Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146757.12 + phase: 0 /partial
         (192 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

HS90_BRUPA (O61998) Heat shock protein 90                              31  1.5
ECT1_YEAST (P33412) Ethanolamine-phosphate cytidylyltransferase ...    30  2.6
YC47_HELPY (O25842) Protein HP1247                                     30  4.5
SYL_THEVO (Q97AN8) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine-...    30  4.5
TOLB_PASMU (Q9CM71) TolB protein precursor                             29  7.7

>HS90_BRUPA (O61998) Heat shock protein 90
          Length = 717

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 24/116 (20%), Positives = 52/116 (44%), Gaps = 18/116 (15%)

Query: 95  LIDGINQSEARRRALVLLCFVYMNTNAKDAYVTSVDRKGFDVL----------------- 137
           L D +++ +  ++ +  +        A  A+V  V R+GF+V+                 
Sbjct: 459 LKDYVSRMKENQKQIYFITGESREAVASSAFVERVKRRGFEVIYMTDPIDEYCVQQLKEY 518

Query: 138 -AKVTGPVSKDGVGQYQWKELRFMFEQEANDVETFCQHLVQMEEEVIKKVSASSGL 192
             K    V+K+G+   + +E +  FE++    E  C+ +  + E+ ++KV+ S+ L
Sbjct: 519 DGKKLVSVTKEGLELPESEEEKKKFEEDKVKFENLCKVMKDILEKKVEKVAVSNRL 574


>ECT1_YEAST (P33412) Ethanolamine-phosphate cytidylyltransferase (EC
           2.7.7.14) (Phosphorylethanolamine transferase)
           (CTP:phosphoethanolamine cytidylyltransferase)
          Length = 323

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 31/111 (27%), Positives = 48/111 (42%), Gaps = 11/111 (9%)

Query: 56  YRFKTRSCTFIDGHGGTFDV-NIEDLGTSKADLLAPFSAKLIDGINQSE-------ARRR 107
           Y+F    C ++DG    F + +I+ L   K DL      KLI GI  S+        + R
Sbjct: 192 YKFDAEDCVYVDGDFDLFHMGDIDQLRKLKMDLHP--DKKLIVGITTSDYSSTIMTMKER 249

Query: 108 ALVLLCFVYMNTNAKDAYVTSVDRKGFDVLAKVTGPVSKDG-VGQYQWKEL 157
            L +L   Y++    DA  TS+ +   +     T  ++  G   +Y  KEL
Sbjct: 250 VLSVLSCKYVDAVIIDADATSMSQYNCEKYHIGTAVLTAAGKFSEYLTKEL 300


>YC47_HELPY (O25842) Protein HP1247
          Length = 340

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 29/133 (21%), Positives = 54/133 (39%), Gaps = 14/133 (10%)

Query: 19  TRKFSYTVSGVLSSGGSSTSRSDNLQKLLEVTEKYSVYRFKTRSCTF----IDGH--GGT 72
           T K+ YT   ++     S  + + +     + + +   +F      F    I GH     
Sbjct: 120 TTKYKYTSDAIVKFFQKSPLKDEAICARFFIPKTWESLKFLQERANFLHLDISGHLLNAL 179

Query: 73  FDVNIEDLGTSKAD------LLAPFSAKLIDGINQSEARRRALVLLCFVYMNTNAKDA-- 124
           F++N EDLG S  D      L AP + + I  ++ +        L+  +++  +A D   
Sbjct: 180 FEINNEDLGVSFNDLDKLAVLNAPITLEDIQELSSNAGDMDLQKLILGLFLKKSALDIYD 239

Query: 125 YVTSVDRKGFDVL 137
           Y+    +K  D+L
Sbjct: 240 YLLKEGKKDADIL 252


>SYL_THEVO (Q97AN8) Leucyl-tRNA synthetase (EC 6.1.1.4)
           (Leucine--tRNA ligase) (LeuRS)
          Length = 910

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 16/35 (45%), Positives = 25/35 (70%), Gaps = 3/35 (8%)

Query: 26  VSGVLSSGGSSTSRSD-NLQKLLEVTEKYS--VYR 57
           +SG++ S G+  S+S  N+  LLE+T+KYS  +YR
Sbjct: 601 ISGLVVSNGAKISKSKGNVVSLLEITKKYSADIYR 635


>TOLB_PASMU (Q9CM71) TolB protein precursor
          Length = 432

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 20/89 (22%)

Query: 48  EVTEKYSVYR--FKTRSCTFIDGHGGT--FDVNIEDLGTSKADLLAPFSAKLIDGINQSE 103
           EV EK +  R  F+TR    +  HGG+  ++V + D                 DG NQ  
Sbjct: 156 EVFEKLTGIRGAFRTRIAYIVQKHGGSQPYEVRVSDY----------------DGFNQFV 199

Query: 104 ARRRALVLLCFVYMNTNAKDAYVTSVDRK 132
             R A  L+   + +   K AYV+  ++K
Sbjct: 200 VNRSAQPLMSPAWSHDGKKLAYVSFENKK 228


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.316    0.131    0.362 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,380,542
Number of Sequences: 164201
Number of extensions: 774420
Number of successful extensions: 2473
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2472
Number of HSP's gapped (non-prelim): 5
length of query: 192
length of database: 59,974,054
effective HSP length: 104
effective length of query: 88
effective length of database: 42,897,150
effective search space: 3774949200
effective search space used: 3774949200
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)


Medicago: description of AC146757.12