Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146758.5 - phase: 0 /pseudo
         (1461 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

KR42_HUMAN (Q9BYR5) Keratin associated protein 4-2 (Keratin asso...    34  3.4
K415_HUMAN (Q9BYQ5) Keratin associated protein 4-15 (Keratin ass...    33  7.5

>KR42_HUMAN (Q9BYR5) Keratin associated protein 4-2 (Keratin
           associated protein 4.2) (Ultrahigh sulfur keratin
           associated protein 4.2)
          Length = 136

 Score = 33.9 bits (76), Expect = 3.4
 Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 2/34 (5%)

Query: 6   WKKRCCVS-CCSTSCC-PSCGTTT*RKCWCERGS 37
           ++ +CC S CC  +CC PSCG TT  +  C R S
Sbjct: 86  FRPQCCQSVCCQPTCCRPSCGQTTCCRTTCYRPS 119


>K415_HUMAN (Q9BYQ5) Keratin associated protein 4-15 (Keratin
          associated protein 4.15) (Ultrahigh sulfur keratin
          associated protein 4.15) (Fragment)
          Length = 193

 Score = 32.7 bits (73), Expect = 7.5
 Identities = 14/28 (50%), Positives = 16/28 (57%)

Query: 10 CCVSCCSTSCCPSCGTTT*RKCWCERGS 37
          C  +CC  SCCPSC  TT  +  C R S
Sbjct: 44 CQPTCCRPSCCPSCCQTTCCRTTCCRPS 71


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.371    0.167    0.662 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 129,401,438
Number of Sequences: 164201
Number of extensions: 4325284
Number of successful extensions: 17674
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 17594
Number of HSP's gapped (non-prelim): 39
length of query: 1461
length of database: 59,974,054
effective HSP length: 123
effective length of query: 1338
effective length of database: 39,777,331
effective search space: 53222068878
effective search space used: 53222068878
T: 11
A: 40
X1: 14 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.8 bits)
S2: 72 (32.3 bits)


Medicago: description of AC146758.5