + +P P P PP
Sbjct: 197 PVPPSPAPPSPAPPVPPSPAP----PSPPSPAPPSPPSPAPPSPSPPAPPSPVPPSPAPP 252
Query: 254 YPV--YQLPPAVSYPNMLPSIPDSSPRDHHRNNNWDARPFVGGSSRRGHFGSHPRGDGSY 311
P PPA P P P P PF
Sbjct: 253 SPAPPSPKPPAPPPPPSPPPPPPPRP------------PFP------------------- 281
Query: 312 HQNSYSSRREHDRGNYANTRDAHAPQPRMPPRGILRPPPPSTAAFLGPQTIGPFPAPVAY 371
ANT P P PP P PP+ + P + P PAPV
Sbjct: 282 ----------------ANT--PMPPSPPSPPPSPAPPTPPTPPSPSPPSPVPPSPAPV-- 321
Query: 372 PDFYYFPTVPLDPFRGMPVFPHMPSPATFFPAAESSLS 409
P P P P P P+P T P+ S S
Sbjct: 322 ------PPSPAPP-SPAPSPPPSPAPPTPSPSPSPSPS 352
Score = 51.2 bits (121), Expect = 7e-06
Identities = 71/273 (26%), Positives = 84/273 (30%), Gaps = 46/273 (16%)
Query: 9 SPTSVPSPAPPSAETNNPNFIRKNLPSPWAQVVRGGSGWDTESQSQSPTGIHQSLPSSSS 68
+P S PSPAPPS PSP A S SP LP S +
Sbjct: 117 APPSPPSPAPPS-------------PSPPA------------PPSPSPPSPAPPLPPSPA 151
Query: 69 SSSSSLTTVDQP----PPSDDSPKAAVVSSSPKAVVVSSPLPAPMEKNSNTIASDGGDGG 124
S S P PPS P S SP P PAP S
Sbjct: 152 PPSPSPPVPPSPSPPVPPSPAPPSPTPPSPSPPV----PPSPAPPSPAPPVPPSPAPPSP 207
Query: 125 NAGGSKKPAWNKQPLNGVAVEIGPVMGAESWPALSESAKIPGKLPPESSSSKIAPPAAVD 184
PA P P + S PA P +PP + APP+
Sbjct: 208 APPVPPSPAPPSPPSPAPPSPPSPAPPSPSPPA------PPSPVPPSPAPPSPAPPSPKP 261
Query: 185 GSPSTSQGPIISHSPQRQGSTSNTKSSSMANNNLPNRPRPMRRISGSNIGPCPAQSSLSN 244
+P P P R +NT + P+ P S P P
Sbjct: 262 PAPPPPPSP-PPPPPPRPPFPANTPMPPSPPSPPPSPAPPTPPTPPSPSPPSPV------ 314
Query: 245 PPTPPPLPPYPVYQLPPAVSYPNMLPSIPDSSP 277
PP+P P+PP P P P+ P P SP
Sbjct: 315 PPSPAPVPPSPAPPSPAPSPPPSPAPPTPSPSP 347
Score = 51.2 bits (121), Expect = 7e-06
Identities = 84/329 (25%), Positives = 104/329 (31%), Gaps = 60/329 (18%)
Query: 81 PPSDDSPKAAVVSSSPKAVVVSSPLPAPMEKNSNTIASDGGDGGNAGGSKKPAWNKQPLN 140
PPS P A S +P + SP P + G PA P
Sbjct: 40 PPSPAPPSPAPPSPAPPSPAPPSPAPP------------------SPGPPSPAPPSPP-- 79
Query: 141 GVAVEIGPVMGAESWPALSESAKIPGKLPPESSSSKIAPPAAVDGSPSTSQGPIISHSPQ 200
P A PA A P PP + APP+ SP + P S SP
Sbjct: 80 ----SPAPPSPAPPSPAPPSPAP-PSPAPPSPAPPSPAPPSPAPPSPPSPAPP--SPSPP 132
Query: 201 RQGSTSNTK-------SSSMANNNLPNRPRPMRRISGSNIGPCPAQSSLSNPPTPPPLPP 253
S S S + + + P P P + S P P S S P P P PP
Sbjct: 133 APPSPSPPSPAPPLPPSPAPPSPSPPVPPSPSPPVPPSPAPPSPTPPSPSPPVPPSPAPP 192
Query: 254 YPVYQLPPAVSYPNMLPSIPDSSPRDHHRNNNWDARPFVGGSSRRGHFGSHPRGDGSYHQ 313
P +PP+ + P+ P +P S A P + P S
Sbjct: 193 SPAPPVPPSPAPPSPAPPVPPS-----------PAPPSPPSPA--------PPSPPSPAP 233
Query: 314 NSYSSRREHDRGNYANTRDAHAPQPRMPPRGILRPPPPSTAAFLGPQTIGPFPAPVAYPD 373
S S + + AP PP PPPPS P PFPA P
Sbjct: 234 PSPSPPAPPSPVPPSPAPPSPAPPSPKPP---APPPPPSPPP--PPPPRPPFPANTPMPP 288
Query: 374 FYYFPTVPLDPFRGMPVFPHMPSPATFFP 402
P+ P P P P PSP + P
Sbjct: 289 SP--PSPPPSPAPPTPPTPPSPSPPSPVP 315
Score = 51.2 bits (121), Expect = 7e-06
Identities = 65/248 (26%), Positives = 80/248 (32%), Gaps = 44/248 (17%)
Query: 165 PGKLPPESSSSKIAPPAAVDGSPST-SQGPIISHSPQRQGSTSNTKSSSMANNNLPNRPR 223
P PP + APP+ SP+ S GP SP S S + P P
Sbjct: 41 PSPAPPSPAPPSPAPPSPAPPSPAPPSPGP---PSPAPPSPPSPAPPSPAPPSPAPPSPA 97
Query: 224 PMRRISGSNIGPCPAQSSLSNPPTPPPLPPYPVYQLPPAVSYPNMLPSIPDSSPRDHHRN 283
P S P PA S + P P P PP P PP+ S P+ P +P S
Sbjct: 98 PPSPAPPSPAPPSPAPPSPAPPSPPSPAPPSPSPPAPPSPSPPSPAPPLPPSPA------ 151
Query: 284 NNWDARPFVGGSSRRGHFGSHPRGDGSYHQNSYSSRREHDRGNYANTRDAHAPQPRMPPR 343
P S S + T + +P +PP
Sbjct: 152 ---------------------PPSPSPPVPPSPSPPVPPSPAPPSPTPPSPSPP--VPP- 187
Query: 344 GILRPPPPSTAAFLGPQTIGPFPAPVAYPDFYYFPTVPLDPFRGMPVFPHMPSPATFFPA 403
P PPS A + P P PAP P P P P P PSPA P+
Sbjct: 188 ---SPAPPSPAPPVPPSPAPPSPAPPV-------PPSPAPPSPPSPAPPSPPSPAPPSPS 237
Query: 404 AESSLSNV 411
+ S V
Sbjct: 238 PPAPPSPV 245
Score = 50.4 bits (119), Expect = 1e-05
Identities = 72/272 (26%), Positives = 87/272 (31%), Gaps = 27/272 (9%)
Query: 14 PSPAPPSAETNNPNFIRKNLPSPWAQVVRGGSGWDTESQSQSPTGIHQSLPSSSSSSSSS 73
PSPAPPS +P PSP A S SP LP S + S S
Sbjct: 109 PSPAPPSPAPPSPPSPAPPSPSPPAP------------PSPSPPSPAPPLPPSPAPPSPS 156
Query: 74 LTTVDQP----PPSDDSPKAAVVSSSPKAVVVSSPLPAPMEKNSNTIASDGGDGGNAGGS 129
P PPS P S SP P PAP S
Sbjct: 157 PPVPPSPSPPVPPSPAPPSPTPPSPSPPV----PPSPAPPSPAPPVPPSPAPPSPAPPVP 212
Query: 130 KKPAWNKQPLNGVAVEIGPVMGAESWPA----LSESAKIPGKLPPESSSSKIAPPAAVDG 185
PA P P + S PA + S P PP S PP
Sbjct: 213 PSPAPPSPPSPAPPSPPSPAPPSPSPPAPPSPVPPSPAPPSPAPP-SPKPPAPPPPPSPP 271
Query: 186 SPSTSQGPIISHSPQRQGSTSNTKSSSMANNNLPNRPRPMRRISGSNIGPCPAQSSLSNP 245
P + P +++P S S + P P P + S P+ + S
Sbjct: 272 PPPPPRPPFPANTPMPPSPPSPPPSPAPPTPPTPPSPSPPSPVPPSPAPVPPSPAPPSPA 331
Query: 246 PTPPPLPPYPVYQLPPAVSYPNMLPSIPDSSP 277
P+PPP P P P+ S P+ PS P SP
Sbjct: 332 PSPPPSPAPPTPSPSPSPS-PSPSPS-PSPSP 361
Score = 47.4 bits (111), Expect = 1e-04
Identities = 68/271 (25%), Positives = 86/271 (31%), Gaps = 23/271 (8%)
Query: 9 SPTSVPSPAPPSAETNNPNFIRKNLPSPWAQVVRGGSGWDTESQSQSPTGIHQSLPSSSS 68
SP + PSP+PPS P PSP S SP P S +
Sbjct: 130 SPPAPPSPSPPSPAPPLPPSPAPPSPSP------------PVPPSPSPPVPPSPAPPSPT 177
Query: 69 SSSSSLTTVDQPPPSDDSPKAAVVSSSPKAVVVSSPLPAPMEKNSNTIASDGGDGGNAGG 128
S S P P +P + P P PAP S S
Sbjct: 178 PPSPSPPVPPSPAPPSPAPPVPPSPAPPSPAPPVPPSPAPPSPPSPAPPSPP-------- 229
Query: 129 SKKPAWNKQPLNGVAVEIGPVMGAESWPALSESAKIPGKLPPESSSSKIAPPAAVDGSPS 188
S P P V P + + P+ A P PP + PA PS
Sbjct: 230 SPAPPSPSPPAPPSPVPPSPAPPSPAPPSPKPPAPPPPPSPPPPPPPRPPFPANTPMPPS 289
Query: 189 TSQGPIISHSPQRQGSTSNTKSSSMANNNLPNRPRPMRRISGSNIGPCPAQSSLSNPPTP 248
P P S + S + + P P P + P PA + S P+P
Sbjct: 290 PPSPPPSPAPPTPPTPPSPSPPSPVPPSPAPVPPSPAPPSPAPSPPPSPAPPTPSPSPSP 349
Query: 249 PPLP-PYPVYQLPPAVSYPNMLPS-IPDSSP 277
P P P P P+ S P+ +PS P SP
Sbjct: 350 SPSPSPSPSPSPSPSPS-PSPIPSPSPKPSP 379
Score = 37.7 bits (86), Expect = 0.077
Identities = 52/193 (26%), Positives = 62/193 (31%), Gaps = 28/193 (14%)
Query: 217 NLPNRPRPMRRISGSNIGPCPAQSSLSNPPTPPP--LPPYPVYQLPPAVSYPNMLPSIP- 273
N P P P S P PA S + P PP PP P PP+ + P+ P P
Sbjct: 38 NCPPSPAPPSPAPPSPAPPSPAPPSPAPPSPGPPSPAPPSPPSPAPPSPAPPSPAPPSPA 97
Query: 274 DSSPRDHHRNNNWDARPFVGGSSRRGHFGSHPRGDGSYHQNSYSSRREHDRGNYANTRDA 333
SP A P S P + S
Sbjct: 98 PPSPAPPSPAPPSPAPPSPAPPSPPSPAPPSPSPPAPPSPSPPS---------------- 141
Query: 334 HAPQPRMPPRGILRPPPPSTAAFLGPQ---TIGPFPAPVAYPDFYYFPTVPLDPFRGMPV 390
P P +PP P PPS + + P + P PAP + P VP P P
Sbjct: 142 --PAPPLPP----SPAPPSPSPPVPPSPSPPVPPSPAPPSPTPPSPSPPVPPSPAPPSPA 195
Query: 391 FPHMPSPATFFPA 403
P PSPA PA
Sbjct: 196 PPVPPSPAPPSPA 208
Score = 37.0 bits (84), Expect = 0.13
Identities = 55/221 (24%), Positives = 70/221 (30%), Gaps = 18/221 (8%)
Query: 4 TQNNHSPTSVPSPAPPSAETNNPNFIRKNLPSPWAQVVRGGSGWDTESQSQSPTGIHQSL 63
T + SP PSPAPPS P P+P + + P+ S
Sbjct: 177 TPPSPSPPVPPSPAPPSPAPPVPPSPAPPSPAPPVP--------PSPAPPSPPSPAPPSP 228
Query: 64 PSSSSSSSSSLTTVDQPPPSDDSPKAAVVSSSPKAVVVSSPLPAPMEKNSNTIASDGGDG 123
PS + S S PPS P A S P A P P A+
Sbjct: 229 PSPAPPSPSPPAPPSPVPPSPAPPSPAPPSPKPPAPPPPPSPPPPPPPRPPFPANTPMPP 288
Query: 124 GNAGGSKKPAWNKQPLNGVAVEIGPVMGAESWPALSESAKIPGKLPPESSSSKIAPPAAV 183
PA P P + P A +P P S + PP+
Sbjct: 289 SPPSPPPSPAPPTPPT--------PPSPSPPSPVPPSPAPVPPS-PAPPSPAPSPPPSPA 339
Query: 184 DGSPSTSQGPIISHSPQRQGSTSNTKSSSMANNNLPNRPRP 224
+PS S P S SP S S + S S + P +P P
Sbjct: 340 PPTPSPSPSPSPSPSPSPSPSPSPSPSPSPIPSPSP-KPSP 379
Score = 32.3 bits (72), Expect = 3.3
Identities = 29/84 (34%), Positives = 33/84 (38%), Gaps = 17/84 (20%)
Query: 9 SPTSVP-SPAPPSAETNNPNFIRKNLPSPWAQVVRGGSGWDTESQSQSPTGIHQSLPSSS 67
SP VP SPAPPS + P PSP T S S SP+ PS S
Sbjct: 317 SPAPVPPSPAPPSPAPSPP-------PSP---------APPTPSPSPSPSPSPSPSPSPS 360
Query: 68 SSSSSSLTTVDQPPPSDDSPKAAV 91
S S S + + P P AV
Sbjct: 361 PSPSPSPSPIPSPSPKPSPSPVAV 384
>LAH1_YEAST (P33399) La protein homolog (La ribonucleoprotein) (La
autoantigen homolog)
Length = 275
Score = 54.7 bits (130), Expect = 6e-07
Identities = 28/83 (33%), Positives = 56/83 (66%), Gaps = 5/83 (6%)
Query: 413 VNQIDYYFSDINLANDEFLKSNMDE-EGWVPITLIANFPRVKNLTSNIQLILDSMRNSNV 471
+ Q+++YFS+ N D FL++ ++ +GWVPI+ IA F R+K + +++++R+S +
Sbjct: 34 LKQVEFYFSEFNFPYDRFLRTTAEKNDGWVPISTIATFNRMKKYRP-VDKVIEALRSSEI 92
Query: 472 VDV--QGDKLRRRNWIDRLTSAQ 492
++V G+ ++RR +D LT+A+
Sbjct: 93 LEVSADGENVKRRVPLD-LTAAR 114
>YK82_MYCTU (Q10690) Hypothetical protein Rv2082
Length = 721
Score = 54.3 bits (129), Expect = 8e-07
Identities = 75/291 (25%), Positives = 105/291 (35%), Gaps = 53/291 (18%)
Query: 2 VTTQNNHSPTSVPSPAPPSAETNNPNFIRKNLPSPWAQVVRGGSGWDTESQSQSPTGIHQ 61
+T+ +SP P A PSA +++ SG T SP G
Sbjct: 195 MTSMTANSPAGSPFGAAPSAPSHSTTT----------------SGPPTAPTPTSPFGTAP 238
Query: 62 SLPSSSSSSSSSLTTVDQPPPSDDSPKAAVVSSSPKAVVVSSPLPAPMEKNSNTIASDGG 121
+ SSSS+SS T P P+ A + P VS PLP ++ + G
Sbjct: 239 MVLSSSSTSSGPPTA---PTPTSPFGTAPMPPGPPPPGTVSPPLP----PSAPAVGVGGP 291
Query: 122 DGGNAGGSKKPAWNKQPLN----GVAVEIGPVMG---AESWPALSESA------KIPGKL 168
AG A PL+ G + G G A ALS A +P
Sbjct: 292 SVPAAGMPPAAAAATAPLSPQSLGQSFTTGMTTGTPAAAGAQALSAGALHAATEPLPPPA 351
Query: 169 PPESSSSKIAPPAAV----------DGSPSTSQGPIISHSPQRQGSTSNTKSSSMANNNL 218
PP ++ + P A D +P+ S PI P +++ T + M N
Sbjct: 352 PPPTTPTVTTPTVATATTAGIPHIPDSAPTPSPAPIA--PPTTDNASAMTPIAPMVANGP 409
Query: 219 PNRPRPMRRISGSNIGPCPAQSSLSNPP--TPPPLPPYPVYQLPPAVSYPN 267
P P P + + GP PA + PP TPP PP P + A P+
Sbjct: 410 PASPAPP---AAAPAGPLPAYGADLRPPVTTPPATPPTPTGPISGAAVTPS 457
>PCLO_HUMAN (Q9Y6V0) Piccolo protein (Aczonin)
Length = 5183
Score = 54.3 bits (129), Expect = 8e-07
Identities = 70/288 (24%), Positives = 113/288 (38%), Gaps = 36/288 (12%)
Query: 4 TQNNHSPTSVPSPAPPS----------AETNNPNFIRKNLPSPWAQVVRGGSGWDTESQS 53
++ + S TSVP PS ++++P ++ + + + V + ++ +
Sbjct: 2098 SEPSESATSVPPSDTPSLTSSVSSVCTTDSSSPITTLDSITTVYTEPVDMITKFEDSEEI 2157
Query: 54 QSPTGIHQSLPSSSSSSSSSLTTVDQPPPSDDSPKAAVVSSSPKAV-VVSSPLPAPMEKN 112
S T S+ S SL PP S V+S S A ++ S +P P
Sbjct: 2158 SSSTYFPGSIIDYPEEISVSLDRT-APPDGRASADHIVISLSDMASSIIESVVPKPEGPV 2216
Query: 113 SNTIASDGGDGGNAGGSKKPAWNKQPLNGVAVEIGPVMGAESWPALSESAKIPGKLPPES 172
++T+++D K P+ E G + E A + ++ + S
Sbjct: 2217 ADTVSTD-----------LLISEKDPVKKAKKETGNGIILEVLEAYRDKKELEAERTKSS 2265
Query: 173 SSSKIA--PPAAVDGSPSTSQGPIISHSPQRQGST-------SNTKSSSMANNNLPNRPR 223
S + PP++V P Q +S + G T S S S + ++LP +PR
Sbjct: 2266 LSETVFDHPPSSVIALPMKEQ---LSTTYFTSGETFGQEKPASQLPSGSPSVSSLPAKPR 2322
Query: 224 PMRRISGSNIGPCPAQSSLSNPPTPPPLPPYPVYQLPPAVS-YPNMLP 270
P R S +I P PP PPP PP P LPP S P +LP
Sbjct: 2323 PFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILP 2370
Score = 51.2 bits (121), Expect = 7e-06
Identities = 59/261 (22%), Positives = 90/261 (33%), Gaps = 26/261 (9%)
Query: 12 SVPSPAPPSAETNNPNFIRKNLPSPWAQVVRGGSGWDTESQSQSPTGIHQSLPSSSSSSS 71
S+PSP+ P + P P Q S P+G+ + L +
Sbjct: 297 SLPSPSKPPIQQPTPG------KPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVK 350
Query: 72 SSLTTVDQPPPSDDSPKAAVVSSSPKAVVVSSPLPAPMEKNSNTIASDGGDGGNAGGSKK 131
+ QPP + P + + P A S P+ + +A G G K
Sbjct: 351 PPV----QPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVG------KT 400
Query: 132 PAWNKQPLNGVAVEIGPVMGAESWPALSESAKIPGKLPPESSSSKIAPPAAVDGS---PS 188
PA P ++G P L AK PG P + ++ PP+ GS P
Sbjct: 401 PAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPG---PTKTPAQTKPPSQQPGSTKPPP 457
Query: 189 TSQGPIISHSPQRQGSTSNTKSSSMANNNLPNRPRPMRRISGSNIGPCPAQSSLSNPPTP 248
GP SPQ+ GST + +P P + + P +Q+ P P
Sbjct: 458 QQPGP-AKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQFTKPV-SQTGFGKPLQP 515
Query: 249 PPLPPYPVYQLPPAVSYPNML 269
P + P + PP+ P +
Sbjct: 516 PTVSPSA--KQPPSQGLPKTI 534
Score = 35.4 bits (80), Expect = 0.38
Identities = 64/280 (22%), Positives = 96/280 (33%), Gaps = 50/280 (17%)
Query: 80 PPPSDDSPK---AAVVSSSPKAVVVSSPLPAPMEKNSNTIASDGGDGGNAGGSKKPAWNK 136
P PS PK A V ++S VS P P + + A+ D A KKP
Sbjct: 598 PVPSSPQPKLKTAPVTTTS----AVSKSSPQPQQTSPKKDAAPKQDLSKAPEPKKPP--- 650
Query: 137 QPLNGVAVEIGPVMGAESWPALSESAKIPGKLPPESSS-SKIAPPAAVDGSPSTSQGPII 195
P++ P L S K PPE+ S SK APP + P+
Sbjct: 651 -----------PLV---KQPTLHGSPSAKAKQPPEADSLSKPAPPKEPSVPSEQDKAPVA 696
Query: 196 SHSPQRQGSTSNTKSSSMANNNLPNRPRPMRRISGSNIGPCPAQSSLSNPPTPPPLPPYP 255
P++ T + +++++ +P +I QS T PP
Sbjct: 697 DDKPKQPKMVKPT-TDLVSSSSATTKP---------DIPSSKVQSQAEEKTT----PPLK 742
Query: 256 VYQLPPAVSYPNMLPSIPDSSPRDHHRNNNWDARPFVGGSSRRGHFGSHPRGDGSYHQNS 315
P+ S+P P+ +P D + RP S H G G +
Sbjct: 743 TDSAKPSQSFP---PTGEKVTPFD----SKAIPRP-ASDSKIISHPGPSSESKGQKQVDP 794
Query: 316 YSSRREHDRGNYANTRDAHAPQPRMPPRGILRPPPPSTAA 355
+ E + A T+ + P + P+G PP P A
Sbjct: 795 VQKKEEPKK---AQTKMSPKPDAKPMPKGSPTPPGPRPTA 831
Score = 34.7 bits (78), Expect = 0.66
Identities = 56/268 (20%), Positives = 86/268 (31%), Gaps = 48/268 (17%)
Query: 10 PTSVPSPAPPSAETNNPNFIRKNLPSPWAQVVRG---GSGWDTESQSQSPTGIHQSLPSS 66
P +P P + + K++ S + ++ G+G + +Q+P H LP
Sbjct: 216 PKPIPKQQGPGRDPLQQDGTPKSISSQQPEKIKSQPPGTGKPIQGPTQTPQTDHAKLPLQ 275
Query: 67 SSSSSSSLTTVDQPPPSDDSPKAAVVSSSPKAVVVSSPLPAPMEKNSNTIASDGGDGGNA 126
+S D +S K ++ S S + +P P ++ G +
Sbjct: 276 RDASRPQTKQADIV--RGESVKPSLPSPSKPPIQQPTPGKPPAQQ-------PGHEKSQP 326
Query: 127 GGSKKPAWNKQPLNGVAVEIGPVMGAESWPALSESAKIPGKLPPESSSSKIAPPAAVDGS 186
G +K PA +A + G V P ++ PP PPA GS
Sbjct: 327 GPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTK--------PPAQPLGPAKPPAQQTGS 378
Query: 187 --PSTSQ-GPIISHSPQRQGSTSNTKSSSMANNNLPNRPRPMRRISGSNIGPCPAQSSLS 243
PS+ Q GP P G T + P PA+
Sbjct: 379 EKPSSEQPGPKALAQPPGVGKTPAQQ-------------------------PGPAKPPTQ 413
Query: 244 NPPTPPPLPPYPVYQLPPAVSYPNMLPS 271
TP PL P Q P P P+
Sbjct: 414 QVGTPKPLAQQPGLQSPAKAPGPTKTPA 441
Score = 33.5 bits (75), Expect = 1.5
Identities = 56/238 (23%), Positives = 81/238 (33%), Gaps = 15/238 (6%)
Query: 53 SQSPTGIHQ--SLPSS------SSSSSSSLTTVDQPPPSDDSPKAAVVSSSPKAVVVSSP 104
SQ P+G SLP+ SSS S PPP P P +SP
Sbjct: 2305 SQLPSGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSP 2364
Query: 105 LPAPMEKNSNTIASDGGDGGNAGGSKKPAWNKQPLNGVAVEIGPVMGAESWPALSESAKI 164
P + K T+AS + L + + + P + + I
Sbjct: 2365 KPTILPKKKLTVASPVTTATPLFDAVTTLETTAVLRSNGLPVTRICTTAPPPVPPKPSSI 2424
Query: 165 PGKLP----PESSSSKIAPPAAVDGSPSTSQGPIISHSPQRQGSTSNTKSSSMANNNLPN 220
P L PE S IAP + P+T+Q P H S +++ + ++ +
Sbjct: 2425 PSGLVFTHRPEPSKPPIAPKPVIPQLPTTTQKPTDIHPKPTGLSLTSSMTLNLVTSADYK 2484
Query: 221 RPRPMRRISGSNIGPCPAQS-SLSNPPTPPPLPPYPVYQLPPAVSYPNMLPSIPDSSP 277
P P +S + P S SL+ LP P P S + S P SP
Sbjct: 2485 LPSPTSPLSPHSNKSSPRFSKSLTETYVVITLPSEP--GTPTDSSASQAITSWPLGSP 2540
>LAB_XENLA (P28049) Lupus La protein homolog B (La ribonucleoprotein
B) (La autoantigen homolog B)
Length = 427
Score = 53.9 bits (128), Expect = 1e-06
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 408 LSNVIVNQIDYYFSDINLANDEFLKSN-MDEEGWVPITLIANFPRVKNLTSNIQLILDSM 466
L I QI+YYF D NL D+FLK + + GWVP+ + F R+ LT++ +IL ++
Sbjct: 12 LDTKICEQIEYYFGDHNLPRDKFLKQQVLLDNGWVPLETMIKFNRLSKLTTDFNIILQAL 71
Query: 467 RNS--NVVDVQGDKLRRR 482
+ S ++++ +K + R
Sbjct: 72 KKSKTELLEINEEKCKIR 89
>SRO9_YEAST (P25567) SRO9 protein
Length = 466
Score = 52.8 bits (125), Expect = 2e-06
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 389 PVFPHMPSPATFFPAAESSLS-NVIVNQIDYYFSDINLANDEFLKSNMDEEGWVPITLIA 447
P P + F+P ++ N I QI+YYFS+ NL D +L+S + ++G+ P++LI+
Sbjct: 273 PQQPMVKLQQQFYPVQPVLMAINNIARQIEYYFSEENLTVDNYLRSKLSKDGFAPLSLIS 332
Query: 448 NFPRVKNLT--SNIQLILDSMR 467
F RV N++ + LIL ++R
Sbjct: 333 KFYRVVNMSFGGDTNLILAALR 354
>LAA_XENLA (P28048) Lupus La protein homolog A (La ribonucleoprotein
A) (La autoantigen homolog A)
Length = 428
Score = 52.8 bits (125), Expect = 2e-06
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 412 IVNQIDYYFSDINLANDEFLKSN-MDEEGWVPITLIANFPRVKNLTSNIQLILDSMRNS- 469
I QI+YYF D NL D+FLK + ++GWVP+ + F R+ LT++ IL +++ S
Sbjct: 17 ICEQIEYYFGDHNLPRDKFLKQQILLDDGWVPLETMIKFNRLSKLTTDFNTILQALKKSK 76
Query: 470 -NVVDVQGDKLRRR 482
++++ +K + R
Sbjct: 77 TELLEINEEKCKIR 90
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.309 0.128 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,087,932
Number of Sequences: 164201
Number of extensions: 3735772
Number of successful extensions: 25820
Number of sequences better than 10.0: 1097
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 969
Number of HSP's that attempted gapping in prelim test: 17345
Number of HSP's gapped (non-prelim): 4809
length of query: 546
length of database: 59,974,054
effective HSP length: 115
effective length of query: 431
effective length of database: 41,090,939
effective search space: 17710194709
effective search space used: 17710194709
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 68 (30.8 bits)
Medicago: description of AC146790.7