BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146756.7 - phase: 0
(96 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
PSA6_TOBAC (Q9XG77) Proteasome subunit alpha type 6 (EC 3.4.25.1... 166 9e-42
PS62_ARATH (O81147) Proteasome subunit alpha type 6-2 (EC 3.4.25... 162 1e-40
PSA6_SOYBN (O48551) Proteasome subunit alpha type 6 (EC 3.4.25.1... 161 2e-40
PS61_ARATH (O81146) Proteasome subunit alpha type 6-1 (EC 3.4.25... 159 2e-39
PSA6_ORYSA (Q9LSU3) Proteasome subunit alpha type 6 (EC 3.4.25.1... 157 3e-39
PSA6_RAT (P60901) Proteasome subunit alpha type 6 (EC 3.4.25.1) ... 125 2e-29
PSA6_MOUSE (Q9QUM9) Proteasome subunit alpha type 6 (EC 3.4.25.1... 125 2e-29
PSA6_HUMAN (P60900) Proteasome subunit alpha type 6 (EC 3.4.25.1... 125 2e-29
PSA6_SCHPO (O94517) Probable proteasome subunit alpha type 6 (EC... 108 3e-24
PSA6_YEAST (P21243) Proteasome component C7-alpha (EC 3.4.25.1) ... 102 1e-22
PSA6_DROME (Q9XZJ4) Proteasome subunit alpha type 6 (EC 3.4.25.1... 99 1e-21
PSA6_CAEEL (O17586) Proteasome subunit alpha type 6 (EC 3.4.25.1... 97 5e-21
PSA1_TRYBB (Q9GU37) Proteasome subunit alpha type 1 (EC 3.4.25.1... 82 2e-16
PSMA_METTH (O26782) Proteasome alpha subunit (EC 3.4.25.1) (Mult... 74 5e-14
PSMA_METAC (Q8TPX5) Proteasome alpha subunit (EC 3.4.25.1) (Mult... 74 6e-14
PSMA_METTE (Q59565) Proteasome alpha subunit (EC 3.4.25.1) (Mult... 73 1e-13
PSMA_METMA (Q8PTU1) Proteasome alpha subunit (EC 3.4.25.1) (Mult... 73 1e-13
PSA5_TRYBB (Q9XZG5) Proteasome subunit alpha type 5 (EC 3.4.25.1... 73 1e-13
PSA5_SCHPO (Q9UT97) Probable proteasome subunit alpha type 5 (EC... 70 7e-13
PSMA_SULSO (Q9UXC6) Proteasome alpha subunit (EC 3.4.25.1) (Mult... 70 9e-13
>PSA6_TOBAC (Q9XG77) Proteasome subunit alpha type 6 (EC 3.4.25.1)
(20S proteasome alpha subunit A) (20S proteasome
subunit alpha-1)
Length = 246
Score = 166 bits (420), Expect = 9e-42
Identities = 82/84 (97%), Positives = 83/84 (98%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKL 60
MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRG DSVCVVTQKKVPDKL
Sbjct: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKL 60
Query: 61 LDQTSVTHLFPITKYLGLLATGMT 84
LDQTSV+HLFPITKYLGLLATGMT
Sbjct: 61 LDQTSVSHLFPITKYLGLLATGMT 84
>PS62_ARATH (O81147) Proteasome subunit alpha type 6-2 (EC
3.4.25.1) (20S proteasome alpha subunit A2)
Length = 246
Score = 162 bits (410), Expect = 1e-40
Identities = 80/87 (91%), Positives = 83/87 (94%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKL 60
MSRGSG GYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRG DSVCVVTQKKVPDKL
Sbjct: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKL 60
Query: 61 LDQTSVTHLFPITKYLGLLATGMTGVS 87
LDQ+SV+HLFP+TKYLGLLATGMT S
Sbjct: 61 LDQSSVSHLFPVTKYLGLLATGMTADS 87
>PSA6_SOYBN (O48551) Proteasome subunit alpha type 6 (EC 3.4.25.1)
(20S proteasome alpha subunit A) (20S proteasome
subunit alpha-1) (Proteasome iota subunit)
Length = 246
Score = 161 bits (408), Expect = 2e-40
Identities = 79/84 (94%), Positives = 81/84 (96%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKL 60
MSRGSGGGY+RHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRG DS+CVVT KKVPDKL
Sbjct: 1 MSRGSGGGYNRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSICVVTHKKVPDKL 60
Query: 61 LDQTSVTHLFPITKYLGLLATGMT 84
LD TSVTHLFPITKYLGLLATGMT
Sbjct: 61 LDNTSVTHLFPITKYLGLLATGMT 84
>PS61_ARATH (O81146) Proteasome subunit alpha type 6-1 (EC
3.4.25.1) (20S proteasome alpha subunit A1)
Length = 246
Score = 159 bits (401), Expect = 2e-39
Identities = 77/84 (91%), Positives = 81/84 (95%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKL 60
MSRGSG GYDRHITIFSPEGRLFQVEYAFKAVK AGITSIGVRG DSVCVVTQKKVPDKL
Sbjct: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKL 60
Query: 61 LDQTSVTHLFPITKYLGLLATGMT 84
LDQ+SVTHLFPITKY+GL+ATG+T
Sbjct: 61 LDQSSVTHLFPITKYIGLVATGIT 84
>PSA6_ORYSA (Q9LSU3) Proteasome subunit alpha type 6 (EC 3.4.25.1)
(20S proteasome alpha subunit A) (20S proteasome
subunit alpha-1)
Length = 246
Score = 157 bits (398), Expect = 3e-39
Identities = 75/84 (89%), Positives = 81/84 (96%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKL 60
MSRG+G GYDRHITIFSPEGRL+QVEYAFKAVK+AG+TSIGVRG DSVCVVTQKKVPDKL
Sbjct: 1 MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKL 60
Query: 61 LDQTSVTHLFPITKYLGLLATGMT 84
LD TSVTHLFPITKY+GLLATG+T
Sbjct: 61 LDHTSVTHLFPITKYIGLLATGLT 84
>PSA6_RAT (P60901) Proteasome subunit alpha type 6 (EC 3.4.25.1)
(Proteasome iota chain) (Macropain iota chain)
(Multicatalytic endopeptidase complex iota chain)
Length = 246
Score = 125 bits (314), Expect = 2e-29
Identities = 59/87 (67%), Positives = 70/87 (79%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKL 60
MSRGS G+DRHITIFSPEGRL+QVEYAFKA+ G+TS+ VRG D +VTQKKVPDKL
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL 60
Query: 61 LDQTSVTHLFPITKYLGLLATGMTGVS 87
LD ++VTHLF IT+ +G + TGMT S
Sbjct: 61 LDSSTVTHLFKITENIGCVMTGMTADS 87
>PSA6_MOUSE (Q9QUM9) Proteasome subunit alpha type 6 (EC 3.4.25.1)
(Proteasome iota chain) (Macropain iota chain)
(Multicatalytic endopeptidase complex iota chain)
Length = 246
Score = 125 bits (314), Expect = 2e-29
Identities = 59/87 (67%), Positives = 70/87 (79%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKL 60
MSRGS G+DRHITIFSPEGRL+QVEYAFKA+ G+TS+ VRG D +VTQKKVPDKL
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL 60
Query: 61 LDQTSVTHLFPITKYLGLLATGMTGVS 87
LD ++VTHLF IT+ +G + TGMT S
Sbjct: 61 LDSSTVTHLFKITESIGCVMTGMTADS 87
>PSA6_HUMAN (P60900) Proteasome subunit alpha type 6 (EC 3.4.25.1)
(Proteasome iota chain) (Macropain iota chain)
(Multicatalytic endopeptidase complex iota chain) (27
kDa prosomal protein) (PROS-27) (p27K)
Length = 246
Score = 125 bits (314), Expect = 2e-29
Identities = 59/87 (67%), Positives = 70/87 (79%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKL 60
MSRGS G+DRHITIFSPEGRL+QVEYAFKA+ G+TS+ VRG D +VTQKKVPDKL
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL 60
Query: 61 LDQTSVTHLFPITKYLGLLATGMTGVS 87
LD ++VTHLF IT+ +G + TGMT S
Sbjct: 61 LDSSTVTHLFKITENIGCVMTGMTADS 87
>PSA6_SCHPO (O94517) Probable proteasome subunit alpha type 6 (EC
3.4.25.1)
Length = 244
Score = 108 bits (269), Expect = 3e-24
Identities = 49/75 (65%), Positives = 62/75 (82%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKLLDQTSVT 67
G+DR IT+FSPEGRL+QVEYAFKA AGITS+GV G + CV++QKKVPDKL+D ++V
Sbjct: 6 GFDRTITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVK 65
Query: 68 HLFPITKYLGLLATG 82
H+FPITK +G + TG
Sbjct: 66 HVFPITKGIGCVMTG 80
>PSA6_YEAST (P21243) Proteasome component C7-alpha (EC 3.4.25.1)
(Macropain subunit C7-alpha) (Proteinase YSCE subunit
7) (Multicatalytic endopeptidase complex C7) (Component
Y8) (SCL1 suppressor protein)
Length = 252
Score = 102 bits (255), Expect = 1e-22
Identities = 47/78 (60%), Positives = 60/78 (76%)
Query: 5 SGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKLLDQT 64
S GYDRHITIFSPEGRL+QVEYAFKA I S+ VRG D V++QKKVPDKLLD T
Sbjct: 8 SAAGYDRHITIFSPEGRLYQVEYAFKATNQTNINSLAVRGKDCTVVISQKKVPDKLLDPT 67
Query: 65 SVTHLFPITKYLGLLATG 82
+V+++F I++ +G++ G
Sbjct: 68 TVSYIFCISRTIGMVVNG 85
>PSA6_DROME (Q9XZJ4) Proteasome subunit alpha type 6 (EC 3.4.25.1)
(20S proteasome subunit alpha-1)
Length = 244
Score = 99.4 bits (246), Expect = 1e-21
Identities = 48/82 (58%), Positives = 59/82 (71%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKL 60
MSRGS G+DRHITIFSPEGRL+QVEYAFKA+ IT++ ++ D V TQKKV +K
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKN 60
Query: 61 LDQTSVTHLFPITKYLGLLATG 82
+ +VTHLF ITK +G TG
Sbjct: 61 IVPETVTHLFRITKDIGCAMTG 82
>PSA6_CAEEL (O17586) Proteasome subunit alpha type 6 (EC 3.4.25.1)
(Proteasome subunit alpha 1)
Length = 246
Score = 97.4 bits (241), Expect = 5e-21
Identities = 43/83 (51%), Positives = 62/83 (73%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKL 60
MSRGS G+DRHITIFSPEGR++QVEYAFKA+ + +T++ V+G D+ + QK+VPD L
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSL 60
Query: 61 LDQTSVTHLFPITKYLGLLATGM 83
+ +VT ++ I++ +G A GM
Sbjct: 61 IVADTVTSVYQISQSVGCCAIGM 83
>PSA1_TRYBB (Q9GU37) Proteasome subunit alpha type 1 (EC 3.4.25.1)
(20SPA1)
Length = 266
Score = 82.4 bits (202), Expect = 2e-16
Identities = 38/78 (48%), Positives = 54/78 (68%)
Query: 5 SGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKLLDQT 64
S G+D++IT+FSPEG L+QVEYAFKAV AG+ ++ +R D+V V TQ VPDKL+
Sbjct: 2 SRAGFDKYITVFSPEGSLYQVEYAFKAVTYAGLLTVAIRCKDAVLVFTQHSVPDKLMRPE 61
Query: 65 SVTHLFPITKYLGLLATG 82
++T L+ + G+ TG
Sbjct: 62 TITSLYNVNDNTGVCITG 79
>PSMA_METTH (O26782) Proteasome alpha subunit (EC 3.4.25.1)
(Multicatalytic endopeptidase complex alpha subunit)
Length = 248
Score = 74.3 bits (181), Expect = 5e-14
Identities = 35/76 (46%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKLLDQTSVT 67
GYDR IT+FSP+GRLFQVEYA +AVK G TS+GV+ + + +V K+ KL++ S+
Sbjct: 8 GYDRAITVFSPDGRLFQVEYAREAVK-RGTTSLGVKSKEGIVLVVDKRPTSKLVEPKSIE 66
Query: 68 HLFPITKYLGLLATGM 83
+F I +++G +G+
Sbjct: 67 KIFQIDEHIGAATSGL 82
>PSMA_METAC (Q8TPX5) Proteasome alpha subunit (EC 3.4.25.1)
(Multicatalytic endopeptidase complex alpha subunit)
Length = 247
Score = 73.9 bits (180), Expect = 6e-14
Identities = 33/76 (43%), Positives = 54/76 (70%), Gaps = 1/76 (1%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKLLDQTSVT 67
GYDR IT+FSP+GRLFQVEYA +AVK G T++G++ D V ++ K++ +L++ S+
Sbjct: 6 GYDRAITVFSPDGRLFQVEYAREAVK-RGTTAVGIKAADGVVLLVDKRITSRLVEAESIE 64
Query: 68 HLFPITKYLGLLATGM 83
+F I +++G +G+
Sbjct: 65 KIFQIDEHIGAATSGL 80
>PSMA_METTE (Q59565) Proteasome alpha subunit (EC 3.4.25.1)
(Multicatalytic endopeptidase complex alpha subunit)
Length = 247
Score = 73.2 bits (178), Expect = 1e-13
Identities = 33/76 (43%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKLLDQTSVT 67
GYDR IT+FSP+GRLFQVEYA +AVK G T++G++ D V ++ K++ +L++ S+
Sbjct: 6 GYDRAITVFSPDGRLFQVEYAREAVK-RGTTAVGIKAADGVVLLVDKRITSRLVEAESIE 64
Query: 68 HLFPITKYLGLLATGM 83
+F I ++G +G+
Sbjct: 65 KIFQIDDHIGAATSGL 80
>PSMA_METMA (Q8PTU1) Proteasome alpha subunit (EC 3.4.25.1)
(Multicatalytic endopeptidase complex alpha subunit)
Length = 249
Score = 73.2 bits (178), Expect = 1e-13
Identities = 33/76 (43%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKLLDQTSVT 67
GYDR IT+FSP+GRLFQVEYA +AVK G T++G++ D V ++ K++ +L++ S+
Sbjct: 8 GYDRAITVFSPDGRLFQVEYAREAVK-RGTTAVGIKAADGVVLLVDKRITSRLVEAESIE 66
Query: 68 HLFPITKYLGLLATGM 83
+F I ++G +G+
Sbjct: 67 KIFQIDDHIGAATSGL 82
>PSA5_TRYBB (Q9XZG5) Proteasome subunit alpha type 5 (EC 3.4.25.1)
(20S proteasome subunit alpha-5)
Length = 246
Score = 73.2 bits (178), Expect = 1e-13
Identities = 33/75 (44%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 9 YDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKLLDQTSVTH 68
YDR + FSPEGR+FQ+EYA +A+K G TS+G++ D+V + +K+VP L+D +SV
Sbjct: 8 YDRGVNTFSPEGRIFQIEYAIEAIK-LGSTSLGIQTPDAVIIAAEKRVPSTLVDPSSVNK 66
Query: 69 LFPITKYLGLLATGM 83
+ I ++G + +GM
Sbjct: 67 ILEIDHHIGTVLSGM 81
>PSA5_SCHPO (Q9UT97) Probable proteasome subunit alpha type 5 (EC
3.4.25.1)
Length = 247
Score = 70.5 bits (171), Expect = 7e-13
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 9 YDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKLLDQTSVTH 68
YDR + FSPEGRLFQVEYA +A+K G T+IGV+ D+V + +K++ L++ SV
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIK-LGSTAIGVKTKDAVVLGVEKRLTSPLMESHSVEK 66
Query: 69 LFPITKYLGLLATGMT 84
LF I ++G +G+T
Sbjct: 67 LFEIDSHIGCAISGLT 82
>PSMA_SULSO (Q9UXC6) Proteasome alpha subunit (EC 3.4.25.1)
(Multicatalytic endopeptidase complex alpha subunit)
Length = 241
Score = 70.1 bits (170), Expect = 9e-13
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKLLDQTSVT 67
GYDR ITIFSP+G L+QV+YAF+AVK G T+IG++ SV + ++K+ LLD S+
Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVK-KGWTAIGIKSKSSVVIASEKRKAQSLLDVDSIE 67
Query: 68 HLFPITKYLGLLATGM 83
+F I ++G G+
Sbjct: 68 KVFLIDDHVGCSFAGL 83
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.322 0.139 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,201,126
Number of Sequences: 164201
Number of extensions: 386381
Number of successful extensions: 1000
Number of sequences better than 10.0: 128
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 812
Number of HSP's gapped (non-prelim): 128
length of query: 96
length of database: 59,974,054
effective HSP length: 72
effective length of query: 24
effective length of database: 48,151,582
effective search space: 1155637968
effective search space used: 1155637968
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Medicago: description of AC146756.7