
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146758.5 - phase: 0 /pseudo
(1461 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KR42_HUMAN (Q9BYR5) Keratin associated protein 4-2 (Keratin asso... 34 3.4
K415_HUMAN (Q9BYQ5) Keratin associated protein 4-15 (Keratin ass... 33 7.5
>KR42_HUMAN (Q9BYR5) Keratin associated protein 4-2 (Keratin
associated protein 4.2) (Ultrahigh sulfur keratin
associated protein 4.2)
Length = 136
Score = 33.9 bits (76), Expect = 3.4
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Query: 6 WKKRCCVS-CCSTSCC-PSCGTTT*RKCWCERGS 37
++ +CC S CC +CC PSCG TT + C R S
Sbjct: 86 FRPQCCQSVCCQPTCCRPSCGQTTCCRTTCYRPS 119
>K415_HUMAN (Q9BYQ5) Keratin associated protein 4-15 (Keratin
associated protein 4.15) (Ultrahigh sulfur keratin
associated protein 4.15) (Fragment)
Length = 193
Score = 32.7 bits (73), Expect = 7.5
Identities = 14/28 (50%), Positives = 16/28 (57%)
Query: 10 CCVSCCSTSCCPSCGTTT*RKCWCERGS 37
C +CC SCCPSC TT + C R S
Sbjct: 44 CQPTCCRPSCCPSCCQTTCCRTTCCRPS 71
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.371 0.167 0.662
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 129,401,438
Number of Sequences: 164201
Number of extensions: 4325284
Number of successful extensions: 17674
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 17594
Number of HSP's gapped (non-prelim): 39
length of query: 1461
length of database: 59,974,054
effective HSP length: 123
effective length of query: 1338
effective length of database: 39,777,331
effective search space: 53222068878
effective search space used: 53222068878
T: 11
A: 40
X1: 14 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.8 bits)
S2: 72 (32.3 bits)
Medicago: description of AC146758.5