BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146775.16 - phase: 0
(172 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YC31_SCHPO (O14065) Hypothetical protein C962.01 in chromosome III 60 3e-09
ITN1_MOUSE (Q9Z0R4) Intersectin 1 (EH and SH3 domains protein 1) 58 9e-09
ITN1_HUMAN (Q15811) Intersectin 1 (SH3 domain-containing protein... 58 9e-09
NED4_MOUSE (P46935) E3 ubiquitin-protein ligase Nedd-4 (EC 6.3.2.-) 55 6e-08
NED4_HUMAN (P46934) E3 ubiquitin-protein ligase Nedd-4 (EC 6.3.2.-) 55 1e-07
NED4_RAT (Q62940) E3 ubiquitin-protein ligase Nedd-4 (EC 6.3.2.-) 54 2e-07
ITN2_HUMAN (Q9NZM3) Intersectin 2 (SH3 domain-containing protein... 53 4e-07
ITN2_MOUSE (Q9Z0R6) Intersectin 2 (SH3 domain-containing protein... 52 7e-07
PCLO_CHICK (Q9PU36) Piccolo protein (Aczonin) (Fragment) 52 9e-07
PCLO_HUMAN (Q9Y6V0) Piccolo protein (Aczonin) 51 1e-06
YNI7_YEAST (P48231) Hypothetical 132.5 kDa protein in TOP2-MKT1 ... 50 3e-06
KPC1_DROME (P05130) Protein kinase C, brain isozyme (EC 2.7.1.-)... 49 7e-06
PCLO_RAT (Q9JKS6) Piccolo protein (Multidomain presynaptic cytom... 48 1e-05
PCLO_MOUSE (Q9QYX7) Piccolo protein (Presynaptic cytomatrix prot... 48 1e-05
SYT7_HUMAN (O43581) Synaptotagmin-7 (Synaptotagmin VII) (SytVII) 46 5e-05
RSG5_HUMAN (O43374) Ras GTPase-activating protein 4 (RasGAP-acti... 46 5e-05
KPC1_APLCA (Q16974) Calcium-dependent protein kinase C (EC 2.7.1... 45 6e-05
DO2B_MOUSE (P70169) Double C2-like domain containing protein bet... 45 8e-05
DO2B_HUMAN (Q14184) Double C2-like domain containing protein bet... 45 8e-05
DO2B_RAT (P70610) Double C2-like domain containing protein beta ... 45 1e-04
>YC31_SCHPO (O14065) Hypothetical protein C962.01 in chromosome III
Length = 1429
Score = 59.7 bits (143), Expect = 3e-09
Identities = 32/87 (36%), Positives = 49/87 (55%), Gaps = 1/87 (1%)
Query: 7 GLLKLRIKRGINLAIRDSNSSDPYVVVNIGHEQKLKTRVVKNNCNPEWNEELTLSIRDVR 66
G L ++ G NL I D SSDP+VV+ + E K++V+K N NP WNEE + +++
Sbjct: 1078 GSLHFMLQDGQNLPIGDIRSSDPFVVLKLNGESAFKSKVIKKNLNPVWNEEADIVVQNRV 1137
Query: 67 VPIC-LTVFDKDTFFVDDKMGDAEIDL 92
+ + L +D D D +G + IDL
Sbjct: 1138 LDVLELVCYDWDMGEKPDVLGTSNIDL 1164
Score = 45.1 bits (105), Expect = 8e-05
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 3 NNVLGLLKLRIKRGINLAIRD--SNSSDPYVVVNIGHEQKLKTRVVKNNCNPEWNEELTL 60
+N++G+++L + + +L + + SDPY V +G+ +T NN NP WNE L +
Sbjct: 753 DNLVGVMRLSVIKANDLVNVELPTRKSDPYARVIVGNSVVARTVYTPNNLNPIWNEILYV 812
Query: 61 SIRDVRVPICLTVFDKDTFFVDDKMGDAEIDLKPYTQCVK 100
I I L D + D +G A I+++ Y + K
Sbjct: 813 PIMADTKTIDLEAMDYEESGNDRSLGYASINVQKYIRNAK 852
>ITN1_MOUSE (Q9Z0R4) Intersectin 1 (EH and SH3 domains protein 1)
Length = 1714
Score = 58.2 bits (139), Expect = 9e-09
Identities = 39/122 (31%), Positives = 63/122 (50%), Gaps = 15/122 (12%)
Query: 6 LGLLKLRIKRGINLA-IRDSNSSDPYVVVNIGHEQKLKTRVVKNNCNPEWNEELTLSIRD 64
+G L + + GI L R S+PY V +G + + T+ +++ NP+WN IRD
Sbjct: 1588 IGRLMVNVVEGIELKPCRSHGKSNPYCEVTMGSQCHI-TKTIQDTLNPKWNSNCQFFIRD 1646
Query: 65 VRVPI-CLTVFDKDTFFVDDKMGDAEI---DLK-------PYTQCVKMKLDTLPNGCAIK 113
+ + C+TVF++D F DD +G EI D+K P T+C + L +P G +
Sbjct: 1647 LEQEVLCITVFERDQFSPDDFLGRTEIRVADIKKDQGSKGPVTKC--LLLHEVPTGEIVV 1704
Query: 114 RV 115
R+
Sbjct: 1705 RL 1706
>ITN1_HUMAN (Q15811) Intersectin 1 (SH3 domain-containing protein 1A)
(SH3P17)
Length = 1721
Score = 58.2 bits (139), Expect = 9e-09
Identities = 39/122 (31%), Positives = 63/122 (50%), Gaps = 15/122 (12%)
Query: 6 LGLLKLRIKRGINLA-IRDSNSSDPYVVVNIGHEQKLKTRVVKNNCNPEWNEELTLSIRD 64
+G L + + GI L R S+PY V +G + + T+ +++ NP+WN IRD
Sbjct: 1595 IGRLMVNVVEGIELKPCRSHGKSNPYCEVTMGSQCHI-TKTIQDTLNPKWNSNCQFFIRD 1653
Query: 65 VRVPI-CLTVFDKDTFFVDDKMGDAEI---DLK-------PYTQCVKMKLDTLPNGCAIK 113
+ + C+TVF++D F DD +G EI D+K P T+C + L +P G +
Sbjct: 1654 LEQEVLCITVFERDQFSPDDFLGRTEIRVADIKKDQGSKGPVTKC--LLLHEVPTGEIVV 1711
Query: 114 RV 115
R+
Sbjct: 1712 RL 1713
>NED4_MOUSE (P46935) E3 ubiquitin-protein ligase Nedd-4 (EC 6.3.2.-)
Length = 887
Score = 55.5 bits (132), Expect = 6e-08
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 1 MDNNVLGLLKLRIKRGINLAIRDS-NSSDPYVVVNI-----GHEQKLKTRVVKNNCNPEW 54
+ N+ ++++++ GI LA +D +SDPYV V + G ++T+ +K + NP+W
Sbjct: 72 LHNDDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKW 131
Query: 55 NEELTLSIRDVRVPICLTVFDKDTFFVDDKMGDAEIDLKP 94
NEE+ + R I VFD++ DD +G ++ L P
Sbjct: 132 NEEILFRVLPQRHRILFEVFDENRLTRDDFLGQVDVPLYP 171
>NED4_HUMAN (P46934) E3 ubiquitin-protein ligase Nedd-4 (EC 6.3.2.-)
Length = 1000
Score = 54.7 bits (130), Expect = 1e-07
Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 8 LLKLRIKRGINLAIRDS-NSSDPYVVVNI-----GHEQKLKTRVVKNNCNPEWNEELTLS 61
++++R+ GI LA +D +SDPYV V + G ++T+ +K + NP+WNEE+
Sbjct: 120 IVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFR 179
Query: 62 IRDVRVPICLTVFDKDTFFVDDKMGDAEIDLKP 94
+ + + VFD++ DD +G ++ L P
Sbjct: 180 VHPQQHRLLFEVFDENRLTRDDFLGQVDVPLYP 212
>NED4_RAT (Q62940) E3 ubiquitin-protein ligase Nedd-4 (EC 6.3.2.-)
Length = 887
Score = 53.9 bits (128), Expect = 2e-07
Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 6/99 (6%)
Query: 2 DNNVLGLLKLRIKRGINLAIRDS-NSSDPYVVVNI-----GHEQKLKTRVVKNNCNPEWN 55
+N+ ++++++ GI LA +D +SDPYV V + G ++T+ +K + NP+WN
Sbjct: 70 NNDDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGVLTSVQTKTIKKSLNPKWN 129
Query: 56 EELTLSIRDVRVPICLTVFDKDTFFVDDKMGDAEIDLKP 94
EE+ + + I VFD++ DD +G ++ L P
Sbjct: 130 EEILFRVLPQQHRILFEVFDENRLTRDDFLGQVDVPLYP 168
>ITN2_HUMAN (Q9NZM3) Intersectin 2 (SH3 domain-containing protein 1B)
(SH3P18) (SH3P18-like WASP associated protein)
Length = 1696
Score = 52.8 bits (125), Expect = 4e-07
Identities = 29/87 (33%), Positives = 48/87 (54%), Gaps = 3/87 (3%)
Query: 6 LGLLKLRIKRGINL-AIRDSNSSDPYVVVNIGHEQKLKTRVVKNNCNPEWNEELTLSIRD 64
+G L + + L A + + S+PY +++G Q TR +++ NP+WN I+D
Sbjct: 1567 IGRLMVHVIEATELKACKPNGKSNPYCEISMG-SQSYTTRTIQDTLNPKWNFNCQFFIKD 1625
Query: 65 VRVPI-CLTVFDKDTFFVDDKMGDAEI 90
+ + CLT+FD+D F DD +G EI
Sbjct: 1626 LYQDVLCLTLFDRDQFSPDDFLGRTEI 1652
>ITN2_MOUSE (Q9Z0R6) Intersectin 2 (SH3 domain-containing protein 1B)
(EH and SH3 domains protein 2) (EH domain and SH3 domain
regulator of endocytosis 2)
Length = 1658
Score = 52.0 bits (123), Expect = 7e-07
Identities = 29/87 (33%), Positives = 48/87 (54%), Gaps = 3/87 (3%)
Query: 6 LGLLKLRIKRGINL-AIRDSNSSDPYVVVNIGHEQKLKTRVVKNNCNPEWNEELTLSIRD 64
+G L + + L A + + S+PY V++G Q TR +++ NP+WN I+D
Sbjct: 1529 IGRLMVHVIEATELKACKPNGKSNPYCEVSMG-SQSYTTRTLQDTLNPKWNFNCQFFIKD 1587
Query: 65 VRVPI-CLTVFDKDTFFVDDKMGDAEI 90
+ + CLT+FD+D F DD +G E+
Sbjct: 1588 LYQDVLCLTMFDRDQFSPDDFLGRTEV 1614
>PCLO_CHICK (Q9PU36) Piccolo protein (Aczonin) (Fragment)
Length = 5120
Score = 51.6 bits (122), Expect = 9e-07
Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 23/131 (17%)
Query: 6 LGLLKLRIKRGINLAIRDSNS-SDPYVVV-------------NIGHEQKLKTRVVKNNCN 51
LG L + I + NLA RD+N SDP+V V N E K +T+ V+ + N
Sbjct: 4625 LGNLIIHILQARNLAPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLN 4684
Query: 52 PEWNEEL---TLSIRDV-RVPICLTVFDKDTFFVDDKMGDAEIDLKPYTQCVKMKLDTLP 107
PEWN+ + +S + + + +TV+D D F +D +G+ IDL +Q LD P
Sbjct: 4685 PEWNQTVIYKNISTEQLKKKTLEVTVWDYDRFSSNDFLGEVLIDLSSVSQ-----LDNTP 4739
Query: 108 NGCAIKRVQAN 118
+K N
Sbjct: 4740 RWYPLKEQSEN 4750
>PCLO_HUMAN (Q9Y6V0) Piccolo protein (Aczonin)
Length = 5183
Score = 51.2 bits (121), Expect = 1e-06
Identities = 36/99 (36%), Positives = 58/99 (58%), Gaps = 9/99 (9%)
Query: 3 NNVLGLLKLRIKRGINLAIRDSNS-SDPYVVVNI----GHEQKLKTRVVKNNCNPEWNEE 57
N LG L + I + NL RD+N SDP+V V + G E K +T+ V+ + NPEWN+
Sbjct: 4574 NYDLGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGAEYKRRTKHVQKSLNPEWNQT 4633
Query: 58 L---TLSIRDV-RVPICLTVFDKDTFFVDDKMGDAEIDL 92
+ ++S+ + + + +TV+D D F +D +G+ IDL
Sbjct: 4634 VIYKSISMEQLKKKTLEVTVWDYDRFSSNDFLGEVLIDL 4672
>YNI7_YEAST (P48231) Hypothetical 132.5 kDa protein in TOP2-MKT1
intergenic region
Length = 1178
Score = 49.7 bits (117), Expect = 3e-06
Identities = 26/90 (28%), Positives = 46/90 (50%), Gaps = 3/90 (3%)
Query: 6 LGLLKLRIKRGINLAI---RDSNSSDPYVVVNIGHEQKLKTRVVKNNCNPEWNEELTLSI 62
+G+L++++K L + DPY+ + + KT+V KN+ NP WNE + + +
Sbjct: 377 IGVLEIKVKNAHGLRKLVGMIKKTVDPYLTFELSGKIVGKTKVFKNSANPVWNESIYILL 436
Query: 63 RDVRVPICLTVFDKDTFFVDDKMGDAEIDL 92
+ P+ + V+DK D KMG +L
Sbjct: 437 QSFTDPLTIAVYDKRETLSDKKMGTVIFNL 466
Score = 37.4 bits (85), Expect = 0.017
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Query: 7 GLLKLRIKRGINL-AIRDSNSSDPYVVVNIGHEQK---LKTRVVKNNCNPEWNEELTLSI 62
G LK+ K NL + + SDPYV + + KT V K NP WNE T+ +
Sbjct: 983 GDLKITAKSAENLIGVNKNGYSDPYVEFFLNEKSTSPFFKTAVQKKTLNPTWNESKTIEV 1042
Query: 63 RDVRVPICLTVFDKD 77
+ RV LT+ KD
Sbjct: 1043 SN-RVNDYLTINVKD 1056
Score = 35.0 bits (79), Expect = 0.086
Identities = 22/86 (25%), Positives = 38/86 (43%), Gaps = 1/86 (1%)
Query: 6 LGLLKLRIKRGINLAIRDS-NSSDPYVVVNIGHEQKLKTRVVKNNCNPEWNEELTLSIRD 64
+G+L++ I + NL DS PY V++ + +T NP WN+ + +S+
Sbjct: 649 IGMLRVFINKAENLRNPDSLGKISPYAKVSVNGVARGRTNERIETLNPIWNQSIYVSVTS 708
Query: 65 VRVPICLTVFDKDTFFVDDKMGDAEI 90
+ + F DT D +G I
Sbjct: 709 PLQKVSIDCFGIDTNGDDHNLGSLNI 734
>KPC1_DROME (P05130) Protein kinase C, brain isozyme (EC 2.7.1.-)
(PKC) (dPKC53E(BR))
Length = 679
Score = 48.5 bits (114), Expect = 7e-06
Identities = 35/86 (40%), Positives = 45/86 (51%), Gaps = 7/86 (8%)
Query: 8 LLKLRIKRGINLAIRDSNS-SDPYVVVNI----GHEQKLKTRVVKNNCNPEWNEELTLSI 62
LL ++IK G NL D N SDPYV V + + K KTR +K NP WNE LT +
Sbjct: 190 LLTVQIKEGRNLIPMDPNGLSDPYVKVKLIPDDKDQSKKKTRTIKACLNPVWNETLTYDL 249
Query: 63 R--DVRVPICLTVFDKDTFFVDDKMG 86
+ D I + V+D D +D MG
Sbjct: 250 KPEDKDRRILIEVWDWDRTSRNDFMG 275
>PCLO_RAT (Q9JKS6) Piccolo protein (Multidomain presynaptic cytomatrix
protein)
Length = 5085
Score = 48.1 bits (113), Expect = 1e-05
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 18/108 (16%)
Query: 3 NNVLGLLKLRIKRGINLAIRDSNS-SDPYVVV-------------NIGHEQKLKTRVVKN 48
N LG L + I + NL RD+N SDP+V V N E K +T+ V+
Sbjct: 4648 NYDLGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQK 4707
Query: 49 NCNPEWNEEL---TLSIRD-VRVPICLTVFDKDTFFVDDKMGDAEIDL 92
+ NPEWN+ + ++S+ ++ + +TV+D D F +D +G+ IDL
Sbjct: 4708 SLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDL 4755
>PCLO_MOUSE (Q9QYX7) Piccolo protein (Presynaptic cytomatrix protein)
(Aczonin) (Brain-derived HLMN protein)
Length = 5038
Score = 47.8 bits (112), Expect = 1e-05
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 18/108 (16%)
Query: 3 NNVLGLLKLRIKRGINLAIRDSNS-SDPYVVV-------------NIGHEQKLKTRVVKN 48
N LG L + I + NL RD+N SDP+V V N E K +T+ V+
Sbjct: 4601 NYDLGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASVEYKRRTKYVQK 4660
Query: 49 NCNPEWNEEL---TLSIRD-VRVPICLTVFDKDTFFVDDKMGDAEIDL 92
+ NPEWN+ + ++S+ ++ + +TV+D D F +D +G+ IDL
Sbjct: 4661 SLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDL 4708
>SYT7_HUMAN (O43581) Synaptotagmin-7 (Synaptotagmin VII) (SytVII)
Length = 402
Score = 45.8 bits (107), Expect = 5e-05
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 9 LKLRIKRGINLAIRD-SNSSDPYVVVNI--GHEQKLKTRVVKNNCNPEWNEELTLS---- 61
L L+I + L +D S +SDP+V + + + KLKT+V + N NP WNE
Sbjct: 151 LTLKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLKTKVKRKNLNPHWNETFLFEGFPY 210
Query: 62 IRDVRVPICLTVFDKDTFFVDDKMGDAEIDL 92
+ V+ + L V D D F +D +G+ I L
Sbjct: 211 EKVVQRILYLQVLDYDRFSRNDPIGEVSIPL 241
Score = 39.3 bits (90), Expect = 0.005
Identities = 27/96 (28%), Positives = 48/96 (49%), Gaps = 11/96 (11%)
Query: 5 VLGLLKLRIKRGINLAIRDSNSSDPYVVVNIGHE----QKLKTRVVKNNCNPEWNEELTL 60
++ ++K R + +++ +SDPYV V + ++ +K KT +K N NP +NE
Sbjct: 283 IVNIIKARNLKAMDIG----GTSDPYVKVWLMYKDKRVEKKKTVTMKRNLNPNFNESFAF 338
Query: 61 SIRDVRV---PICLTVFDKDTFFVDDKMGDAEIDLK 93
I ++ I +TV DKD +D +G + K
Sbjct: 339 DIPTEKLRETTIIITVMDKDKLSRNDVIGKIYLSWK 374
>RSG5_HUMAN (O43374) Ras GTPase-activating protein 4
(RasGAP-activating-like protein 2) (Calcium-promoted
Ras inactivator)
Length = 803
Score = 45.8 bits (107), Expect = 5e-05
Identities = 26/79 (32%), Positives = 39/79 (48%), Gaps = 1/79 (1%)
Query: 9 LKLRIKRGINLAIRD-SNSSDPYVVVNIGHEQKLKTRVVKNNCNPEWNEELTLSIRDVRV 67
L +RI G NL +D + SSDPY +V + +E ++T V P W EE + +
Sbjct: 7 LYIRIVEGKNLPAKDITGSSDPYCIVKVDNEPIIRTATVWKTLCPFWGEEYQVHLPPTFH 66
Query: 68 PICLTVFDKDTFFVDDKMG 86
+ V D+D DD +G
Sbjct: 67 AVAFYVMDEDALSRDDVIG 85
Score = 41.2 bits (95), Expect = 0.001
Identities = 25/87 (28%), Positives = 45/87 (50%), Gaps = 3/87 (3%)
Query: 9 LKLRIKRGINLAIRDSN-SSDPYVVVNIGHEQKLKTRVVKNNCNPEWNEELTLSIRD-VR 66
L+ + +LA +D N +SDP+V V + +T +VK +C P WNE +++
Sbjct: 135 LRCSVLEARDLAPKDRNGTSDPFVRVRYKGRTR-ETSIVKKSCYPRWNETFEFELQEGAM 193
Query: 67 VPICLTVFDKDTFFVDDKMGDAEIDLK 93
+C+ +D D +D +G ID++
Sbjct: 194 EALCVEAWDWDLVSRNDFLGKVVIDVQ 220
>KPC1_APLCA (Q16974) Calcium-dependent protein kinase C (EC 2.7.1.-)
(APL I)
Length = 649
Score = 45.4 bits (106), Expect = 6e-05
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 18 NLAIRDSNS-SDPYVVVNI----GHEQKLKTRVVKNNCNPEWNEELTLSI--RDVRVPIC 70
NL D N +DPYV V + H+ KLKT+ +K + NP WNE T+ I D +
Sbjct: 166 NLCPMDPNGLADPYVKVKLIPYDAHKLKLKTKTIKASLNPVWNESFTVDIGPEDNSKRLS 225
Query: 71 LTVFDKDTFFVDDKMG 86
L V+D D +D MG
Sbjct: 226 LEVWDWDRTSRNDFMG 241
>DO2B_MOUSE (P70169) Double C2-like domain containing protein beta
(Doc2 beta)
Length = 412
Score = 45.1 bits (105), Expect = 8e-05
Identities = 31/94 (32%), Positives = 49/94 (51%), Gaps = 9/94 (9%)
Query: 9 LKLRIKRGINLAIRDSNS-SDPYVVVNI----GHEQKLKTRVVKNNCNPEWNEELT-LSI 62
L I + L D N +DPYV +++ KL+T+ ++N NP WNE LT I
Sbjct: 143 LHCTISKAKGLKPMDHNGLADPYVKLHLLPGASKANKLRTKTLRNTLNPSWNETLTYYGI 202
Query: 63 RD---VRVPICLTVFDKDTFFVDDKMGDAEIDLK 93
D VR + ++V D+D F ++ +G+ + LK
Sbjct: 203 TDEDMVRKTLRISVCDEDKFRHNEFIGETRVPLK 236
Score = 41.2 bits (95), Expect = 0.001
Identities = 34/108 (31%), Positives = 52/108 (47%), Gaps = 8/108 (7%)
Query: 9 LKLRIKRGINLAIRDSNS-SDPYVVV----NIGHEQKLKTRVVKNNCNPEWNEELTLSIR 63
L + I R +LA D+N SDPYV ++ + K KT V K NPE+NEE I+
Sbjct: 283 LLVGIVRCAHLAAMDANGYSDPYVKTYLKPDVDKKSKHKTAVKKKTLNPEFNEEFCYEIK 342
Query: 64 D---VRVPICLTVFDKDTFFVDDKMGDAEIDLKPYTQCVKMKLDTLPN 108
+ + +TV+D D +D +G + + + +K D L N
Sbjct: 343 HGDLAKKTLEVTVWDYDIGKSNDFIGGVVLGINAKGERLKHWFDCLNN 390
>DO2B_HUMAN (Q14184) Double C2-like domain containing protein beta
(Doc2 beta)
Length = 412
Score = 45.1 bits (105), Expect = 8e-05
Identities = 42/154 (27%), Positives = 74/154 (47%), Gaps = 20/154 (12%)
Query: 9 LKLRIKRGINLAIRDSNS-SDPYVVVNI----GHEQKLKTRVVKNNCNPEWNEELT-LSI 62
L I + L D N +DPYV +++ KL+T+ ++N NP WNE LT I
Sbjct: 143 LHCTITKAKGLKPMDHNGLADPYVKLHLLPGASKANKLRTKTLRNTLNPTWNETLTYYGI 202
Query: 63 RD---VRVPICLTVFDKDTFFVDDKMGDAEIDLKPYTQCVKMKLDTLPNGCAIKRVQANR 119
D +R + ++V D+D F ++ +G+ + LK +K N C K++ ++
Sbjct: 203 TDEDMIRKTLRISVCDEDKFRHNEFIGETRVPLKK----LKPNHTKTFNICLEKQLPVDK 258
Query: 120 TNCLAEESSCIWKNGKVLQEMILRLRNVESGELV 153
T E + + G++L + L+ + + G LV
Sbjct: 259 T-----EDKSLEERGRIL--ISLKYSSQKQGLLV 285
Score = 41.2 bits (95), Expect = 0.001
Identities = 34/108 (31%), Positives = 52/108 (47%), Gaps = 8/108 (7%)
Query: 9 LKLRIKRGINLAIRDSNS-SDPYVVV----NIGHEQKLKTRVVKNNCNPEWNEELTLSIR 63
L + I R +LA D+N SDPYV ++ + K KT V K NPE+NEE I+
Sbjct: 283 LLVGIVRCAHLAAMDANGYSDPYVKTYLRPDVDKKSKHKTAVKKKTLNPEFNEEFCYEIK 342
Query: 64 D---VRVPICLTVFDKDTFFVDDKMGDAEIDLKPYTQCVKMKLDTLPN 108
+ + +TV+D D +D +G + + + +K D L N
Sbjct: 343 HGDLAKKSLEVTVWDYDIGKSNDFIGGVVLGIHAKGERLKHWFDCLKN 390
>DO2B_RAT (P70610) Double C2-like domain containing protein beta
(Doc2 beta)
Length = 412
Score = 44.7 bits (104), Expect = 1e-04
Identities = 30/94 (31%), Positives = 49/94 (51%), Gaps = 9/94 (9%)
Query: 9 LKLRIKRGINLAIRDSNS-SDPYVVVNI----GHEQKLKTRVVKNNCNPEWNEELT-LSI 62
L I + L D N +DPYV +++ KL+T+ ++N NP WNE LT I
Sbjct: 143 LHCTISKAKGLKPMDHNGLADPYVKLHLLPGASKANKLRTKTLRNTLNPSWNETLTYYGI 202
Query: 63 RD---VRVPICLTVFDKDTFFVDDKMGDAEIDLK 93
D +R + ++V D+D F ++ +G+ + LK
Sbjct: 203 TDEDMIRKTLRISVCDEDKFRHNEFIGETRVPLK 236
Score = 41.6 bits (96), Expect = 0.001
Identities = 34/108 (31%), Positives = 52/108 (47%), Gaps = 8/108 (7%)
Query: 9 LKLRIKRGINLAIRDSNS-SDPYVVV----NIGHEQKLKTRVVKNNCNPEWNEELTLSIR 63
L + I R +LA D+N SDPYV ++ + K KT V K NPE+NEE I+
Sbjct: 283 LLVGIVRCAHLAAMDANGYSDPYVKTYLKPDVDKKSKHKTAVKKKTLNPEFNEEFCYEIK 342
Query: 64 D---VRVPICLTVFDKDTFFVDDKMGDAEIDLKPYTQCVKMKLDTLPN 108
+ + +TV+D D +D +G + + + +K D L N
Sbjct: 343 HGDLAKKTLEVTVWDYDIGKSNDFIGGVVLGINAKGERLKHWFDCLKN 390
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.320 0.138 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,481,271
Number of Sequences: 164201
Number of extensions: 794711
Number of successful extensions: 1884
Number of sequences better than 10.0: 156
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 89
Number of HSP's that attempted gapping in prelim test: 1716
Number of HSP's gapped (non-prelim): 231
length of query: 172
length of database: 59,974,054
effective HSP length: 102
effective length of query: 70
effective length of database: 43,225,552
effective search space: 3025788640
effective search space used: 3025788640
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Medicago: description of AC146775.16