BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146757.2 + phase: 0
(1715 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
POLX_TOBAC (P10978) Retrovirus-related Pol polyprotein from tran... 527 e-149
COPI_DROME (P04146) Copia protein (Gag-int-pol protein) [Contain... 517 e-145
YCH4_YEAST (P25600) Transposon Ty5-1 34.5 kDa hypothetical protein 167 2e-40
M810_ARATH (P92519) Hypothetical mitochondrial protein AtMg00810... 159 6e-38
YCB9_YEAST (P25384) Transposon Ty2 protein B (Ty1-17 protein B) 131 2e-29
YME4_YEAST (Q04711) Transposon Ty1 protein B 128 2e-28
YMU0_YEAST (Q04670) Transposon Ty1 protein B 125 8e-28
YMT5_YEAST (Q04214) Transposon Ty1 protein B 124 2e-27
YMD9_YEAST (Q03434) Transposon Ty1 protein B 124 3e-27
YJZ7_YEAST (P47098) Transposon Ty1 protein B 122 1e-26
YJZ9_YEAST (P47100) Transposon Ty1 protein B 121 1e-26
YJL3_YEAST (P47024) Transposon Ty4 207.7 kDa hypothetical protein 118 1e-25
M820_ARATH (P92520) Hypothetical mitochondrial protein AtMg00820... 110 3e-23
ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog (X-li... 65 2e-09
M240_ARATH (P93290) Hypothetical mitochondrial protein AtMg00240... 63 6e-09
MST2_DROHY (Q08696) Axoneme-associated protein mst101(2) 61 2e-08
POL_FOAMV (P14350) Pol polyprotein [Contains: Reverse transcript... 60 5e-08
RA50_NANEQ (P62135) DNA double-strand break repair rad50 ATPase 55 2e-06
USO1_YEAST (P25386) Intracellular protein transport protein USO1 54 4e-06
GOA4_HUMAN (Q13439) Golgi autoantigen, golgin subfamily A member... 54 4e-06
>POLX_TOBAC (P10978) Retrovirus-related Pol polyprotein from
transposon TNT 1-94 [Contains: Protease (EC 3.4.23.-);
Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Length = 1328
Score = 527 bits (1358), Expect = e-149
Identities = 367/1228 (29%), Positives = 607/1228 (48%), Gaps = 88/1228 (7%)
Query: 531 EEKSKEYSLKSYCDCIKDGLKSTFVPEGTNAKTAVQSKPEASGS--QAKITSKPENLKIK 588
EE+ K L + D L +T + + KT ++ K S K+ KPEN
Sbjct: 140 EEEDKAILLLNSLPSSYDNLATTIL----HGKTTIELKDVTSALLLNEKMRKKPENQGQA 195
Query: 589 VMTKSVPKSQKITILKRSETVHQNLIKPESKIPKQK----------------DQKNKAAT 632
++T+ +S + + + + K SK + +K K T
Sbjct: 196 LITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCYNCNQPGHFKRDCPNPRKGKGET 255
Query: 633 ASEKTIPKGVKPKVLNDQKLLSIHPKV-CLRAREKQRSWYLDSGCSRHMTGEKALFLTLT 691
+ +K ND +L I+ + C+ + W +D+ S H T + LF
Sbjct: 256 SGQKNDDNTAAMVQNNDNVVLFINEEEECMHLSGPESEWVVDTAASHHATPVRDLFCRYV 315
Query: 692 MKDGGEVKFGGNQTGKIIGTGTIG-----NSSISINNVWLVDGLKHNLLSISQFCDNGYD 746
D G VK G KI G G I ++ + +V V L+ NL+S +GY+
Sbjct: 316 AGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYE 375
Query: 747 VTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLADQKVVCLLSMNDKKW-----VWH 801
F+ L + KG +Y+ N +C +N + +WH
Sbjct: 376 SYFANQKWRLTK--GSLVIAKGVARGTLYRTNAE-------ICQGELNAAQDEISVDLWH 426
Query: 802 KRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKIVKSSFKSKDIVSTSRPLE 861
KR+GH + + + ++K L+ C C GK + SF++ S+ R L
Sbjct: 427 KRMGHMSEKGLQILAKKSLISYAKGTTVKP---CDYCLFGKQHRVSFQT----SSERKLN 479
Query: 862 LLHI---DLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACEVFSSFCIQIQSE 918
+L + D+ GP+ S+ G+KY + +DD SR WV +K+KD +VF F ++ E
Sbjct: 480 ILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERE 539
Query: 919 KELNILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNRVVERKNRTLQEMARTM 978
+ ++RSD+GGE+ + FE +C HGI HE + P TPQ N V ER NRT+ E R+M
Sbjct: 540 TGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSM 599
Query: 979 IHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQFGCTCYILN 1038
+ L K FW EAV T+CY+ NR P+ + ++ + + S+ FGC +
Sbjct: 600 LRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHV 659
Query: 1039 TKDYLKKFDAKAQRGIFLGYSERSKAYRVYNSETQCVEESMHVKFDDRE--PGSKTSEQS 1096
K+ K D K+ IF+GY + YR+++ + V S V F + E + SE+
Sbjct: 660 PKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSEKV 719
Query: 1097 ESNAGTTDSEDASESDQPSDSEKYTEVESSPEAEITPEAESNSEAEPSSKVQNEIASEDF 1156
++ S S+ P+ +E T+ E++ + E +P ++ E
Sbjct: 720 KNGIIPNFVTIPSTSNNPTSAESTTD-------EVSEQGE-----QPGEVIEQ---GEQL 764
Query: 1157 QDNTQQVIQPKFKHKSSHPEELIIGSKESPRRTRSHFRQEESLIGLLSIIEPKTVEEALS 1216
+ ++V P + P + E PR + E ++ + EP++++E LS
Sbjct: 765 DEGVEEVEHPTQGEEQHQP----LRRSERPRVESRRYPSTEYVL-ISDDREPESLKEVLS 819
Query: 1217 ---DDGWILAMQEELNQFQRNDVWDLVPKPFQKNIIGTKWVFRNKLNEQGEVTRNKARLV 1273
+ + AMQEE+ Q+N + LV P K + KWVF+ K + ++ R KARLV
Sbjct: 820 HPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLV 879
Query: 1274 AQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVKSAFLNGVIEEEVYVK 1333
+G+ Q++GID+ E F+PV ++ +IR +LS A + + + Q+DVK+AFL+G +EEE+Y++
Sbjct: 880 VKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYME 939
Query: 1334 QPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTL-FRKTLK 1392
QP GFE V KL KSLYGLKQAPR WY + +F+ + + D + F++ +
Sbjct: 940 QPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSE 999
Query: 1393 KDILIVQIYVDDIIFGSSNASLCKEFSKLMQDEFEMSMMGELKFFMGIQI--NQSKEGVY 1450
+ +I+ +YVDD++ + L + + F+M +G + +G++I ++ ++
Sbjct: 1000 NNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLW 1059
Query: 1451 VHQTKYTKELLKKFKLEDCKMMNTPMHPTCTLSKEDTGTVVDQK------LYRGMIGSLL 1504
+ Q KY + +L++F +++ K ++TP+ LSK+ T V++K Y +GSL+
Sbjct: 1060 LSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLM 1119
Query: 1505 Y-LTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGF 1563
Y + +RPDI +V + +RF +P + H AVK I RYL+GTT L + S D L G+
Sbjct: 1120 YAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGS-DPILKGY 1178
Query: 1564 CDADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMK 1623
DAD AGD RKS++G ISW SK Q +A+ST EAEYI+A +++W+K
Sbjct: 1179 TDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLK 1238
Query: 1624 HQLEDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQFID 1683
L++ ++ +YCD+ +AI LSKN + H+R KHI++++H+IR+ V L + I
Sbjct: 1239 RFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKIS 1298
Query: 1684 TEHQWADIFTKPLSVERFDFIKKNLNMH 1711
T AD+ TK + +F+ K+ + MH
Sbjct: 1299 TNENPADMLTKVVPRNKFELCKELVGMH 1326
Score = 57.4 bits (137), Expect = 3e-07
Identities = 72/324 (22%), Positives = 123/324 (37%), Gaps = 77/324 (23%)
Query: 33 KFNGDPEEFSWWKTNMYSF--------IMGLDEELWDILEDGVDDLDLDEEGAAIDRRIH 84
KFNGD FS W+ M ++ +D + D ++ D DLDE A+ R
Sbjct: 10 KFNGD-NGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMK-AEDWADLDERAASAIR--- 64
Query: 85 TPAQKKLYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALM 144
L+ + II D+ TA+ ++ L + + + L
Sbjct: 65 ------LHLSDDVVNNII-------------DEDTARGIWTRLESLYMSKTLTNK---LY 102
Query: 145 LVHQYELFRMKDDESIEEMYSRFQTLVSGLQILKKSYVSSDHVSKILRSLPSRWRPKVTA 204
L Q M + + + F L++ L L D +L SLPS + T
Sbjct: 103 LKKQLYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATT 162
Query: 205 IEEAKDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKT-SKSSKAYKASESE 263
I K T+ ++D+ S+L ++E + E + +++ +G++ +SS Y S +
Sbjct: 163 ILHGK--TTIELKDVTSALLLNEKMRKKPEN--QGQALITEGRGRSYQRSSNNYGRSGA- 217
Query: 264 EESPDGDSDEDQSVKMAMLSNKLEYLARKQKKFLSKRGSYKNFKKEDQKGCFNCKKPGHF 323
RG KN K + C+NC +PGHF
Sbjct: 218 ------------------------------------RGKSKNRSKSRVRNCYNCNQPGHF 241
Query: 324 IADCPDLQKEKFKGKSKKSSFNSS 347
DCP+ +K K + +K+ N++
Sbjct: 242 KRDCPNPRKGKGETSGQKNDDNTA 265
>COPI_DROME (P04146) Copia protein (Gag-int-pol protein) [Contains:
Copia VLP protein; Copia protease (EC 3.4.23.-)]
Length = 1409
Score = 517 bits (1331), Expect = e-145
Identities = 346/1132 (30%), Positives = 573/1132 (50%), Gaps = 115/1132 (10%)
Query: 672 LDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTIG------NSSISINNVW 725
LDSG S H+ +++L+ T +++ +K + G+ I G + I++ +V
Sbjct: 291 LDSGASDHLINDESLY-TDSVEVVPPLKIAVAKQGEFIYATKRGIVRLRNDHEITLEDVL 349
Query: 726 LVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLADQ 785
NL+S+ + + G + F K+ T ++K+ + + NV INF
Sbjct: 350 FCKEAAGNLMSVKRLQEAGMSIEFDKSGVT-ISKNGLMVVKNSGMLNNVPVINFQ----- 403
Query: 786 KVVCLLSMNDKKW----VWHKRLGHANWRLISKISKLQLVKG---LPNIDYHSDALCGAC 838
S+N K +WH+R GH + + +I + + L N++ + +C C
Sbjct: 404 ----AYSINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCE-ICEPC 458
Query: 839 QKGKIVKSSFKS-KDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKF 897
GK + FK KD RPL ++H D+ GP+ +L Y ++ VD ++ +
Sbjct: 459 LNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYL 518
Query: 898 IKSKDYACEVFSSFCIQIQSEKELNILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRT 957
IK K +F F + ++ L ++ + D+G E+ + FC K GI + + P T
Sbjct: 519 IKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHT 578
Query: 958 PQQNRVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLE--KTAYE 1015
PQ N V ER RT+ E ARTM+ L K FW EAV T+ Y+ NRI R +++ KT YE
Sbjct: 579 PQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYE 638
Query: 1016 LFKGRRPNISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERS------------K 1063
++ ++P + + FG T Y+ + K+ KFD K+ + IF+GY
Sbjct: 639 MWHNKKPYLKHLRVFGATVYV-HIKNKQGKFDDKSFKSIFVGYEPNGFKLWDAVNEKFIV 697
Query: 1064 AYRVYNSETQCVEESMHVKF------DDREPGSKT----------------SEQSESNAG 1101
A V ET V S VKF D +E +K S++ ++
Sbjct: 698 ARDVVVDETNMVN-SRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQF 756
Query: 1102 TTDSEDASESDQPSDSEKYTEVESSPEAEITPEAESNSEAEPSSKV----QNEIASEDFQ 1157
DS+++ + P+DS K + E E++ + +++ S+K + +D
Sbjct: 757 LKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHL 816
Query: 1158 DNTQQVIQPKFKHKSSHPEEL---------------IIGSKESPRRTRSHFRQEESLIGL 1202
+ ++ P +S E L II + +T+ E L
Sbjct: 817 NESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSL 876
Query: 1203 LSII---------EPKTVEEALSDD---GWILAMQEELNQFQRNDVWDLVPKPFQKNIIG 1250
++ P + +E D W A+ ELN + N+ W + +P KNI+
Sbjct: 877 NKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVD 936
Query: 1251 TKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGI 1310
++WVF K NE G R KARLVA+G++Q+ IDY ETFAPVAR+ + R +LS I + +
Sbjct: 937 SRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNL 996
Query: 1311 ILYQMDVKSAFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSN 1370
++QMDVK+AFLNG ++EE+Y++ P G + D+V KL K++YGLKQA R W++
Sbjct: 997 KVHQMDVKTAFLNGTLKEEIYMRLPQGIS--CNSDNVCKLNKAIYGLKQAARCWFEVFEQ 1054
Query: 1371 FLIKNDFERGQVDTTLF---RKTLKKDILIVQIYVDDIIFGSSNASLCKEFSKLMQDEFE 1427
L + +F VD ++ + + ++I ++ +YVDD++ + + + F + + ++F
Sbjct: 1055 ALKECEFVNSSVDRCIYILDKGNINENIYVL-LYVDDVVIATGDMTRMNNFKRYLMEKFR 1113
Query: 1428 MSMMGELKFFMGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKMMNTPMHPTCTL----S 1483
M+ + E+K F+GI+I ++ +Y+ Q+ Y K++L KF +E+C ++TP+ S
Sbjct: 1114 MTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNS 1173
Query: 1484 KEDTGTVVDQKLYRGMIGSLLY-LTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYL 1542
ED T R +IG L+Y + +RPD+ +V + +R+ S +KR+ RYL
Sbjct: 1174 DEDCNTPC-----RSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYL 1228
Query: 1543 KGTTNLGLLYRKSLDY--KLIGFCDADYAGDRIERKSTSGNC-QFLGENLISWASKRQAT 1599
KGT ++ L+++K+L + K+IG+ D+D+AG I+RKST+G + NLI W +KRQ +
Sbjct: 1229 KGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNS 1288
Query: 1600 IAMSTAEAEYISAASCCTQLLWMKHQLEDYQIN-ANSIPIYCDNTAAICLSKNPILHSRA 1658
+A S+ EAEY++ + LW+K L I N I IY DN I ++ NP H RA
Sbjct: 1289 VAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRA 1348
Query: 1659 KHIEIKHHFIRDYVQKGILDIQFIDTEHQWADIFTKPLSVERFDFIKKNLNM 1710
KHI+IK+HF R+ VQ ++ +++I TE+Q ADIFTKPL RF ++ L +
Sbjct: 1349 KHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKLGL 1400
Score = 35.0 bits (79), Expect = 1.8
Identities = 47/211 (22%), Positives = 80/211 (37%), Gaps = 43/211 (20%)
Query: 119 TAKAMFASLCANFEGSKKVKEAKALMLVHQYELFRMKDDESIEEMYSRFQTLVSGLQILK 178
TA+ + +L A +E + A L L + ++ + S+ + F L+S L
Sbjct: 76 TARQILENLDAVYE---RKSLASQLALRKRLLSLKLSSEMSLLSHFHIFDELISELLAAG 132
Query: 179 KSYVSSDHVSKILRSLPSRWRPKVTAIEEAKDLNTLSVEDLVSSLKVHEMSL-NEH-ETS 236
D +S +L +LPS + +TAIE + N L++ + + L E+ + N+H +TS
Sbjct: 133 AKIEEMDKISHLLITLPSCYDGIITAIETLSEEN-LTLAFVKNRLLDQEIKIKNDHNDTS 191
Query: 237 KKSKSIALPSKGKTSKSSKAYKASESEEESPDGDSDEDQSVKMAMLSNKLEYLARKQKKF 296
KK + + + T K +N + K KK
Sbjct: 192 KKVMNAIVHNNNNTYK------------------------------NNLFKNRVTKPKKI 221
Query: 297 LSKRGSYKNFKKEDQKGCFNCKKPGHFIADC 327
YK C +C + GH DC
Sbjct: 222 FKGNSKYK-------VKCHHCGREGHIKKDC 245
>YCH4_YEAST (P25600) Transposon Ty5-1 34.5 kDa hypothetical protein
Length = 308
Score = 167 bits (423), Expect = 2e-40
Identities = 94/308 (30%), Positives = 167/308 (53%), Gaps = 3/308 (0%)
Query: 1315 MDVKSAFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIK 1374
MDV +AFLN ++E +YVKQPPGF + ++PD+V++L +YGLKQAP W + ++N L K
Sbjct: 1 MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60
Query: 1375 NDFERGQVDTTLFRKTLKKDILIVQIYVDDIIFGSSNASLCKEFSKLMQDEFEMSMMGEL 1434
F R + + L+ ++ + + +YVDD++ + + + + + + M +G++
Sbjct: 61 IGFCRHEGEHGLYFRSTSDGPIYIGVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120
Query: 1435 KFFMGIQINQSKEG-VYVHQTKYTKELLKKFKLEDCKMMNTPMHPTCTLSKEDTGTVVDQ 1493
F+G+ I+QS G + + Y + + ++ K+ TP+ + L + + + D
Sbjct: 121 DKFLGLNIHQSTNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDI 180
Query: 1494 KLYRGMIGSLLY-LTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLY 1552
Y+ ++G LL+ RPDI + V L +RF +PR HL + +R+ RYL T ++ L Y
Sbjct: 181 TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKY 240
Query: 1553 RKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKR-QATIAMSTAEAEYIS 1611
R L +CDA + ST G L ++W+SK+ + I + + EAEYI+
Sbjct: 241 RSGSQVALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAEYIT 300
Query: 1612 AASCCTQL 1619
A+ ++
Sbjct: 301 ASETVMEI 308
>M810_ARATH (P92519) Hypothetical mitochondrial protein AtMg00810
(ORF240b)
Length = 240
Score = 159 bits (402), Expect = 6e-38
Identities = 82/222 (36%), Positives = 128/222 (56%), Gaps = 1/222 (0%)
Query: 1400 IYVDDIIFGSSNASLCKEFSKLMQDEFEMSMMGELKFFMGIQINQSKEGVYVHQTKYTKE 1459
+YVDDI+ S+ +L + F M +G + +F+GIQI G+++ QTKY ++
Sbjct: 5 LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64
Query: 1460 LLKKFKLEDCKMMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASRPDILFSVCL 1519
+L + DCK M+TP+ P S T D +R ++G+L YLT +RPDI ++V +
Sbjct: 65 ILNNAGMLDCKPMSTPL-PLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNI 123
Query: 1520 CARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTS 1579
+ +P + +KR+ RY+KGT GL K+ + FCD+D+AG R+ST+
Sbjct: 124 VCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTT 183
Query: 1580 GNCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLW 1621
G C FLG N+ISW++KRQ T++ S+ E EY + A +L W
Sbjct: 184 GFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>YCB9_YEAST (P25384) Transposon Ty2 protein B (Ty1-17 protein B)
Length = 1770
Score = 131 bits (329), Expect = 2e-29
Identities = 142/629 (22%), Positives = 283/629 (44%), Gaps = 48/629 (7%)
Query: 1103 TDSEDASESDQPSDSEKYTE--VESSPEAEITPEAESNSEAEPSSKVQNEIASEDFQDNT 1160
TD+ D S+ D P + T + ++ + +S + ++ + E++ + + +
Sbjct: 1157 TDTSDVSK-DIPHIHSRQTNSSLGGMDDSNVLTTTKSKKRSLEDNETEIEVSRDTWNNKN 1215
Query: 1161 QQVIQPKFKHKSSHPEELIIGSKESPRRTRSHFRQEESLIGLLSIIEPKTVEEALSDDGW 1220
+ ++P K + I G K S + R+ R +E++ ++ D +
Sbjct: 1216 MRSLEPPRSKKRINLIAAIKGVK-SIKPVRTTLRYDEAIT---------YNKDNKEKDRY 1265
Query: 1221 ILAMQEELNQFQRNDVWDLVPKPFQKNIIGTKWVFRNKL--NEQGEVTRNKARLVAQGYS 1278
+ A +E++Q + + WD K + +N I K V + N++ + T +KAR VA+G
Sbjct: 1266 VEAYHKEISQLLKMNTWD-TNKYYDRNDIDPKKVINSMFIFNKKRDGT-HKARFVARGDI 1323
Query: 1279 QQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVKSAFLNGVIEEEVYVKQPPGF 1338
Q ++ + A+ LS A+++ + Q+D+ SA+L I+EE+Y++ PP
Sbjct: 1324 QHPDTYDSDMQSNTVHHYALMTSLSIALDNDYYITQLDISSAYLYADIKEELYIRPPP-- 1381
Query: 1339 EDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIK-NDFERGQVDTTLFRKTLKKDILI 1397
L D + +L+KSLYGLKQ+ WY+ + ++LI D + + + +F K +
Sbjct: 1382 -HLGLNDKLLRLRKSLYGLKQSGANWYETIKSYLINCCDMQEVRGWSCVF----KNSQVT 1436
Query: 1398 VQIYVDDIIFGSSNASLCKEFSKLMQDEFEMSMMGELKFFMGIQINQSKEGVYVHQTKYT 1457
+ ++VDD+I S + + K+ ++ +++ ++ + IQ + + ++KY
Sbjct: 1437 ICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRSKYM 1496
Query: 1458 KELLKKFKLEDCKMMNTPMHPTCTLSKE--DTGTVVDQ------------KLY--RGMIG 1501
K ++K E +N P++P + G +DQ K++ + +IG
Sbjct: 1497 KLGMEKSLTEKLPKLNVPLNPKGKKLRAPGQPGHYIDQDELEIDEDEYKEKVHEMQKLIG 1556
Query: 1502 SLLYLTAS-RPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSL---- 1556
Y+ R D+L+ + A+ P L + +++ T + L++ K+
Sbjct: 1557 LASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKPTKP 1616
Query: 1557 DYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAASCC 1616
D KL+ DA Y G++ KS GN L +I S + + ST EAE + +
Sbjct: 1617 DNKLVAISDASY-GNQPYYKSQIGNIFLLNGKVIGGKSTKASLTCTSTTEAEIHAVSEAI 1675
Query: 1617 TQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHS-RAKHIEIKHHFIRDYVQKG 1675
L + H +++ + D+ + I + K+ R + K +RD V
Sbjct: 1676 PLLNNLSHLVQELNKKPIIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRDEVSGN 1735
Query: 1676 ILDIQFIDTEHQWADIFTKPLSVERFDFI 1704
L + +I+T+ AD+ TKPL ++ F +
Sbjct: 1736 NLYVYYIETKKNIADVMTKPLPIKTFKLL 1764
Score = 100 bits (250), Expect = 3e-20
Identities = 100/386 (25%), Positives = 165/386 (41%), Gaps = 26/386 (6%)
Query: 801 HKRLGHANWRLISKISKLQLVKGLPNIDYH---------SDALCGACQKGKIVKSSFKSK 851
H+ LGHAN+R I K K V L D D L G K + VK S
Sbjct: 595 HRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKY 654
Query: 852 DIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFI--KSKDYACEVFS 909
+ P + LH D+FGPV+ Y + D+ +R+ WV + + ++ VF+
Sbjct: 655 Q--ESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFT 712
Query: 910 SFCIQIQSEKELNILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNRVVERKNR 969
S I+++ +L ++ D G E+ N+ F GI +++ + + V ER NR
Sbjct: 713 SILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNR 772
Query: 970 TLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQ 1029
TL RT++H + L H W AV S I+N + + P +K+A + +I+
Sbjct: 773 TLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSL-VSPKNDKSARQHAGLAGLDITTILP 831
Query: 1030 FGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVY-NSETQCVEESMHVKFDDREP 1088
FG I+N + K + G L S S Y +Y S + V+ + +V D++
Sbjct: 832 FG-QPVIVNNHNPDSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQDKQ- 889
Query: 1089 GSKTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESSPEAEITPEAESNSEAE-PSSKV 1147
SK + + D + + S E+ E E S + + + SE E S +
Sbjct: 890 -SKLDQFNYDTLTFDDDLNRLTAHNQSFIEQ-NETEQSYDQNTESDHDYQSEIEINSDPL 947
Query: 1148 QNEIASEDF------QDNTQQVIQPK 1167
N+ +S+ ++ Q+V PK
Sbjct: 948 VNDFSSQSINPLQLDKEPVQKVRAPK 973
>YME4_YEAST (Q04711) Transposon Ty1 protein B
Length = 1328
Score = 128 bits (321), Expect = 2e-28
Identities = 146/616 (23%), Positives = 270/616 (43%), Gaps = 61/616 (9%)
Query: 1116 DSEKYTEVESSPEAEITPEAESNSEAEPSSKVQNEIASEDFQDNTQQVIQPKFKHKSSHP 1175
DS YT + S + E E +++ + + + ++P K H
Sbjct: 741 DSNAYTTINSKKRSLEDNETEI------------KVSRDTWNTKNMRSLEPPRSKKRIH- 787
Query: 1176 EELIIGSK--ESPRRTRSHFRQEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQR 1233
LI K +S + R+ R +E+ I K ++E + +I A +E+NQ +
Sbjct: 788 --LIAAVKAVKSIKPIRTTLRYDEA------ITYNKDIKEK---EKYIEAYHKEVNQLLK 836
Query: 1234 NDVWDLVPKPFQKNIIGTKWVFRNKL--NEQGEVTRNKARLVAQGYSQQEGIDYTETFAP 1291
+ WD K + + I K V + N + + T +KAR VA+G Q + +
Sbjct: 837 MNTWD-TDKYYDRKEIDPKRVINSMFIFNRKRDGT-HKARFVARGDIQHPDTYDSGMQSN 894
Query: 1292 VARLEAIRLLLSYAINHGIILYQMDVKSAFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLK 1351
A+ LS A+++ + Q+D+ SA+L I+EE+Y++ PP L D + +LK
Sbjct: 895 TVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPP---HLGMNDKLIRLK 951
Query: 1352 KSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRKTLKKDILIVQIYVDDIIFGSSN 1411
KSLYGLKQ+ WY+ + ++LIK + G + + K + + ++VDD+I S +
Sbjct: 952 KSLYGLKQSGANWYETIKSYLIK---QCGMEEVRGWSCVFKNSQVTICLFVDDMILFSKD 1008
Query: 1412 ASLCKEFSKLMQDEFEMSMMGELKFFMGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKM 1471
+ K+ ++ +++ ++ + IQ + + + KY K ++ E
Sbjct: 1009 LNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRGKYMKLGMENSLTEKIPK 1068
Query: 1472 MNTPMHP--TCTLSKEDTGTVVDQ------------KLY--RGMIGSLLYLTAS-RPDIL 1514
+N P++P + G +DQ K++ + +IG Y+ R D+L
Sbjct: 1069 LNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYKEKVHEMQKLIGLASYVGYKFRFDLL 1128
Query: 1515 FSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSL----DYKLIGFCDADYAG 1570
+ + A+ P L + +++ T + L++ K+ D KL+ DA Y G
Sbjct: 1129 YYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKPTEPDNKLVAISDASY-G 1187
Query: 1571 DRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQ 1630
++ KS GN L +I S + + ST EAE + + L + H +++
Sbjct: 1188 NQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNNLSHLVQELN 1247
Query: 1631 INANSIPIYCD--NTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQFIDTEHQW 1688
+ + D +T +I +S N R + K +RD V L + +I+T+
Sbjct: 1248 KKPITKGLLTDSKSTISIIISNNE-EKFRNRFFGTKAMRLRDEVSGNHLHVCYIETKKNI 1306
Query: 1689 ADIFTKPLSVERFDFI 1704
AD+ TKPL ++ F +
Sbjct: 1307 ADVMTKPLPIKTFKLL 1322
Score = 92.0 bits (227), Expect = 1e-17
Identities = 87/374 (23%), Positives = 162/374 (43%), Gaps = 33/374 (8%)
Query: 801 HKRLGHANWRLISKISKLQLVKGLPN--------IDYHS-DALCGACQKGKIVKSSFKSK 851
H+ L HAN + I K + IDY D L G K + +K S
Sbjct: 172 HRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSRLKY 231
Query: 852 DIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFI--KSKDYACEVFS 909
++ P + LH D+FGPV+ Y + D+ +++ WV + + +D +VF+
Sbjct: 232 Q--NSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFT 289
Query: 910 SFCIQIQSEKELNILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNRVVERKNR 969
+ I+++ + ++L ++ D G E+ N F EK+GI +++ + + V ER NR
Sbjct: 290 TILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNR 349
Query: 970 TLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQ 1029
TL + RT + + L H W A+ S ++N + P +K+A + +IS
Sbjct: 350 TLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSL-ASPKSKKSARQHAGLAGLDISTLLP 408
Query: 1030 FGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVY-NSETQCVEESMHVKFDDREP 1088
FG I+N + K + G L S S Y +Y S + V+ + +V +E
Sbjct: 409 FG-QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKES 467
Query: 1089 G---------------SKTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESSPE--AEI 1131
++ + +S + + + + + + SD + +++E PE +
Sbjct: 468 RLDQFNYDALTFDEDLNRLTASYQSFIASNEIQQSDDLNIESDHDFQSDIELHPEQPRNV 527
Query: 1132 TPEAESNSEAEPSS 1145
+A S +++ P S
Sbjct: 528 LSKAVSPTDSTPPS 541
>YMU0_YEAST (Q04670) Transposon Ty1 protein B
Length = 1328
Score = 125 bits (315), Expect = 8e-28
Identities = 145/624 (23%), Positives = 270/624 (43%), Gaps = 77/624 (12%)
Query: 1116 DSEKYTEVESSPEAEITPEAESNSEAEPSSKVQNEIASEDFQDNTQQVIQPKFKHKSSHP 1175
DS YT + S + E E +++ + + + ++P K H
Sbjct: 741 DSNAYTTINSKKRSLEDNETEI------------KVSRDTWNTKNMRSLEPPRSKKRIH- 787
Query: 1176 EELIIGSK--ESPRRTRSHFRQEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQR 1233
LI K +S + R+ R +E+ I K ++E + +I A +E+NQ +
Sbjct: 788 --LIAAVKAVKSIKPIRTTLRYDEA------ITYNKDIKEK---EKYIQAYHKEVNQLLK 836
Query: 1234 NDVWDLV-----PKPFQKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTET 1288
WD + K +I + ++F K + +KAR VA+G I + +T
Sbjct: 837 MKTWDTDRYYDRKEIDPKRVINSMFIFNRKRDGT-----HKARFVARG-----DIQHPDT 886
Query: 1289 FAPVARLE-----AIRLLLSYAINHGIILYQMDVKSAFLNGVIEEEVYVKQPPGFEDLKH 1343
+ P + A+ LS A+++ + Q+D+ SA+L I+EE+Y++ PP L
Sbjct: 887 YDPGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPP---HLGM 943
Query: 1344 PDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRKTLKKDILIVQIYVD 1403
D + +LKKSLYGLKQ+ WY+ + ++LIK + G + + K + + ++VD
Sbjct: 944 NDKLIRLKKSLYGLKQSGANWYETIKSYLIK---QCGMEEVRGWSCVFKNSQVTICLFVD 1000
Query: 1404 DIIFGSSNASLCKEFSKLMQDEFEMSMMGELKFFMGIQINQSKEGVYVHQTKYTKELLKK 1463
D+I S + + K+ ++ +++ ++ + IQ + + + KY K ++
Sbjct: 1001 DMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRGKYMKLGMEN 1060
Query: 1464 FKLEDCKMMNTPMHP--TCTLSKEDTGTVVDQK--------------LYRGMIGSLLYLT 1507
E +N P++P + G +DQ+ + +IG Y+
Sbjct: 1061 SLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQQELELEEDDYKMKVHEMQKLIGLASYVG 1120
Query: 1508 AS-RPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDY----KLIG 1562
R D+L+ + A+ P + L + +++ T + L++ KS KL+
Sbjct: 1121 YKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQLIWHKSKPVKPTNKLVV 1180
Query: 1563 FCDADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWM 1622
DA Y G++ KS GN L +I S + + ST EAE + + L +
Sbjct: 1181 ISDASY-GNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNNL 1239
Query: 1623 KHQLEDYQINANSIPIYCD--NTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQ 1680
H +++ + + D +T +I +S N R + K +RD V L +
Sbjct: 1240 SHLVQELNKKPITKGLLTDSKSTISIIISNNE-EKFRNRFFGTKAMRLRDEVSGNHLHVC 1298
Query: 1681 FIDTEHQWADIFTKPLSVERFDFI 1704
+I+T+ AD+ TKPL ++ F +
Sbjct: 1299 YIETKKNIADVMTKPLPIKTFKLL 1322
Score = 92.0 bits (227), Expect = 1e-17
Identities = 87/374 (23%), Positives = 162/374 (43%), Gaps = 33/374 (8%)
Query: 801 HKRLGHANWRLISKISKLQLVKGLPN--------IDYHS-DALCGACQKGKIVKSSFKSK 851
H+ L HAN + I K + IDY D L G K + +K S
Sbjct: 172 HRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSRLKY 231
Query: 852 DIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFI--KSKDYACEVFS 909
++ P + LH D+FGPV+ Y + D+ +++ WV + + +D +VF+
Sbjct: 232 Q--NSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFT 289
Query: 910 SFCIQIQSEKELNILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNRVVERKNR 969
+ I+++ + ++L ++ D G E+ N F EK+GI +++ + + V ER NR
Sbjct: 290 TILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNR 349
Query: 970 TLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQ 1029
TL + RT + + L H W A+ S ++N + P +K+A + +IS
Sbjct: 350 TLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSL-ASPKSKKSARQHAGLAGLDISTLLP 408
Query: 1030 FGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVY-NSETQCVEESMHVKFDDREP 1088
FG I+N + K + G L S S Y +Y S + V+ + +V +E
Sbjct: 409 FG-QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKES 467
Query: 1089 G---------------SKTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESSPE--AEI 1131
++ + +S + + + + + + SD + +++E PE +
Sbjct: 468 RLDQFNYDALTFDEDLNRLTASYQSFIASNEIQQSDDLNIESDHDFQSDIELHPEQPRNV 527
Query: 1132 TPEAESNSEAEPSS 1145
+A S +++ P S
Sbjct: 528 LSKAVSPTDSTPPS 541
>YMT5_YEAST (Q04214) Transposon Ty1 protein B
Length = 1328
Score = 124 bits (312), Expect = 2e-27
Identities = 151/680 (22%), Positives = 292/680 (42%), Gaps = 58/680 (8%)
Query: 1061 RSKAYRVYNSETQCVEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEKY 1120
RS + +SE+ + + +K D P T E ++ D ++ ++
Sbjct: 665 RSPSIDTSSSESNSLHHVVPIKTSDTCPKENTEESIIADLPLPDLPPEPPTELSDSFKEL 724
Query: 1121 TEVES-SPEAEITPEAESNSEAEPSSKVQN--------EIASEDFQDNTQQVIQPKFKHK 1171
+ S + + +SN+ +SK ++ +++ + + + ++P K
Sbjct: 725 PPINSRQTNSSLGGIGDSNAYTTINSKKRSLEDNETEIKVSRDTWNTKNMRSLEPPRSKK 784
Query: 1172 SSHPEELIIGSK--ESPRRTRSHFRQEESLIGLLSIIEPKTVEEALSDDGWILAMQEELN 1229
H LI K +S + R+ R +E+ I K ++E + +I A +E+N
Sbjct: 785 RIH---LIAAVKAVKSIKPIRTTLRYDEA------ITYNKDIKEK---EKYIEAYHKEVN 832
Query: 1230 QFQRNDVWDLVPKPFQKNIIGTKWVFRNKL--NEQGEVTRNKARLVAQGYSQQEGIDYTE 1287
Q + WD K + + I K V + N + + T +KAR VA+G Q +
Sbjct: 833 QLLKMKTWD-TDKYYDRKEIDPKRVINSMFIFNRKRDGT-HKARFVARGDIQHPDTYDSG 890
Query: 1288 TFAPVARLEAIRLLLSYAINHGIILYQMDVKSAFLNGVIEEEVYVKQPPGFEDLKHPDHV 1347
+ A+ LS A+++ + Q+D+ SA+L I+EE+Y++ PP L D +
Sbjct: 891 MQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPP---HLGMNDKL 947
Query: 1348 YKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRKTLKKDILIVQIYVDDIIF 1407
+LKKSLYGLKQ+ WY+ + ++LIK + G + + + + + ++VDD++
Sbjct: 948 IRLKKSLYGLKQSGANWYETIKSYLIK---QCGMEEVRGWSCVFENSQVTICLFVDDMVL 1004
Query: 1408 GSSNASLCKEFSKLMQDEFEMSMMGELKFFMGIQINQSKEGVYVHQTKYTKELLKKFKLE 1467
S N + K ++ +++ ++ + IQ + + + KY K ++ E
Sbjct: 1005 FSKNLNSNKRIIDKLKMQYDTKIINLGESDEEIQYDILGLEIKYQRGKYMKLGMENSLTE 1064
Query: 1468 DCKMMNTPMHP--TCTLSKEDTGTVVDQK--------------LYRGMIGSLLYLTAS-R 1510
+N P++P + G +DQ+ + +IG Y+ R
Sbjct: 1065 KIPKLNVPLNPKGRKLSAPGQPGLYIDQQELELEEDDYKMKVHEMQKLIGLASYVGYKFR 1124
Query: 1511 PDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDY----KLIGFCDA 1566
D+L+ + A+ P + L + +++ T + L++ KS KL+ DA
Sbjct: 1125 FDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQLIWHKSKPVKPTNKLVVISDA 1184
Query: 1567 DYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQL 1626
Y G++ KS GN L +I S + + ST EAE + + L + + +
Sbjct: 1185 SY-GNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNNLSYLI 1243
Query: 1627 EDYQINANSIPIYCD--NTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQFIDT 1684
++ + + D +T +I +S N R + K +RD V L + +I+T
Sbjct: 1244 QELDKKPITKGLLTDSKSTISIIISNNE-EKFRNRFFGTKAMRLRDEVSGNHLHVCYIET 1302
Query: 1685 EHQWADIFTKPLSVERFDFI 1704
+ AD+ TKPL ++ F +
Sbjct: 1303 KKNIADVMTKPLPIKTFKLL 1322
Score = 91.7 bits (226), Expect = 2e-17
Identities = 87/374 (23%), Positives = 162/374 (43%), Gaps = 33/374 (8%)
Query: 801 HKRLGHANWRLISKISKLQLVKGLPN--------IDYHS-DALCGACQKGKIVKSSFKSK 851
H+ L HAN + I K + IDY D L G K + +K S
Sbjct: 172 HRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSRLKY 231
Query: 852 DIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFI--KSKDYACEVFS 909
++ P + LH D+FGPV+ Y + D+ +++ WV + + +D +VF+
Sbjct: 232 Q--NSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFT 289
Query: 910 SFCIQIQSEKELNILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNRVVERKNR 969
+ I+++ + ++L ++ D G E+ N F EK+GI +++ + + V ER NR
Sbjct: 290 TILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNR 349
Query: 970 TLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQ 1029
TL + RT + + L H W A+ S ++N + P +K+A + +IS
Sbjct: 350 TLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSL-ASPKSKKSARQHAGLAGLDISTLLP 408
Query: 1030 FGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVY-NSETQCVEESMHVKFDDREP 1088
FG I+N + K + G L S S Y +Y S + V+ + +V +E
Sbjct: 409 FG-QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKES 467
Query: 1089 G---------------SKTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESSPE--AEI 1131
++ + S + + + +++ + SD + +++E PE +
Sbjct: 468 RLDQFNYDALTFDEDLNRLTASYHSFIASNEIQQSNDLNIESDHDFQSDIELHPEQLRNV 527
Query: 1132 TPEAESNSEAEPSS 1145
+A S +++ P S
Sbjct: 528 LSKAVSPTDSTPPS 541
>YMD9_YEAST (Q03434) Transposon Ty1 protein B
Length = 1328
Score = 124 bits (310), Expect = 3e-27
Identities = 142/618 (22%), Positives = 266/618 (42%), Gaps = 65/618 (10%)
Query: 1116 DSEKYTEVESSPEAEITPEAESNSEAEPSSKVQNEIASEDFQDNTQQVIQPKFKHKSSHP 1175
DS YT + S + E E +++ + + + ++P K H
Sbjct: 741 DSNAYTTINSKKRSLEDNETEI------------KVSRDTWNTKNMRSLEPPRSKKRIH- 787
Query: 1176 EELIIGSK--ESPRRTRSHFRQEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQR 1233
LI K +S + R+ R +E+ I K ++E + +I A +E+NQ +
Sbjct: 788 --LIAAVKAVKSIKPIRTTLRYDEA------ITYNKDIKEK---EKYIEAYHKEVNQLLK 836
Query: 1234 NDVWDLVPKPFQKNI-----IGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTET 1288
WD +K I I + ++F K + +KAR VA+G Q +
Sbjct: 837 MKTWDTDEYYDRKEIDPKRVINSMFIFNKKRDGT-----HKARFVARGDIQHPDTYDSGM 891
Query: 1289 FAPVARLEAIRLLLSYAINHGIILYQMDVKSAFLNGVIEEEVYVKQPPGFEDLKHPDHVY 1348
+ A+ LS A+++ + Q+D+ SA+L I+EE+Y++ PP L D +
Sbjct: 892 QSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPP---HLGMNDKLI 948
Query: 1349 KLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRKTLKKDILIVQIYVDDIIFG 1408
+LKKSLYGLKQ+ WY+ + ++LIK + G + + K + + ++VDD+I
Sbjct: 949 RLKKSLYGLKQSGANWYETIKSYLIK---QCGMEEVRGWSCVFKNSQVTICLFVDDMILF 1005
Query: 1409 SSNASLCKEFSKLMQDEFEMSMMGELKFFMGIQINQSKEGVYVHQTKYTKELLKKFKLED 1468
S + + K+ ++ +++ ++ + IQ + + + KY K ++ E
Sbjct: 1006 SKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRGKYMKLGMENSLTEK 1065
Query: 1469 CKMMNTPMHP--TCTLSKEDTGTVVDQ------------KLY--RGMIGSLLYLTAS-RP 1511
+N P++P + G +DQ K++ + +IG Y+ R
Sbjct: 1066 IPKLNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYKEKVHEMQKLIGLASYVGYKFRF 1125
Query: 1512 DILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSL----DYKLIGFCDAD 1567
D+L+ + A+ P L + +++ T + L++ K+ D KL+ DA
Sbjct: 1126 DLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKPTEPDNKLVAISDAS 1185
Query: 1568 YAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLE 1627
Y G++ KS GN L +I S + + ST EAE + + L + + ++
Sbjct: 1186 Y-GNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNNLSYLIQ 1244
Query: 1628 DYQINANSIPIYCDNTAAICLSKNPILHS-RAKHIEIKHHFIRDYVQKGILDIQFIDTEH 1686
+ + D+ + I + K+ R + K +RD V L + +I+T+
Sbjct: 1245 ELNKKPIIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRDEVSGNNLYVYYIETKK 1304
Query: 1687 QWADIFTKPLSVERFDFI 1704
AD+ TKPL ++ F +
Sbjct: 1305 NIADVMTKPLPIKTFKLL 1322
Score = 92.0 bits (227), Expect = 1e-17
Identities = 87/374 (23%), Positives = 162/374 (43%), Gaps = 33/374 (8%)
Query: 801 HKRLGHANWRLISKISKLQLVKGLPN--------IDYHS-DALCGACQKGKIVKSSFKSK 851
H+ L HAN + I K + IDY D L G K + +K S
Sbjct: 172 HRMLAHANAQTIRYSLKNNTITYFNESDVDRSSAIDYQCPDCLIGKSTKHRHIKGSRLKY 231
Query: 852 DIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFI--KSKDYACEVFS 909
++ P + LH D+FGPV+ Y + D+ +++ WV + + +D +VF+
Sbjct: 232 Q--NSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFT 289
Query: 910 SFCIQIQSEKELNILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNRVVERKNR 969
+ I+++ + ++L ++ D G E+ N F EK+GI +++ + + V ER NR
Sbjct: 290 TILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNR 349
Query: 970 TLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQ 1029
TL + RT + + L H W A+ S ++N + P +K+A + +IS
Sbjct: 350 TLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSL-ASPKSKKSARQHAGLAGLDISTLLP 408
Query: 1030 FGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVY-NSETQCVEESMHVKFDDREP 1088
FG I+N + K + G L S S Y +Y S + V+ + +V +E
Sbjct: 409 FG-QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKES 467
Query: 1089 G---------------SKTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESSPE--AEI 1131
++ + +S + + + + + + SD + +++E PE +
Sbjct: 468 RLDQFNYDALTFDEDLNRLTASYQSFIASNEIQQSDDLNIESDHDFQSDIELHPEQPRNV 527
Query: 1132 TPEAESNSEAEPSS 1145
+A S +++ P S
Sbjct: 528 LSKAVSPTDSTPPS 541
>YJZ7_YEAST (P47098) Transposon Ty1 protein B
Length = 1755
Score = 122 bits (305), Expect = 1e-26
Identities = 142/618 (22%), Positives = 265/618 (41%), Gaps = 65/618 (10%)
Query: 1116 DSEKYTEVESSPEAEITPEAESNSEAEPSSKVQNEIASEDFQDNTQQVIQPKFKHKSSHP 1175
DS YT + S + E E +++ + + + ++P K H
Sbjct: 1168 DSNAYTTINSKKRSLEDNETEI------------KVSRDTWNTKNMRSLEPPRSKKRIH- 1214
Query: 1176 EELIIGSK--ESPRRTRSHFRQEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQR 1233
LI K +S + R+ R +E+ I K ++E + +I A +E+NQ +
Sbjct: 1215 --LIAAVKAVKSIKPIRTTLRYDEA------ITYNKDIKEK---EKYIEAYHKEVNQLLK 1263
Query: 1234 NDVWDLVPKPFQKNI-----IGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTET 1288
WD +K I I + ++F K + +KAR VA+G Q T
Sbjct: 1264 MKTWDTDEYYDRKEIDPKRVINSMFIFNKKRDGT-----HKARFVARGDIQHPDTYDTGM 1318
Query: 1289 FAPVARLEAIRLLLSYAINHGIILYQMDVKSAFLNGVIEEEVYVKQPPGFEDLKHPDHVY 1348
+ A+ LS A+++ + Q+D+ SA+L I+EE+Y++ PP L D +
Sbjct: 1319 QSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPP---HLGMNDKLI 1375
Query: 1349 KLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRKTLKKDILIVQIYVDDIIFG 1408
+LKKS YGLKQ+ WY+ + ++LIK + G + + K + + ++VDD+I
Sbjct: 1376 RLKKSHYGLKQSGANWYETIKSYLIK---QCGMEEVRGWSCVFKNSQVTICLFVDDMILF 1432
Query: 1409 SSNASLCKEFSKLMQDEFEMSMMGELKFFMGIQINQSKEGVYVHQTKYTKELLKKFKLED 1468
S + + K+ ++ +++ ++ + IQ + + + KY K ++ E
Sbjct: 1433 SKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRGKYMKLGMENSLTEK 1492
Query: 1469 CKMMNTPMHP--TCTLSKEDTGTVVDQ------------KLY--RGMIGSLLYLTAS-RP 1511
+N P++P + G +DQ K++ + +IG Y+ R
Sbjct: 1493 IPKLNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYKEKVHEMQKLIGLASYVGYKFRF 1552
Query: 1512 DILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSL----DYKLIGFCDAD 1567
D+L+ + A+ P L + +++ T + L++ K+ D KL+ DA
Sbjct: 1553 DLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKPTEPDNKLVAISDAS 1612
Query: 1568 YAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLE 1627
Y G++ KS GN L +I S + + ST EAE + + L + + ++
Sbjct: 1613 Y-GNQPYYKSQIGNIFLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNNLSYLIQ 1671
Query: 1628 DYQINANSIPIYCDNTAAICLSKNPILHS-RAKHIEIKHHFIRDYVQKGILDIQFIDTEH 1686
+ + D+ + I + K+ R + K +RD V L + +I+T+
Sbjct: 1672 ELNKKPIIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRDEVSGNNLYVYYIETKK 1731
Query: 1687 QWADIFTKPLSVERFDFI 1704
AD+ TKPL ++ F +
Sbjct: 1732 NIADVMTKPLPIKTFKLL 1749
Score = 93.2 bits (230), Expect = 6e-18
Identities = 87/374 (23%), Positives = 164/374 (43%), Gaps = 33/374 (8%)
Query: 801 HKRLGHANWRLISKISKLQLVKGLPN--------IDYHS-DALCGACQKGKIVKSSFKSK 851
H+ L HAN + I K + IDY D L G K + +K S
Sbjct: 599 HRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSRLKY 658
Query: 852 DIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFI--KSKDYACEVFS 909
++ P + LH D+FGPV+ Y + D+ +++ WV + + +D +VF+
Sbjct: 659 Q--NSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFT 716
Query: 910 SFCIQIQSEKELNILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNRVVERKNR 969
+ I+++ + ++L ++ D G E+ N F EK+GI +++ + + V ER NR
Sbjct: 717 TILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNR 776
Query: 970 TLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQ 1029
TL + RT + + L H W A+ S ++N + P +K+A + +IS
Sbjct: 777 TLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSL-ASPKSKKSARQHAGLAGLDISTLLP 835
Query: 1030 FGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVY-NSETQCVEESMHVKFDDREP 1088
FG I+N + K + G L S S Y +Y S + V+ + +V +E
Sbjct: 836 FG-QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKES 894
Query: 1089 G---------------SKTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESSPE--AEI 1131
++ + +S + + +++++ + SD + +++E PE +
Sbjct: 895 RLDQFNYDALTFDEDLNRLTASYQSFIASNEIQESNDLNIESDHDFQSDIELHPEQPRNV 954
Query: 1132 TPEAESNSEAEPSS 1145
+A S +++ P S
Sbjct: 955 LSKAVSPTDSTPPS 968
>YJZ9_YEAST (P47100) Transposon Ty1 protein B
Length = 1755
Score = 121 bits (304), Expect = 1e-26
Identities = 142/619 (22%), Positives = 266/619 (42%), Gaps = 67/619 (10%)
Query: 1116 DSEKYTEVESSPEAEITPEAESNSEAEPSSKVQNEIASEDFQDNTQQVIQPKFKHKSSHP 1175
DS YT + S + E E +++ + + + ++P K H
Sbjct: 1168 DSNAYTTINSKKRSLEDNETEI------------KVSRDTWNTKNMRSLEPPRSKKRIH- 1214
Query: 1176 EELIIGSK--ESPRRTRSHFRQEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQR 1233
LI K +S + R+ R +E+ I K ++E + +I A +E+NQ +
Sbjct: 1215 --LIAAVKAVKSIKPIRTTLRYDEA------ITYNKDIKEK---EKYIEAYHKEVNQLLK 1263
Query: 1234 NDVWDLVPKPFQKNI-----IGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTET 1288
WD +K I I + ++F K + +KAR VA+G Q +
Sbjct: 1264 MKTWDTDEYYDRKEIDPKRVINSMFIFNKKRDGT-----HKARFVARGDIQHPDTYDSGM 1318
Query: 1289 FAPVARLEAIRLLLSYAINHGIILYQMDVKSAFLNGVIEEEVYVKQPPGFEDLKHPDHVY 1348
+ A+ LS A+++ + Q+D+ SA+L I+EE+Y++ PP L D +
Sbjct: 1319 QSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPP---HLGMNDKLI 1375
Query: 1349 KLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRKTLKKDILIVQIYVDDIIFG 1408
+LKKSLYGLKQ+ WY+ + ++LI+ + G + + K + + ++VDD++
Sbjct: 1376 RLKKSLYGLKQSGANWYETIKSYLIQ---QCGMEEVRGWSCVFKNSQVTICLFVDDMVLF 1432
Query: 1409 SSNASLCKEFSKLMQDEFEMSMMGELKFFMGIQINQSKEGVYVHQTKYTKELLKKFKLED 1468
S N + K + ++ +++ ++ + IQ + + + KY K ++ E
Sbjct: 1433 SKNLNSNKRIIEKLKMQYDTKIINLGESDEEIQYDILGLEIKYQRGKYMKLGMENSLTEK 1492
Query: 1469 CKMMNTPMHP--TCTLSKEDTGTVVDQK--------------LYRGMIGSLLYLTAS-RP 1511
+N P++P + G +DQ+ + +IG Y+ R
Sbjct: 1493 IPKLNVPLNPKGRKLSAPGQPGLYIDQQELELEEDDYKMKVHEMQKLIGLASYVGYKFRF 1552
Query: 1512 DILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDY----KLIGFCDAD 1567
D+L+ + A+ P + L + +++ T + L++ KS KL+ DA
Sbjct: 1553 DLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQLIWHKSKPVKPTNKLVVISDAS 1612
Query: 1568 YAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLE 1627
Y G++ KS GN L +I S + + ST EAE + + L + + ++
Sbjct: 1613 Y-GNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNNLSYLIQ 1671
Query: 1628 DYQINANSIPIYCD--NTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQFIDTE 1685
+ + + D +T +I +S N R + K +RD V L + +I+T+
Sbjct: 1672 ELDKKPITKGLLTDSKSTISIIISNNE-EKFRNRFFGTKAMRLRDEVSGNHLHVCYIETK 1730
Query: 1686 HQWADIFTKPLSVERFDFI 1704
AD+ TKPL ++ F +
Sbjct: 1731 KNIADVMTKPLPIKTFKLL 1749
Score = 92.0 bits (227), Expect = 1e-17
Identities = 87/374 (23%), Positives = 162/374 (43%), Gaps = 33/374 (8%)
Query: 801 HKRLGHANWRLISKISKLQLVKGLPN--------IDYHS-DALCGACQKGKIVKSSFKSK 851
H+ L HAN + I K + IDY D L G K + +K S
Sbjct: 599 HRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSRLKY 658
Query: 852 DIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFI--KSKDYACEVFS 909
++ P + LH D+FGPV+ Y + D+ +++ WV + + +D +VF+
Sbjct: 659 Q--NSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFT 716
Query: 910 SFCIQIQSEKELNILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNRVVERKNR 969
+ I+++ + ++L ++ D G E+ N F EK+GI +++ + + V ER NR
Sbjct: 717 TILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNR 776
Query: 970 TLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQ 1029
TL + RT + + L H W A+ S ++N + P +K+A + +IS
Sbjct: 777 TLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSL-ASPKSKKSARQHAGLAGLDISTLLP 835
Query: 1030 FGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVY-NSETQCVEESMHVKFDDREP 1088
FG I+N + K + G L S S Y +Y S + V+ + +V +E
Sbjct: 836 FG-QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKES 894
Query: 1089 G---------------SKTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESSPE--AEI 1131
++ + +S + + + + + + SD + +++E PE +
Sbjct: 895 RLDQFNYDALTFDEDLNRLTASYQSFIASNEIQQSDDLNIESDHDFQSDIELHPEQPRNV 954
Query: 1132 TPEAESNSEAEPSS 1145
+A S +++ P S
Sbjct: 955 LSKAVSPTDSTPPS 968
>YJL3_YEAST (P47024) Transposon Ty4 207.7 kDa hypothetical protein
Length = 1803
Score = 118 bits (296), Expect = 1e-25
Identities = 160/662 (24%), Positives = 269/662 (40%), Gaps = 61/662 (9%)
Query: 1082 KFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEKYTE--VESSPEAEITPEAESNS 1139
KF+ E + TD E + K T+ V + ++P E N
Sbjct: 1139 KFEKENHHPPPIEDIVDMSDQTDMESNCQDGNNLKELKVTDKNVPTDNGTNVSPRLEQNI 1198
Query: 1140 EAEPSSKVQNEIASEDFQDNTQQVIQPKFKHKSSHPEELIIGSKESPRRTRSHFRQEESL 1199
EA S VQ + F + + K K K H + + S E R + + L
Sbjct: 1199 EAS-GSPVQT-VNKSAFLNKEFSSLNMKRKRKR-HDKNNSLTSYELERDKKRSKKNRVKL 1255
Query: 1200 I--GLLSIIEPKT----VEEALSDDG-------WILAMQEELNQFQRNDVWDLVPKPFQK 1246
I + ++ PK EA+S + + A +EL + V+D+ K +
Sbjct: 1256 IPDNMETVSAPKIRAIYYNEAISKNPDLKEKHEYKQAYHKELQNLKDMKVFDVDVKYSRS 1315
Query: 1247 NIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAI 1306
I V N + + KAR+V +G +Q Y+ I++ L A
Sbjct: 1316 EIPDNLIVPTNTIFTKKRNGIYKARIVCRGDTQSPDT-YSVITTESLNHNHIKIFLMIAN 1374
Query: 1307 NHGIILYQMDVKSAFLNGVIEEEVYVKQPPGFEDLKHPDH-VYKLKKSLYGLKQAPRAWY 1365
N + + +D+ AFL +EEE+Y+ P H V KL K+LYGLKQ+P+ W
Sbjct: 1375 NRNMFMKTLDINHAFLYAKLEEEIYIPHP-------HDRRCVVKLNKALYGLKQSPKEWN 1427
Query: 1366 DRLSNFLIKNDFERGQVDTTLFRKTLKKDILIVQIYVDDIIFGSSNASLCKEFSKLMQDE 1425
D L +L + L++ K L++ +YVDD + +SN EF ++
Sbjct: 1428 DHLRQYLNGIGLKDNSYTPGLYQTEDKN--LMIAVYVDDCVIAASNEQRLDEFINKLKSN 1485
Query: 1426 FEMSMMGEL------KFFMGIQINQSKEGVYVHQT----------KYTKELLKKFKLEDC 1469
FE+ + G L +G+ + +K + T KY +E LKK +
Sbjct: 1486 FELKITGTLIDDVLDTDILGMDLVYNKRLGTIDLTLKSFINRMDKKYNEE-LKKIRKSSI 1544
Query: 1470 KMMNT----PMHPTCTLSKED--TGTVVDQKLYRGMIGSLLYLT-ASRPDILFSVCLCAR 1522
M+T P +S+E+ G + Q+L +G L Y+ R DI F+V AR
Sbjct: 1545 PHMSTYKIDPKKDVLQMSEEEFRQGVLKLQQL----LGELNYVRHKCRYDIEFAVKKVAR 1600
Query: 1523 FQSDPRESHLTAVKRIFRYLKGTTNLGLLYRK--SLDYKLIGFCDADYAGDRIERKSTSG 1580
+ P E + +I +YL ++G+ Y + + D K+I DA G + +S G
Sbjct: 1601 LVNYPHERVFYMIYKIIQYLVRYKDIGIHYDRDCNKDKKVIAITDAS-VGSEYDAQSRIG 1659
Query: 1581 NCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDY-QINANSIPIY 1639
+ G N+ + S + +S+ EAE + +K L++ + + N I +
Sbjct: 1660 VILWYGMNIFNVYSNKSTNRCVSSTEAELHAIYEGYADSETLKVTLKELGEGDNNDIVMI 1719
Query: 1640 CDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQFIDTEHQWADIFTKPLSVE 1699
D+ AI + K IK I++ +++ + + I + AD+ TKP+S
Sbjct: 1720 TDSKPAIQGLNRSYQQPKEKFTWIKTEIIKEKIKEKSIKLLKITGKGNIADLLTKPVSAS 1779
Query: 1700 RF 1701
F
Sbjct: 1780 DF 1781
Score = 74.3 bits (181), Expect = 3e-12
Identities = 91/385 (23%), Positives = 161/385 (41%), Gaps = 33/385 (8%)
Query: 646 VLNDQKLLSIHPKVCLRAREKQRSWYLDSGCSRHMTGEKALFLTLTMKDGGEVKFG--GN 703
V N+QK + K + ++ +D+G ++T +K L + FG N
Sbjct: 388 VQNEQKSWNKTQKRSNKVYNSKKLVIIDTGSGVNITNDKTLLHNYEDSNRSTRFFGIGKN 447
Query: 704 QTGKIIGTG--TIGNSSISINNVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNK-- 759
+ + G G I N + +N L+ S C YD+ KT L K
Sbjct: 448 SSVSVKGYGYIKIKNGHNNTDNKCLLTYYVPEEESTIISC---YDLA-KKTKMVLSRKYT 503
Query: 760 --DDKSITFKGKRVENVYKINFSDLA-----DQKVVCL-------LSMNDKKWVW---HK 802
+K I K K V V + ++L D K+ + +N + HK
Sbjct: 504 RLGNKIIKIKTKIVNGVIHVKMNELIERPSDDSKINAIKPTSSPGFKLNKRSITLEDAHK 563
Query: 803 RLGHANWRLI-SKISKLQLVKGLPNIDYHSDALCGACQKGKIVKSSFKSKDIVSTS---R 858
R+GH + I + I + L I ++ C C+ K K + + + + S
Sbjct: 564 RMGHTGIQQIENSIKHNHYEESLDLIKEPNEFWCQTCKISKATKRNHYTGSMNNHSTDHE 623
Query: 859 PLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRW--TWVKFIKSKDYACEVFSSFCIQIQ 916
P +D+FGPV++++ +Y L++VD+ +R+ T F K+ + ++
Sbjct: 624 PGSSWCMDIFGPVSSSNADTKRYMLIMVDNNTRYCMTSTHFNKNAETILAQVRKNIQYVE 683
Query: 917 SEKELNILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNRVVERKNRTLQEMAR 976
++ + + ++ SD G EF N+ E + GI H +S + N ER RT+ A
Sbjct: 684 TQFDRKVREINSDRGTEFTNDQIEEYFISKGIHHILTSTQDHAANGRAERYIRTIITDAT 743
Query: 977 TMIHENNLAKHFWAEAVNTSCYIQN 1001
T++ ++NL FW AV ++ I+N
Sbjct: 744 TLLRQSNLRVKFWEYAVTSATNIRN 768
>M820_ARATH (P92520) Hypothetical mitochondrial protein AtMg00820
(ORF170)
Length = 170
Score = 110 bits (275), Expect = 3e-23
Identities = 53/99 (53%), Positives = 68/99 (68%)
Query: 1207 EPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPFQKNIIGTKWVFRNKLNEQGEVT 1266
EPK+V AL D GW AMQEEL+ RN W LVP P +NI+G KWVF+ KL+ G +
Sbjct: 27 EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86
Query: 1267 RNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYA 1305
R KARLVA+G+ Q+EGI + ET++PV R IR +L+ A
Sbjct: 87 RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125
>ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog
(X-linked nuclear protein-1)
Length = 1359
Score = 64.7 bits (156), Expect = 2e-09
Identities = 74/276 (26%), Positives = 120/276 (42%), Gaps = 35/276 (12%)
Query: 231 NEHETSKKSKSIALPSKGKTSKSSKAYKASESEEESPDGDSDE-----DQSVKMAMLSNK 285
+E E KKSKS + K KS K S SE+E D + ++ + K S
Sbjct: 96 DEEEDRKKSKSKKKVDQKKKEKSKKKRTTSSSEDEDSDEEREQKSKKKSKKTKKQTSSES 155
Query: 286 LEYLARKQKKFLSKRGSYKNFKK---------EDQKGCFNCKKPGHFIADCPDLQKEKFK 336
E ++K SK+ K+ KK ED+K KK K+K K
Sbjct: 156 SEESEEERKVKKSKKNKEKSVKKRAETSEESDEDEKPSKKSKKG----------LKKKAK 205
Query: 337 GKSKKSSFNSSKFRKQIKKSLMATWEDLDSESGSDKEEADDDAKAAVGLVATVSSEAVSE 396
+S+ S + + +K KKS ++ +SE +EA + K + SSE SE
Sbjct: 206 SESESESEDEKEVKKSKKKSKKVVKKESESE-----DEAPEKKKTEKRKRSKTSSEESSE 260
Query: 397 AE-SDSEDENEVYSKIPRQELVDSLKELLSLFEHRTNELTDLKEKYVDLMKQQKSTLLKL 455
+E SD E+E + S P+++ ++K+L S E +++ L +K K+ TL+
Sbjct: 261 SEKSDEEEEEKESSPKPKKKKPLAVKKLSSDEESEESDVEVLPQK----KKRGAVTLISD 316
Query: 456 KASEEELKGFNLISATYEDRLKSLCQKLQEKCDKGS 491
E++ K + S E+++ K QE + GS
Sbjct: 317 SEDEKDQKSESEAS-DVEEKVSKKKAKKQESSESGS 351
Score = 56.6 bits (135), Expect = 6e-07
Identities = 102/437 (23%), Positives = 176/437 (39%), Gaps = 52/437 (11%)
Query: 207 EAKDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKTSKSSKAYKASESEEES 266
E D + + EDL + ++ + K K + +K KAS SEE+
Sbjct: 9 EDSDGHVIEDEDLEMARQIENERKEKRAQKLKEKREREGKPPPKKRPAKKRKASSSEEDD 68
Query: 267 PDGDSDEDQSVKMAMLSNKLEYLARKQKKFLSKRGSYKNFKKEDQKGCFNCKKPGHFIA- 325
D + +S K + K E + + + ++ S K+ KK DQK KK +
Sbjct: 69 DDEEESPRKSSKKSRKRAKSESESDESDEEEDRKKS-KSKKKVDQKKKEKSKKKRTTSSS 127
Query: 326 ---DCPDLQKEKFKGKSKKS-------SFNSSKFRKQIKKSLMATWEDLDSESGSDKEEA 375
D + +++K K KSKK+ S S+ +++KKS E + EE+
Sbjct: 128 EDEDSDEEREQKSKKKSKKTKKQTSSESSEESEEERKVKKS-KKNKEKSVKKRAETSEES 186
Query: 376 DDDAKAAVGLVATVSSEAVSEAESDSEDENEVYSKIPRQELVDSLKELLSLFEHRTNELT 435
D+D K + + +A SE+ES+SEDE EV + + V KE S E + T
Sbjct: 187 DEDEKPSKKSKKGLKKKAKSESESESEDEKEVKKSKKKSKKVVK-KESESEDEAPEKKKT 245
Query: 436 DLKEKYVDLMKQQKSTLLKLKASEEELKGFNLISATYEDRLKSLCQKLQEKCDKGSGNKH 495
+ K K ++ S K EEE + S+ + K L K K S ++
Sbjct: 246 E-KRKRSKTSSEESSESEKSDEEEEEKE-----SSPKPKKKKPLAVK------KLSSDEE 293
Query: 496 EIALDDFIMAGIDRSKVASMIYNTYKNKGKGIGYSEEKSKEYSLKSYCDCIKDGLKSTFV 555
D ++ + ++I ++ K ++KS+ +++ V
Sbjct: 294 SEESDVEVLPQKKKRGAVTLISDSEDEK-------DQKSES--------------EASDV 332
Query: 556 PEGTNAKTAVQSKPEASGSQAKITSKPENLKIKVMTKSVPKSQKITILKRSETVHQNLI- 614
E + K A + + SGS + S N K K K P+ +K I+ S + + I
Sbjct: 333 EEKVSKKKAKKQESSESGSDSSEGSITVNRKSK--KKEKPEKKKKGIIMDSSKLQKETID 390
Query: 615 --KPESKIPKQKDQKNK 629
+ E + K+ ++K K
Sbjct: 391 AERAEKERRKRLEKKQK 407
Score = 43.1 bits (100), Expect = 0.007
Identities = 83/414 (20%), Positives = 157/414 (37%), Gaps = 44/414 (10%)
Query: 262 SEEESPDGDSDEDQSVKMA--MLSNKLEYLARKQKKFLSKRG----------------SY 303
SE E DG ED+ ++MA + + + E A+K K+ + G S
Sbjct: 6 SESEDSDGHVIEDEDLEMARQIENERKEKRAQKLKEKREREGKPPPKKRPAKKRKASSSE 65
Query: 304 KNFKKEDQKGCFNCKK-----PGHFIADCPDLQKEKFKGKSKKSSFNSSKFRKQIKKSLM 358
++ E++ + KK +D D ++++ K KSKK + K K KK
Sbjct: 66 EDDDDEEESPRKSSKKSRKRAKSESESDESDEEEDRKKSKSKK-KVDQKKKEKSKKKRTT 124
Query: 359 ATWEDLDSESGSDKEEADDDAKAAVGLVATVSSEAVSEAESDSEDENEVYSKIPRQELVD 418
++ ED DS+ +++ K + SE+ +SE+E +V K ++
Sbjct: 125 SSSEDEDSDEEREQKSKKKSKK--------TKKQTSSESSEESEEERKV--KKSKKNKEK 174
Query: 419 SLKELLSLFEHRTNELTDLKEKYVDLMKQQKSTLLKLKASEEELKGFNLISATYEDRLKS 478
S+K+ E + K+ L K+ KS E+E+K S +
Sbjct: 175 SVKKRAETSEESDEDEKPSKKSKKGLKKKAKSESESESEDEKEVKKSKKKSKKVVKKESE 234
Query: 479 LCQKLQEKCDKGSGNKHEIALDDFIMAGIDRSKVASMIYNTYKNKGKGIGYSEEKSKEYS 538
+ EK + + + ++ + + + K K + + S E S
Sbjct: 235 SEDEAPEKKKTEKRKRSKTSSEESSESEKSDEEEEEKESSPKPKKKKPLAVKKLSSDEES 294
Query: 539 LKSYCDCIKDGLKS---TFVPEGTNAKTAVQSKPEASGSQAKITSKPENLKIKVMTKSVP 595
+S + + K T + + + K +S+ EAS + K++ K + + S
Sbjct: 295 EESDVEVLPQKKKRGAVTLISDSEDEKDQ-KSESEASDVEEKVSKKKAKKQESSESGSDS 353
Query: 596 KSQKITILKRS------ETVHQNLIKPESKIPKQKDQKNKAATASEKTIPKGVK 643
IT+ ++S E + +I SK+ K+ +A K + K K
Sbjct: 354 SEGSITVNRKSKKKEKPEKKKKGIIMDSSKLQKETIDAERAEKERRKRLEKKQK 407
Score = 38.1 bits (87), Expect = 0.21
Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 16/150 (10%)
Query: 1061 RSKAYRVYNSETQCVEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEK- 1119
+ K+ +V E++ +E+ K ++ SKTS + S + +D E+ + P +K
Sbjct: 222 KKKSKKVVKKESESEDEAPEKKKTEKRKRSKTSSEESSESEKSDEEEEEKESSPKPKKKK 281
Query: 1120 ---YTEVESSPEAEITPEAESNSEAEPSSKVQNEIA-SEDFQDNTQQVIQPKFKHKSSHP 1175
++ S E+E ES+ E P K + + D +D Q K + ++S
Sbjct: 282 PLAVKKLSSDEESE-----ESDVEVLPQKKKRGAVTLISDSEDEKDQ----KSESEASDV 332
Query: 1176 EELIIGSKESPRRTRSHFRQEESLIGLLSI 1205
EE + SK+ ++ S +S G +++
Sbjct: 333 EEKV--SKKKAKKQESSESGSDSSEGSITV 360
Score = 36.6 bits (83), Expect = 0.61
Identities = 40/163 (24%), Positives = 72/163 (43%), Gaps = 20/163 (12%)
Query: 1048 AKAQRGIFLGYSERSKAYRVYNSETQCVEESMHVKFDDREPGSKTSEQSESNAGTTDSED 1107
+K+++ + E+SK R +S E+S D E K+ ++S+ T SE
Sbjct: 104 SKSKKKVDQKKKEKSKKKRTTSSSED--EDS------DEEREQKSKKKSKKTKKQTSSES 155
Query: 1108 ASESDQPSDSEKYTE-VESSPEAEITPEAESNSEAEPSSKVQNEI------ASEDFQDNT 1160
+ ES++ +K + E S + ES+ + +PS K + + SE ++
Sbjct: 156 SEESEEERKVKKSKKNKEKSVKKRAETSEESDEDEKPSKKSKKGLKKKAKSESESESEDE 215
Query: 1161 QQVIQPKFK-----HKSSHPEELIIGSKESPRRTRSHFRQEES 1198
++V + K K K S E+ K++ +R RS EES
Sbjct: 216 KEVKKSKKKSKKVVKKESESEDEAPEKKKTEKRKRSKTSSEES 258
Score = 34.3 bits (77), Expect = 3.0
Identities = 65/330 (19%), Positives = 126/330 (37%), Gaps = 28/330 (8%)
Query: 108 RTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYELFRMKDDESIEEMYSRF 167
R + K K T K + E +KVK++K ++ + + + + S E
Sbjct: 136 REQKSKKKSKKTKKQTSSESSEESEEERKVKKSKK----NKEKSVKKRAETSEESDEDEK 191
Query: 168 QTLVSGLQILKKSYVSSDHVSKILRSLP-SRWRPKVTAIEEAKDLNTLSVEDLVSSLKVH 226
+ S + KK+ S+ S+ + + S+ + K +E++ + + K
Sbjct: 192 PSKKSKKGLKKKAKSESESESEDEKEVKKSKKKSKKVVKKESESEDEAPEKKKTEKRKRS 251
Query: 227 EMSLNEHETSKKS-------KSIALPSKGKTSKSSKAYKASESEEESPDGDSDEDQSVKM 279
+ S E S+KS +S P K K K ESEE + + + +
Sbjct: 252 KTSSEESSESEKSDEEEEEKESSPKPKKKKPLAVKKLSSDEESEESDVEVLPQKKKRGAV 311
Query: 280 AMLSNKLEYLARKQKKFLS---KRGSYKNFKKEDQKGCFNCKKPGHFIADCPDLQKEKFK 336
++S+ + +K + S ++ S K KK++ + G + +KEK +
Sbjct: 312 TLISDSEDEKDQKSESEASDVEEKVSKKKAKKQESSESGSDSSEGSITVNRKSKKKEKPE 371
Query: 337 GKSKKSSFNSSKFRKQI----------KKSLMATWEDLDS---ESGSDKEEADDDAKAAV 383
K K +SSK +K+ +K L ++ + E G D E +
Sbjct: 372 KKKKGIIMDSSKLQKETIDAERAEKERRKRLEKKQKEFNGIVLEEGEDLTEMLTGTSSQR 431
Query: 384 GLVATVSSEAVSEAESDSEDENEVYSKIPR 413
L + V S + +S+ EV++ + R
Sbjct: 432 KLKSVVLDPDSSTVDEESKKPVEVHNSLVR 461
>M240_ARATH (P93290) Hypothetical mitochondrial protein AtMg00240
(ORF111a)
Length = 111
Score = 63.2 bits (152), Expect = 6e-09
Identities = 30/82 (36%), Positives = 48/82 (57%)
Query: 1504 LYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGF 1563
+YLT +RPD+ F+V ++F S R + + AV ++ Y+KGT GL Y + D +L F
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 1564 CDADYAGDRIERKSTSGNCQFL 1585
D+D+A R+S +G C +
Sbjct: 61 ADSDWASCPDTRRSVTGFCSLV 82
>MST2_DROHY (Q08696) Axoneme-associated protein mst101(2)
Length = 1391
Score = 61.2 bits (147), Expect = 2e-08
Identities = 103/497 (20%), Positives = 175/497 (34%), Gaps = 24/497 (4%)
Query: 185 DHVSKILRSLPSRWRPKVTAIEEAKDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIAL 244
+ ++K ++ + + K A +E + E+L +K ET+KK K +A
Sbjct: 432 EELAKNIKKAAEKKKCKEAAKKEKEAAERKKCEELAKKIKKAAEKKKCEETAKKGKEVAE 491
Query: 245 PSK--------GKTSKSSKAYKASESEEESPDGDSDEDQSVKM--AMLSNKLEYLARKQK 294
K K K K ++ E+E+ + E + K A K E A+K+K
Sbjct: 492 RKKCEELAKKIKKAEIKKKCKKLAKKEKETAEKKKCEKAAKKRKEAAEKKKCEKAAKKRK 551
Query: 295 KFLSKRGSYKNFKKEDQKG-CFNCKKPGHFIADCPDLQKEKFKGKSKKSSFNSSKFRKQI 353
+ K+ K+ KK + C+K + + +K + K +K K +
Sbjct: 552 EAAEKKKCEKSAKKRKEAAEKKKCEKAAKERKEAAEKKKCEEAAKKEKEVAERKKCEELA 611
Query: 354 KKSLMATWEDLDSESGSDKEEADDDAKAAVGLVATVSSEAVSEAESDSEDENEVYSKIPR 413
KK A + E+ ++EA + K + + + ++ E E K
Sbjct: 612 KKIKKAAEKKKCKEAAKKEKEAAEREKCGELAKKIKKAAEKKKCKKLAKKEKETAEKKKC 671
Query: 414 QELVDSLKELLSLFEHRTNELTDLKEKYVDLMKQQKSTLLKLKASEEELKGFNLISATYE 473
++ KE E + KEK K+ + K K + E K L +
Sbjct: 672 EKAAKKRKEAA---EKKKCAEAAKKEKEAAEKKKCEEAAKKEKEAAERKKCEELAKKIKK 728
Query: 474 DRLKSLCQKLQEKCDKGSGNKHEIALDDFIMAGIDRSKVASMIYNTYKNKGKGIGYSEEK 533
K C+KL +K G NK + G + K A + K ++K
Sbjct: 729 AAEKKKCKKLAKKKKAGEKNK--------LKKGNKKGKKALKEKKKCRELAKKKAAEKKK 780
Query: 534 SKEYSLKSYCDCIKDGLKSTFVPEGTNAKTAVQSKPEASGSQAKITSKPENLKIKVMTKS 593
KE + K K + T A+ K +A K E K ++
Sbjct: 781 CKEAAKKEKEAAEKKKCEKTAKKRKEEAEKKKCEKTAKKRKEAAEKKKCEKAAKKRKEEA 840
Query: 594 VPKSQKITILKRSETVHQNLIKPESKIPKQKDQKNKAATASEKTIPKGVKPKVLNDQKLL 653
K + T KR ET + + +K KQ +K K A++K K K K
Sbjct: 841 EKKKCEKTAKKRKETAEKKKCEKAAKKRKQAAEKKKCEKAAKKRKEAAEKKKCAEAAKKE 900
Query: 654 S--IHPKVCLRAREKQR 668
K C A +K++
Sbjct: 901 KELAEKKKCEEAAKKEK 917
Score = 53.1 bits (126), Expect = 6e-06
Identities = 102/475 (21%), Positives = 175/475 (36%), Gaps = 79/475 (16%)
Query: 224 KVHEMSLNEHETSKKSKSIALPSKGKT-SKSSKAYKASESEEESPDGDSDED--QSVKMA 280
K + + E ++K K K K ++ K +A++ E+E + E+ + +K A
Sbjct: 876 KCEKAAKKRKEAAEKKKCAEAAKKEKELAEKKKCEEAAKKEKEVAERKKCEELAKKIKKA 935
Query: 281 MLSNKLEYLARKQKKFLSKRGSYKNFKKEDQKGCFNCKKPGHFIADCPDLQKEKFKGKSK 340
K + LA+K+KK G KK+ KG CKK G + +K K +
Sbjct: 936 AEKKKCKKLAKKEKK----AGEKNKLKKKAGKGKKKCKKLGKKSKRAAEKKKCAEAAKKE 991
Query: 341 KSSFNSSKFRKQIKKSLMATWEDLDSESGSDKEEADDDAKAAVGLVATVSSEAVSEAESD 400
K + K ++ KK + ++K++ ++ AK + + E
Sbjct: 992 KEAATKKKCEERAKK----------QKEAAEKKQCEERAK------KLKEAAEQKQCEER 1035
Query: 401 SEDENEVYSKIPRQELVDSLKELL--SLFEHRTNELTDLKEKYVDLMKQQKSTLLKLKAS 458
++ E K +E LKE E R +L + EK KQ + K K +
Sbjct: 1036 AKKLKEAAEKKQCEERAKKLKEAAEQKQCEERAKKLKEAAEK-----KQCEERAKKEKEA 1090
Query: 459 EEELKGFNLISATYEDRLKSLCQKLQEK-CDKGSGNKHEIALDDFIMAGIDRSKVASMIY 517
E+ + E+R K L + ++K C++ + + E A R K A+
Sbjct: 1091 AEKKQ--------CEERAKKLKEAAEKKQCEERAKKEKEAAEKKRCEEAAKREKEAA--- 1139
Query: 518 NTYKNKGKGIGYSEEKSKEYSLKSYCDCIKDGLKSTFVPEGTNAKTAVQSKPEASGSQAK 577
+ K + +K KE + K C A+ A + K A +
Sbjct: 1140 -----EKKKCAEAAKKEKEATEKQKC-----------------AEAAKKEKEAAEKKKCA 1177
Query: 578 ITSKPENLKIKVMTKSVPKSQKITILKRSETVHQNLIKPESKIPKQKD--QKNKAATASE 635
+K E K + +K L + E + K E K+K+ +K K A A++
Sbjct: 1178 EAAKRE--------KEAAQKKKCADLAKKEQEPAEMKKCEEAAKKEKEAAEKQKCAKAAK 1229
Query: 636 KTIPKGVKPKVLNDQK--LLSIHPKVCLRAREKQRSWYLDSGCSRHMTGEKALFL 688
K K K K + K C A +K++ C + EKA L
Sbjct: 1230 KEKEAAEKKKCAEAAKKEQEAAEKKKCAEAAKKEKEAEKKRKCEK---AEKAAAL 1281
Score = 51.2 bits (121), Expect = 2e-05
Identities = 100/456 (21%), Positives = 165/456 (35%), Gaps = 70/456 (15%)
Query: 201 KVTAIEEAKDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKTSKSSKAYKAS 260
K A EEAK + +V +K E KK K + K + K A A
Sbjct: 306 KEQAEEEAK------IRGVVKEVK---KKCKEKALKKKCKDLGRKMKEEAEKKKCAALAK 356
Query: 261 ESEEESPDGDSDE-DQSVKMAMLSNKLEYLARKQKKFLSKRGSYKNFKKEDQKGCFNCKK 319
+ +EE E + K A K E A K+KK K+ K K ++K KK
Sbjct: 357 KQKEEDEKKACKELAKKKKEADEKKKCEEAANKEKKAAEKKKCEKAAK--ERKEAAEKKK 414
Query: 320 PGHFIADCPDLQKEKFKGKSKKSSFNSSKFRKQIKKSLMATWEDLDSESGSDKEEADDDA 379
C + K++ + +K + K IKK+ E + + KE+ +
Sbjct: 415 -------CEEAAKKEKEAAERK---KCEELAKNIKKAA----EKKKCKEAAKKEKEAAER 460
Query: 380 KAAVGLVATVSSEA-VSEAESDSEDENEVYSKIPRQELVDSLKELLSLFEHRTNELTDLK 438
K L + A + E ++ EV + +EL +K+ ++K
Sbjct: 461 KKCEELAKKIKKAAEKKKCEETAKKGKEVAERKKCEELAKKIKK------------AEIK 508
Query: 439 EKYVDLMKQQKSTLLKLKASEEELKGFNLISATYEDRLKSLCQKL---------QEKCDK 489
+K L K++K T K K + K E K C+K ++KC+K
Sbjct: 509 KKCKKLAKKEKETAEKKKCEKAAKK-------RKEAAEKKKCEKAAKKRKEAAEKKKCEK 561
Query: 490 GSGNKHEIALDDFIMAGIDRSKVASMIYNTYKNKGKGIGYSEEKSKEYSLKSYCDCIKDG 549
+ + E A K A+ + K + +K KE + + C+ +
Sbjct: 562 SAKKRKEAAEKKKCEKAAKERKEAA--------EKKKCEEAAKKEKEVAERKKCEELAKK 613
Query: 550 LKSTFVPEGTNAKTAVQSKPEASGSQAKITSKPENLKIKVMTKSVPKSQKITILKRSETV 609
+K E K A + + EA+ + K L K+ + K K K ET
Sbjct: 614 IKK--AAEKKKCKEAAKKEKEAAERE-----KCGELAKKIKKAAEKKKCKKLAKKEKETA 666
Query: 610 HQNLIKPESKIPKQKDQKNKAATASEKTIPKGVKPK 645
+ + +K K+ +K K A A++K K K
Sbjct: 667 EKKKCEKAAKKRKEAAEKKKCAEAAKKEKEAAEKKK 702
Score = 48.5 bits (114), Expect = 2e-04
Identities = 101/495 (20%), Positives = 185/495 (36%), Gaps = 61/495 (12%)
Query: 217 EDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKTSKSSKAYKASESEEESPDGDSDED-- 274
ED + K E + KK + A K K ++ K KA++ +E+ + E+
Sbjct: 361 EDEKKACKELAKKKKEADEKKKCEEAANKEK-KAAEKKKCEKAAKERKEAAEKKKCEEAA 419
Query: 275 QSVKMAMLSNKLEYLARKQKKFLSKRGSYKNFKKE----DQKGCFNCKKPGHFIADCPDL 330
+ K A K E LA+ KK K+ + KKE ++K C K A+
Sbjct: 420 KKEKEAAERKKCEELAKNIKKAAEKKKCKEAAKKEKEAAERKKCEELAKKIKKAAEKKKC 479
Query: 331 QKEKFKGKSKKSSFNSSKFRKQIKKS-------LMATWEDLDSESGSDKEEADDDAKAAV 383
++ KGK + K+IKK+ +A E +E ++ A +AA
Sbjct: 480 EETAKKGKEVAERKKCEELAKKIKKAEIKKKCKKLAKKEKETAEKKKCEKAAKKRKEAAE 539
Query: 384 GLVATVSSEAVSEAESDSEDENEVYSK---IPRQELVDSLKELLSLFEHRTNELTDLKEK 440
+++ EA + E + +++ + KE E + E KEK
Sbjct: 540 KKKCEKAAKKRKEAAEKKKCEKSAKKRKEAAEKKKCEKAAKERKEAAEKKKCEEAAKKEK 599
Query: 441 YVDLMKQQKSTLLKLKASEEELK--------------------GFNLISATYEDRLKSLC 480
V K+ + K+K + E+ K + A + + K L
Sbjct: 600 EVAERKKCEELAKKIKKAAEKKKCKEAAKKEKEAAEREKCGELAKKIKKAAEKKKCKKLA 659
Query: 481 QKLQE-----KCDKGSGNKHEIALDDFIMAGIDRSKVASMIYNTYKNKGKGIGYSEEKSK 535
+K +E KC+K + + E A + K A+ + K + +K K
Sbjct: 660 KKEKETAEKKKCEKAAKKRKEAAEKKKCAEAAKKEKEAA--------EKKKCEEAAKKEK 711
Query: 536 EYSLKSYCDCIKDGLKSTFVPEGTNAKTAVQSKPEASGSQAKITSKPENLKIKVMTKSVP 595
E + + C+ + +K K +K + +G + K+ K N K K K++
Sbjct: 712 EAAERKKCEELAKKIKKA----AEKKKCKKLAKKKKAGEKNKL--KKGNKKGK---KALK 762
Query: 596 KSQKITILKRSETVHQNLIKPESKIPKQKDQKNKAATASEKTIPKGVKPKVLNDQKLL-- 653
+ +K L + + + K +K K+ +K K ++K + K K K
Sbjct: 763 EKKKCRELAKKKAAEKKKCKEAAKKEKEAAEKKKCEKTAKKRKEEAEKKKCEKTAKKRKE 822
Query: 654 SIHPKVCLRAREKQR 668
+ K C +A +K++
Sbjct: 823 AAEKKKCEKAAKKRK 837
Score = 43.9 bits (102), Expect = 0.004
Identities = 91/478 (19%), Positives = 177/478 (36%), Gaps = 34/478 (7%)
Query: 201 KVTAIEEAKDLNTLS--VEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKTSKSSKAYK 258
K + E K L+ ++ K +++ E + +K+K KGK K
Sbjct: 915 KEKEVAERKKCEELAKKIKKAAEKKKCKKLAKKEKKAGEKNKLKKKAGKGKKKCKKLGKK 974
Query: 259 ASESEEESPDGDSDEDQSVKMAMLSNKLEYLARKQKKFLSKRGSYKNFKK----EDQKGC 314
+ + E+ ++ + + K A K E A+KQK+ K+ + KK +QK C
Sbjct: 975 SKRAAEKKKCAEAAKKE--KEAATKKKCEERAKKQKEAAEKKQCEERAKKLKEAAEQKQC 1032
Query: 315 FNCKKPGHFIAD---CPDLQKEKFKGKSKKSSFNSSKFRKQIKKSLMATWEDLDSESGSD 371
K A+ C + K+ + +K +K K+ + + ++
Sbjct: 1033 EERAKKLKEAAEKKQCEERAKKLKEAAEQKQCEERAKKLKEAAEKKQCEERAKKEKEAAE 1092
Query: 372 KEEADDDAKAAVGLVATVSSEAVSEAESDSEDENEVYSKIPRQELVDSLKELLSLFEHRT 431
K++ ++ AK E ++ E ++ ++ R++ K+ + +
Sbjct: 1093 KKQCEERAKKLKEAAEKKQCEERAKKEKEAAEKKRCEEAAKREKEAAEKKKCAEAAK-KE 1151
Query: 432 NELTDLKEKYVDLMKQQKSTLLKLKASEEELKGFNLISATYEDRLKSLCQKLQE-----K 486
E T+ K+K + K++K K K +E + A + + L +K QE K
Sbjct: 1152 KEATE-KQKCAEAAKKEKEAAEKKKCAEAAKRE---KEAAQKKKCADLAKKEQEPAEMKK 1207
Query: 487 CDKGSGNKHEIALDDFIMAGIDRSKVASMIYNTYK--------NKGKGIGYSEEKSKEYS 538
C++ + + E A + K A+ + + K + +K KE
Sbjct: 1208 CEEAAKKEKEAAEKQKCAKAAKKEKEAAEKKKCAEAAKKEQEAAEKKKCAEAAKKEKEAE 1267
Query: 539 LKSYCDCIKD--GLKSTFVPEGTNAK-TAVQSKPEASGSQAKITS-KPENLKIKVMTKSV 594
K C+ + LK AK A++ K +AK+ + K E K+ K
Sbjct: 1268 KKRKCEKAEKAAALKRQCAKLVIRAKEAALRKKCAIIAKKAKMAAEKKECEKLAKKAKEA 1327
Query: 595 PKSQKIT-ILKRSETVHQNLIKPESKIPKQKDQKNKAATASEKTIPKGVKPKVLNDQK 651
+ +K + K+ + +K K+ +K K K KG K K N+ +
Sbjct: 1328 IEWKKCAKLAKKKREAEKKKCAKLAKKEKEAAEKKKRCKDLAKNKKKGHKKKGRNENR 1385
Score = 40.4 bits (93), Expect = 0.042
Identities = 86/464 (18%), Positives = 162/464 (34%), Gaps = 32/464 (6%)
Query: 224 KVHEMSLNEHETSKKSKSIALPSKGKTSKSSKAYKASESEEESPDGDSDEDQSVKMAMLS 283
K E + E E +++ K L K K + K K ++++ +
Sbjct: 702 KCEEAAKKEKEAAERKKCEELAKKIKKAAEKKKCKKLAKKKKAGE--------------K 747
Query: 284 NKLEYLARKQKKFLSKRGSYKNFKKEDQKGCFNCKKPGHFIADCPDLQKEKFKGKSKKSS 343
NKL+ +K KK L ++ + K+ CK+ + + +K + K +K
Sbjct: 748 NKLKKGNKKGKKALKEKKKCRELAKKKAAEKKKCKEAAKKEKEAAEKKKCEKTAKKRKEE 807
Query: 344 FNSSKFRKQIKKSLMATWEDLDSESGSDKEEADDDAKAAVGLVATVSSEAVSEAESDSED 403
K K KK A + ++ ++E + K + + E ++
Sbjct: 808 AEKKKCEKTAKKRKEAAEKKKCEKAAKKRKEEAEKKKCEKTAKKRKETAEKKKCEKAAKK 867
Query: 404 ENEVYSKIPRQELVDSLKELLSLFEHRTNELTDLKEKYVDLMKQQKSTLLKLKASEEELK 463
+ K ++ KE E + KEK + K+ + K K E K
Sbjct: 868 RKQAAEKKKCEKAAKKRKEAA---EKKKCAEAAKKEKELAEKKKCEEAAKKEKEVAERKK 924
Query: 464 GFNLISATYEDRLKSLCQKLQEKCDKGSGNKHEIALDDFIMAGIDRSKVASMIYNTYK-N 522
L + K C+KL +K +K +G K+++ AG + K + + +
Sbjct: 925 CEELAKKIKKAAEKKKCKKLAKK-EKKAGEKNKLKK----KAGKGKKKCKKLGKKSKRAA 979
Query: 523 KGKGIGYSEEKSKEYSLKSYCDCIKDGLKSTFVPEGTNAKTAVQSKPEASGSQAKITSKP 582
+ K + +K KE + K C+ + K E + + EA+ Q + +
Sbjct: 980 EKKKCAEAAKKEKEAATKKKCE--ERAKKQKEAAEKKQCEERAKKLKEAA-EQKQCEERA 1036
Query: 583 ENLKIKVMTKSVPKSQKITILKRSETVHQNLIKPESKIPKQKDQKNKAATASEKTIPKGV 642
+ LK K + K K E Q + +K K+ +K + ++K
Sbjct: 1037 KKLKEAAEKKQCEERAK----KLKEAAEQKQCEERAKKLKEAAEKKQCEERAKKEKEAAE 1092
Query: 643 KPKVLNDQKLL--SIHPKVCLRAREKQRSWYLDSGCSRHMTGEK 684
K + K L + K C +K++ C EK
Sbjct: 1093 KKQCEERAKKLKEAAEKKQCEERAKKEKEAAEKKRCEEAAKREK 1136
>POL_FOAMV (P14350) Pol polyprotein [Contains: Reverse
transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4)
(RT); Integrase (IN)]
Length = 886
Score = 60.1 bits (144), Expect = 5e-08
Identities = 53/205 (25%), Positives = 87/205 (41%), Gaps = 28/205 (13%)
Query: 836 GACQKGKIVKSSFKSKDIV----STSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSR 891
G CQ+ I +S K+ + +P + ID GP+ + G Y LV+VD +
Sbjct: 648 GRCQQCLITNASNKASGPILRPDRPQKPFDKFFIDYIGPLPPSQ--GYLYVLVVVDGMTG 705
Query: 892 WTWVKFIKSKDYACEVFSSFCIQIQSEKELNILK-------VRSDHGGEFENEPFELFCE 944
+TW+ K+ + V K LN+L + SD G F + F + +
Sbjct: 706 FTWLYPTKAPSTSATV-----------KSLNVLTSIAIPKVIHSDQGAAFTSSTFAEWAK 754
Query: 945 KHGILHEFSSPRTPQQNRVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIY 1004
+ GI EFS+P PQ VERKN ++ + ++ W + + N Y
Sbjct: 755 ERGIHLEFSTPYHPQSGSKVERKNSDIKRLLTKLLVGRPTK---WYDLLPVVQLALNNTY 811
Query: 1005 IRPMLEKTAYELFKGRRPNISYFHQ 1029
P+L+ T ++L G N + +Q
Sbjct: 812 -SPVLKYTPHQLLFGIDSNTPFANQ 835
>RA50_NANEQ (P62135) DNA double-strand break repair rad50 ATPase
Length = 786
Score = 54.7 bits (130), Expect = 2e-06
Identities = 109/552 (19%), Positives = 204/552 (36%), Gaps = 100/552 (18%)
Query: 175 QILKKSYVSSDHVSKILRSLPSRWRPKVTAIEEAKDLNTLS-----------------VE 217
+I+ Y + ++KI+ P + + I KDL S +E
Sbjct: 129 KIIPLIYYKQNEITKIIEMDPRKRKEWFDEILGIKDLEEFSEKLKMAIKLIKTGKISRIE 188
Query: 218 DLVSSLK--VHEMSLNEHETSKKSKSIALPSKGKTSKSSKAYKASESEEE---------- 265
D + LK +++ SL E++ + + L S + K YK E++ +
Sbjct: 189 DRIKLLKAELNKKSLLENKLKNYKEKLVLLSN-ELENLEKEYKILENQYKEYLELKAKLK 247
Query: 266 SPDGDSD-------EDQSVKMAMLSNKLEYLARKQKKFLSKR------GSYKNFKKEDQK 312
S +G + E + + N +E L +K LSK+ KN KE +K
Sbjct: 248 SIEGQINNINVKEIESKINNIREELNNIEELTDYEKDILSKKHEIIRCNEIKNRLKELEK 307
Query: 313 GCFNCKKPGHFIADCPDLQKEKFKGKSKKSSFNSSKFRKQIKKSLMATWEDLDSESGSDK 372
I D ++KE + +SK + + + K L E E
Sbjct: 308 E----------IKDYDKIKKEFLEIESKYKQYEEKRLEYEKAKMLEKEKEKAKREYSYLL 357
Query: 373 EEADDDAKAAVGLVATVSSEAVSEAESDSEDENEVYSKI----PRQELVDSLKELLSL-- 426
+E + K L ++ + E E ++ E+ +I + +L++++K+ L
Sbjct: 358 KEKESLEKEIAELQNKINQ--IKELEKMEQELLEIQERIGVIKAKLKLLENIKDRCPLCG 415
Query: 427 -------FEHRTNELTDLKEKYVDLMKQQKSTLLKLKASEEELKGFNLISATYEDRLKSL 479
EH E L+++Y L ++ L+K++A E+ KG + L+++
Sbjct: 416 AKLSSDTIEHLQKEREKLQKEYYYLKEKYNQLLIKIRALEK-YKGLEKVLEAKTKHLETI 474
Query: 480 CQKLQEKCDKGSGNKHEIALDDFIMAGIDRSKVASMIYNTYKNKGKGIGYSEEKSKEYSL 539
+L+E + I I + ++ I YK + Y E K KEY
Sbjct: 475 ENRLKE-------------IKPIIELEIPKIELDESIPYKYKQLLNKVSYLEAKIKEYER 521
Query: 540 KSYCDCIKDGLKSTFVPEGTNAKTAVQSKPEASGSQAKITSKPE-NLKIKVMTKSVPKSQ 598
+C D A++ K KP ++ ++ K + +
Sbjct: 522 YKNIECPYD--------------IAIEELKRIEDKYNKYIKKPALERELNLLLKELERYN 567
Query: 599 KITILKRSETVHQNLIKPESKIPKQKDQKNKAATASEKTIPKGVKPKVLNDQKLLSIHPK 658
++LK E + L PE + ++ K K SE + KG+ ++ + K + H
Sbjct: 568 --SLLKEKEEILSKL-NPEIETKYKELTKKKENLLSEISKVKGIIKEIESQIKEIEKHES 624
Query: 659 VCLRAREKQRSW 670
+ EK+R W
Sbjct: 625 TIKQLEEKKRKW 636
>USO1_YEAST (P25386) Intracellular protein transport protein USO1
Length = 1790
Score = 53.9 bits (128), Expect = 4e-06
Identities = 122/649 (18%), Positives = 253/649 (38%), Gaps = 94/649 (14%)
Query: 6 ESTTTKYTSVKHDYDTADKKTDSGKAPKFNGDPEEFSWWKTNMYSFIMGLDE--ELWDIL 63
E+ T K ++ +++ D+K + + E FS +T + + LDE +L D+L
Sbjct: 758 ENLTEKLIALTNEHKELDEKYQILNS-SHSSLKENFSILETELKNVRDSLDEMTQLRDVL 816
Query: 64 EDGVDDLDLDEEGAAIDRRIHTPAQKKLYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAM 123
E D + + A ++ + Q+ K K I++ + E A+
Sbjct: 817 ETK----DKENQTALLEYKSTIHKQEDSIKTLEKGLETILSQKKKAEDGINKMGKDLFAL 872
Query: 124 FASLCANFEGSKKVKEAKALMLV-HQYELFRMKDDESIEEMYSRFQTLVSGLQILK---- 178
+ A E K +++ K V HQ E +K+D I + + + L+ +K
Sbjct: 873 SREMQAVEENCKNLQKEKDKSNVNHQKETKSLKED--IAAKITEIKAINENLEEMKIQCN 930
Query: 179 KSYVSSDHVSKILRSLPSRWRPKVTAIEEAKDLNTLSVEDLVSSLKVHEMSLNEHETSKK 238
+H+SK L SR++ S ++LV+ L ++K
Sbjct: 931 NLSKEKEHISKELVEYKSRFQ---------------SHDNLVAKL------------TEK 963
Query: 239 SKSIALPSKGKTSKSSKAYKASESEEESPDGDSDEDQSVKMAMLSNKLEYLARKQKKFLS 298
KS+A K +++ KA E +S + S++++ L NK++ ++++++ F
Sbjct: 964 LKSLANNYKDMQAENESLIKAVE--------ESKNESSIQLSNLQNKIDSMSQEKENFQI 1015
Query: 299 KRGSYKNFKKEDQKGCFNCKKPGHFIADCPDLQKEKFKGKSKKSSFNSSKFRKQIKKSLM 358
+RGS + N ++ I+D ++E KS + ++ QI
Sbjct: 1016 ERGSIEK----------NIEQLKKTISDLEQTKEEII----SKSDSSKDEYESQI----- 1056
Query: 359 ATWEDLDSESGSDKEEADDDAKAAVGLVATVSSEAVSEAESDSEDENEVYSKIPRQELVD 418
L E A+D+ + + E +E + +NE+ +K+ E
Sbjct: 1057 ----SLLKEKLETATTANDENVNKISELTKTREELEAELAAYKNLKNELETKLETSE--K 1110
Query: 419 SLKELLSLFEHRTNELTDLKEKYVDLMKQQKSTLLKLKASEEELKGFNLISATYEDRLKS 478
+LKE+ EH E L+++ + +Q S L++ E+E + YE+++ +
Sbjct: 1111 ALKEVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEEQIAN 1170
Query: 479 LCQKLQEKCDKGSGNKHEIALDDFIMAGIDRSKVASMIYNTYKNKGKGIGYSEEKSKEYS 538
++ E+ + L+D I + ++ + + + K + + E+
Sbjct: 1171 KERQYNEEISQ---------LNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQSNLK 1221
Query: 539 LKSYCDCIKDGLKSTFVPEGTNAKTAVQSKPEASGSQAKI----------TSKPENLKIK 588
KS D + +K TN + ++S KI + L+ K
Sbjct: 1222 -KSEIDALNLQIKELKKKNETNEASLLESIKSVESETVKIKELQDECNFKEKEVSELEDK 1280
Query: 589 VMTKSVPKSQKITILKRSETVHQNLIKPESKIPKQKDQKNKAATASEKT 637
+ S+ + + K SE + + L +++ Q ++ + A EK+
Sbjct: 1281 LKASEDKNSKYLELQKESEKIKEELDAKTTELKIQLEKITNLSKAKEKS 1329
Score = 42.0 bits (97), Expect = 0.015
Identities = 112/590 (18%), Positives = 227/590 (37%), Gaps = 58/590 (9%)
Query: 63 LEDGVDDLDLDEEGAAIDRRIHTPAQKKLYKKHHKIRGIIVASIPRTEYMKMSDKSTAKA 122
L++ +D + ++E I+R ++L K + I +++ K +S
Sbjct: 999 LQNKIDSMSQEKENFQIERGSIEKNIEQLKKTISDLEQTKEEIISKSDSSKDEYESQISL 1058
Query: 123 MFASL----CANFEGSKKVKEAKALMLVHQYELFRMKDDESIEEMYSRFQTLVSGLQILK 178
+ L AN E K+ E + EL K+ ++ E+ ++ +T L+ +K
Sbjct: 1059 LKEKLETATTANDENVNKISELTKTREELEAELAAYKNLKN--ELETKLETSEKALKEVK 1116
Query: 179 KSYVSSDHVSKILRSLPSRWRPKVTAIEEAKDLNTLSV---------EDLVSSLKVHEMS 229
++ +H+ + L A E + LN+L EDL + LK +E
Sbjct: 1117 EN---EEHLKEEKIQLEKE------ATETKQQLNSLRANLESLEKEHEDLAAQLKKYEEQ 1167
Query: 230 LNEHETSKKSKSIALPSKGKTSKSSKAYKASESEEESPDGDSDEDQSVKMAMLSNKLEYL 289
+ E + S+ + +++ E ES +DE + AM S E
Sbjct: 1168 IANKERQYNEE---------ISQLNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQS 1218
Query: 290 ARKQKKFLSKRGSYKNFKKEDQKGCFNCKKPGHFIADCPDLQKEKFKGKSKKSSFNS--- 346
K+ + + K KK+++ + ++ E K K + N
Sbjct: 1219 NLKKSEIDALNLQIKELKKKNETN------EASLLESIKSVESETVKIKELQDECNFKEK 1272
Query: 347 --SKFRKQIKKSLMATWEDLDSESGSDKEEADDDAKAAVGLVATVSSEAVSEAESDSEDE 404
S+ ++K S + L+ + S+K + + DAK + +S+A+ SE E
Sbjct: 1273 EVSELEDKLKASEDKNSKYLELQKESEKIKEELDAKTTELKIQLEKITNLSKAKEKSESE 1332
Query: 405 NEVYSKIPRQELVDSLKELLSLFEHRTNELTDLKEKYVDLMKQQKSTLLKLKASEEELKG 464
K +E ++ +E L ++ EK L+ + ST+ + + +
Sbjct: 1333 LSRLKKTSSEERKNA-EEQLEKLKNEIQIKNQAFEKERKLLNEGSSTITQEYSEKINTLE 1391
Query: 465 FNLISATYEDRLKSLCQKLQEKCDKGSGNKHEIALDDFIMAGIDRSKVASMIYNTYKNKG 524
LI E+ LK+ ++ D +++L + + ++ + S+ K
Sbjct: 1392 DELIRLQNENELKA------KEIDNTRSELEKVSLSNDELLEEKQNTIKSLQDEILSYKD 1445
Query: 525 KGIGYSEEK--SKEYSLKSYCDCIKDGLKSTFVPEGTNAKTAVQSKPEASGSQAKITSKP 582
K I ++EK S E K + +K+ L++ + + + + E+S +A++
Sbjct: 1446 K-ITRNDEKLLSIERDNKRDLESLKEQLRAAQESKAKVEEGLKKLEEESSKEKAELEKSK 1504
Query: 583 ENLKIKVMT----KSVPKSQKITILKRSETVHQNLIKPESKIPKQKDQKN 628
E +K T ++ KS TI K E + Q+ E I + +K+
Sbjct: 1505 EMMKKLESTIESNETELKSSMETIRKSDEKLEQSKKSAEEDIKNLQHEKS 1554
Score = 40.4 bits (93), Expect = 0.042
Identities = 73/356 (20%), Positives = 139/356 (38%), Gaps = 25/356 (7%)
Query: 56 DEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQ---KKLYKKHHKIRGIIVASIPRTEYM 112
DE+L I D DL+ +E + + KKL ++ K + + S + +
Sbjct: 1451 DEKLLSIERDNKRDLESLKEQLRAAQESKAKVEEGLKKLEEESSKEKAELEKSKEMMKKL 1510
Query: 113 KMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYELFRMKDD--ESIEEMYSRFQTL 170
+ + +S + +S+ + +K++++K L K D I E + L
Sbjct: 1511 ESTIESNETELKSSMETIRKSDEKLEQSKKSAEEDIKNLQHEKSDLISRINESEKDIEEL 1570
Query: 171 VSGLQILKKSYVSSDHVSKILRSLPSRWRPKVTAIEEAKDLNTLSVEDLVSSLKVHEMSL 230
S L+I KS + V + L + + K+ E + +ED+ LK + +
Sbjct: 1571 KSKLRIEAKSGSELETVKQELNNA----QEKIRINAEENTVLKSKLEDIERELKDKQAEI 1626
Query: 231 NEHETSKKSKSIALPSKGKTSKSSKAYKASESEEESPDGDSDEDQSVKMAMLSNKLEYLA 290
++ K+ + L + S++ KA +SEEE V+ + L K L
Sbjct: 1627 KSNQEEKELLTSRLKELEQELDSTQQ-KAQKSEEERRA--EVRKFQVEKSQLDEKAMLLE 1683
Query: 291 RKQKKFLSKRGSYKNFKKEDQKGCFNCKKPGHFIADCPDLQKEKFKGKSKKSSFNSSKFR 350
K ++K ++K + +K + ++ + L KE K++ S +
Sbjct: 1684 TKYNDLVNKEQAWKRDEDTVKKTTDSQRQ------EIEKLAKELDNLKAENSKLKEANED 1737
Query: 351 KQIKKSLMATWEDLDSESGSDKEEADDDAKAAVGLVATVSSEAVSEAESDSEDENE 406
+ LM DLD ++ + + D L +SS+ + E D EDE E
Sbjct: 1738 RSEIDDLMLLVTDLDEKNAKYRSKLKD-------LGVEISSDEEDDEEDDEEDEEE 1786
>GOA4_HUMAN (Q13439) Golgi autoantigen, golgin subfamily A member 4
(Trans-Golgi p230) (256 kDa golgin) (Golgin-245) (72.1
protein)
Length = 2230
Score = 53.9 bits (128), Expect = 4e-06
Identities = 116/574 (20%), Positives = 238/574 (41%), Gaps = 57/574 (9%)
Query: 138 KEAKALMLVHQYELFRMKDDES-IEEMYSRFQTLVSGLQILKKSYVSSDHVSKILRSLPS 196
+E L + Q ++++ E+ I+ M + ++LV+ + L+K + + S +
Sbjct: 1283 EEQNTLNISFQQATHQLEEKENQIKSMKADIESLVTEKEALQKEGGNQQQAASEKESCIT 1342
Query: 197 RWRPKVTAIEEAKDLNTLSVEDL------VSSLKVHEMSLN---EHETSKKSKSIALPSK 247
+ + +++ E + TL E+L +SSL LN ++ S K A+ S
Sbjct: 1343 QLKKELS---ENINAVTLMKEELKEKKVEISSLSKQLTDLNVQLQNSISLSEKEAAISSL 1399
Query: 248 GKTSKSSKAYKASESEEESPDGDSDEDQSVK-MAMLSNKLEYLARKQKKFLSKRGSYKNF 306
K K + ++ S D+ + + + + + + +KK S+ ++N
Sbjct: 1400 RKQYDEEKCELLDQVQDLSFKVDTLSKEKISALEQVDDWSNKFSEWKKKAQSRFTQHQNT 1459
Query: 307 KKEDQKGCFNCKKPGHFIADCPDLQKEKFKGKSK-----KSSFNSSKFRKQIKKSLMATW 361
KE Q K + + +L KE+ ++K K K + + K+S + T
Sbjct: 1460 VKELQIQLELKSKEAYEKDEQINLLKEELDQQNKRFDCLKGEMEDDKSKMEKKESNLET- 1518
Query: 362 EDLDSESGSDKEEADDDAKAAVGLVATVSSEAVSEAESDSEDENEVYSKIPRQELVDSLK 421
+L S++ E D + T+ E+++E + + ++ K ELV L+
Sbjct: 1519 -ELKSQTARIMELEDHITQK------TIEIESLNEVLKNYNQQKDIEHK----ELVQKLQ 1567
Query: 422 ELLSLFEHRTNELTDLKEKYVDLMKQQKSTLLKLKASEEELKGFNLISATYEDRLKSLCQ 481
L E + N + + +EK + L Q S +L+ ++EL+ NL + E+ LK+L
Sbjct: 1568 HFQELGEEKDNRVKEAEEKILTLENQVYSMKAELETKKKELEHVNLSVKSKEEELKALED 1627
Query: 482 KLQ-EKCDKGSGNKHEIALDDFIMAGIDRSKVASMIYNTYK-NKGKGIGYSEEKSKEYSL 539
+L+ E K + K + + +A I + ++ M + KG SE +K
Sbjct: 1628 RLESESAAKLAELKRKA---EQKIAAIKKQLLSQMEEKEEQYKKGTESHLSELNTKLQER 1684
Query: 540 KSYCDCIKDGLKS-------TFVPEGTNAKTAVQSKPEASGSQAKITSKPENLKIKVMTK 592
+ +++ LKS T + + A ++ E + SQ + E KI V+ +
Sbjct: 1685 EREVHILEEKLKSVESSQSETLIVPRSAKNVAAYTEQEEADSQGCVQKTYEE-KISVLQR 1743
Query: 593 SVPKSQKI---TILKRSETV----------HQNLIKPESKIPKQKDQKNKAATASEKTIP 639
++ + +K+ ++ ETV + LIK E KQ + ++ E+
Sbjct: 1744 NLTEKEKLLQRVGQEKEETVSSHFEMRCQYQERLIKLEHAEAKQHEDQSMIGHLQEELEE 1803
Query: 640 KGVKPKVLNDQKLLSIHPKVCLRAREKQRSWYLD 673
K K ++ Q + K ++A++ + + D
Sbjct: 1804 KNKKYSLIVAQHVEKEGGKNNIQAKQNLENVFDD 1837
Score = 51.6 bits (122), Expect = 2e-05
Identities = 92/457 (20%), Positives = 189/457 (41%), Gaps = 40/457 (8%)
Query: 55 LDEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKKLYKKHHKIRGIIVASIPRTEYMKM 114
L+EEL +L+D D + + E +++ H Q K H++ SI RTE
Sbjct: 703 LEEEL-SVLKDQTDKMKQELEAKMDEQKNHHQQQVDSIIKEHEV------SIQRTEKALK 755
Query: 115 SDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYELFRMKDDESIEEMYSRFQTLVSGL 174
+ + + E K +KE HQ + ++ D I+ Q + L
Sbjct: 756 DQINQLELLLK------ERDKHLKE-------HQAHVENLEAD--IKRSEGELQQASAKL 800
Query: 175 QILKKSYVSSDHV-SKILRSLPSRWRPKVTAIEEAKDLNTLSVEDLVSSLKVHEMSLNEH 233
+ + SY S+ H +K ++ + K+ +E + L T V ++ + K L+ H
Sbjct: 801 DVFQ-SYQSATHEQTKAYEEQLAQLQQKLLDLETERILLTKQVAEVEAQKKDVCTELDAH 859
Query: 234 ETSKKSKSIALPSKGKTSKSSKAYKASESEEESPDGDSDEDQSVKMAMLSNKLEYLARKQ 293
+ + L + + E + DG+ +++Q+ ++ + + R+
Sbjct: 860 KIQVQDLMQQLEKQNSEMEQKVKSLTQVYESKLEDGNKEQEQTKQILVEKENMILQMREG 919
Query: 294 KKFLSKRGSYKNFKKEDQKGCFNCKKPGHFIADCPDLQKEKFKGKSKKSSFNSSKFRKQ- 352
+K + + K KED N + F ++K K K K + + ++
Sbjct: 920 QKKEIEILTQKLSAKEDSIHILNEEYETKFKNQEKKMEKVKQKAKEMQETLKKKLLDQEA 979
Query: 353 -IKKSLMATWEDLDSESGSDKEEADDDAKA-AVGLVATVSSEAVSEAESDSEDENEVYSK 410
+KK L T +L + + + A+A + G+ S+AVS E++ +++ E ++
Sbjct: 980 KLKKELENTALELSQKEKQFNAKMLEMAQANSAGI-----SDAVSRLETNQKEQIESLTE 1034
Query: 411 IPRQELVDSLKELLSLFEHRTNELTDLKEKYVDLMKQQ----KSTLLKLKASEEELKGFN 466
+ R+EL D + + EL ++ E + +Q+ K +L +EE+
Sbjct: 1035 VHRRELNDVISIWEKKLNQQAEELQEIHEIQLQEKEQEVAELKQKILLFGCEKEEMN--K 1092
Query: 467 LISATYEDRLK--SLCQKLQEKCDKGSGNKHEIALDD 501
I+ E+ +K + +LQE+ + S + + +A D+
Sbjct: 1093 EITWLKEEGVKQDTTLNELQEQLKQKSAHVNSLAQDE 1129
Score = 42.4 bits (98), Expect = 0.011
Identities = 123/604 (20%), Positives = 243/604 (39%), Gaps = 88/604 (14%)
Query: 87 AQKKLYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLV 146
A + L ++ K++GI+ S DKS + A L + ++ K+
Sbjct: 163 AYQMLQREKKKLQGILSQS---------QDKSLRR--IAELREELQMDQQAKK------- 204
Query: 147 HQYELFRMKDDESIEEMYSRFQTLVSGLQILKKSYVSSDHVSKILRSLPS-RWRPKVTAI 205
H E F D S+EE L + + +LK+ + +L+ LP + +V
Sbjct: 205 HLQEEF----DASLEEKDQYISVLQTQVSLLKQRLRNGPMNVDVLKPLPQLEPQAEVFTK 260
Query: 206 EEAKDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKTSKSSKAYKASESEEE 265
EE + + V + +S+K E + K+ +++ K + SE+E
Sbjct: 261 EENPESDGEPVVEDGTSVKTLETL---QQRVKRQENLLKRCKETIQSHKEQCTLLTSEKE 317
Query: 266 SPDGDSDEDQSVKMAMLSNKLEYLARKQKKFLSKRGSYKNF--KKEDQKGCF--NCKKPG 321
+ DE ++ L + ++ K +++ KN + E KG K+
Sbjct: 318 ALQEQLDE----RLQELEKIKDLHMAEKTKLITQLRDAKNLIEQLEQDKGMVIAETKRQM 373
Query: 322 HFIADCPDLQKEKFKGKSKKSSFNSSKFRKQIKKSLMATWEDLDS--ESGSDKEEADDDA 379
H + + + + + + K+ + + R+Q +KS A +E+L+ + EEA
Sbjct: 374 HETLEMKEEEIAQLRSRIKQMTTQGEELREQKEKSERAAFEELEKALSTAQKTEEARRKL 433
Query: 380 KAAVGLVATVSSEAVSEAESDSEDE----NEVYSKIPRQELVDSLKELLSLFEHRTNELT 435
KA + E + E SE+E + S++ +QE+VD +K+ E + +L
Sbjct: 434 KAEM-------DEQIKTIEKTSEEERISLQQELSRV-KQEVVDVMKK---SSEEQIAKLQ 482
Query: 436 DLKEKYVDLMKQQKSTLLKLKASEEELKGFNLISATYEDRLKSLCQKLQEKCDKGSGNKH 495
L EK +L ++++ KL+ E E +++++K +K Q + K S K
Sbjct: 483 KLHEK--ELARKEQELTKKLQTRERE----------FQEQMKVALEKSQSEYLKISQEKE 530
Query: 496 EIALDDFIMAGIDRSKVASMIYNTYKNKGKGIGYSEEKSKEYSLKSYCDCIKDGLKSTFV 555
+ + + ++ K A I +NK + + E + L+ ++ L+ +
Sbjct: 531 Q--QESLALEELELQKKA--ILTESENKLRDLQQEAETYRTRILE-----LESSLEKSLQ 581
Query: 556 PEGTNAK-TAVQSKPEASGSQAKITSKPENLKIKVMT----KSVPKSQKITILKRSETVH 610
+K AV + E + +IT E K ++ + + ++K+ +LK+
Sbjct: 582 ENKNQSKDLAVHLEAEKNKHNKEITVMVEKHKTELESLKHQQDALWTEKLQVLKQQYQTE 641
Query: 611 QNLIKPESKIPKQKDQKNK-------AATASEKTIPK-GVKPKVLNDQKLLSIHPKVCLR 662
++ + + K+ K+K +EKT+ K VK L LS L+
Sbjct: 642 MEKLREKCEQEKETLLKDKEIIFQAHIEEMNEKTLEKLDVKQTELES---LSSELSEVLK 698
Query: 663 AREK 666
AR K
Sbjct: 699 ARHK 702
Score = 38.9 bits (89), Expect = 0.12
Identities = 73/387 (18%), Positives = 154/387 (38%), Gaps = 52/387 (13%)
Query: 149 YELFRMKDDESIEEMYSRFQTLVS---------------GLQILKKSYVSSDHVSKILRS 193
+E MK++E I ++ SR + + + + L+K+ ++ + R
Sbjct: 374 HETLEMKEEE-IAQLRSRIKQMTTQGEELREQKEKSERAAFEELEKALSTAQKTEEARRK 432
Query: 194 LPSRWRPKVTAIEEAKDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKTSKS 253
L + ++ IE+ + +S++ +S +K + + KKS + K +
Sbjct: 433 LKAEMDEQIKTIEKTSEEERISLQQELSRVKQEVV-----DVMKKSSEEQIAKLQKLHEK 487
Query: 254 SKAYKASESEEESPDGDSDEDQSVKMAMLSNKLEYLARKQKKFLSKRGSYKNFKKEDQKG 313
A K E ++ + + + +K+A+ ++ EYL Q+K ++ S + E QK
Sbjct: 488 ELARKEQELTKKLQTREREFQEQMKVALEKSQSEYLKISQEK--EQQESLALEELELQKK 545
Query: 314 CFNCKKPGHFIADCPDLQKE---------KFKGKSKKSSFNSSKFRKQIKKSLMATWEDL 364
+ DLQ+E + + +KS + K + L A
Sbjct: 546 AILTESENKL----RDLQQEAETYRTRILELESSLEKSLQENKNQSKDLAVHLEAEKNKH 601
Query: 365 DSESGSDKEEADDDAKAAVGLVATVSSEAVSEAESDSEDENEVYSKIPRQELVDSLKELL 424
+ E E+ + ++ + +E + + + E E + QE LK+
Sbjct: 602 NKEITVMVEKHKTELESLKHQQDALWTEKLQVLKQQYQTEMEKLREKCEQEKETLLKDKE 661
Query: 425 SLFE-------HRTNELTDLKEKYVDLMKQQKSTLLKLKAS-EEELKGFNLISATYEDRL 476
+F+ +T E D+K+ ++ + + S +LK + EEEL + +D+
Sbjct: 662 IIFQAHIEEMNEKTLEKLDVKQTELESLSSELSEVLKARHKLEEEL-------SVLKDQT 714
Query: 477 KSLCQKLQEKCDKGSGNKHEIALDDFI 503
+ Q+L+ K D+ N H+ +D I
Sbjct: 715 DKMKQELEAKMDE-QKNHHQQQVDSII 740
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.315 0.131 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 199,095,895
Number of Sequences: 164201
Number of extensions: 8697103
Number of successful extensions: 29695
Number of sequences better than 10.0: 657
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 512
Number of HSP's that attempted gapping in prelim test: 26135
Number of HSP's gapped (non-prelim): 2888
length of query: 1715
length of database: 59,974,054
effective HSP length: 124
effective length of query: 1591
effective length of database: 39,613,130
effective search space: 63024489830
effective search space used: 63024489830
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 73 (32.7 bits)
Medicago: description of AC146757.2