BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146784.10 + phase: 0 
         (168 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

W70T_RAT (O35828) 70 kDa WD-repeat tumor rejection antigen (Frag...    32  0.52
SYFA_METKA (Q8TYM5) Phenylalanyl-tRNA synthetase alpha chain (EC...    32  0.68
SDE3_ARATH (Q8GYD9) Probable RNA helicase SDE3 (EC 3.6.1.-) (Sil...    30  2.6
SNXI_HUMAN (Q96RF0) Sorting nexin 18 (Sorting nexin associated G...    30  3.4
GSPJ_ERWCH (P24689) General secretion pathway protein J precurso...    30  3.4
CAL1_PARTE (Q94714) Cathepsin L1 precursor (EC 3.4.22.15)              30  3.4
SYTB_HUMAN (Q9BT88) Synaptotagmin-11 (Synaptotagmin XI) (SytXI)        29  4.4
SYFB_STRAW (Q828C6) Phenylalanyl-tRNA synthetase beta chain (EC ...    29  5.8
YKU2_YEAST (P36042) Hypothetical 21.2 kDa protein in TOR2-MNN4 i...    28  7.6
YHBZ_ECOLI (P42641) Hypothetical GTP-binding protein yhbZ              28  7.6
Y4CA_RHISN (P55383) Hypothetical 133.7 kDa protein y4cA                28  7.6
SNX9_MOUSE (Q91VH2) Sorting nexin 9                                    28  7.6
Y4IJ_RHISN (P55493) Hypothetical 65.5 kDa protein y4iJ                 28  9.9
SYJ1_MOUSE (Q8CHC4) Synaptojanin 1 (EC 3.1.3.36) (Synaptic inosi...    28  9.9

>W70T_RAT (O35828) 70 kDa WD-repeat tumor rejection antigen
           (Fragment)
          Length = 443

 Score = 32.3 bits (72), Expect = 0.52
 Identities = 21/55 (38%), Positives = 27/55 (48%), Gaps = 2/55 (3%)

Query: 6   LAYCFYNIVFQVTIKQIKSESTELTLDAGKGDCVLHVTVVTPVPEASFFLRLPSF 60
           L +C+ +IV   T+       T L L  GKGD    V +   +PEA FFL   SF
Sbjct: 240 LQHCWASIVAPSTLLPSYDPDTGLVLLTGKGD--TRVFLYEVIPEAPFFLECNSF 292


>SYFA_METKA (Q8TYM5) Phenylalanyl-tRNA synthetase alpha chain (EC
           6.1.1.20) (Phenylalanine--tRNA ligase alpha chain)
           (PheRS)
          Length = 524

 Score = 32.0 bits (71), Expect = 0.68
 Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 24/134 (17%)

Query: 19  IKQIKSESTELTLDAGKGDCVLHVTVVTPVPEASFFLRLPSFDKILTPVNGAYFLIFTVI 78
           +K++ +E   + L+ G       V V  P+ E+SF+    +FD +  P + A        
Sbjct: 260 LKEVINEIRRIFLEMG------FVEVSGPLVESSFW----NFDALFQPQDHA-------- 301

Query: 79  VFAVTWACCCIFKKKPRDEIPYQELEMALPESASATVVESAEGWDQGWDDDWDDNVAVKS 138
             A         K+    E+P +E+     E   A   +  +   +GW  +WD+ VA K+
Sbjct: 302 --AREMQDTFYLKEPAEAELPDEEVV----EKVRAVHEDGGDTGSRGWGYEWDEGVARKT 355

Query: 139 PVVRHAGSISANGL 152
            +  H  ++S   L
Sbjct: 356 VLRTHTTAVSVRKL 369


>SDE3_ARATH (Q8GYD9) Probable RNA helicase SDE3 (EC 3.6.1.-)
           (Silencing defective protein 3)
          Length = 1002

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 15/43 (34%), Positives = 19/43 (43%), Gaps = 3/43 (6%)

Query: 126 WDDDWDDNVAVKSPVVRHAGSISANGLTSRSSNKDGWEDNWDD 168
           W D W++N   K       G  S  G T +   KD W D WD+
Sbjct: 868 WSDGWNNNGGTKEKNEWSDGWNSNGGGTKK---KDEWSDGWDN 907


>SNXI_HUMAN (Q96RF0) Sorting nexin 18 (Sorting nexin associated
           Golgi protein 1)
          Length = 628

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 9/20 (45%), Positives = 15/20 (75%)

Query: 117 ESAEGWDQGWDDDWDDNVAV 136
           ++++G D  WDD+WDD+  V
Sbjct: 145 QASQGSDDDWDDEWDDSSTV 164


>GSPJ_ERWCH (P24689) General secretion pathway protein J precursor
           (Pectic enzymes secretion protein outJ)
          Length = 206

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 13/40 (32%), Positives = 20/40 (49%), Gaps = 1/40 (2%)

Query: 129 DWDDNVAVKSPVVRHAGSISANGLTSRSSNKDGWEDNWDD 168
           D  + ++ + P VR   +    G   R   KDGW++ WDD
Sbjct: 128 DSSEPLSTQEPAVRPVLT-GVTGFVLRFFGKDGWQERWDD 166


>CAL1_PARTE (Q94714) Cathepsin L1 precursor (EC 3.4.22.15)
          Length = 314

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 17/57 (29%), Positives = 26/57 (44%), Gaps = 1/57 (1%)

Query: 90  FKKKPRDEIPYQELEMALPESASATVVESAEGWDQGWDDDWDDNVAVKSPVVRHAGS 146
           F    + E     L + +P +A      S   + +G + DW DN  VK P V++ GS
Sbjct: 76  FADMSQQEFAQTYLSLKVPRTAKLNAANSNFQY-KGAEVDWTDNKKVKYPAVKNQGS 131


>SYTB_HUMAN (Q9BT88) Synaptotagmin-11 (Synaptotagmin XI) (SytXI)
          Length = 431

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)

Query: 58  PSFD--KILTPVNGAYFLIFTVIVFAVTWACCCIFKKKPRDEIPYQELEM 105
           PSFD   ++  + GA  L+  V V    W+CC    +K     PY+ + M
Sbjct: 9   PSFDVSPVVAGLIGASVLVVCVSVTVFVWSCCHQQAEKKHKNPPYKFIHM 58


>SYFB_STRAW (Q828C6) Phenylalanyl-tRNA synthetase beta chain (EC
           6.1.1.20) (Phenylalanine--tRNA ligase beta chain)
           (PheRS)
          Length = 833

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 7/61 (11%)

Query: 92  KKPRDEIPYQELEMALPESASATVV------ESAEGWDQGWDDDWDDNVAVKSPVVRHAG 145
           ++P DE     L  ALPE      V      E A  W +G   DW D V     + R AG
Sbjct: 605 RRPTDE-EIASLTAALPEQPRHAAVVLAGAREQAGWWGKGRPADWADAVEAARTLAREAG 663

Query: 146 S 146
           +
Sbjct: 664 T 664


>YKU2_YEAST (P36042) Hypothetical 21.2 kDa protein in TOR2-MNN4
           intergenic region
          Length = 193

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 12/21 (57%), Positives = 15/21 (71%)

Query: 46  TPVPEASFFLRLPSFDKILTP 66
           +P+P AS FL LPSF  +L P
Sbjct: 119 SPLPPASSFLLLPSFSSLLLP 139


>YHBZ_ECOLI (P42641) Hypothetical GTP-binding protein yhbZ
          Length = 390

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 10/17 (58%), Positives = 13/17 (75%)

Query: 117 ESAEGWDQGWDDDWDDN 133
           E AE  D+ WDDDWD++
Sbjct: 363 EIAEEDDEDWDDDWDED 379


>Y4CA_RHISN (P55383) Hypothetical 133.7 kDa protein y4cA
          Length = 1197

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 6/68 (8%)

Query: 101 QELEMALPESASATVVESAEGWDQGWDDDWDDNVAVKSPVVRHAGSISANGLTSRSSNKD 160
           ++L++ALP +    + ++AEG     D DW D+V     V+   G   A  L    S++ 
Sbjct: 850 RQLQLALPANWWDRLWQAAEGEP---DVDWGDDVETYDRVINSTGGSLAEALLQAISSQ- 905

Query: 161 GWEDNWDD 168
              +N DD
Sbjct: 906 --RENGDD 911


>SNX9_MOUSE (Q91VH2) Sorting nexin 9
          Length = 595

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 14/39 (35%), Positives = 20/39 (50%), Gaps = 1/39 (2%)

Query: 119 AEGWDQGWDDDWDDNVAVKSPVVRHAGSISANGLTSRSS 157
           A G D  WD+DWDD  +  SP  + +    A G+   +S
Sbjct: 157 ATGDDDEWDEDWDDPKS-SSPYFKDSEPAEAGGIQRGNS 194


>Y4IJ_RHISN (P55493) Hypothetical 65.5 kDa protein y4iJ
          Length = 596

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 15/45 (33%), Positives = 23/45 (50%), Gaps = 2/45 (4%)

Query: 103 LEMALPES--ASATVVESAEGWDQGWDDDWDDNVAVKSPVVRHAG 145
           L++  PE+  A +  V     WD  W D    N ++  P+VR+AG
Sbjct: 257 LDLERPENYVAQSAPVAFPHIWDTSWFDWVQYNASIMQPMVRNAG 301


>SYJ1_MOUSE (Q8CHC4) Synaptojanin 1 (EC 3.1.3.36) (Synaptic
            inositol-1,4,5-trisphosphate 5-phosphatase 1)
          Length = 1574

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 23/72 (31%), Positives = 40/72 (54%), Gaps = 6/72 (8%)

Query: 92   KKPRDEIPYQELEMALPESASATVV----ESAEGWDQGWDDDWDDNVAVKSPVVRHAGSI 147
            K   +E+  +++ + LP SAS+T++    E A  +D   D D D +  V+  + +H    
Sbjct: 975  KHLEEEMSLEKISVTLPSSASSTLLGEDAEVAADFDMEGDVD-DYSAEVEELLPQHLQPS 1033

Query: 148  SANGL-TSRSSN 158
            S++GL TS SS+
Sbjct: 1034 SSSGLGTSPSSS 1045


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.319    0.135    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,312,212
Number of Sequences: 164201
Number of extensions: 756328
Number of successful extensions: 1861
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1849
Number of HSP's gapped (non-prelim): 21
length of query: 168
length of database: 59,974,054
effective HSP length: 102
effective length of query: 66
effective length of database: 43,225,552
effective search space: 2852886432
effective search space used: 2852886432
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)