BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146760.13 + phase: 0 /pseudo/partial
(612 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
PL10_MOUSE (P16381) Putative ATP-dependent RNA helicase PL10 587 e-167
DDXY_PANTR (Q6GVM6) DEAD-box protein 3, Y-chromosomal 586 e-167
DDX3_MOUSE (Q62167) DEAD-box protein 3 (DEAD-box RNA helicase DE... 580 e-165
DDX3_HUMAN (O00571) DEAD-box protein 3 (Helicase-like protein 2)... 580 e-165
DDXY_HUMAN (O15523) DEAD-box protein 3, Y-chromosomal 579 e-165
AN3_XENLA (P24346) Putative ATP-dependent RNA helicase An3 569 e-162
DED1_YEAST (P06634) Probable ATP-dependent RNA helicase DED1 539 e-153
DED1_SCHPO (O13370) ATP-dependent RNA helicase ded1 525 e-148
DBP1_YEAST (P24784) Probable ATP-dependent RNA helicase DBP1 (He... 522 e-147
DDX4_HUMAN (Q9NQI0) DEAD-box protein 4 (VASA homolog) 408 e-113
DDX4_PIG (Q6GWX0) DEAD-box protein 4 (VASA homolog) (VASA-like p... 407 e-113
DDX4_MOUSE (Q61496) DEAD-box protein 4 (VASA homolog) (Mvh) 404 e-112
DDX4_RAT (Q64060) DEAD-box protein 4 (VASA homolog) (rVLG) 399 e-110
VASA_DROME (P09052) Vasa protein (Antigen Mab46F11) 390 e-108
RM62_DROME (P19109) ATP-dependent RNA helicase P62 375 e-103
DBP2_YEAST (P24783) P68-like protein 375 e-103
DBP2_SCHPO (P24782) P68-like protein 372 e-102
DD17_HUMAN (Q92841) Probable RNA-dependent helicase p72 (DEAD-bo... 343 8e-94
DB10_NICSY (P46942) RNA helicase-like protein DB10 339 1e-92
DDX5_MOUSE (Q61656) Probable RNA-dependent helicase p68 (DEAD-bo... 331 4e-90
>PL10_MOUSE (P16381) Putative ATP-dependent RNA helicase PL10
Length = 660
Score = 587 bits (1513), Expect = e-167
Identities = 331/630 (52%), Positives = 408/630 (64%), Gaps = 72/630 (11%)
Query: 39 YVPPHLRNRGPSAPAPAAPAF-DNSGSRWAPPP--------RNDYR---------GGGGG 80
Y+PPHLRNR AA AF D GSRW+ R+D R GG G
Sbjct: 38 YIPPHLRNR------EAAKAFYDKDGSRWSKDKDAYSSFGSRSDTRAKSSFFSDRGGSGS 91
Query: 81 RGG------------GGYGNRGGGGWDRREANPF----ADQDDSEEPVTQEEQ------- 117
RG G G R G G R N AD+DD +P+ E+
Sbjct: 92 RGRFDERGRSDYESVGSRGGRSGFGKFERGGNSRWCDKADEDDWSKPLPPSERLEQELFS 151
Query: 118 -ENTGINFDAYEDIPVETSGGNVPPPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRHAIP 176
NTGINF+ Y+DIPVE +G N PP + +F+++++GE + NI +Y +PTPVQ+HAIP
Sbjct: 152 GGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIP 211
Query: 177 ISLGGRDLMACAQTGSGKTAAFCFPIISGIMTGQPAQ-------RPPRGVRTVCPLALVL 229
I RDLMACAQTGSGKTAAF PI+S I T P + G R P++LVL
Sbjct: 212 IIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALRAMKENGKYGRRKQYPISLVL 271
Query: 230 SPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 289
+PTREL++QI+EEARKFSY++ VR V YGGA I QQ+R+LERG +LVATPGRLVD++E
Sbjct: 272 APTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMME 331
Query: 290 RARVSLSMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPAGVRQTMLFSATFPKEIQRL 349
R ++ L +YL LDEADRMLDMGFEPQIR+IVEQ MPP GVR TM+FSATFPKEIQ L
Sbjct: 332 RGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQML 391
Query: 350 ASDFLSNYIFLAVGRVGSSTDLIDQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLV 409
A DFL YIFLAVGRVGS+++ I Q+V +V+E+DKRS L+DLL+A GK +L LV
Sbjct: 392 ARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNA------TGKDSLILV 445
Query: 410 FVETKKGADALEHWLCLNNFPATTIHGDRSQQEREAALRSFKSGNTPILVATDVAARGLD 469
FVETKKGAD+LE +L + T+IHGDRSQ++RE AL F+SG +PILVAT VAARGLD
Sbjct: 446 FVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLD 505
Query: 470 IPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNENNTSMARSLQDLMQEANQE 529
I +V HV+NFDLP+DI++YVHRIGRTGR G GLAT+FFNE N ++ + L DL+ EA QE
Sbjct: 506 ISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQE 565
Query: 530 VPAWLSRFAARSSFGGGKNRRSG---GGRFGGRDFRREGSFSRGGSDYHGAGNS---GGG 583
VP+WL A + GG RS G FG RD+R+ S A NS GG
Sbjct: 566 VPSWLENMAFEHHYKGGSRGRSKSRFSGGFGARDYRQSSGASSSSFSSGRASNSRSGGGS 625
Query: 584 YGASGGYGGGGYGG-----GYAGNSAGPXV 608
+G+S G+GGG YGG GY GN + V
Sbjct: 626 HGSSRGFGGGSYGGFYNSDGYGGNYSSQGV 655
>DDXY_PANTR (Q6GVM6) DEAD-box protein 3, Y-chromosomal
Length = 660
Score = 586 bits (1511), Expect = e-167
Identities = 327/618 (52%), Positives = 404/618 (64%), Gaps = 60/618 (9%)
Query: 39 YVPPHLRNRGPSA--------------PAPAAPAFDNSGSRWAPPPRNDYRGGGGGRGGG 84
Y+PPHLRNR S A +F + SR P ++ G GR
Sbjct: 38 YIPPHLRNREASKGFHDKDSSGWSCSKDKDAYNSFGSRDSRGKPGYFSERGSGSRGRFDD 97
Query: 85 -------GYGNRGGGGWDRREANPFA------DQDDSEEPVTQEEQ--------ENTGIN 123
G GNR G+ R E N + D+DD +P+ E+ NTGIN
Sbjct: 98 RGRSDYDGIGNRDRPGFGRFERNGHSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGIN 157
Query: 124 FDAYEDIPVETSGGNVPPPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRHAIPISLGGRD 183
F+ Y+DIPVE +G N PP + F +ID+GE + NI+ +Y +PTPVQ+HAIPI G RD
Sbjct: 158 FEKYDDIPVEATGSNCPPHIENFGDIDMGEIIMGNIQLTRYTRPTPVQKHAIPIIKGKRD 217
Query: 184 LMACAQTGSGKTAAFCFPIISGIMTGQPAQRPPR-------GVRTVCPLALVLSPTRELS 236
LMACAQTGSGKTAAF PI+S I T P + G R P++LVL+PTREL+
Sbjct: 218 LMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELA 277
Query: 237 MQIHEEARKFSYQTGVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLS 296
+QI+EEARKFSY++ VR V YGGA I QQ+R+LERG +LVATPGRLVD++ER ++ L
Sbjct: 278 VQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLD 337
Query: 297 MIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPAGVRQTMLFSATFPKEIQRLASDFLSN 356
+YL LDEADRMLDMGFEPQIR+IVEQ MPP GVR TM+FSATFPKEIQ LA DFL
Sbjct: 338 FCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDE 397
Query: 357 YIFLAVGRVGSSTDLIDQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVETKKG 416
YIFLAVGRVGS+++ I Q+V +V++ DKRS L+D+L G G +LTLVFVETKKG
Sbjct: 398 YIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDIL------GAAGTDSLTLVFVETKKG 451
Query: 417 ADALEHWLCLNNFPATTIHGDRSQQEREAALRSFKSGNTPILVATDVAARGLDIPHVAHV 476
AD+LE +L + T+IHGDRSQ++RE AL F+SG +PILVAT VAARGLDI +V HV
Sbjct: 452 ADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHV 511
Query: 477 VNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNENNTSMARSLQDLMQEANQEVPAWLSR 536
+NFDLP+DI++YVHRIGRTGR G GLAT+FFNE N ++ + L DL+ EA QEVP+WL
Sbjct: 512 INFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNINITKDLLDLLVEAKQEVPSWLEN 571
Query: 537 FAARSSFGGGKNRRSGGGR----FGGRDFRR-EGSFSRGGSDYHGAG--NSGGGYGASGG 589
A + GG RS R FG RD+R+ GS S G G+ + GGGYG S G
Sbjct: 572 MAYEHQYKGGSRGRSKSNRFSGGFGARDYRQSSGSSSSGFGASRGSSSRSGGGGYGNSRG 631
Query: 590 YGGGGYGG-----GYAGN 602
+GGGGYGG GY GN
Sbjct: 632 FGGGGYGGFYNSDGYGGN 649
>DDX3_MOUSE (Q62167) DEAD-box protein 3 (DEAD-box RNA helicase
DEAD3) (mDEAD3) (Embryonic RNA helicase) (D1PAS1 related
sequence 2)
Length = 661
Score = 580 bits (1496), Expect = e-165
Identities = 325/621 (52%), Positives = 408/621 (65%), Gaps = 64/621 (10%)
Query: 39 YVPPHLRNRGPS-----------APAPAAPAFDNSGSRWAPPPRNDYRG--GGGGRGG-- 83
Y+PPHLRNR + + + A+ + GSR ++ + G G G RG
Sbjct: 37 YIPPHLRNREATKGFYDKDSSGWSSSKDKDAYSSFGSRGDSRGKSSFFGDRGSGSRGRFD 96
Query: 84 ----------GGYGNRGGGGWDRREAN----PFADQDDSEEPVTQEEQ--------ENTG 121
GG G+R G G R N +D+DD +P+ E+ NTG
Sbjct: 97 DRGRGDYDGIGGRGDRSGFGKFERGGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTG 156
Query: 122 INFDAYEDIPVETSGGNVPPPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRHAIPISLGG 181
INF+ Y+DIPVE +G N PP + +F+++++GE + NI +Y +PTPVQ+HAIPI
Sbjct: 157 INFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEK 216
Query: 182 RDLMACAQTGSGKTAAFCFPIISGIMTGQPA-------QRPPRGVRTVCPLALVLSPTRE 234
RDLMACAQTGSGKTAAF PI+S I P + G R P++LVL+PTRE
Sbjct: 217 RDLMACAQTGSGKTAAFLLPILSQIYADGPGEALRAMKENGRYGRRKQYPISLVLAPTRE 276
Query: 235 LSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVS 294
L++QI+EEARKFSY++ VR V YGGA I QQ+R+LERG +LVATPGRLVD++ER ++
Sbjct: 277 LAVQIYEEARKFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVATPGRLVDMMERGKIG 336
Query: 295 LSMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPAGVRQTMLFSATFPKEIQRLASDFL 354
L +YL LDEADRMLDMGFEPQIR+IVEQ MPP GVR TM+FSATFPKEIQ LA DFL
Sbjct: 337 LDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFL 396
Query: 355 SNYIFLAVGRVGSSTDLIDQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVETK 414
YIFLAVGRVGS+++ I Q+V +V+E DKRS L+DLL+A GK +LTLVFVETK
Sbjct: 397 DEYIFLAVGRVGSTSENITQKVVWVEEIDKRSFLLDLLNA------TGKDSLTLVFVETK 450
Query: 415 KGADALEHWLCLNNFPATTIHGDRSQQEREAALRSFKSGNTPILVATDVAARGLDIPHVA 474
KGAD+LE +L + T+IHGDRSQ++RE AL F+SG +PILVAT VAARGLDI +V
Sbjct: 451 KGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVK 510
Query: 475 HVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNENNTSMARSLQDLMQEANQEVPAWL 534
HV+NFDLP+DI++YVHRIGRTGR G GLAT+FFNE N ++ + L DL+ EA QEVP+WL
Sbjct: 511 HVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWL 570
Query: 535 SRFAAR-----SSFGGGKNRRSGGGRFGGRDFRREGSFSRGGSDYHGAGNS---GGGYGA 586
A SS G K+ R GG FG RD+R+ S A +S GGG+G
Sbjct: 571 ENMAFEHHYKGSSRGRSKSSRFSGG-FGARDYRQSSGASSSSFSSSRASSSRSGGGGHGG 629
Query: 587 SGGYGGGGYGG-----GYAGN 602
S G+GGGGYGG GY GN
Sbjct: 630 SRGFGGGGYGGFYNSDGYGGN 650
>DDX3_HUMAN (O00571) DEAD-box protein 3 (Helicase-like protein 2)
(HLP2) (DEAD-box, X isoform)
Length = 661
Score = 580 bits (1496), Expect = e-165
Identities = 327/626 (52%), Positives = 407/626 (64%), Gaps = 74/626 (11%)
Query: 39 YVPPHLRNRGPSAPAPAAPAFDNSGSRWAPP----------PRNDYRG--------GGGG 80
Y+PPHLRNR +D S W+ R+D RG G G
Sbjct: 37 YIPPHLRNR-----EATKGFYDKDSSGWSSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGS 91
Query: 81 RGG------------GGYGNRGGGGWDRREAN----PFADQDDSEEPVTQEEQ------- 117
RG G G+R G G R N +D+DD +P+ E+
Sbjct: 92 RGRFDDRGRSDYDGIGSRGDRSGFGKFERGGNSRWCDKSDEDDWSKPLPPSERLEQELFS 151
Query: 118 -ENTGINFDAYEDIPVETSGGNVPPPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRHAIP 176
NTGINF+ Y+DIPVE +G N PP + +F+++++GE + NI +Y +PTPVQ+HAIP
Sbjct: 152 GGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIP 211
Query: 177 ISLGGRDLMACAQTGSGKTAAFCFPIISGIMTGQPA-------QRPPRGVRTVCPLALVL 229
I RDLMACAQTGSGKTAAF PI+S I + P + G R P++LVL
Sbjct: 212 IIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVL 271
Query: 230 SPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 289
+PTREL++QI+EEARKFSY++ VR V YGGA I QQ+R+LERG +LVATPGRLVD++E
Sbjct: 272 APTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMME 331
Query: 290 RARVSLSMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPAGVRQTMLFSATFPKEIQRL 349
R ++ L +YL LDEADRMLDMGFEPQIR+IVEQ MPP GVR TM+FSATFPKEIQ L
Sbjct: 332 RGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQML 391
Query: 350 ASDFLSNYIFLAVGRVGSSTDLIDQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLV 409
A DFL YIFLAVGRVGS+++ I Q+V +V+ESDKRS L+DLL+A GK +LTLV
Sbjct: 392 ARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNA------TGKDSLTLV 445
Query: 410 FVETKKGADALEHWLCLNNFPATTIHGDRSQQEREAALRSFKSGNTPILVATDVAARGLD 469
FVETKKGAD+LE +L + T+IHGDRSQ++RE AL F+SG +PILVAT VAARGLD
Sbjct: 446 FVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLD 505
Query: 470 IPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNENNTSMARSLQDLMQEANQE 529
I +V HV+NFDLP+DI++YVHRIGRTGR G GLAT+FFNE N ++ + L DL+ EA QE
Sbjct: 506 ISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQE 565
Query: 530 VPAWLSRFAAR-----SSFGGGKNRRSGGGRFGGRDFRREGSFSRGGSDYHGAGNS---G 581
VP+WL A SS G K+ R GG FG RD+R+ S A +S G
Sbjct: 566 VPSWLENMAYEHHYKGSSRGRSKSSRFSGG-FGARDYRQSSGASSSSFSSSRASSSRSGG 624
Query: 582 GGYGASGGYGGGGYGG-----GYAGN 602
GG+G+S G+GGGGYGG GY GN
Sbjct: 625 GGHGSSRGFGGGGYGGFYNSDGYGGN 650
>DDXY_HUMAN (O15523) DEAD-box protein 3, Y-chromosomal
Length = 660
Score = 579 bits (1493), Expect = e-165
Identities = 324/618 (52%), Positives = 405/618 (65%), Gaps = 60/618 (9%)
Query: 39 YVPPHLRNRGPSA--------------PAPAAPAFDNSGSRWAPPPRNDYRGGGGGRGGG 84
Y+PPHLRN+ S A +F + SR P ++ G GR
Sbjct: 38 YIPPHLRNKEASKGFHDKDSSGWSCSKDKDAYSSFGSRDSRGKPGYFSERGSGSRGRFDD 97
Query: 85 -------GYGNR---GGGGWDRREANPFAD---QDDSEEPVTQEEQ--------ENTGIN 123
G GNR G G ++R + + D +DD +P+ E+ NTGIN
Sbjct: 98 RGRSDYDGIGNRERPGFGRFERSGHSRWCDKSVEDDWSKPLPPSERLEQELFSGGNTGIN 157
Query: 124 FDAYEDIPVETSGGNVPPPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRHAIPISLGGRD 183
F+ Y+DIPVE +G N PP + F++ID+GE + NI +Y +PTPVQ+HAIPI G RD
Sbjct: 158 FEKYDDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRD 217
Query: 184 LMACAQTGSGKTAAFCFPIISGIMTGQPAQRPPR-------GVRTVCPLALVLSPTRELS 236
L+ACAQTGSGKTAAF PI+S I T P + G R P++LVL+PTREL+
Sbjct: 218 LVACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELA 277
Query: 237 MQIHEEARKFSYQTGVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLS 296
+QI+EEARKFSY++ VR V YGGA I QQ+R+LERG +LVATPGRLVD++ER ++ L
Sbjct: 278 VQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLD 337
Query: 297 MIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPAGVRQTMLFSATFPKEIQRLASDFLSN 356
+YL LDEADRMLDMGFEPQIR+IVEQ MPP GVR TM+FSATFPKEIQ LA DFL
Sbjct: 338 FCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDE 397
Query: 357 YIFLAVGRVGSSTDLIDQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVETKKG 416
YIFLAVGRVGS+++ I Q+V +V++ DKRS L+D+L G G +LTLVFVETKKG
Sbjct: 398 YIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDIL------GATGSDSLTLVFVETKKG 451
Query: 417 ADALEHWLCLNNFPATTIHGDRSQQEREAALRSFKSGNTPILVATDVAARGLDIPHVAHV 476
AD+LE +L + T+IHGDRSQ++RE AL F+SG +PILVAT VAARGLDI +V HV
Sbjct: 452 ADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHV 511
Query: 477 VNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNENNTSMARSLQDLMQEANQEVPAWLSR 536
+NFDLP+DI++YVHRIGRTGR G GLAT+FFNE N ++ + L DL+ EA QEVP+WL
Sbjct: 512 INFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQEVPSWLEN 571
Query: 537 FAARSSFGGGKNRRSGGGR----FGGRDFRR-EGSFSRGGSDYHGAG--NSGGGYGASGG 589
A + GG RS R FG RD+R+ GS S G G+ + GGGYG S G
Sbjct: 572 MAYEHHYKGGSRGRSKSNRFSGGFGARDYRQSSGSSSSGFGASRGSSSRSGGGGYGDSRG 631
Query: 590 YGGGGYGG-----GYAGN 602
+GGGGYGG GY GN
Sbjct: 632 FGGGGYGGFYNSDGYGGN 649
>AN3_XENLA (P24346) Putative ATP-dependent RNA helicase An3
Length = 697
Score = 569 bits (1466), Expect = e-162
Identities = 320/573 (55%), Positives = 393/573 (67%), Gaps = 45/573 (7%)
Query: 62 SGSRWAPPPRNDYRGGGGGRG---GGGYGNRGGGGWDRREANPFADQDDSEEPVTQE--- 115
SGSR R D G G R G G +RG W ++ D+DD +P+
Sbjct: 132 SGSRRTDDRRQDGFDGMGNRSDKSGFGRFDRGNSRW----SDDRNDEDDWSKPLAPNDRV 187
Query: 116 EQE-----NTGINFDAYEDIPVETSGGNVPPPVNTFAEIDLGEALNQNIRRCKYVKPTPV 170
EQE NTGINF+ Y+DIPVE +G N PP + +F ++ +GE + NI+ +Y +PTPV
Sbjct: 188 EQELFSGSNTGINFEKYDDIPVEATGSNCPPHIESFHDVTMGEIIMGNIQLTRYTRPTPV 247
Query: 171 QRHAIPISLGGRDLMACAQTGSGKTAAFCFPIISGIMTGQPAQRPPR-------GVRTVC 223
Q+HAIPI + RDLMACAQTGSGKTAAF PI+S I P G R
Sbjct: 248 QKHAIPIIIEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGDAMKHLQENGRYGRRKQF 307
Query: 224 PLALVLSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRELERGVDILVATPGR 283
PL+LVL+PTREL++QI+EEARKF+Y++ VR V YGGA I QQ+R+LERG +LVATPGR
Sbjct: 308 PLSLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 367
Query: 284 LVDLLERARVSLSMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPAGVRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IVEQ MPP GVRQTM+FSATFP
Sbjct: 368 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRQTMMFSATFP 427
Query: 344 KEIQRLASDFLSNYIFLAVGRVGSSTDLIDQRVEYVQESDKRSHLMDLLHAQRANGVQGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V+E DKRS L+DLL+A GK
Sbjct: 428 KEIQILARDFLDEYIFLAVGRVGSTSENITQKVVWVEEMDKRSFLLDLLNA------TGK 481
Query: 404 QALTLVFVETKKGADALEHWLCLNNFPATTIHGDRSQQEREAALRSFKSGNTPILVATDV 463
+LTLVFVETKKGADALE +L + T+IHGDRSQ++RE AL F+SG +PILVAT V
Sbjct: 482 DSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 541
Query: 464 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNENNTSMARSLQDLM 523
AARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G GLAT+FFNE N ++ + L DL+
Sbjct: 542 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNINITKDLLDLL 601
Query: 524 QEANQEVPAWLSRFA-----ARSSFGGGKNRRSGGGRFGGRDFRRE----GSF--SRGG- 571
EA QEVP+WL A SS G K+R SGG FG +D+R+ SF SRGG
Sbjct: 602 VEAKQEVPSWLENMAYEQHHKSSSRGRSKSRFSGG--FGAKDYRQSSGAGSSFGSSRGGR 659
Query: 572 -SDYHGAGNSGGGYGASGGYGGGGYGGGYAGNS 603
S + G+ GGGYG G Y GYGG Y G+S
Sbjct: 660 SSGHGGSRGFGGGYG--GFYNSDGYGGNYGGSS 690
Score = 39.3 bits (90), Expect = 0.030
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Query: 25 AAAVANNAANTRPVYVPPHLRNRGPSAPAPAAPAFDNSGSRWAPPPRNDYRGGGGGRGGG 84
+A + A T+ Y+PPHLRN+ S + G+ + ++D G G G
Sbjct: 23 SADAESGVAGTKGRYIPPHLRNKEASRNDSNWDS-GRGGNGYINGMQDDRDGRMNGYDRG 81
Query: 85 GYGNRGGGGWDRREANPFADQDDSEEPVTQEEQENTGINFDAY 127
GYG+RG G DR F D+++S N+G + DAY
Sbjct: 82 GYGSRGTGRSDR----GFYDRENS--------GWNSGRDKDAY 112
>DED1_YEAST (P06634) Probable ATP-dependent RNA helicase DED1
Length = 604
Score = 539 bits (1388), Expect = e-153
Identities = 298/606 (49%), Positives = 392/606 (64%), Gaps = 44/606 (7%)
Query: 34 NTRPVYVPPHLRNRGPSAPAPAAPAFDNSGSRWAPPPRNDYRGGG--------GGRGGGG 85
N YVPPHLR + SA ++ +N+G N RGGG GG G GG
Sbjct: 16 NNENGYVPPHLRGKPRSARNNSSNYNNNNGGY------NGGRGGGSFFSNNRRGGYGNGG 69
Query: 86 Y--GNRGGGGWDRREANPFADQDDSEEPVTQEEQ------------ENTGINFDAYEDIP 131
+ GN GG + R + D P ++ + +++GINFD Y+DIP
Sbjct: 70 FFGGNNGGSRSNGRSGGRWIDGKHVPAPRNEKAEIAIFGVPEDPNFQSSGINFDNYDDIP 129
Query: 132 VETSGGNVPPPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRHAIPISLGGRDLMACAQTG 191
V+ SG +VP P+ F L L +NI+ ++ KPTPVQ++++PI GRDLMACAQTG
Sbjct: 130 VDASGKDVPEPITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPIVANGRDLMACAQTG 189
Query: 192 SGKTAAFCFPIIS-GIMTGQPAQRPPRGV---RTVCPLALVLSPTRELSMQIHEEARKFS 247
SGKT F FP++S TG Q +G R P A++++PTREL+ QI +EA+KF+
Sbjct: 190 SGKTGGFLFPVLSESFKTGPSPQPESQGSFYQRKAYPTAVIMAPTRELATQIFDEAKKFT 249
Query: 248 YQTGVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLSMIRYLALDEAD 307
Y++ V+ V YGG+PI QLRE+ERG D+LVATPGRL DLLER ++SL+ ++YL LDEAD
Sbjct: 250 YRSWVKACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGKISLANVKYLVLDEAD 309
Query: 308 RMLDMGFEPQIRKIVEQMDMPPAGVRQTMLFSATFPKEIQRLASDFLSNYIFLAVGRVGS 367
RMLDMGFEPQIR IVE DM P G RQT++FSATFP +IQ LA DFLS+YIFL+VGRVGS
Sbjct: 310 RMLDMGFEPQIRHIVEDCDMTPVGERQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGS 369
Query: 368 STDLIDQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADALEHWLCLN 427
+++ I Q+V YV+ DK+S L+DLL A LTL+FVETK+ AD L +L +
Sbjct: 370 TSENITQKVLYVENQDKKSALLDLLSA-------STDGLTLIFVETKRMADQLTDFLIMQ 422
Query: 428 NFPATTIHGDRSQQEREAALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDD 487
NF AT IHGDR+Q ERE AL +F+SG +LVAT VAARGLDIP+V HV+N+DLP+D+DD
Sbjct: 423 NFRATAIHGDRTQSERERALAAFRSGAATLLVATAVAARGLDIPNVTHVINYDLPSDVDD 482
Query: 488 YVHRIGRTGRAGKKGLATAFFNENNTSMARSLQDLMQEANQEVPAWLSRFAARSSFGGGK 547
YVHRIGRTGRAG GLATAFFN N+++ + L +++ EANQEVP++L + A S+ G
Sbjct: 483 YVHRIGRTGRAGNTGLATAFFNSENSNIVKGLHEILTEANQEVPSFL-KDAMMSAPGSRS 541
Query: 548 NRRSGG-GRFGGRDFRREGSFSRGGSDYHGAGNSGGGYGASGGYGGGGYGGGYAGNSAGP 606
N R GG GR RD+R+ G S GG + + + + G+G G+ GNS G
Sbjct: 542 NSRRGGFGRNNNRDYRKAGGASAGG--WGSSRSRDNSFRGGSGWGSDSKSSGW-GNSGGS 598
Query: 607 XVTTAW 612
++ W
Sbjct: 599 NNSSWW 604
>DED1_SCHPO (O13370) ATP-dependent RNA helicase ded1
Length = 636
Score = 525 bits (1352), Expect = e-148
Identities = 299/601 (49%), Positives = 382/601 (62%), Gaps = 57/601 (9%)
Query: 39 YVPPHLRNRGPSAPAPAA---PAFDNSGSRWAPPP------------------------- 70
Y+PP R++ + APA + + GS + P
Sbjct: 30 YIPPFARDKPSAGAAPAVGDDESVSSRGSSRSQTPSEFSSNYGGRREYNRGGHYGGGEGR 89
Query: 71 RNDYRGG--GGGRGGGGYGNRGGGGWDRREANPFADQDDSEE-----PVTQEEQENTGIN 123
+N+YRGG GG GGGY N G G R + ++ E V + +TGIN
Sbjct: 90 QNNYRGGREGGYSNGGGYRNNRGFGQWRDGQHVIGARNTLLERQLFGAVADGTKVSTGIN 149
Query: 124 FDAYEDIPVETSGGNVPPPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRHAIPISLGGRD 183
F+ Y+DIPVE SGG++ P VN F L L QNI+ Y +PTPVQ+++IPI GRD
Sbjct: 150 FEKYDDIPVEVSGGDIEP-VNEFTSPPLNSHLLQNIKLSGYTQPTPVQKNSIPIVTSGRD 208
Query: 184 LMACAQTGSGKTAAFCFPIISGIMTGQPAQRP---PRGV----RTVCPLALVLSPTRELS 236
LMACAQTGSGKTA F FPI+S PA P G+ R P L+L+PTREL
Sbjct: 209 LMACAQTGSGKTAGFLFPILSLAFDKGPAAVPVDQDAGMGYRPRKAYPTTLILAPTRELV 268
Query: 237 MQIHEEARKFSYQTGVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLS 296
QIHEE+RKF Y++ VR YGGA I Q+R++++G D+L ATPGRLVDL++R R+SL+
Sbjct: 269 CQIHEESRKFCYRSWVRPCAVYGGADIRAQIRQIDQGCDLLSATPGRLVDLIDRGRISLA 328
Query: 297 MIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPAGVRQTMLFSATFPKEIQRLASDFLSN 356
I++L LDEADRMLDMGFEPQIR IVE DM RQT++FSATFP++IQ LA DFL +
Sbjct: 329 NIKFLVLDEADRMLDMGFEPQIRHIVEGADMTSVEERQTLMFSATFPRDIQLLARDFLKD 388
Query: 357 YIFLAVGRVGSSTDLIDQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVETKKG 416
Y+FL+VGRVGS+++ I Q+V +V++S+KRS+L+D+LH G LTL+FVETK+
Sbjct: 389 YVFLSVGRVGSTSENITQKVVHVEDSEKRSYLLDILHTLPPEG------LTLIFVETKRM 442
Query: 417 ADALEHWLCLNNFPATTIHGDRSQQEREAALRSFKSGNTPILVATDVAARGLDIPHVAHV 476
AD L +L +NFPAT+IHGDR+Q+ERE AL F+SG T I+VAT VA+RGLDIP+V HV
Sbjct: 443 ADTLTDYLLNSNFPATSIHGDRTQRERERALELFRSGRTSIMVATAVASRGLDIPNVTHV 502
Query: 477 VNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNENNTSMARSLQDLMQEANQEVPAWLSR 536
+N+DLP DIDDYVHRIGRTGRAG G A AFFN NN +A+ L +L+QEANQE P++L
Sbjct: 503 INYDLPTDIDDYVHRIGRTGRAGNTGQAVAFFNRNNKGIAKELIELLQEANQECPSFLIA 562
Query: 537 FAARSSFGGGKNRRSGGGRFGGRDFRREGSFSRGGSDYHGAGNSGGGYGASGGYGGGGYG 596
A SSFGG GGR+ GR R G + G D+ NS GY + Y GYG
Sbjct: 563 MARESSFGG----NGRGGRYSGRGGR--GGNAYGARDFRRPTNSSSGYSSGPSY--SGYG 614
Query: 597 G 597
G
Sbjct: 615 G 615
Score = 31.6 bits (70), Expect = 6.4
Identities = 17/38 (44%), Positives = 20/38 (51%), Gaps = 5/38 (13%)
Query: 570 GGSDYHGAGNSGGGYGASGGYGG---GGY--GGGYAGN 602
G +Y+ G+ GGG G Y G GGY GGGY N
Sbjct: 73 GRREYNRGGHYGGGEGRQNNYRGGREGGYSNGGGYRNN 110
>DBP1_YEAST (P24784) Probable ATP-dependent RNA helicase DBP1
(Helicase CA1)
Length = 617
Score = 522 bits (1344), Expect = e-147
Identities = 299/619 (48%), Positives = 385/619 (61%), Gaps = 66/619 (10%)
Query: 30 NNAANTRPVYVPPHLRNRGPSAPAPAAPAFDNSGSRWAPPPRNDYRGGGG---------G 80
N + YVPPHLR+RG P+F+ S P + D GG G
Sbjct: 18 NGGGGGKSSYVPPHLRSRGK-------PSFERS-----TPKQEDKVTGGDFFRRAGRQTG 65
Query: 81 RGGGGYG-------------NRGGGGWDRREANPFADQDDSEEPVTQE------------ 115
GG +G NRGG + N + + P +
Sbjct: 66 NNGGFFGFSKERNGGTSANYNRGGSSNYKSSGNRWVNGKHIPGPKNAKLEAELFGVHDDP 125
Query: 116 EQENTGINFDAYEDIPVETSGGNVPPPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRHAI 175
+ ++GI FD Y++IPV+ SG +VP P+ F+ L E L +NI+ + KPTPVQ+++I
Sbjct: 126 DYHSSGIKFDNYDNIPVDASGKDVPEPILDFSSPPLDELLMENIKLASFTKPTPVQKYSI 185
Query: 176 PISLGGRDLMACAQTGSGKTAAFCFPIISGIMTGQPAQRPPRGV----RTVCPLALVLSP 231
PI GRDLMACAQTGSGKT F FP+ + + P+ P + R P ALVL+P
Sbjct: 186 PIVTKGRDLMACAQTGSGKTGGFLFPLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAP 245
Query: 232 TRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL+ QI EEARKF+Y++ VR V YGGAPI Q+RE++RG D+LVATPGRL DLLER
Sbjct: 246 TRELATQIFEEARKFTYRSWVRPCVVYGGAPIGNQMREVDRGCDLLVATPGRLNDLLERG 305
Query: 292 RVSLSMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPAGVRQTMLFSATFPKEIQRLAS 351
+VSL+ I+YL LDEADRMLDMGFEPQIR IVE+ DMP RQT++FSATFP +IQ LA
Sbjct: 306 KVSLANIKYLVLDEADRMLDMGFEPQIRHIVEECDMPSVENRQTLMFSATFPVDIQHLAR 365
Query: 352 DFLSNYIFLAVGRVGSSTDLIDQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFV 411
DFL NYIFL+VGRVGS+++ I QR+ YV + DK+S L+DLL A+ + LTL+FV
Sbjct: 366 DFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDLLSAEH-------KGLTLIFV 418
Query: 412 ETKKGADALEHWLCLNNFPATTIHGDRSQQEREAALRSFKSGNTPILVATDVAARGLDIP 471
ETK+ AD L +L + NF AT IHGDR+Q ERE AL +FK+ ILVAT VAARGLDIP
Sbjct: 419 ETKRMADQLTDFLIMQNFKATAIHGDRTQAERERALSAFKANVADILVATAVAARGLDIP 478
Query: 472 HVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNENNTSMARSLQDLMQEANQEVP 531
+V HV+N+DLP+DIDDYVHRIGRTGRAG G+AT+FFN NN ++ + L +++ EANQEVP
Sbjct: 479 NVTHVINYDLPSDIDDYVHRIGRTGRAGNTGVATSFFNSNNQNIVKGLMEILNEANQEVP 538
Query: 532 AWLSRFAARSSFGGGKNRRSGGGRF-----GGRDFRRE-GSFSRGGSDYHGAGNSGGGYG 585
+LS + ++S GG R GGG F G RD+R+ G+ S G + G S G
Sbjct: 539 TFLSDLSRQNSRGG--RTRGGGGFFNSRNNGSRDYRKHGGNGSFGSTRPRNTGTSNWG-S 595
Query: 586 ASGGYGGGGYGGGYAGNSA 604
GG+ GY ++A
Sbjct: 596 IGGGFRNDNEKNGYGNSNA 614
>DDX4_HUMAN (Q9NQI0) DEAD-box protein 4 (VASA homolog)
Length = 724
Score = 408 bits (1048), Expect = e-113
Identities = 239/511 (46%), Positives = 320/511 (61%), Gaps = 34/511 (6%)
Query: 75 RGGGGGRGGGGYG-------NRGGGGWDRREANPFADQDDSEEPVTQ------EEQEN-- 119
R G G GG G G W + EA D VT E++++
Sbjct: 201 RSGSGSERGGYKGLNEEVITGSGKNSW-KSEAEGGESSDTQGPKVTYIPPPPPEDEDSIF 259
Query: 120 ----TGINFDAYEDIPVETSGGNVPPPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRHAI 175
TGINFD Y+ I VE SG + PP + TF E +L + LN NI + Y K TPVQ+++I
Sbjct: 260 AHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSI 319
Query: 176 PISLGGRDLMACAQTGSGKTAAFCFPIISGIM-TGQPAQRPPRGVRTVCPLALVLSPTRE 234
PI L GRDLMACAQTGSGKTAAF PI++ +M G A R C ++++PTRE
Sbjct: 320 PIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQEPEC---IIVAPTRE 376
Query: 235 LSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVS 294
L QI+ EARKFS+ T VR VV YGG + +R++ +G +IL ATPGRL+D++ + ++
Sbjct: 377 LVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIG 436
Query: 295 LSMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPAGVRQTMLFSATFPKEIQRLASDFL 354
L I+YL LDEADRMLDMGF P+++K++ MP RQT++FSATFP+EIQRLA++FL
Sbjct: 437 LKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFL 496
Query: 355 -SNYIFLAVGRVGSSTDLIDQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVET 413
SNY+F+AVG+VG + + Q V V + KR L+++L R G T+VFVET
Sbjct: 497 KSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEIL---RNIG----DERTMVFVET 549
Query: 414 KKGADALEHWLCLNNFPATTIHGDRSQQEREAALRSFKSGNTPILVATDVAARGLDIPHV 473
KK AD + +LC T+IHGDR Q+ERE AL F+ G P+LVAT VAARGLDI +V
Sbjct: 550 KKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAARGLDIENV 609
Query: 474 AHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFN-ENNTSMARSLQDLMQEANQEVPA 532
HV+NFDLP+ ID+YVHRIGRTGR G G A +FF+ E++ +A+ L ++ +A Q+VPA
Sbjct: 610 QHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQQDVPA 669
Query: 533 WLSRFAARSSFGGGKNRRSGGGRFGGRDFRR 563
WL A S++ G + + G F D R+
Sbjct: 670 WLEEIAF-STYIPGFSGSTRGNVFASVDTRK 699
>DDX4_PIG (Q6GWX0) DEAD-box protein 4 (VASA homolog) (VASA-like
protein)
Length = 722
Score = 407 bits (1046), Expect = e-113
Identities = 245/546 (44%), Positives = 329/546 (59%), Gaps = 42/546 (7%)
Query: 41 PPHLRNRGPSAPAPAAPAFDNSGSRWAPPPRNDYRGGGGGRGGGGYGN--------RGGG 92
P RG PA ++G+ D GRG GGY G
Sbjct: 171 PDQGMQRGGGLFGSGRPAASDTGN-------GDTYQSRSGRGRGGYKGLNEEVVTGSGKN 223
Query: 93 GWDRREANPFADQDDSEEPVTQ------EEQEN------TGINFDAYEDIPVETSGGNVP 140
W + EA D VT E++++ TGINFD Y+ I VE SG + P
Sbjct: 224 SW-KSEAEGGESSDTQGPKVTYIPPPPPEDEDSIFAHYQTGINFDKYDTILVEVSGHDAP 282
Query: 141 PPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCF 200
P + TF E +L + LN NI + Y K TPVQ+++IPI L GRDLMACAQTGSGKTAAF
Sbjct: 283 PAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLL 342
Query: 201 PIISGIM-TGQPAQRPPRGVRTVCPLALVLSPTRELSMQIHEEARKFSYQTGVRVVVAYG 259
PI++ +M G A R C ++++PTREL QI+ EARKFS+ T VR VV YG
Sbjct: 343 PILAHMMHDGITASRFKELQEPEC---IIVAPTRELVNQIYLEARKFSFGTCVRAVVIYG 399
Query: 260 GAPINQQLRELERGVDILVATPGRLVDLLERARVSLSMIRYLALDEADRMLDMGFEPQIR 319
G + +R++ +G +IL ATPGRL+D++ + ++ L I+YL LDEADRMLDMGF P+++
Sbjct: 400 GTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMK 459
Query: 320 KIVEQMDMPPAGVRQTMLFSATFPKEIQRLASDFL-SNYIFLAVGRVGSSTDLIDQRVEY 378
K++ MP RQT++FSATFP+EIQRLA++FL SNY+F+AVG+VG + + Q
Sbjct: 460 KLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQADLQ 519
Query: 379 VQESDKRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADALEHWLCLNNFPATTIHGDR 438
V + KR L+++L R G T+VFVETKK AD + +LC T+IHGDR
Sbjct: 520 VGQYSKREKLLEIL---RNIG----DERTMVFVETKKKADFIATFLCQEKISTTSIHGDR 572
Query: 439 SQQEREAALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRA 498
Q+ERE AL F+ G P+LVAT VAARGLDI +V HV+NFDLP+ ID+YVHRIGRTGR
Sbjct: 573 EQREREQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRC 632
Query: 499 GKKGLATAFFN-ENNTSMARSLQDLMQEANQEVPAWLSRFAARSSFGGGKNRRSGGGRFG 557
G G A +FF+ E++ +A+ L ++ +A Q+VPAWL A S++ G + + G F
Sbjct: 633 GNTGRAISFFDLESDNHLAQPLVKVLTDAQQDVPAWLEEIAF-STYIPGFSGSTRGNVFA 691
Query: 558 GRDFRR 563
D R+
Sbjct: 692 SVDTRK 697
>DDX4_MOUSE (Q61496) DEAD-box protein 4 (VASA homolog) (Mvh)
Length = 702
Score = 404 bits (1038), Expect = e-112
Identities = 242/543 (44%), Positives = 324/543 (59%), Gaps = 46/543 (8%)
Query: 47 RGPSAPAPAAPAFDNSGSRWAPPPRNDYRGGGGGRGGGGYGN------RGGGGWDRREAN 100
RG PA +SG+ D G G GGY G G +
Sbjct: 152 RGGGLFGSRKPAASDSGN-------GDTYQSRSGSGRGGYKGLNEEVVTGSGKNSWKSET 204
Query: 101 PFADQDDSEEPVTQ-------EEQEN------TGINFDAYEDIPVETSGGNVPPPVNTFA 147
+ DS+ P E++++ TGINFD Y+ I VE SG + PP + TF
Sbjct: 205 EGGESSDSQGPKVTYIPPPPPEDEDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFE 264
Query: 148 EIDLGEALNQNIRRCKYVKPTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIISGIM 207
E +L + LN NI + Y K TPVQ+++IPI L GRDLMACAQTGSGKTAAF PI++ +M
Sbjct: 265 EANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMM 324
Query: 208 T-GQPAQRPPRGVRTVCPLALVLSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQ 266
G A R C ++++PTREL QI+ EARKFS+ T VR VV YGG
Sbjct: 325 RDGITASRFKELQEPEC---IIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHS 381
Query: 267 LRELERGVDILVATPGRLVDLLERARVSLSMIRYLALDEADRMLDMGFEPQIRKIVEQMD 326
+R++ +G +IL ATPGRL+D++ + ++ L ++YL LDEADRMLDMGF P+++K++
Sbjct: 382 VRQIVQGCNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPG 441
Query: 327 MPPAGVRQTMLFSATFPKEIQRLASDFL-SNYIFLAVGRVGSSTDLIDQRVEYVQESDKR 385
MP RQT+LFSATFP+EIQRLA DFL S+Y+F+AVG+VG + + Q + V + KR
Sbjct: 442 MPSKEQRQTLLFSATFPEEIQRLAGDFLKSSYLFVAVGQVGGACRDVQQTILQVGQYSKR 501
Query: 386 SHLMDLLHAQRANGVQGKQALTLVFVETKKGADALEHWLCLNNFPATTIHGDRSQQEREA 445
L+++L R G T+VFVETKK AD + +LC T+IHGDR Q+ERE
Sbjct: 502 EKLVEIL---RNIG----DERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQ 554
Query: 446 ALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLAT 505
AL F+ G P+LVAT VAARGLDI +V HV+NFDLP+ ID+YVHRIGRTGR G G A
Sbjct: 555 ALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAI 614
Query: 506 AFFN-ENNTSMARSLQDLMQEANQEVPAWLSRFAARS----SFGGGKNRRSGGGRFGGRD 560
+FF+ +++ +A+ L ++ +A Q+VPAWL A + SF GG F D
Sbjct: 615 SFFDTDSDNHLAQPLVKVLSDAQQDVPAWLEEIAFSTYVPPSFSSSTR---GGAVFASVD 671
Query: 561 FRR 563
R+
Sbjct: 672 TRK 674
>DDX4_RAT (Q64060) DEAD-box protein 4 (VASA homolog) (rVLG)
Length = 713
Score = 399 bits (1024), Expect = e-110
Identities = 220/447 (49%), Positives = 294/447 (65%), Gaps = 13/447 (2%)
Query: 120 TGINFDAYEDIPVETSGGNVPPPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRHAIPISL 179
TGINFD Y+ I VE SG + PP + TF E +L + LN NI + Y K TPVQ+++IPI L
Sbjct: 249 TGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVL 308
Query: 180 GGRDLMACAQTGSGKTAAFCFPIISGIMT-GQPAQRPPRGVRTVCPLALVLSPTRELSMQ 238
GRDLMACAQTGSGKTAAF PI++ +M G A R C ++++PTREL Q
Sbjct: 309 AGRDLMACAQTGSGKTAAFLLPILAHMMRDGITASRFKELQEPEC---IIVAPTRELINQ 365
Query: 239 IHEEARKFSYQTGVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLSMI 298
I+ EARKFS+ T VR VV YGG +R++ +G +IL ATPGRL+D++ + ++ L +
Sbjct: 366 IYLEARKFSFGTCVRAVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQV 425
Query: 299 RYLALDEADRMLDMGFEPQIRKIVEQMDMPPAGVRQTMLFSATFPKEIQRLASDFL-SNY 357
+YL LDEADRMLDMGF P+++K++ MP RQT+LFSATFP+EIQRLA +FL SNY
Sbjct: 426 KYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAGEFLKSNY 485
Query: 358 IFLAVGRVGSSTDLIDQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVETKKGA 417
+F+AVG+VG + + Q + V K+ L+++L R G +VFVETKK A
Sbjct: 486 LFVAVGQVGGACRDVQQSILQVGPVFKKRKLVEIL---RNIG----DERPMVFVETKKKA 538
Query: 418 DALEHWLCLNNFPATTIHGDRSQQEREAALRSFKSGNTPILVATDVAARGLDIPHVAHVV 477
D + +LC T+IHGDR Q+ERE AL F+ G P+LVAT VAARGLDI +V HV+
Sbjct: 539 DFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVI 598
Query: 478 NFDLPNDIDDYVHRIGRTGRAGKKGLATAFFN-ENNTSMARSLQDLMQEANQEVPAWLSR 536
NF+LP+ ID+YVHRIGRTGR G G A +FF+ E++ +A+ L ++ +A Q+VPAWL
Sbjct: 599 NFNLPSTIDEYVHRIGRTGRCGNTGRAISFFDTESDNHLAQPLVKVLSDAQQDVPAWLEE 658
Query: 537 FAARSSFGGGKNRRSGGGRFGGRDFRR 563
A S + + G F D R+
Sbjct: 659 IAFSSYAPPSFSNSTRGAVFASFDTRK 685
>VASA_DROME (P09052) Vasa protein (Antigen Mab46F11)
Length = 661
Score = 390 bits (1002), Expect = e-108
Identities = 218/519 (42%), Positives = 315/519 (60%), Gaps = 50/519 (9%)
Query: 77 GGGGRG-------GGGYGNRGGGGWDRREANP---------FADQDDSEEPVTQEEQEN- 119
GG RG GG G RG GG+ RR N D + E E N
Sbjct: 151 GGERRGRLDREERGGERGERGDGGFARRRRNEDDINNNNNIVEDVERKREFYIPPEPSND 210
Query: 120 ----------TGINFDAYEDIPVETSGGNVPPPVNTFAEIDLGEALNQNIRRCKYVKPTP 169
+GI+F Y +IPV+ +G +VP P+ F DL + + N+ + Y PTP
Sbjct: 211 AIEIFSSGIASGIHFSKYNNIPVKVTGSDVPQPIQHFTSADLRDIIIDNVNKSGYKIPTP 270
Query: 170 VQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIISGIMTGQPAQRPPRGVRTVCPLALVL 229
+Q+ +IP+ GRDLMACAQTGSGKTAAF PI+S ++ P + P +++
Sbjct: 271 IQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILSKLL------EDPHELELGRPQVVIV 324
Query: 230 SPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 289
SPTREL++QI EARKF++++ +++ + YGG Q + RG +++ATPGRL+D ++
Sbjct: 325 SPTRELAIQIFNEARKFAFESYLKIGIVYGGTSFRHQNECITRGCHVVIATPGRLLDFVD 384
Query: 290 RARVSLSMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPAGVRQTMLFSATFPKEIQRL 349
R ++ R++ LDEADRMLDMGF +R+I+ + M P QT++FSATFP+EIQR+
Sbjct: 385 RTFITFEDTRFVVLDEADRMLDMGFSEDMRRIMTHVTMRPE--HQTLMFSATFPEEIQRM 442
Query: 350 ASDFLSNYIFLAVGRVGSSTDLIDQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLV 409
A +FL NY+F+A+G VG + + Q + V + KRS L+++L +++A+G T+V
Sbjct: 443 AGEFLKNYVFVAIGIVGGACSDVKQTIYEVNKYAKRSKLIEIL-SEQADG-------TIV 494
Query: 410 FVETKKGADALEHWLCLNNFPATTIHGDRSQQEREAALRSFKSGNTPILVATDVAARGLD 469
FVETK+GAD L +L FP T+IHGDR Q +RE ALR FK+G+ +L+AT VA+RGLD
Sbjct: 495 FVETKRGADFLASFLSEKEFPTTSIHGDRLQSQREQALRDFKNGSMKVLIATSVASRGLD 554
Query: 470 IPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFN-ENNTSMARSLQDLMQEANQ 528
I ++ HV+N+D+P+ IDDYVHRIGRTGR G G AT+FF+ E + ++A L +++ + Q
Sbjct: 555 IKNIKHVINYDMPSKIDDYVHRIGRTGRVGNNGRATSFFDPEKDRAIAADLVKILEGSGQ 614
Query: 529 EVPAWLSRFAARSSFGGGKNRRSGGGRFGGRDFRREGSF 567
VP +L R GG N+ FGG D R G++
Sbjct: 615 TVPDFL-RTCGAGGDGGYSNQ-----NFGGVDVRGRGNY 647
Score = 37.7 bits (86), Expect = 0.089
Identities = 28/66 (42%), Positives = 33/66 (49%), Gaps = 12/66 (18%)
Query: 544 GGGKNRRSGGGRFGGRDF------RREGS--FSRGGSDYHGA--GNSGGGYGASGGYGG- 592
GGG+ +GG R G RD RREG F G + G G+ GG G+ GG GG
Sbjct: 62 GGGRGGGAGGYRGGNRDGGGFHGGRREGERDFRGGEGGFRGGQGGSRGGQGGSRGGQGGF 121
Query: 593 -GGYGG 597
GG GG
Sbjct: 122 RGGEGG 127
Score = 36.2 bits (82), Expect = 0.26
Identities = 29/64 (45%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 544 GGGKNRRSGGGRFGGRDFRR-EGSFSRG-GSDYHGAGNSGGGYGASGGYGGGGYGGGYAG 601
GGG + GG R G RDFR EG F G G G G S GG G G G GG+ G
Sbjct: 79 GGGFH---GGRREGERDFRGGEGGFRGGQGGSRGGQGGSRGGQGGFRG-GEGGFRGRLYE 134
Query: 602 NSAG 605
N G
Sbjct: 135 NEDG 138
Score = 33.5 bits (75), Expect = 1.7
Identities = 25/63 (39%), Positives = 27/63 (42%), Gaps = 9/63 (14%)
Query: 550 RSGGGRFGGRDFRREGSFSRGGSDYHGAGNSG------GGYGASGGYGGG-GYGGGYAGN 602
R GGGR GG R G+ R G +HG G G G GG GG G GG G
Sbjct: 60 RIGGGRGGGAGGYRGGN--RDGGGFHGGRREGERDFRGGEGGFRGGQGGSRGGQGGSRGG 117
Query: 603 SAG 605
G
Sbjct: 118 QGG 120
Score = 33.1 bits (74), Expect = 2.2
Identities = 27/71 (38%), Positives = 30/71 (42%), Gaps = 15/71 (21%)
Query: 545 GGKNRRSGGGRFGGRD-FRREGSFSRGGSDYHGAGNSGGGYGASGGYGGG---------G 594
GG GG + G RD F R G RGG GAG GG GG+ GG G
Sbjct: 41 GGSGGEGGGYQGGNRDVFGRIGG-GRGG----GAGGYRGGNRDGGGFHGGRREGERDFRG 95
Query: 595 YGGGYAGNSAG 605
GG+ G G
Sbjct: 96 GEGGFRGGQGG 106
Score = 32.7 bits (73), Expect = 2.9
Identities = 22/62 (35%), Positives = 24/62 (38%), Gaps = 8/62 (12%)
Query: 552 GGGRFGGRDFRREGSFSRGGSDYHGAGNSGGGY--------GASGGYGGGGYGGGYAGNS 603
GG D + S G G+G GGGY G GG GGG GG GN
Sbjct: 18 GGDWSDDEDTAKSFSGEAEGDGVGGSGGEGGGYQGGNRDVFGRIGGGRGGGAGGYRGGNR 77
Query: 604 AG 605
G
Sbjct: 78 DG 79
Score = 32.0 bits (71), Expect = 4.9
Identities = 20/56 (35%), Positives = 23/56 (40%), Gaps = 4/56 (7%)
Query: 546 GKNRRSGGGRFGGRDFRREGSFSRGGSDYHGAGNSGGGYGASGGYGGGGYGGGYAG 601
G+ G G GG G + G D G G G GA G GG GGG+ G
Sbjct: 33 GEAEGDGVGGSGGEG----GGYQGGNRDVFGRIGGGRGGGAGGYRGGNRDGGGFHG 84
Score = 31.2 bits (69), Expect = 8.3
Identities = 14/24 (58%), Positives = 16/24 (66%)
Query: 73 DYRGGGGGRGGGGYGNRGGGGWDR 96
D+RGG GG GG G+RGG G R
Sbjct: 92 DFRGGEGGFRGGQGGSRGGQGGSR 115
>RM62_DROME (P19109) ATP-dependent RNA helicase P62
Length = 719
Score = 375 bits (963), Expect = e-103
Identities = 227/552 (41%), Positives = 315/552 (56%), Gaps = 53/552 (9%)
Query: 71 RNDYRGGGGG-RGGGGYGNRGGGGWDRREANPFADQDDSEEPVTQEE--QENTGI----- 122
R D RGGG GGGG+G+R GGG + P D S ++ QE+ +
Sbjct: 199 RRDDRGGGNRFGGGGGFGDRRGGGGGGSQDLPMRPVDFSNLAPFKKNFYQEHPNVANRSP 258
Query: 123 -NFDAYEDIPVETSGGNVPPPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRHAIPISLGG 181
Y + T G VP P+ F+E+ L + + + IRR Y PT +Q PI++ G
Sbjct: 259 YEVQRYREEQEITVRGQVPNPIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSG 318
Query: 182 RDLMACAQTGSGKTAAFCFPIISGIMTGQPAQRPPRGVRTVCPLALVLSPTRELSMQIHE 241
+ + A+TGSGKT + P I I QP QR P+ALVL+PTREL+ QI +
Sbjct: 319 SNFVGIAKTGSGKTLGYILPAIVHINNQQPLQRGDG------PIALVLAPTRELAQQIQQ 372
Query: 242 EARKFSYQTGVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLSMIRYL 301
A +F + VR +GGAP Q+R+L+RG +I++ATPGRL+D L +L YL
Sbjct: 373 VATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYL 432
Query: 302 ALDEADRMLDMGFEPQIRKIVEQMDMPPAGVRQTMLFSATFPKEIQRLASDFLSNYIFLA 361
LDEADRMLDMGFEPQIRKIV Q+ RQT+++SAT+PKE+++LA DFL NYI +
Sbjct: 433 VLDEADRMLDMGFEPQIRKIVSQIRPD----RQTLMWSATWPKEVKQLAEDFLGNYIQIN 488
Query: 362 VGRVGSSTD-----LIDQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVETKKG 416
+G + S + ++D E+ +E ++ L D+ + G ++FVETK+
Sbjct: 489 IGSLELSANHNIRQVVDVCDEFSKEEKLKTLLSDIYDTSESPGK------IIIFVETKRR 542
Query: 417 ADALEHWLCLNNFPATTIHGDRSQQEREAALRSFKSGNTPILVATDVAARGLDIPHVAHV 476
D L ++ IHGD+SQ ER+ LR F+SG + ILVATDVAARGLD+ + +V
Sbjct: 543 VDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYV 602
Query: 477 VNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNENNTSMARSLQDLMQEANQEVPAWLSR 536
+NFD P + +DY+HRIGRTGR+ KG + AFF +NN A++L D+++EANQE+ L
Sbjct: 603 INFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALEN 662
Query: 537 FAARSSF--GGGKNR---RSGGGRFGGRDFRREGSFSRGGSDYHGAGNSGGGYGASGGYG 591
A S + GGG++R GGGRFGG F++ GS S G G+G
Sbjct: 663 LARNSRYDGGGGRSRYGGGGGGGRFGGGGFKK-GSLSNG-----------------RGFG 704
Query: 592 GGGYGGGYAGNS 603
GGG GGG +S
Sbjct: 705 GGGGGGGEGRHS 716
Score = 40.0 bits (92), Expect = 0.018
Identities = 27/60 (45%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Query: 540 RSSFGGGKNRRSGGGRFGGRDFR--REGSFSRGGSDYHGAGNSGGGYGASGGYGGGGYGG 597
R GGG NR GGG GG D+ R G + D G GN GG G G GGG GG
Sbjct: 169 RRGGGGGGNRFGGGG--GGGDYHGIRNGRVEKRRDD-RGGGNRFGGGGGFGDRRGGGGGG 225
Score = 32.7 bits (73), Expect = 2.9
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 559 RDFRREGSFSRGGSDYHGAGNSGGGYGASGGYGGGGYGGGYAG 601
RDF G RGG GGG G +GGGG GG Y G
Sbjct: 150 RDFGHSGRGGRGGDRGGDDRRGGGGGGNR--FGGGGGGGDYHG 190
>DBP2_YEAST (P24783) P68-like protein
Length = 546
Score = 375 bits (962), Expect = e-103
Identities = 225/547 (41%), Positives = 318/547 (58%), Gaps = 65/547 (11%)
Query: 69 PPRNDYRGGGGGRGGGGYGNRG-GGGWDRR-------EANPFAD----QDDSEEPVTQEE 116
P +YRGG GGR WD E N + + +D S+ + Q
Sbjct: 37 PQGGNYRGGFGGRSNYNQPQELIKPNWDEELPKLPTFEKNFYVEHESVRDRSDSEIAQFR 96
Query: 117 QENTGINFDAYEDIPVETSGGNVPPPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRHAIP 176
+EN + SG ++P P+ TF E + + ++ + KPT +Q P
Sbjct: 97 KENE-----------MTISGHDIPKPITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWP 145
Query: 177 ISLGGRDLMACAQTGSGKTAAFCFPIISGIMTGQPAQRPPRGVRTVCPLALVLSPTRELS 236
++L GRD++ A TGSGKT ++C P I I QP P G P+ LVL+PTREL+
Sbjct: 146 MALSGRDMVGIAATGSGKTLSYCLPGIVHI-NAQPLLAPGDG-----PIVLVLAPTRELA 199
Query: 237 MQIHEEARKFSYQTGVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLS 296
+QI E KF + + +R YGG P +QQ+R+L RG +I++ATPGRL+D+LE + +L
Sbjct: 200 VQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIGKTNLK 259
Query: 297 MIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPAGVRQTMLFSATFPKEIQRLASDFLSN 356
+ YL LDEADRMLDMGFEPQIRKIV+Q+ RQT+++SAT+PKE+++LA+D+L++
Sbjct: 260 RVTYLVLDEADRMLDMGFEPQIRKIVDQIRPD----RQTLMWSATWPKEVKQLAADYLND 315
Query: 357 YIFLAVGRVG-SSTDLIDQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVETKK 415
I + VG + S++ I Q VE V + +KR L L Q + TL+F TK+
Sbjct: 316 PIQVQVGSLELSASHNITQIVEVVSDFEKRDRLNKYLETAS----QDNEYKTLIFASTKR 371
Query: 416 GADALEHWLCLNNFPATTIHGDRSQQEREAALRSFKSGNTPILVATDVAARGLDIPHVAH 475
D + +L + +PA IHGD+ Q+ER+ L+ F++G +PI+VATDVAARG+D+ + +
Sbjct: 372 MCDDITKYLREDGWPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAARGIDVKGINY 431
Query: 476 VVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNENNTSMARSLQDLMQEANQEVPAWLS 535
V+N+D+P +I+DYVHRIGRTGRAG G A +FF E N + L +M+EANQ +P L
Sbjct: 432 VINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNKGLGAKLISIMREANQNIPPELL 491
Query: 536 RFAARSSFGGGKNRRSGGGRFGGRDFRREGSFSRGGSDYHGAGNSGGGYGASGGYGGGGY 595
++ R S+GGG + R GGGR GGR GGYG GGYGGG
Sbjct: 492 KY-DRRSYGGG-HPRYGGGR-GGR----------------------GGYGRRGGYGGG-- 524
Query: 596 GGGYAGN 602
GGY GN
Sbjct: 525 RGGYGGN 531
>DBP2_SCHPO (P24782) P68-like protein
Length = 550
Score = 372 bits (954), Expect = e-102
Identities = 228/581 (39%), Positives = 320/581 (54%), Gaps = 79/581 (13%)
Query: 61 NSGSRWAPPPRNDYRGGGGGRGGG------GYGNRGGG----------------GWDRRE 98
NS R+ RN+Y GGGRGG GY RG G W
Sbjct: 20 NSRGRYGGGYRNNY-SRGGGRGGFNDGASYGYDQRGQGRNFYESDGPGANLVKKDWKNET 78
Query: 99 ANPFADQDDSEEPVTQEEQENTGINFDAYEDIPVETSGGNVPPPVNTFAEIDLGEALNQN 158
PF E + + + ++I V G NVP PV TF E + +
Sbjct: 79 LIPFQKDFYKEHENVRNRSDAEVTEYRKEKEIVVH--GLNVPKPVTTFEEAGFPNYVLKE 136
Query: 159 IRRCKYVKPTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIISGIMTGQPAQRPPRG 218
+++ + PTP+Q+ A P+++ GRD++ + TGSGKT ++C P I I QP P G
Sbjct: 137 VKQLGFEAPTPIQQQAWPMAMSGRDMVGISATGSGKTLSYCLPAIVHI-NAQPLLSPGDG 195
Query: 219 VRTVCPLALVLSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRELERGVDILV 278
P+ LVL+PTREL++QI +E KF + +R YGG P Q+R+L RGV+I +
Sbjct: 196 -----PIVLVLAPTRELAVQIQQECTKFGKSSRIRNTCVYGGVPRGPQIRDLIRGVEICI 250
Query: 279 ATPGRLVDLLERARVSLSMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPAGVRQTMLF 338
ATPGRL+D+L+ + +L + YL LDEADRMLDMGFEPQIRKIV+Q+ RQT++F
Sbjct: 251 ATPGRLLDMLDSNKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPD----RQTVMF 306
Query: 339 SATFPKEIQRLASDFLSNYIFLAVGRVG-SSTDLIDQRVEYVQESDKRSHL---MDLLHA 394
SAT+PKE+QRLA D+L++YI + VG + +++ I Q VE V +DKR+ L ++ +
Sbjct: 307 SATWPKEVQRLARDYLNDYIQVTVGSLDLAASHNIKQIVEVVDNADKRARLGKDIEEVLK 366
Query: 395 QRANGVQGKQALTLVFVETKKGADALEHWLCLNNFPATTIHGDRSQQEREAALRSFKSGN 454
R N V L+F TK+ AD + +L + +PA IHGD++Q ER+ L F++G
Sbjct: 367 DRDNKV-------LIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTGK 419
Query: 455 TPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNENNTS 514
+PI+VATDVA+RG+D+ + HV N+D P + +DYVHRIGRTGRAG KG A +F +N
Sbjct: 420 SPIMVATDVASRGIDVKGITHVFNYDFPGNTEDYVHRIGRTGRAGAKGTAYTYFTSDNAK 479
Query: 515 MARSLQDLMQEANQEVPAWLSRFAARSSFGGGKNRRSGGGRFGGRDFRREGSFSRGGSDY 574
AR L ++ EA Q++ L A R S GGR G ++RR
Sbjct: 480 QARELVSILSEAKQDIDPKLEEMA----------RYSSGGR--GGNYRR----------- 516
Query: 575 HGAGNSGGGYGASGGYGGGGYGG---GYAGNSAGPXVTTAW 612
GGYG G GGGYG G+ G+++ P + W
Sbjct: 517 -------GGYGRGGFRRGGGYGNRNRGFTGSNSAPLARSRW 550
>DD17_HUMAN (Q92841) Probable RNA-dependent helicase p72 (DEAD-box
protein p72) (DEAD-box protein 17)
Length = 650
Score = 343 bits (880), Expect = 8e-94
Identities = 224/584 (38%), Positives = 303/584 (51%), Gaps = 58/584 (9%)
Query: 63 GSRWAPPPRNDYRGGGGGRGGGG-----YGNRGGG----GWDRREANPFADQDDSEEPVT 113
G + R+ RGG G RGGGG +GN G WD E F E P
Sbjct: 3 GGGFGDRDRDRDRGGFGARGGGGLPPKKFGNPGERLRKKKWDLSELPKFEKNFYVEHPEV 62
Query: 114 QEEQENTGINFDAYEDIPVETSGGNV-PPPVNTFAEIDLGEALNQNIRRCKYVKPTPVQR 172
++I V GG+V P PV F + + + + + +PTP+Q
Sbjct: 63 ARLTPYEVDELRRKKEITVR--GGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQC 120
Query: 173 HAIPISLGGRDLMACAQTGSGKTAAFCFPIISGIMTGQPAQRPPRGVRTVCPLALVLSPT 232
P++L GRD++ AQTGSGKT A+ P I I P R P+ LVL+PT
Sbjct: 121 QGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHI------NHQPYLERGDGPICLVLAPT 174
Query: 233 RELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERAR 292
REL+ Q+ + A + + ++ YGGAP Q+R+LERGV+I +ATPGRL+D LE +
Sbjct: 175 RELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGK 234
Query: 293 VSLSMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPAGVRQTMLFSATFPKEIQRLASD 352
+L YL LDEADRMLDMGFEPQIRKIV+Q+ RQT+++SAT+PKE+++LA D
Sbjct: 235 TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPD----RQTLMWSATWPKEVRQLAED 290
Query: 353 FLSNYIFLAVGRVG-SSTDLIDQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFV 411
FL +Y + VG + S+ I Q V+ ES+K L+ L+ A K+ T++FV
Sbjct: 291 FLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAE----KENKTIIFV 346
Query: 412 ETKKGADALEHWLCLNNFPATTIHGDRSQQEREAALRSFKSGNTPILVATDVAARGLDIP 471
ETK+ D L + + +PA IHGD+SQ ER+ L F+SG PIL+ATDVA+RGLD+
Sbjct: 347 ETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVE 406
Query: 472 HVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNENNTSMARSLQDLMQEANQEVP 531
V V+N+D PN +DYVHRIGRT R+ KG A FF N AR L +++EANQ +
Sbjct: 407 DVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAIN 466
Query: 532 AWLSRFAARSSFGGGKNRRS---------------------------GGGRFGGRDFRRE 564
L + GGG RS GGR +R
Sbjct: 467 PKLMQLVDHRGGGGGGGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDR 526
Query: 565 GSFSRGG-SDYHGAGNSGGGYGASGG---YGGGGYGGGYAGNSA 604
R G ++ G G+ +GA G YG G YG G S+
Sbjct: 527 SETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSS 570
>DB10_NICSY (P46942) RNA helicase-like protein DB10
Length = 607
Score = 339 bits (869), Expect = 1e-92
Identities = 227/584 (38%), Positives = 308/584 (51%), Gaps = 57/584 (9%)
Query: 49 PSAPAPAAPAFDNS---GSRWAPPPRNDYRGGGGGRGGGGYGNRGGGGWDRREANPFADQ 105
PS+ A +APA +S S P + GG G DR F D
Sbjct: 52 PSSHAVSAPAHKSSVFVSSSVEKPSQGQRYDADGGHNRGSNNKIARSSSDR-----FHDG 106
Query: 106 DDSEEPVTQEEQENTGINFDAYEDI-----PVETSGGNVPPPVNTFAEIDLGEALNQNIR 160
E + G+ D ++ + +GG+VP P+ +F + + +
Sbjct: 107 TS-----VHEGYGSLGVGSDISQESYCRRNEISVTGGDVPAPLTSFEATGFPSEIVREMH 161
Query: 161 RCKYVKPTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIISGIMTGQPAQRPPRGVR 220
+ + PTP+Q + PI+L GRD++A A+TGSGKT + P I Q + P G
Sbjct: 162 QAGFSAPTPIQAQSWPIALQGRDIVAIAKTGSGKTLGYLMPAF--IHLQQRRKNPQLG-- 217
Query: 221 TVCPLALVLSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRELERGVDILVAT 280
P LVLSPTREL+ QI EA KF + + YGGAP QLREL RGVDI+VAT
Sbjct: 218 ---PTILVLSPTRELATQIQAEAVKFGKSSRISCTCLYGGAPKGPQLRELSRGVDIVVAT 274
Query: 281 PGRLVDLLERARVSLSMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPAGVRQTMLFSA 340
PGRL D+LE RVSL + YL LDEADRMLDMGFEPQIRKIV+++ + RQT++++A
Sbjct: 275 PGRLNDILEMRRVSLGQVSYLVLDEADRMLDMGFEPQIRKIVKEVPVQ----RQTLMYTA 330
Query: 341 TFPKEIQRLASDFLSNYIFLAVGRVGS--STDLIDQRVEYVQESDKRSHLMDLLHAQRAN 398
T+PK ++++A+D L N + + +G V + I Q +E V +K+ + +L ++
Sbjct: 331 TWPKGVRKIAADLLVNSVQVNIGNVDELVANKSITQHIEVVLPMEKQRRVEQILRSKEPG 390
Query: 399 GVQGKQALTLVFVETKKGADALEHWLCLNNFPATTIHGDRSQQEREAALRSFKSGNTPIL 458
+ ++F TKK D L L NF A IHGD+SQ ER+ L F++G +P+L
Sbjct: 391 ------SKIIIFCSTKKMCDQLSRNL-TRNFGAAAIHGDKSQGERDYVLSQFRAGRSPVL 443
Query: 459 VATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNENNTSMARS 518
VATDVAARGLDI + V+N+D P I+DYVHRIGRTGRAG GLA FF++ ++ A
Sbjct: 444 VATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGASGLAYTFFSDQDSKHALD 503
Query: 519 LQDLMQEANQEVPAWLSRFAARSSFGGGKNRRSGGGRFGGRDFRREGSFSRGG---SDYH 575
L +++ ANQ VP L A+R G G+ R G GGR RGG S Y
Sbjct: 504 LVKVLEGANQCVPTELRDMASRGG-GMGRARNHWGSGPGGRG-------GRGGPYNSSYV 555
Query: 576 GAGNSGGGYGA----SGGYGGGGYGGG---YAGNSAGPXVTTAW 612
G N G GY S YG G Y S P + + W
Sbjct: 556 GR-NGGHGYDRGSRDSDRYGHGTYNADAPRKRSRSRSPNIGSGW 598
>DDX5_MOUSE (Q61656) Probable RNA-dependent helicase p68 (DEAD-box
protein p68) (DEAD-box protein 5) (DEAD-box RNA helicase
DEAD1) (mDEAD1)
Length = 614
Score = 331 bits (848), Expect = 4e-90
Identities = 218/560 (38%), Positives = 298/560 (52%), Gaps = 49/560 (8%)
Query: 75 RGGGGGRGGGG---------YGNRGGG----GWDRREANPFADQDDSEEPVTQEEQENTG 121
RG G R GG +GN G W+ E F E P + T
Sbjct: 14 RGFGAPRFGGSRTGPLSGKKFGNPGEKLVKKKWNLDELPKFEKNFYQEHP---DLARRTA 70
Query: 122 INFDAYE-DIPVETSGGNVPPPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRHAIPISLG 180
D Y + G N P PV F E + + I R + +PT +Q P++L
Sbjct: 71 QEVDTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARHNFTEPTAIQAQGWPVALS 130
Query: 181 GRDLMACAQTGSGKTAAFCFPIISGIMTGQPAQRPPRGVRTVCPLALVLSPTRELSMQIH 240
G D++ AQTGSGKT ++ P I I P R P+ LVL+PTREL+ Q+
Sbjct: 131 GLDMVGVAQTGSGKTLSYLLPAIVHI------NHHPFLERGDGPICLVLAPTRELAQQVQ 184
Query: 241 EEARKFSYQTGVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLSMIRY 300
+ A ++ ++ YGGAP Q+R+LERGV+I +ATPGRL+D LE + +L Y
Sbjct: 185 QVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTY 244
Query: 301 LALDEADRMLDMGFEPQIRKIVEQMDMPPAGVRQTMLFSATFPKEIQRLASDFLSNYIFL 360
L LDEADRMLDMGFEPQIRKIV+Q+ RQT+++SAT+PKE+++LA DFL +YI +
Sbjct: 245 LVLDEADRMLDMGFEPQIRKIVDQIRPD----RQTLMWSATWPKEVRQLAEDFLKDYIHI 300
Query: 361 AVGRVG-SSTDLIDQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADA 419
+G + S+ I Q V+ + +K L+ L+ + K+ T+VFVETK+ D
Sbjct: 301 NIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSE----KENKTIVFVETKRRCDE 356
Query: 420 LEHWLCLNNFPATTIHGDRSQQEREAALRSFKSGNTPILVATDVAARGLDIPHVAHVVNF 479
L + + +PA IHGD+SQQER+ L FK G PIL+ATDVA+RGLD+ V V+N+
Sbjct: 357 LTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINY 416
Query: 480 DLPNDIDDYVHRIGRTGRAGKKGLATAFFNENNTSMARSLQDLMQEANQEVPAWL----- 534
D PN +DY+HRIGRT R+ K G A FF NN L +++EANQ + L
Sbjct: 417 DYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVE 476
Query: 535 SRFAARSSFGGG-----KNRRSGGGRFGGRDFRREGSFSRGGSDY----HGAGNSGGGYG 585
R + RS GG ++R S G R G FR ++ RG S+ GA G Y
Sbjct: 477 DRGSGRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRENYDRGYSNLLKRDFGAKTQNGVYS 536
Query: 586 ASGGYGGGGYGGGYAGNSAG 605
A+ Y G +G + SAG
Sbjct: 537 AA-NYTNGSFGSNFV--SAG 553
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.316 0.136 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,182,304
Number of Sequences: 164201
Number of extensions: 4162402
Number of successful extensions: 66774
Number of sequences better than 10.0: 1166
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 391
Number of HSP's that attempted gapping in prelim test: 22396
Number of HSP's gapped (non-prelim): 16690
length of query: 612
length of database: 59,974,054
effective HSP length: 116
effective length of query: 496
effective length of database: 40,926,738
effective search space: 20299662048
effective search space used: 20299662048
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)
Medicago: description of AC146760.13