BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146775.17 + phase: 0 /pseudo
(140 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
MANA_RHOMR (P49425) Mannan endo-1,4-beta-mannosidase (EC 3.2.1.78) 29 2.8
WN9A_HUMAN (O14904) Wnt-9a protein precursor (Wnt-14) 29 3.6
TALA_POVJC (P03072) Large T antigen 29 3.6
A85C_MYCAV (O52972) Antigen 85-C precursor (85C) (Antigen 85 com... 29 3.6
KHSE_PYRAE (Q8ZZX3) Homoserine kinase (EC 2.7.1.39) (HK) 28 4.8
GPMI_STRCO (Q9L214) 2,3-bisphosphoglycerate-independent phosphog... 28 4.8
WN9A_MOUSE (Q8R5M2) Wnt-9a protein precursor (Wnt-14) 28 6.2
PM21_CHLPN (Q9Z6U5) Probable outer membrane protein pmp21 precur... 28 8.1
>MANA_RHOMR (P49425) Mannan endo-1,4-beta-mannosidase (EC 3.2.1.78)
Length = 1021
Score = 29.3 bits (64), Expect = 2.8
Identities = 17/45 (37%), Positives = 24/45 (52%), Gaps = 3/45 (6%)
Query: 16 KRR---LLISINVLGSAGPIRFVVNEEELVEAVIDTTLKSYAREG 57
KRR LL+ + G AG IR + EL+ +D+TL Y+ G
Sbjct: 461 KRRMTLLLVWLIFTGVAGEIRLEAEDGELLGVAVDSTLTGYSGRG 505
>WN9A_HUMAN (O14904) Wnt-9a protein precursor (Wnt-14)
Length = 365
Score = 28.9 bits (63), Expect = 3.6
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 82 LSPWDKIGSHGARNFVLCKKPQAATNEAAAEDGSGTSSLPR-RGSGS 127
L+P+ ++G H + K + TNEAA E +G S PR R SG+
Sbjct: 233 LAPFHEVGKHLKHKYETALKVGSTTNEAAGE--AGAISPPRGRASGA 277
>TALA_POVJC (P03072) Large T antigen
Length = 688
Score = 28.9 bits (63), Expect = 3.6
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 35 VVNEEELVEAVIDTTLKSYAREGRLPVLGNDHSAFFLYCPHLGSDAALSPWDKIGSHGAR 94
V+N EE +E ++D + G +PV+ A+ C L D DK+
Sbjct: 4 VLNREESME-LMDLLGLDRSAWGNIPVM---RKAYLKKCKELHPDKG-GDEDKMKR---M 55
Query: 95 NFVLCKKPQAATNEAAAEDGSGTSS-LPRRGSGSWKSWFN 133
NF+ K Q + G+ SS +P G+ W+SW+N
Sbjct: 56 NFLYKKMEQGVKVAHQPDFGTWNSSEVPTYGTDEWESWWN 95
>A85C_MYCAV (O52972) Antigen 85-C precursor (85C) (Antigen 85
complex C) (Ag85C) (Mycolyl transferase 85C) (EC
2.3.1.-) (Fibronectin-binding protein C)
Length = 352
Score = 28.9 bits (63), Expect = 3.6
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 58 RLPVLGNDHSAFFLYCPHLGSDAALSPWDKIGSHGARNFVLCKKPQAATNEAAAEDGSGT 117
++P L +++ ++YC + G+ + L D + + L Q N AAA +G
Sbjct: 240 QIPRLVANNTRIWVYCGN-GTPSDLGG-DNVPAKFLEGLTLRTNEQFQNNYAAAGGRNGV 297
Query: 118 SSLPRRGSGSWKSW 131
+ P G+ SW W
Sbjct: 298 FNFPANGTHSWPYW 311
>KHSE_PYRAE (Q8ZZX3) Homoserine kinase (EC 2.7.1.39) (HK)
Length = 297
Score = 28.5 bits (62), Expect = 4.8
Identities = 14/32 (43%), Positives = 18/32 (55%)
Query: 26 LGSAGPIRFVVNEEELVEAVIDTTLKSYAREG 57
L AGP + E+ EAV D L++YA EG
Sbjct: 248 LSGAGPSVIALVNEKEAEAVRDAVLRAYAEEG 279
>GPMI_STRCO (Q9L214) 2,3-bisphosphoglycerate-independent
phosphoglycerate mutase (EC 5.4.2.1)
(Phosphoglyceromutase) (BPG-independent PGAM) (iPGM)
Length = 511
Score = 28.5 bits (62), Expect = 4.8
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 20 LISINVLGSAGPIRFVVNEEELVEAVIDTTLKSYAREGRLPVLGNDH 66
L +I+V+G G + V E +A +D L++ GR V DH
Sbjct: 392 LANIDVVGHTGNLAATVTACEATDAAVDQILQAARNSGRWVVAVGDH 438
>WN9A_MOUSE (Q8R5M2) Wnt-9a protein precursor (Wnt-14)
Length = 365
Score = 28.1 bits (61), Expect = 6.2
Identities = 18/47 (38%), Positives = 25/47 (52%), Gaps = 3/47 (6%)
Query: 82 LSPWDKIGSHGARNFVLCKKPQAATNEAAAEDGSGTSSLPR-RGSGS 127
L+P+ ++G H + K + TNEA E +G S PR R SGS
Sbjct: 233 LAPFHEVGKHLKHKYETSLKVGSTTNEATGE--AGAISPPRGRASGS 277
>PM21_CHLPN (Q9Z6U5) Probable outer membrane protein pmp21 precursor
(Polymorphic membrane protein 21)
Length = 1609
Score = 27.7 bits (60), Expect = 8.1
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 16/76 (21%)
Query: 22 SINVLGSAGPIRFVVNEEELVEAVIDTTLKSYA--------------REGRLPVLGNDHS 67
+IN++G++G I F+ N+ ++E + T + YA G + +GN
Sbjct: 534 NINIIGNSGAITFLKNKASVLEVM--TQAEDYAGGGALWGHNVLLDSNSGNIQFIGNIGG 591
Query: 68 AFFLYCPHLGSDAALS 83
+ F ++G A LS
Sbjct: 592 STFWIGEYVGGGAILS 607
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.314 0.131 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,204,036
Number of Sequences: 164201
Number of extensions: 623041
Number of successful extensions: 1118
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1115
Number of HSP's gapped (non-prelim): 8
length of query: 140
length of database: 59,974,054
effective HSP length: 99
effective length of query: 41
effective length of database: 43,718,155
effective search space: 1792444355
effective search space used: 1792444355
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)
Medicago: description of AC146775.17