BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146756.6 - phase: 0
(281 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
MLH_TETTH (P40631) Micronuclear linker histone polyprotein (MIC ... 59 1e-08
CYL2_BOVIN (Q28092) Cylicin II (Multiple-band polypeptide II) 58 3e-08
RRB1_MOUSE (Q99PL5) Ribosome-binding protein 1 (Ribosome recepto... 54 3e-07
IF2_LACPL (Q88VK7) Translation initiation factor IF-2 54 6e-07
RTOA_DICDI (P54681) Protein rtoA (Ratio-A) 53 7e-07
NONA_DROME (Q04047) No-on-transient A protein 52 1e-06
HXB3_MOUSE (P09026) Homeobox protein Hox-B3 (Hox-2.7) (MH-23) 52 2e-06
PHR2_HUMAN (O75167) Phosphatase and actin regulator 2 51 3e-06
NP14_RAT (P41777) Nucleolar phosphoprotein p130 (Nucleolar 130 k... 51 4e-06
IF2_PROMA (Q7VA20) Translation initiation factor IF-2 51 4e-06
NFM_BOVIN (O77788) Neurofilament triplet M protein (160 kDa neur... 50 6e-06
MACS_BOVIN (P12624) Myristoylated alanine-rich C-kinase substrat... 50 8e-06
SERA_ENTHI (P21138) Serine-rich 25 kDa antigen protein (SHEHP) (... 49 1e-05
HXB3_HUMAN (P14651) Homeobox protein Hox-B3 (Hox-2G) (Hox-2.7) 49 1e-05
ATRX_PONPY (Q7YQM3) Transcriptional regulator ATRX (X-linked hel... 49 1e-05
SFR4_HUMAN (Q08170) Splicing factor, arginine/serine-rich 4 (Pre... 49 1e-05
NP14_HUMAN (Q14978) Nucleolar phosphoprotein p130 (Nucleolar 130... 49 1e-05
DAH1_HUMAN (Q9UI36) Dachshund homolog 1 (Dach1) 49 1e-05
SSRP_RAT (Q04931) Structure-specific recognition protein 1 (SSRP... 48 3e-05
GAR2_SCHPO (P41891) Protein gar2 48 3e-05
>MLH_TETTH (P40631) Micronuclear linker histone polyprotein (MIC LH)
[Contains: Micronuclear linker histone-alpha;
Micronuclear linker histone-beta; Micronuclear linker
histone-delta; Micronuclear linker histone-gamma]
Length = 633
Score = 59.3 bits (142), Expect = 1e-08
Identities = 71/278 (25%), Positives = 120/278 (42%), Gaps = 32/278 (11%)
Query: 4 FGQAQSNTITQKSDSLPPNTPLSRPDSLSKHKPPILVCRKRSSIPVKPSTTTFSHKGDHK 63
+GQA T++ +S T SR S SK K + R +S+ + + ++ S
Sbjct: 167 YGQAAQKKQTKRKNS----TSKSRRSS-SKGKSSVSKGRTKSTSSKRRADSSASQGRSQS 221
Query: 64 PIINDKKERPSSDVKPTLKPSYSETDEEEPPKAKEKPVTGARSRRSNKNLSSNASNKKPP 123
N +K S D K T S ++ + G ++ SNK SS +S+K+
Sbjct: 222 SSSNRRKASSSKDQKGTRSSSRKASNSK-----------GRKNSTSNKRNSS-SSSKRSS 269
Query: 124 SNSTPRTGSSANKPAETPKLKNKAEGVSDKKKNNGAAGFLNRIKKNESVEVLRSGSGGGG 183
S+ ++ SS NK + + K + S + A+ NR K+ + +S S G
Sbjct: 270 SSKNKKSSSSKNKKSSSSKGRK-----SSSSRGRKASSSKNR--KSSKSKDRKSSSSKGR 322
Query: 184 GSSGSSKGGGGGGTNTKEQKKVVNNG-KGEKGKERASRYNDGGG--SGSGDKRNKNIES- 239
SS SSK ++++ +K + G K K +ER + + D G KR ++ S
Sbjct: 323 KSSSSSKSNKRKASSSRGRKSSSSKGRKSSKSQERKNSHADTSKQMEDEGQKRRQSSSSA 382
Query: 240 ----NSKRNVGRPPKKAAETVASTKRGRESSASGGKDK 273
+SK++ K+A A+ K ++S SG K K
Sbjct: 383 KRDESSKKSRRNSMKEARTKKANNKSASKASKSGSKSK 420
Score = 53.9 bits (128), Expect = 4e-07
Identities = 55/244 (22%), Positives = 92/244 (37%), Gaps = 47/244 (19%)
Query: 50 KPSTTTFSHKGDHKPIINDKKERPSSDVKPTLKPSYSETDEEEPPKAKEKPVTGARSRRS 109
+ ++T+ S + K + K R S S + + + + + ++ ++
Sbjct: 178 RKNSTSKSRRSSSKGKSSVSKGRTKSTSSKRRADSSASQGRSQSSSSNRRKASSSKDQKG 237
Query: 110 NKNLSSNASNKKPPSNSTPRTGSSANKPAETPKLKNKAEGVSDKKKNNGAAGFLNRIKKN 169
++ S ASN K NST +S++ + KNK S KK++ + G
Sbjct: 238 TRSSSRKASNSKGRKNSTSNKRNSSSSSKRSSSSKNKKSSSSKNKKSSSSKG-------- 289
Query: 170 ESVEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGS 229
R S G + SSK N K K K+R S + G S S
Sbjct: 290 ------RKSSSSRGRKASSSK-----------------NRKSSKSKDRKSSSSKGRKSSS 326
Query: 230 GDKRNKNIESNSK-----RNVGRPPKKAAETVAS-----------TKRGRESSASGGKDK 273
K NK S+S+ + GR K+ E S ++ R+SS+S +D+
Sbjct: 327 SSKSNKRKASSSRGRKSSSSKGRKSSKSQERKNSHADTSKQMEDEGQKRRQSSSSAKRDE 386
Query: 274 RPKK 277
KK
Sbjct: 387 SSKK 390
Score = 51.2 bits (121), Expect = 3e-06
Identities = 46/189 (24%), Positives = 75/189 (39%), Gaps = 7/189 (3%)
Query: 95 KAKEKPVTGARSRRSNKNLSSNASNKKPPSNSTPRTGSSANKPAETPKLKN--KAEGVSD 152
+ K K T R S+K SS + + ++S R SSA++ N KA D
Sbjct: 175 QTKRKNSTSKSRRSSSKGKSSVSKGRTKSTSSKRRADSSASQGRSQSSSSNRRKASSSKD 234
Query: 153 KKKNNGAAGFLNRIKKNESVEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGE 212
+K ++ + K ++ + S S SSK + K+ ++ KG
Sbjct: 235 QKGTRSSSRKASNSKGRKNSTSNKRNSSSSSKRSSSSKNKKSSSSKNKKS----SSSKGR 290
Query: 213 KGKERASRYNDGGGSGSGDKRNKNIESNSKRNVGRPPKKAAETVASTKRGRESSASGGKD 272
K R + K S+SK K+ + AS+ RGR+SS+S G+
Sbjct: 291 KSSSSRGRKASSSKNRKSSKSKDRKSSSSKGRKSSSSSKSNKRKASSSRGRKSSSSKGR- 349
Query: 273 KRPKKRSKK 281
K K + +K
Sbjct: 350 KSSKSQERK 358
Score = 51.2 bits (121), Expect = 3e-06
Identities = 67/284 (23%), Positives = 111/284 (38%), Gaps = 45/284 (15%)
Query: 26 SRPDSLSKHKPPILVCRKRSSIPVKPSTTTFSHKGDHKPIINDKKERPSSDVKPTLKPSY 85
SR S SK + ++ SS K S+++ + K + K + SS K S
Sbjct: 242 SRKASNSKGRKNSTSNKRNSSSSSKRSSSSKNKKS------SSSKNKKSSSSKGRKSSSS 295
Query: 86 -----SETDEEEPPKAKEKPVTGARSRRSNKNLSSNASNKKPPSNSTPRTGSSAN--KPA 138
S + + K+K++ + ++ R+S+ SS+ SNK+ S+S R SS+ K +
Sbjct: 296 RGRKASSSKNRKSSKSKDRKSSSSKGRKSS---SSSKSNKRKASSSRGRKSSSSKGRKSS 352
Query: 139 ETPKLKNKAEGVSDKKKNNGAAGFLNRIKKNESVEVLRSGSGGGGGSSGSSKGGGGGGTN 198
++ + KN S + ++ G K+ +S + S K N
Sbjct: 353 KSQERKNSHADTSKQMEDEGQ-------KRRQSSSSAKRDESSKKSRRNSMKEARTKKAN 405
Query: 199 TKEQKKVVNNG---KGE-----KGKERASRYNDGGGSGSGDKRNKNIESNSKRNVGRPPK 250
K K +G KG+ KGK + N S S K N SN+ +
Sbjct: 406 NKSASKASKSGSKSKGKSASKSKGKSSSKGKNSKSRSASKPKSNAAQNSNNTHQTADSSE 465
Query: 251 KAAETVASTKRGRE--------------SSASGGKDKRPKKRSK 280
A+ T + RGR+ SS+ G K+ + RSK
Sbjct: 466 NASSTTQTRTRGRQREQKDMVNEKSNSKSSSKGKKNSKSNTRSK 509
Score = 49.3 bits (116), Expect = 1e-05
Identities = 36/177 (20%), Positives = 70/177 (39%), Gaps = 7/177 (3%)
Query: 104 ARSRRSNKNLSSNASNKKPPSNSTPRTGSSANKPAETPKLKNKAEGVSDKKKNNGAAGFL 163
A ++ K +S + +++ S G S+ T +K S + +
Sbjct: 170 AAQKKQTKRKNSTSKSRRSSSK-----GKSSVSKGRTKSTSSKRRADSSASQGRSQSSSS 224
Query: 164 NRIKKNESVEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYND 223
NR K + S + + G+ + +SKG +N + K K+ +S N
Sbjct: 225 NRRKASSSKD--QKGTRSSSRKASNSKGRKNSTSNKRNSSSSSKRSSSSKNKKSSSSKNK 282
Query: 224 GGGSGSGDKRNKNIESNSKRNVGRPPKKAAETVASTKRGRESSASGGKDKRPKKRSK 280
S G K + + + + R K+ + +S+ +GR+SS+S +KR S+
Sbjct: 283 KSSSSKGRKSSSSRGRKASSSKNRKSSKSKDRKSSSSKGRKSSSSSKSNKRKASSSR 339
Score = 45.1 bits (105), Expect = 2e-04
Identities = 47/226 (20%), Positives = 76/226 (32%), Gaps = 24/226 (10%)
Query: 59 KGDHKPIINDKKERPSSDVKPTLKPSYSETDEEEPPKAKEKPVTGARSR---RSNKNLSS 115
KG + K R +S K + + T + T R+R R K++ +
Sbjct: 428 KGKSSSKGKNSKSRSASKPKSNAAQNSNNTHQTADSSENASSTTQTRTRGRQREQKDMVN 487
Query: 116 NASNKKPPSNSTPRTGSSANKPAETPKLKNKAEGVSDKKKNNGAAGFLNRIKKNESVEVL 175
SN K S + S+ +++ + S KK+ G R K
Sbjct: 488 EKSNSKSSSKGKKNSKSNTRSKSKSKSASKSRKNASKSKKDTTNHGRQTRSK-------- 539
Query: 176 RSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSGDKRNK 235
S SK + +V+ K E + + DK++K
Sbjct: 540 ---------SRSESKSKSEAPNKPSNKMEVIEQPKEESSDRKRRESRSQSAKKTSDKKSK 590
Query: 236 NIESNSKRNVGRPPKKAAETVASTKRGRESSASGGKDKRPKKRSKK 281
N S+SK+ PKK A +G++ S G KK +KK
Sbjct: 591 N-RSDSKKMTAEDPKK---NNAEDSKGKKKSKEGKTGAYGKKANKK 632
Score = 43.9 bits (102), Expect = 4e-04
Identities = 46/193 (23%), Positives = 82/193 (41%), Gaps = 9/193 (4%)
Query: 96 AKEKPVTGARSRRSNKNLSSNASNKKPPSNSTPRTGSSANKPAETPKLKNK----AEGVS 151
AK K +T A+ + +N K+ A E K K A+
Sbjct: 116 AKHKDLTNAKILKIMSEDFNNLPQKEVKVYEDAYQKEYAQYLVEFKKWNEKYGQAAQKKQ 175
Query: 152 DKKKNNGAAGFLNRIKKNESVEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKG 211
K+KN+ + + K SV R+ S + SS G +++ ++K ++ K
Sbjct: 176 TKRKNSTSKSRRSSSKGKSSVSKGRTKSTSSKRRADSSASQGRSQSSSSNRRKA-SSSKD 234
Query: 212 EKGKERASRY-NDGGGSGSGDKRNKNIESNSKRNVGRPPKKAAET---VASTKRGRESSA 267
+KG +SR ++ G + +N S+SKR+ KK++ + +S+ +GR+SS+
Sbjct: 235 QKGTRSSSRKASNSKGRKNSTSNKRNSSSSSKRSSSSKNKKSSSSKNKKSSSSKGRKSSS 294
Query: 268 SGGKDKRPKKRSK 280
S G+ K K
Sbjct: 295 SRGRKASSSKNRK 307
>CYL2_BOVIN (Q28092) Cylicin II (Multiple-band polypeptide II)
Length = 488
Score = 57.8 bits (138), Expect = 3e-08
Identities = 58/267 (21%), Positives = 101/267 (37%), Gaps = 12/267 (4%)
Query: 23 TPLSRPDSLSKHKPPILVCRKRSSIPVKPSTTTFSHKGDHKPIINDKKERPSSDVKPTLK 82
TP S+ D+ KP +K K + S KP K + D K LK
Sbjct: 103 TPPSQEDAKQAAKPSSPKVKKSKEDKDKSDSEAESIVSKEKPRKLSKAKEEKPDEKKDLK 162
Query: 83 PSYSETDEEEPPKAKEKPVTGARSRRSNKNLSSNASNKKPPSNSTPRTGSSANKPAETPK 142
++ + + + + + + K+ + K+ PS+S G + ++ K
Sbjct: 163 KERKDSKKGKESATESEDEKAGAEKGAKKDRKGSKKGKETPSDSGSEKGDAKKDSKKSKK 222
Query: 143 LKNKAEGVSDKKKNNGAAGFLNRIKKNESVEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQ 202
E ++ + G A ++ K S + S + G + K G +K+
Sbjct: 223 DSKGKESATESEGEKGDAKKDDKKGKKGSKKGKESATESEGEKGDAKKDDKKGKKGSKKG 282
Query: 203 KKVVNNGKGEKGKERASRYNDGGGSGSGDKRNKNIESNSKRNVGRPPKKAAETVASTKRG 262
K+ +GEKG + D G K+ K + S+ G K + +K+G
Sbjct: 283 KESATESEGEKGDAK----KDDKKGKKGSKKGKESATESEGEKGDAKKDDKKGKKGSKKG 338
Query: 263 RESS--ASGGK------DKRPKKRSKK 281
+ES+ + G K DK+ KK SKK
Sbjct: 339 KESATESEGEKGDAKKDDKKGKKGSKK 365
Score = 53.1 bits (126), Expect = 7e-07
Identities = 52/239 (21%), Positives = 92/239 (37%), Gaps = 19/239 (7%)
Query: 42 RKRSSIPVKPSTTTFSHKGDHKPIINDKKERPSSDVKPTLKPSYSETDEEEPPKAKEKPV 101
RK S + + + S KGD K + KK + S K + + SE ++ + K +K
Sbjct: 193 RKGSKKGKETPSDSGSEKGDAKK--DSKKSKKDSKGKESA--TESEGEKGDAKKDDKKGK 248
Query: 102 TGARSRRSNKNLSSNASNKKPPSNSTPRTGSSANKPAETPKLKNKAEGVSDKKKNNGAAG 161
G++ + + S + + GS K + T K + D KK
Sbjct: 249 KGSKKGKESATESEGEKGDAKKDDKKGKKGSKKGKESATESEGEKGDAKKDDKKG----- 303
Query: 162 FLNRIKKNESVEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRY 221
K S + S + G + K G +K+ K+ +GEKG +
Sbjct: 304 ------KKGSKKGKESATESEGEKGDAKKDDKKGKKGSKKGKESATESEGEKGDAK---- 353
Query: 222 NDGGGSGSGDKRNKNIESNSKRNVGRPPKKAAETVASTKRGRESSASGGKDKRPKKRSK 280
D G K+ K +S ++ + G K + +K+G+ES+ +K+ K+ K
Sbjct: 354 KDDKKGKKGSKKGKESDSKAEGDKGDAKKDDKKDKKGSKKGKESATESEGEKKDSKKDK 412
Score = 45.8 bits (107), Expect = 1e-04
Identities = 59/282 (20%), Positives = 99/282 (34%), Gaps = 19/282 (6%)
Query: 5 GQAQSNTITQKSDSLPPNTPLSRPDSLSKHKPPILVCRKRSSIPVKPSTTTFSHKGDHKP 64
G A+ ++ K DS + K +K S + +T + KGD K
Sbjct: 211 GDAKKDSKKSKKDSKGKESATESEGEKGDAKKDDKKGKKGSKKGKESATESEGEKGDAKK 270
Query: 65 IINDKKERPSSDVKPTLKPSYSETDEEEPPKAKEKPVTGARSRRSNKNLSSNASNKKPPS 124
+DKK + S K + SE ++ + K +K G++ + + S
Sbjct: 271 --DDKKGKKGSK-KGKESATESEGEKGDAKKDDKKGKKGSKKGKESATESEGEKGDAKKD 327
Query: 125 NSTPRTGSSANKPAETPKLKNKAEGVSDKKKNNGAAGFLNRIKKNESVEVLRSGSGGGGG 184
+ + GS K + T K + D KK K S + S S G
Sbjct: 328 DKKGKKGSKKGKESATESEGEKGDAKKDDKKG-----------KKGSKKGKESDSKAEGD 376
Query: 185 SSGSSKGGGGGGTNTKEQKKVVNNGKGEK---GKERASRYN--DGGGSGSGDKRNKNIES 239
+ K +K+ K+ +GEK K++A + + G G K K+ +
Sbjct: 377 KGDAKKDDKKDKKGSKKGKESATESEGEKKDSKKDKAGKKDPTKAGEKGDESKDKKDAKK 436
Query: 240 NSKRNVGRPPKKAAETVASTKRGRESSASGGKDKRPKKRSKK 281
+ + KK E + K + A K KK +KK
Sbjct: 437 KDSKKEKKDEKKPGEAESEPKDSAKKDAKKDAKKDAKKDAKK 478
>RRB1_MOUSE (Q99PL5) Ribosome-binding protein 1 (Ribosome receptor
protein) (mRRp)
Length = 1605
Score = 54.3 bits (129), Expect = 3e-07
Identities = 57/262 (21%), Positives = 102/262 (38%), Gaps = 28/262 (10%)
Query: 48 PVKPSTTTFSHKGDHKPIINDKKERPSSDVKPTLKPSYSETDEEEPPKAKEKP----VTG 103
PV+ S + H + + + + L S + ++E AK +P +
Sbjct: 99 PVRVSAVAVAPTSVHSSVGHTPIATVPAMPQEKLASSPKDRKKKEKKVAKVEPAVSSIVN 158
Query: 104 ARSRRSNKNLSSNASNKKPPSNSTPRTGSSANKPAETPKLKNKAEGVSDKKKNNGAA--- 160
+ ++K+ A+ K+ P + P GS A+ PA + + K + KK GA
Sbjct: 159 SIQVLASKSAILEATPKEVPMVAVPPVGSKASSPATSSQGKKGQGAQNQAKKGEGAQNQG 218
Query: 161 ----GFLNRIKKNESVE-VLRSGSGG------GGGSSGSSKGGGGGGTNTKEQKKVVNNG 209
G N+ KK E + + G G G G+ +K G GG K+ + N G
Sbjct: 219 KKGEGAQNQAKKGEGAQNQAKKGEGAQNQGKKGEGAQNQAKKGEGGQNQAKKGEGAQNQG 278
Query: 210 K--------GEKGKERASRYNDGGGSGSGDKRNKNIESNSKRNVG--RPPKKAAETVAST 259
K G+KG+ ++ G G+ + K+ + ++ K+ G KK
Sbjct: 279 KKGEGAQNQGKKGEGAQNQAKKGEGAQNQAKKGEGAQNQGKKGEGAQNQSKKGEGAQNQA 338
Query: 260 KRGRESSASGGKDKRPKKRSKK 281
K+G K + + ++KK
Sbjct: 339 KKGEGGQNQAKKGEGAQNQAKK 360
Score = 46.2 bits (108), Expect = 9e-05
Identities = 45/198 (22%), Positives = 82/198 (40%), Gaps = 27/198 (13%)
Query: 92 EPPKAKEKPVTGARSRRSNKNLSSNASNKKPPSNSTPRTGSSANKPAETPKLKNKAEGVS 151
E + ++K + GA+++ +SN K + + + G A + K EG
Sbjct: 564 EAAQKQDKKIEGAQNQGKKPEGTSNQGKKGEGAQNQGKKGEGAQNQGK------KGEGAQ 617
Query: 152 DK-KKNNGAAGFLNRIKKNESVEVLRSGSGGGGGSSGSSKGGG-------GGGTNTKEQK 203
++ KK GA N+ KK E + G G G + KG G G G + +K
Sbjct: 618 NQGKKGEGAQ---NQGKKGEGAQ--NQGKKGEGAQNQGKKGEGAQNQGKKGEGPQNQAKK 672
Query: 204 KVVNNGKGEKGKERASRYNDGGGSGSGDKRNKNIESNSKRNVGRPPKKAAETVASTKRGR 263
+G+KG+ ++ G G+ + K+ + ++S SK+ G T K+G
Sbjct: 673 GEGAQNQGKKGEGAQNQGKKGEGAQNQGKKAEGVQSQSKKGEG--------TQNQGKKGD 724
Query: 264 ESSASGGKDKRPKKRSKK 281
+ G K + +++K
Sbjct: 725 GNPNQGKKGEGASNQNRK 742
Score = 44.3 bits (103), Expect = 3e-04
Identities = 48/220 (21%), Positives = 89/220 (39%), Gaps = 30/220 (13%)
Query: 92 EPPKAKEKPVTGARSRRSNKNLSSNASNKKPPSNSTPRTGSSA-NKPAETPKLKNKAE-- 148
E + ++K + GA+++ +SN K + + + G A N+ + +N+A+
Sbjct: 423 EAAQKQDKKIEGAQNQGKKPEGTSNQGKKGEGAQNQGKKGEGAQNQSKKGEGAQNQAKKG 482
Query: 149 --GVSDKKKNNGAA-------GFLNRIKKNESVE-VLRSGSGG-------GGGSSGSSKG 191
G + KK GA G N+ KK E V+ + G G G + +K
Sbjct: 483 EGGQNQAKKGEGAQNQAKKGEGAQNQAKKGEGVQNQAKKGVEGAQNQGKKGEANQNQAKK 542
Query: 192 GGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGG--------GSGSGDKRNKNIESNSKR 243
G GG TK+ + N GK + ++ + +G G+ + K+ + ++ K+
Sbjct: 543 GEGGQNQTKKGEGPQNQGKKGEAAQKQDKKIEGAQNQGKKPEGTSNQGKKGEGAQNQGKK 602
Query: 244 NVG--RPPKKAAETVASTKRGRESSASGGKDKRPKKRSKK 281
G KK K+G + G K + + + KK
Sbjct: 603 GEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKK 642
Score = 43.5 bits (101), Expect = 6e-04
Identities = 47/201 (23%), Positives = 81/201 (39%), Gaps = 22/201 (10%)
Query: 92 EPPKAKEKPVTGARSRRSNKNLSSNASNKKPPSNSTPRTGSSANKPAETPKLKNKAEGVS 151
E + + K GA+++ N + K + + + G A A+ K EGV
Sbjct: 322 EGAQNQSKKGEGAQNQAKKGEGGQNQAKKGEGAQNQAKKGEGAQNQAK------KGEGVQ 375
Query: 152 DKKKNNGAAGFLNRIKKNESVEVLRSGSGGGGGSSGSSKGGGG------GGTNTKEQKKV 205
++ K G G N+ KK E+ + G GG + + KG G G K+ KK+
Sbjct: 376 NQAKK-GVEGAQNQGKKGEANQ--NQAKKGEGGQNQTKKGEGPQNQGKKGEAAQKQDKKI 432
Query: 206 V---NNGKGEKGKERASRYNDGGGSGSGDKRNKNIESNSKRNVG--RPPKKAAETVASTK 260
N GK +G + G G+ + K+ + ++ SK+ G KK K
Sbjct: 433 EGAQNQGKKPEGTSNQGK--KGEGAQNQGKKGEGAQNQSKKGEGAQNQAKKGEGGQNQAK 490
Query: 261 RGRESSASGGKDKRPKKRSKK 281
+G + K + + ++KK
Sbjct: 491 KGEGAQNQAKKGEGAQNQAKK 511
Score = 42.0 bits (97), Expect = 0.002
Identities = 51/233 (21%), Positives = 94/233 (39%), Gaps = 30/233 (12%)
Query: 69 KKERPSSDVKPTLKPSYSETDEEEPPKAKEKPVTGARSRRSNKNLSSNASNKKPPSNSTP 128
KK +S+ + + ++ + E + + K GA+++ N + K + +
Sbjct: 440 KKPEGTSNQGKKGEGAQNQGKKGEGAQNQSKKGEGAQNQAKKGEGGQNQAKKGEGAQNQA 499
Query: 129 RTGSSANKPAETPKLKNKAEGVSDKKKNNGAAGFLNRIKKNESVEVLRSGSGGGGGSSGS 188
+ G A A+ K EGV ++ K G G N+ KK E+ + + + G G
Sbjct: 500 KKGEGAQNQAK------KGEGVQNQAKK-GVEGAQNQGKKGEANQ---NQAKKGEGGQNQ 549
Query: 189 SKGGGG-------GGTNTKEQKKV---VNNGK--------GEKGKERASRYNDGGGSGSG 230
+K G G G K+ KK+ N GK G+KG+ ++ G G+ +
Sbjct: 550 TKKGEGPQNQGKKGEAAQKQDKKIEGAQNQGKKPEGTSNQGKKGEGAQNQGKKGEGAQNQ 609
Query: 231 DKRNKNIESNSKRNVG--RPPKKAAETVASTKRGRESSASGGKDKRPKKRSKK 281
K+ + ++ K+ G KK K+G + G K + + + KK
Sbjct: 610 GKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKK 662
Score = 40.4 bits (93), Expect = 0.005
Identities = 42/203 (20%), Positives = 84/203 (40%), Gaps = 15/203 (7%)
Query: 86 SETDEEEPPKAKEKPVTGARSRRSNKNLSSNASNKKPPSNSTPRTGSSANKPAETPK--- 142
++ + E + + K GA+++ + N + K + + + G A A+ +
Sbjct: 206 NQAKKGEGAQNQGKKGEGAQNQAKKGEGAQNQAKKGEGAQNQGKKGEGAQNQAKKGEGGQ 265
Query: 143 -LKNKAEGVSDK-KKNNGAAGFLNRIKKNESVEVLRSGSGGGGGSSGSSKGGGGGGTNTK 200
K EG ++ KK GA N+ KK E + + + G G+ +K G G K
Sbjct: 266 NQAKKGEGAQNQGKKGEGAQ---NQGKKGEGAQ---NQAKKGEGAQNQAKKGEGAQNQGK 319
Query: 201 EQKKVVNNGKGEKGKERASRYNDGGGSGSGDKRNKNIESNSKRNVG--RPPKKAAETVAS 258
+ + N K +G + ++ +GG + + K+ + ++ +K+ G KK
Sbjct: 320 KGEGAQNQSKKGEGAQNQAKKGEGGQNQA--KKGEGAQNQAKKGEGAQNQAKKGEGVQNQ 377
Query: 259 TKRGRESSASGGKDKRPKKRSKK 281
K+G E + + GK + K
Sbjct: 378 AKKGVEGAQNQGKKGEANQNQAK 400
Score = 39.7 bits (91), Expect = 0.008
Identities = 41/206 (19%), Positives = 80/206 (37%), Gaps = 20/206 (9%)
Query: 86 SETDEEEPPKAKEKPVTGARSRRSNKNLSSNASNKKPPSNSTPRTGSSANKPAETPKLKN 145
++ + E + + K GA+++ + N + K + + G A A+
Sbjct: 306 NQAKKGEGAQNQGKKGEGAQNQSKKGEGAQNQAKKGEGGQNQAKKGEGAQNQAK------ 359
Query: 146 KAEGVSDKKKNNGAAGFLNRIKKNESVEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKV 205
K EG ++ K G N+ KK VE ++ G + +K G GG TK+ +
Sbjct: 360 KGEGAQNQAKKG--EGVQNQAKKG--VEGAQNQGKKGEANQNQAKKGEGGQNQTKKGEGP 415
Query: 206 VNNGKGEKGKERASRYNDGG--------GSGSGDKRNKNIESNSKRNVG--RPPKKAAET 255
N GK + ++ + +G G+ + K+ + ++ K+ G KK
Sbjct: 416 QNQGKKGEAAQKQDKKIEGAQNQGKKPEGTSNQGKKGEGAQNQGKKGEGAQNQSKKGEGA 475
Query: 256 VASTKRGRESSASGGKDKRPKKRSKK 281
K+G K + + ++KK
Sbjct: 476 QNQAKKGEGGQNQAKKGEGAQNQAKK 501
Score = 39.3 bits (90), Expect = 0.011
Identities = 39/176 (22%), Positives = 75/176 (42%), Gaps = 12/176 (6%)
Query: 103 GARSRRSNKNLSSNASNK-KPPSNSTPRTGSSANKPAETPKLKN---KAEGVSDKKKNNG 158
GA+++ + N K + P N + + N+ + +N K EG ++ K
Sbjct: 645 GAQNQGKKGEGAQNQGKKGEGPQNQAKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKK-- 702
Query: 159 AAGFLNRIKKNESVEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERA 218
A G ++ KK E + G G G + KG G N K V N G ++G
Sbjct: 703 AEGVQSQSKKGEGTQ--NQGKKGDGNPNQGKKGEGASNQNRKTDT-VANQGTKQEGVSNQ 759
Query: 219 SRYNDGGGSGSGDKRNKNIESNSKRNVGRPPKKAAETVASTKRGRESSASGGKDKR 274
+ ++ GS + K+ + + K+ G P +A + A+ +G++S + + ++
Sbjct: 760 VKKSE--GSPNQGKKAEGAPNQGKKKDG-SPSQAKKVDAAANQGKKSEMAPAQGQK 812
Score = 35.4 bits (80), Expect = 0.16
Identities = 47/217 (21%), Positives = 83/217 (37%), Gaps = 19/217 (8%)
Query: 69 KKERPSSDVKPTLKPSYSETDEEEPPKAKEKPVTGARSRRSNKNLSSNASNKKPPSNSTP 128
KK +S+ + + ++ + E + + K GA+++ + N K + +
Sbjct: 581 KKPEGTSNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQG 640
Query: 129 RTGSSANKPAETPKLKNKAEGVSDKKKNNGAAGFLNRIKKNESVEVLRSGSGGGGGSSGS 188
+ G A + K EG ++ K G N+ KK E + G G G +
Sbjct: 641 KKGEGAQNQGK------KGEGAQNQGKKG--EGPQNQAKKGEGAQ--NQGKKGEGAQNQG 690
Query: 189 SKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDG----GGSGSGDKRNKNIESNSKRN 244
KG G K + + KGE G + + DG G G G N+N ++++ N
Sbjct: 691 KKGEGAQNQGKKAEGVQSQSKKGE-GTQNQGKKGDGNPNQGKKGEG-ASNQNRKTDTVAN 748
Query: 245 VGRPPKKAAETVASTKRGRESSASGGKDKRPKKRSKK 281
G + + V K+ S G K + + KK
Sbjct: 749 QGTKQEGVSNQV---KKSEGSPNQGKKAEGAPNQGKK 782
>IF2_LACPL (Q88VK7) Translation initiation factor IF-2
Length = 858
Score = 53.5 bits (127), Expect = 6e-07
Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 11/125 (8%)
Query: 103 GARSRRSNKNLSSNASNKKPPSN-STPRTGSSANKPAETPKLKNKAEGVSDKKKNNGAAG 161
G+ + RSN N ++N SN SN S RT S+ N+ + +N ++ NN
Sbjct: 145 GSNTNRSNNNNNNNRSNNNNRSNTSNNRTNSTGNRTNNGGQNRNNNRTTTNNNNNNSN-- 202
Query: 162 FLNRIKKNESVEVLRSGSGGGGGSSGSSKGGGG---GGTNTKEQKKVVNNGKGEKGKERA 218
+ N S R+GSG GGS S+ GGG GG N ++ NN +R
Sbjct: 203 -----RSNGSNNSSRNGSGRFGGSLNSNNNGGGRYRGGNNNNRRRNNRNNKSRNNKNQRI 257
Query: 219 SRYND 223
+ N+
Sbjct: 258 RQVNN 262
Score = 45.8 bits (107), Expect = 1e-04
Identities = 32/151 (21%), Positives = 60/151 (39%), Gaps = 15/151 (9%)
Query: 104 ARSRRSNKNLSSNASNKKPPSNSTPRTGSSANKPAETPKLKNKAEGVSDKKKNNGAAGFL 163
++SR SN N S+N N+ +N +S + A +N +++ NN
Sbjct: 106 SQSRNSNGNRSNNGGNRTNSNNGNRSANASRSNSA-----RNNGGSNTNRSNNNNNNNRS 160
Query: 164 NRIKKNESVEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRY-- 221
N ++ + + +G + G ++ TN +NG + + R+
Sbjct: 161 NNNNRSNTSNNRTNSTGNRTNNGGQNRNNNRTTTNNNNNNSNRSNGSNNSSRNGSGRFGG 220
Query: 222 -----NDGGG---SGSGDKRNKNIESNSKRN 244
N+GGG G+ + R +N +N RN
Sbjct: 221 SLNSNNNGGGRYRGGNNNNRRRNNRNNKSRN 251
Score = 39.7 bits (91), Expect = 0.008
Identities = 29/154 (18%), Positives = 62/154 (39%), Gaps = 3/154 (1%)
Query: 94 PKAKEKPVTGARSRRSNKNLSSNASNKKPPSNSTPRTGSSANKPAETPKLKNKAEGVSDK 153
PK++ P +R+ ++ + +N++ ++ ++G N + +++ +
Sbjct: 55 PKSQPAPAKTSRATQAVAKNVTRTANQQQSNSRHQQSGDYLNNNRNNNQNNSQSRNSNGN 114
Query: 154 KKNNGAAGFLNRIKKNESVEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEK 213
+ NNG N N S RS S G S +++ N +N +
Sbjct: 115 RSNNGG-NRTNSNNGNRSANASRSNSARNNGGSNTNRSNNNNNNNRSNNNNR-SNTSNNR 172
Query: 214 GKERASRYNDGGGSGSGDKRN-KNIESNSKRNVG 246
+R N+GG + + ++ N +NS R+ G
Sbjct: 173 TNSTGNRTNNGGQNRNNNRTTTNNNNNNSNRSNG 206
Score = 34.7 bits (78), Expect = 0.27
Identities = 28/134 (20%), Positives = 46/134 (33%), Gaps = 14/134 (10%)
Query: 111 KNLSSNASNKKPPSNSTPRTGSSANKPAETPKLKNKAEGVSDKKKNNGAAGFLNRIKKNE 170
+ L + P S P S A + A + A ++ + +LN + N
Sbjct: 44 RQLQGTTTVTHPKSQPAPAKTSRATQ-AVAKNVTRTANQQQSNSRHQQSGDYLNNNRNNN 102
Query: 171 SVEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSG 230
+ S+G+ GG TN+ NNG R++ + GGS +
Sbjct: 103 Q------NNSQSRNSNGNRSNNGGNRTNS-------NNGNRSANASRSNSARNNGGSNTN 149
Query: 231 DKRNKNIESNSKRN 244
N N + S N
Sbjct: 150 RSNNNNNNNRSNNN 163
>RTOA_DICDI (P54681) Protein rtoA (Ratio-A)
Length = 400
Score = 53.1 bits (126), Expect = 7e-07
Identities = 50/237 (21%), Positives = 84/237 (35%), Gaps = 5/237 (2%)
Query: 45 SSIPVKPSTTTFSHKGDHKPIINDKKERPSSDVKPTLKPSYS--ETDEEEPPKAKEKPVT 102
S I S +T S +G N + S+ S S ++ +A +
Sbjct: 71 SDISSSGSNSTASSEGSVSSSSNSGSQSTSNSGSEASGSSNSGSQSTSNSGSEASGSSNS 130
Query: 103 GARSRRSNKNLSSNASNKKPPSNSTPRTGSSANKPAETPKLKNKAEGVSDKKKNNGAAGF 162
G++S + N S S S S T SS + + N S N+G+
Sbjct: 131 GSQSSTDSSNSGSQGSTGSSNSGSQSSTDSSNSGSQSSTDSSNSGSQGSTGSSNSGSESS 190
Query: 163 LNRIKKNESVEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEK---GKERAS 219
+ +ES SGS GSS S G +N+ + ++ G + G +
Sbjct: 191 GSSNSGSESSGSSNSGSESSSGSSNSGSESSSGSSNSGSESSSGSSNSGSESSSGSSNSG 250
Query: 220 RYNDGGGSGSGDKRNKNIESNSKRNVGRPPKKAAETVASTKRGRESSASGGKDKRPK 276
+ G S SG + + ++ + +E+ S+ G ESS+ G K
Sbjct: 251 SESSSGSSNSGSESSSGSSNSGSESSSGSSNSGSESSGSSNSGSESSSDSGSSSDGK 307
Score = 46.6 bits (109), Expect = 7e-05
Identities = 42/186 (22%), Positives = 74/186 (39%), Gaps = 15/186 (8%)
Query: 84 SYSETDEEEPPKAKEKPVTGARSRRSNKNLSSNASNKKPPSNSTPRTGSSANKPAETPKL 143
S S + E + S + + SSN+ ++ ++ + +GSS + T
Sbjct: 61 SQSLSSEVDSSDISSSGSNSTASSEGSVSSSSNSGSQSTSNSGSEASGSSNSGSQSTSNS 120
Query: 144 KNKAEGVSDKKKNNGAAGFLNRIKKNESVEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQK 203
++A G S N+G+ S + SGS G GSS S +N+ Q
Sbjct: 121 GSEASGSS----NSGS---------QSSTDSSNSGSQGSTGSSNSGSQSSTDSSNSGSQS 167
Query: 204 KVVNNGKGEKGKERASR--YNDGGGSGSGDKRNKNIESNSKRNVGRPPKKAAETVASTKR 261
++ G +G +S G S SG + + + S S+ + G + + S+
Sbjct: 168 STDSSNSGSQGSTGSSNSGSESSGSSNSGSESSGSSNSGSESSSGSSNSGSESSSGSSNS 227
Query: 262 GRESSA 267
G ESS+
Sbjct: 228 GSESSS 233
Score = 45.4 bits (106), Expect = 2e-04
Identities = 38/181 (20%), Positives = 66/181 (35%), Gaps = 4/181 (2%)
Query: 103 GARSRRSNKNLSSNA-SNKKPPSNSTPRTGSSANKPAETPKLKNKAEGVSDKKKNNGAAG 161
G+ S SN S + S + +S + S++N +E N S N+G+ G
Sbjct: 86 GSVSSSSNSGSQSTSNSGSEASGSSNSGSQSTSNSGSEASGSSNSGSQSSTDSSNSGSQG 145
Query: 162 FLNRIKKNE--SVEVLRSGSGGGGGSSGSSKGGGGGGTNT-KEQKKVVNNGKGEKGKERA 218
S + SGS SS S G G +N+ E N+G G +
Sbjct: 146 STGSSNSGSQSSTDSSNSGSQSSTDSSNSGSQGSTGSSNSGSESSGSSNSGSESSGSSNS 205
Query: 219 SRYNDGGGSGSGDKRNKNIESNSKRNVGRPPKKAAETVASTKRGRESSASGGKDKRPKKR 278
+ G S SG + + ++ + +E+ + + S+SG + +
Sbjct: 206 GSESSSGSSNSGSESSSGSSNSGSESSSGSSNSGSESSSGSSNSGSESSSGSSNSGSESS 265
Query: 279 S 279
S
Sbjct: 266 S 266
Score = 44.3 bits (103), Expect = 3e-04
Identities = 33/169 (19%), Positives = 63/169 (36%), Gaps = 3/169 (1%)
Query: 114 SSNASNKKPPSNSTPRTGSSANKPAETPKLKNKAEGVSDKKKNNGAAGFLNRIKKNE--S 171
SSN+ ++ ++ + +GSS + + N S N+G+ + S
Sbjct: 109 SSNSGSQSTSNSGSEASGSSNSGSQSSTDSSNSGSQGSTGSSNSGSQSSTDSSNSGSQSS 168
Query: 172 VEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNG-KGEKGKERASRYNDGGGSGSG 230
+ SGS G GSS S G + E N+G + G + + G S SG
Sbjct: 169 TDSSNSGSQGSTGSSNSGSESSGSSNSGSESSGSSNSGSESSSGSSNSGSESSSGSSNSG 228
Query: 231 DKRNKNIESNSKRNVGRPPKKAAETVASTKRGRESSASGGKDKRPKKRS 279
+ + ++ + +E+ + + S+SG + + S
Sbjct: 229 SESSSGSSNSGSESSSGSSNSGSESSSGSSNSGSESSSGSSNSGSESSS 277
Score = 42.0 bits (97), Expect = 0.002
Identities = 36/168 (21%), Positives = 66/168 (38%), Gaps = 14/168 (8%)
Query: 107 RRSNKNLSSNASNKKPPSNSTPRTGSSANKPAETPKLKNKAEGVSDKKKNNGAAGFLNRI 166
++ N ++ S++ + +S+ + S +N A + EG N+G+ N
Sbjct: 51 KKKNGSIGSSSQSLSSEVDSSDISSSGSNSTASS-------EGSVSSSSNSGSQSTSNSG 103
Query: 167 KK--NESVEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDG 224
+ S +S S G +SGSS G T++ + G G + ++ ++
Sbjct: 104 SEASGSSNSGSQSTSNSGSEASGSSNSGSQSSTDSSNSGSQGSTGSSNSGSQSSTDSSNS 163
Query: 225 GGSGSGDKRNKNIE-----SNSKRNVGRPPKKAAETVASTKRGRESSA 267
G S D N + SNS +E+ S+ G ESS+
Sbjct: 164 GSQSSTDSSNSGSQGSTGSSNSGSESSGSSNSGSESSGSSNSGSESSS 211
>NONA_DROME (Q04047) No-on-transient A protein
Length = 700
Score = 52.4 bits (124), Expect = 1e-06
Identities = 46/176 (26%), Positives = 74/176 (41%), Gaps = 19/176 (10%)
Query: 106 SRRSNKNLS---SNASNKKPPSNSTPRTGSSA----NKPAETPKLKNKAEGVSDKKKNNG 158
+R N+N + +N SN+KP + ++ G +A N+PA +N+A ++K +N
Sbjct: 103 NRAGNQNRTFPGNNNSNQKPNNETSKADGPNALAKNNEPATAAAGQNQANQNANKGQNQR 162
Query: 159 AAGFLNRIKKNESVEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERA 218
N+ + + G+ GG G+ G GG G NG+G +G+
Sbjct: 163 QGQNQNQNQVHGQGNQGGPGNQGGAGNQGGQGNQGGAGNQ--------GNGQGFRGRNAG 214
Query: 219 SRYNDGGGSGSGDKRNKNIESNSKRNVGRPPKKAAETVASTKRGRESSASGGKDKR 274
+ N GGG G + + N R+ RP A + ST G GG R
Sbjct: 215 N--NQGGGFSGGPQNQQ--RDNRNRSGPRPGGGAGGAMNSTNMGGGGGGGGGGGPR 266
Score = 35.8 bits (81), Expect = 0.12
Identities = 30/149 (20%), Positives = 59/149 (39%), Gaps = 13/149 (8%)
Query: 57 SHKGDHKPIINDKKERPSSDVKPTLKPSYSETDEEEPPKAKEKPVTGARSRRSNKNLSSN 116
++ + KP K + + +P+ + + + + K + + N+N
Sbjct: 115 NNNSNQKPNNETSKADGPNALAKNNEPATAAAGQNQANQNANKGQNQRQGQNQNQNQVHG 174
Query: 117 ASNKKPPSNSTPRTGSSANKPAETPK--LKNKAEGVSDKKKNNG-------AAGFLNRIK 167
N+ P N G + N+ + + N+ G + +N G + G N+ +
Sbjct: 175 QGNQGGPGNQ----GGAGNQGGQGNQGGAGNQGNGQGFRGRNAGNNQGGGFSGGPQNQQR 230
Query: 168 KNESVEVLRSGSGGGGGSSGSSKGGGGGG 196
N + R G G GG + ++ GGGGGG
Sbjct: 231 DNRNRSGPRPGGGAGGAMNSTNMGGGGGG 259
>HXB3_MOUSE (P09026) Homeobox protein Hox-B3 (Hox-2.7) (MH-23)
Length = 433
Score = 52.0 bits (123), Expect = 2e-06
Identities = 43/134 (32%), Positives = 51/134 (37%), Gaps = 26/134 (19%)
Query: 70 KERPSSDVKPTLKPSYSETDEEEPPKAKEKPVTGARSRRSNKNLSSNASNKKPP-----S 124
KE S ++P L P PP P S SN N S PP S
Sbjct: 67 KELNGSCMRPGLAPEPLPAPPGSPP-----PSAAPTSTTSNSNNGGGPSKSGPPKCGAGS 121
Query: 125 NST--PRTGSSANKPAETPKLKNKAEGVSDKKKNNGAAGFLNRIKKNESVEVLRSGSGGG 182
NST + + +T KLKN + G ++ G G G GGG
Sbjct: 122 NSTLTKQIFPWMKESRQTSKLKNSSPGTAEGCGGGGGGG--------------GGGGGGG 167
Query: 183 GGSSGSSKGGGGGG 196
GGSSG GGGGGG
Sbjct: 168 GGSSGGGGGGGGGG 181
>PHR2_HUMAN (O75167) Phosphatase and actin regulator 2
Length = 634
Score = 51.2 bits (121), Expect = 3e-06
Identities = 35/126 (27%), Positives = 57/126 (44%), Gaps = 10/126 (7%)
Query: 8 QSNTITQKSDSLPPNTPLSRPDSLSKHKPPILVCRKRSSIPVKPSTTTFSHKGDHKPIIN 67
++++ T + +LPP+ P P SK KP K+S +P K +T SHKGD P I
Sbjct: 144 ENHSETPAAPALPPSAP---PKPRSKPKP------KKSPVPPKGATAGASHKGDEVPPIK 194
Query: 68 DKKERPSSDVK-PTLKPSYSETDEEEPPKAKEKPVTGARSRRSNKNLSSNASNKKPPSNS 126
+ P P KP+ T E + K TG+++ S S+++ K
Sbjct: 195 KNTKAPGKQAPVPPPKPASRNTTREAAGSSHSKKTTGSKASASPSTSSTSSRPKASKETV 254
Query: 127 TPRTGS 132
+ + G+
Sbjct: 255 SSKAGT 260
>NP14_RAT (P41777) Nucleolar phosphoprotein p130 (Nucleolar 130 kDa
protein) (140 kDa nucleolar phosphoprotein) (Nopp140)
(Nucleolar and coiled-body phosphoprotein 1)
Length = 704
Score = 50.8 bits (120), Expect = 4e-06
Identities = 61/277 (22%), Positives = 105/277 (37%), Gaps = 30/277 (10%)
Query: 6 QAQSNTITQKSDSLPPNTPLSRPDSLSKH---------KPPILVCRKRSSIPVKPSTTTF 56
+A+S++ + SDS P ++P S +K KPP P
Sbjct: 368 KAESSSDSSDSDSSEDEAP-AKPVSATKSPLSKPAVTPKPPAAKAVATPKQPAGSGQKPQ 426
Query: 57 SHKGDHKPIINDKKERPSSDVKPTLK----PSYSETDEEEPP-KAKEKPVTGARSRRSNK 111
S K D + ++E SS+ + T K P T + P AK+ P G S ++
Sbjct: 427 SRKADSS---SSEEESSSSEEEATKKSVTTPKARVTAKAAPSLPAKQAPRAGGDSSSDSE 483
Query: 112 NLSSNASNKKPPSNSTPRTGSSANKPAETPKLKNKAEGVSDKKKNNGAAGFLNRIKKNES 171
+ SS K PP + + A P TP K AE S + ++ + K+++
Sbjct: 484 SSSSEEEKKTPPKPPAKKKAAGAAVPKPTPVKKAAAESSSSSSSSEDSSEEEKKKPKSKA 543
Query: 172 VEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSGD 231
++G G +S+ G G + +E++ N K K GSG
Sbjct: 544 TPKPQAGKANG---VPASQNGKAGKESEEEEEDTEQNKKAAGTKP---------GSGKKR 591
Query: 232 KRNKNIESNSKRNVGRPPKKAAETVASTKRGRESSAS 268
K N+ + + + + T K+G + ++S
Sbjct: 592 KHNETADEAATPQSKKVKLQTPNTFPKRKKGEKRASS 628
Score = 37.7 bits (86), Expect = 0.032
Identities = 49/279 (17%), Positives = 102/279 (35%), Gaps = 25/279 (8%)
Query: 26 SRPDSLSKHKPPILVCRKRSSIPVKPSTTTFSHKGDHKPIINDKKERPSSDV-------- 77
++P +K +P + SS S+++ + + K KK P V
Sbjct: 207 AKPGPPAKAQPKAANGKAGSSSSSSSSSSSDDSEEEKKAAAPLKKTAPKKQVVAKAPVKV 266
Query: 78 --KPTLKPSYSETDEEEPPKAKEKPVTGARSRRSNKNLSSNASNKKPPSNSTPRTGSSAN 135
PT K S SE E + ++KP+ S+ S + +KK +P+ ++
Sbjct: 267 TAAPTQKSSSSEDSSSEEEEEQKKPMKKKAGPYSSVPPPSVSLSKKSVGAQSPKKAAAQT 326
Query: 136 KPAE-TPKLKNKAEGVSDKKKNNGAAGFLNRIKKNESVEVLRSGSGGGGGSSGSSKGGGG 194
+PA+ + +++ S+++K A +++ + ++ S S SS+
Sbjct: 327 QPADSSADSSEESDSSSEEEKKTPAKTVVSKTPAKPAPVKKKAESSSDSSDSDSSEDEAP 386
Query: 195 GG--------------TNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSGDKRNKNIESN 240
T K V K G + + S S ++ + + E
Sbjct: 387 AKPVSATKSPLSKPAVTPKPPAAKAVATPKQPAGSGQKPQSRKADSSSSEEESSSSEEEA 446
Query: 241 SKRNVGRPPKKAAETVASTKRGRESSASGGKDKRPKKRS 279
+K++V P + A + +++ +GG + S
Sbjct: 447 TKKSVTTPKARVTAKAAPSLPAKQAPRAGGDSSSDSESS 485
Score = 37.0 bits (84), Expect = 0.054
Identities = 53/292 (18%), Positives = 94/292 (32%), Gaps = 31/292 (10%)
Query: 13 TQKSDSLPPNTPLSRPDSLSKHKPPILVCRKRSSIPVKPSTTTFSHKGDHKPIINDKKER 72
TQ +DS ++ S S + K P ++ P D + + E
Sbjct: 326 TQPADSSADSSEESDSSSEEEKKTPAKTVVSKTPAKPAPVKKKAESSSDSSDSDSSEDEA 385
Query: 73 PSSDVKPTLKPSYSETDEEEPPKAKEKPVTGARSRRSNKNLSSNASNKKPPSNSTPRTGS 132
P+ V T P +PP AK + K S A + S+
Sbjct: 386 PAKPVSATKSPLSKPAVTPKPPAAKAVATPKQPAGSGQKPQSRKADSSSSEEESSSSEEE 445
Query: 133 SANKPAETPKLKNKAEGV------------SDKKKNNGAAGFLNRIKKNESVEVLRSGSG 180
+ K TPK + A+ D ++ ++ K + +G
Sbjct: 446 ATKKSVTTPKARVTAKAAPSLPAKQAPRAGGDSSSDSESSSSEEEKKTPPKPPAKKKAAG 505
Query: 181 -----------GGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGS 229
SS SS K++ K K + GK + G +G
Sbjct: 506 AAVPKPTPVKKAAAESSSSSSSSEDSSEEEKKKPKSKATPKPQAGKANGVPASQNGKAG- 564
Query: 230 GDKRNKNIESNSKRNVGRPPKKAAETVASTKRGRESSASGGKDKRPKKRSKK 281
K ++ E ++++N KKAA T + + R+ + + + P+ + K
Sbjct: 565 --KESEEEEEDTEQN-----KKAAGTKPGSGKKRKHNETADEAATPQSKKVK 609
>IF2_PROMA (Q7VA20) Translation initiation factor IF-2
Length = 1134
Score = 50.8 bits (120), Expect = 4e-06
Identities = 69/292 (23%), Positives = 106/292 (35%), Gaps = 45/292 (15%)
Query: 20 PPNTPLSRPDSLSKHKPPILVCRKRSSIPVKPSTTTFSHKGDHKPIINDKKERPSSDVKP 79
PP+ R D++ K P I K +S+ V+P+ S +P I P+ +KP
Sbjct: 121 PPSAAKQRVDAIKKPTPSI---SKNNSLKVQPTIKKPSLVSPKQPNIPSPPIAPNKGIKP 177
Query: 80 TLKPSYSETDEEEPPKAKEKPVTGARSRRSNKNLSSNASNKKP-PSNSTPRTGSSANKP- 137
T+K S + E K K KP ++ + SS+ N+ P S P NKP
Sbjct: 178 TIKRQDSNNENLETNKTKAKPNIVSKPQARQIKQSSDLINRSPKTSPKQPIQEIQTNKPK 237
Query: 138 ------AETPKLKNKAEGVSDKKKNNGAAGFLNRIKKNESVEVLRSGSGGGGGS------ 185
A P+ K +++ + K NN G N+ K + + G GS
Sbjct: 238 APQRPIAPPPRPKVQSQ-FNQKPGNNNLRGGPNQRK-----GIPQGAPSGQPGSTKHPRN 291
Query: 186 --SGSSKG------------------GGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGG 225
+GS KG GG G + ++ N G + A R GG
Sbjct: 292 LPTGSYKGNRVELVGAPIRRNTKPDNGGRGARDGNFRQGGPNQGPPISRQGGARRQEGGG 351
Query: 226 GSGSGDKRNKNIESNSKRNVGRPPKKAAETVASTKRGRESSASGGKDKRPKK 277
G G + + ++ V P + + T G +K PKK
Sbjct: 352 GRGQQMRPRTGMPPGMRKPVA--PGELMQLQKPTSSATPPIKRGDLNKGPKK 401
>NFM_BOVIN (O77788) Neurofilament triplet M protein (160 kDa
neurofilament protein) (Neurofilament medium
polypeptide) (NF-M) (Fragment)
Length = 810
Score = 50.1 bits (118), Expect = 6e-06
Identities = 56/229 (24%), Positives = 87/229 (37%), Gaps = 35/229 (15%)
Query: 49 VKPSTTTFSHKGDHKPIINDKKERPSSDVKPTLKPSYSETDEEEPPKAKEKPVTGARSRR 108
VKP + KG+ K +K E + K + K +E EE+P EK A S
Sbjct: 584 VKPKAEAGAEKGEQK----EKVEEEKKEAKESPKEEKAEKKEEKPKDVPEK--KKAESPV 637
Query: 109 SNKNLSSNASNKKPPSNSTPRTGSSANKPAETPKLKNKAEGVSDKKKNNGAAGFLNRIKK 168
++ KP S + KP E K K K E V K++ +K+
Sbjct: 638 KAESPVKEEVPAKPVKVSPEKEAKEEEKPQEKEKEKEKVEEVGGKEEGG--------LKE 689
Query: 169 NESVEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNG----------KGEKGKER- 217
+ ++ +G G +K G GG +E+K VV NG G+K +E+
Sbjct: 690 SRKEDIAINGEVEGKEEEQETKEKGSGG---EEEKGVVTNGLDVSPGDEKKGGDKSEEKV 746
Query: 218 -----ASRYNDGGGSGSGDKRNKNIESNSKRNVGRPPKKAAETVASTKR 261
+ GG G+ K++ K V + E + STK+
Sbjct: 747 VVTKMVEKITSEGGDGATKYITKSVTVTQK--VEEHEETFEEKLVSTKK 793
Score = 34.3 bits (77), Expect = 0.35
Identities = 54/291 (18%), Positives = 105/291 (35%), Gaps = 39/291 (13%)
Query: 8 QSNTITQKSDSLPPNTPLSRPDSLSKHKPPILVCRKRSSIPVKPSTTTFSHKGDHKPIIN 67
+ + +K++ + P L+ + K + ++ PV S TT S +
Sbjct: 473 EEKKMEEKAEEVAPKEELAAEAKVEKPE--------KAKSPVAKSPTTKSPTAKSPEAKS 524
Query: 68 DKKERPSSDVKPTLKPSYSETDEEEPPKAK--EKPVTGARSRRSNKNLSSNASNKKPPSN 125
+ + P++ PT K +++ + P+AK E A+S + + + + K P
Sbjct: 525 PEAKSPTAK-SPTAKSPVAKSPTAKSPEAKSPEAKSPTAKSPTAKSPAAKSPAPKSPVEE 583
Query: 126 STPRTGSSANKPAETPKLKN-------------------KAEGVSDKKKNNGAAGFLNRI 166
P+ + A K + K++ K + V +KKK + +
Sbjct: 584 VKPKAEAGAEKGEQKEKVEEEKKEAKESPKEEKAEKKEEKPKDVPEKKKAESPVKAESPV 643
Query: 167 KKNESVEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGG 226
K+ + ++ +K KE++KV G E+G + SR D
Sbjct: 644 KEEVPAKPVKVSP------EKEAKEEEKPQEKEKEKEKVEEVGGKEEGGLKESRKEDIAI 697
Query: 227 SGSGDKRNKNIESNSKRNVGRPPKKAAETVASTKRGRESSASGGKDKRPKK 277
+G + + + E+ K + G K G E G DK +K
Sbjct: 698 NGEVEGKEEEQETKEKGSGGEEEKGVVTNGLDVSPGDEKK---GGDKSEEK 745
>MACS_BOVIN (P12624) Myristoylated alanine-rich C-kinase substrate
(MARCKS) (ACAMP-81)
Length = 331
Score = 49.7 bits (117), Expect = 8e-06
Identities = 46/211 (21%), Positives = 75/211 (34%), Gaps = 15/211 (7%)
Query: 70 KERPSSDVKPTLKPSYSETDEEEP--------PKAKEKPVTGARSRRSNKNLSSNASNKK 121
KE P++ P+ +E DE P KE PV G + + + +
Sbjct: 68 KEEPAAAGSGAASPAAAEKDEPAAAAPDAGASPVEKEAPVEGGAAEPGSPTAAEGEAASA 127
Query: 122 PPSNSTPRT--GSSANKPAETPKLKNKAEGVSDKKKNNGAAGFLNRIKKNESVEVLRSGS 179
S+S+P+ G++ + ETPK K K K +G + N+ + E E G+
Sbjct: 128 ASSSSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEA--EGA 185
Query: 180 GGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSGDKRNKNIES 239
G G + GG E G+E A+ G+ GD + E
Sbjct: 186 AGASAEGGKDEASGGAAAAAGEAGAAPGEPTAAPGEEAAAGEE---GAAGGDPQEAKPEE 242
Query: 240 NSKRNVGRPPKKAAETVASTKRGRESSASGG 270
+ P + A+ V + E + G
Sbjct: 243 AAVAPEKPPASEEAKAVEEPSKAEEKAEEAG 273
>SERA_ENTHI (P21138) Serine-rich 25 kDa antigen protein (SHEHP)
(SREHP)
Length = 233
Score = 49.3 bits (116), Expect = 1e-05
Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 15/149 (10%)
Query: 13 TQKSDSLPPNTPLSRPDSLSKHKPPILVCRKRSSIPVKPSTTTFSHKGDHKPIINDKKER 72
+ S+S + P ++P++ S KP K + P S S K D+KP E
Sbjct: 76 SDNSESSSSDKPDNKPEASSSDKPEASSSDKPDNKPEASS----SDKPDNKP------EA 125
Query: 73 PSSDVKPTLKPSYSETDE-EEPPKAKEKPVTGARSRRSNKNLSSNASNKKPPSNSTPR-T 130
SSD KP KP S +D+ + P+A + S+ N +S KP ++ST +
Sbjct: 126 SSSD-KPDNKPEASSSDKPDNKPEASSSDKPDNKPEASSTNKPEASSTNKPEASSTNKPE 184
Query: 131 GSSANKP--AETPKLKNKAEGVSDKKKNN 157
SS NKP + T +K+ SD NN
Sbjct: 185 ASSTNKPEASSTSNSNDKSGSSSDNDNNN 213
Score = 41.6 bits (96), Expect = 0.002
Identities = 44/160 (27%), Positives = 66/160 (40%), Gaps = 16/160 (10%)
Query: 42 RKRSSIPVKPSTTTFSHKGDHKPIINDKKERPSSDVKPTLKPSYSETDEEE---PPKAKE 98
+ S+ P S D K +D E SSD KP KP S +D+ E K
Sbjct: 51 KSSSAKPESSSNEDNEDDEDEKASSSDNSESSSSD-KPDNKPEASSSDKPEASSSDKPDN 109
Query: 99 KPVTGARSRRSNK--NLSSNASNKKPPSNSTPR-----TGSSANKPAETPKLK--NKAEG 149
KP + + NK SS+ + KP ++S+ + SS++KP P+ NK E
Sbjct: 110 KPEASSSDKPDNKPEASSSDKPDNKPEASSSDKPDNKPEASSSDKPDNKPEASSTNKPEA 169
Query: 150 VSDKKKNNGAAGFLNRIKKNESVEVLRSGSGGGGGSSGSS 189
S K A N+ + + + + S + SGSS
Sbjct: 170 SSTNKPE---ASSTNKPEASSTNKPEASSTSNSNDKSGSS 206
Score = 38.9 bits (89), Expect = 0.014
Identities = 42/180 (23%), Positives = 69/180 (38%), Gaps = 14/180 (7%)
Query: 68 DKKERPSSDVKPTLKPSYSETDEEEPPKAKEKPVTGARSRRSNKNLSSNASNKKPPSNST 127
++KE+ SS + +E DE+E + + + + + NK +S++ + S+
Sbjct: 47 EEKEKSSSAKPESSSNEDNEDDEDEKASSSDNSESSSSDKPDNKPEASSSDKPEASSSDK 106
Query: 128 PRT---GSSANKPAETPKLKNKAEGVSDKKKNNGAAGFLNRIKKNESVEVLRSGSGGGGG 184
P SS++KP P+ + SDK N A + K + E S
Sbjct: 107 PDNKPEASSSDKPDNKPEASS-----SDKPDNKPEAS--SSDKPDNKPEASSSDKPDNKP 159
Query: 185 SSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERA---SRYNDGGGSGSGDKRNKNIESNS 241
+ S+ TN E K A S ND GS S D N N+++ S
Sbjct: 160 EASSTNKPEASSTNKPEASSTNKPEASSTNKPEASSTSNSNDKSGS-SSDNDNNNLDAAS 218
Score = 29.6 bits (65), Expect = 8.6
Identities = 28/134 (20%), Positives = 55/134 (40%), Gaps = 12/134 (8%)
Query: 146 KAEGVSDKKKNNGAAGFLNRIKKNESVEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKV 205
K E +K+K++ A + + NE E ++ S SS S K ++ ++ +
Sbjct: 42 KLEEAEEKEKSSSAKPESSSNEDNEDDEDEKASSSDNSESSSSDKPDNKPEASSSDKPEA 101
Query: 206 VNNGKGEKGKERASRYNDGGGSGSGDKRNKNIESNSKRNVGRPPKKAAETVASTKRGRES 265
++ K + E + S DK + E++S P+ ++ K E+
Sbjct: 102 SSSDKPDNKPE----------ASSSDKPDNKPEASSSDKPDNKPEASSSDKPDNK--PEA 149
Query: 266 SASGGKDKRPKKRS 279
S+S D +P+ S
Sbjct: 150 SSSDKPDNKPEASS 163
>HXB3_HUMAN (P14651) Homeobox protein Hox-B3 (Hox-2G) (Hox-2.7)
Length = 431
Score = 49.3 bits (116), Expect = 1e-05
Identities = 42/139 (30%), Positives = 50/139 (35%), Gaps = 33/139 (23%)
Query: 70 KERPSSDVKPTLKPSYSETDEEEPPKAKEKPVTGARSRRSNKNLSSNASNKKPPSNSTPR 129
KE S ++P L P PP P S SN + S PP P
Sbjct: 67 KELNGSCMRPGLAPETLSAPPGSPP-----PSAAPTSATSNSSNGGGPSKSGPPKCG-PG 120
Query: 130 TGSSANKPA--------ETPKLKNKAEGVSDKKKNNGAAGFLNRIKKNESVEVLRSGSGG 181
T S+ K +T KLKN + G ++ G G GG
Sbjct: 121 TNSTLTKQIFPWMKESRQTSKLKNNSPGTAEGCGGGG-------------------GGGG 161
Query: 182 GGGSSGSSKGGGGGGTNTK 200
GGGS GS GGGGGG K
Sbjct: 162 GGGSGGSGGGGGGGGGGDK 180
>ATRX_PONPY (Q7YQM3) Transcriptional regulator ATRX (X-linked helicase
II) (X-linked nuclear protein) (XNP)
Length = 2492
Score = 49.3 bits (116), Expect = 1e-05
Identities = 44/202 (21%), Positives = 76/202 (36%), Gaps = 9/202 (4%)
Query: 86 SETDEEEPPKAKEKPVTGARSRRSNKNLSSNASNKKPPSNSTPRTGSSANKPAETPKLKN 145
SE D+++ K E+ + ++ + + + P + P ++KN
Sbjct: 978 SEDDKKQSKKGTEEKKKTSDFKKKVIKMEQQYESSSDGTEKLPEREEICHFPKGIKQIKN 1037
Query: 146 KAEGVSDKKKNNGAAGFLNRIKKNESVEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKV 205
G +D +K N KK+E + +G G S G +E+K+
Sbjct: 1038 ---GTTDGEKKNKKIRDKTSKKKDELSDYAEKSTGKGDSCDSSEDKKSKNGAYGREKKRC 1094
Query: 206 VNNGKGEKGKERAS-----RYN-DGGGSGSGDKRNKNIESNSKRNVGRPPKKAAETVAST 259
GK + ++ S +Y+ G S DKR K IE +RN+ S+
Sbjct: 1095 TLLGKSSRKRQDCSSSDTEKYSMKEDGCNSSDKRLKRIELRERRNLSSKRNTKEIQSGSS 1154
Query: 260 KRGRESSASGGKDKRPKKRSKK 281
E S+ K K+ + SKK
Sbjct: 1155 SSDAEESSEDNKKKKQRTSSKK 1176
Score = 36.2 bits (82), Expect = 0.092
Identities = 46/220 (20%), Positives = 91/220 (40%), Gaps = 26/220 (11%)
Query: 83 PSYSETDEEEPPKAKEKPVTGARSRRSNKNLSSNASNKKPPSNSTPRTGSS--ANKPAET 140
P S +DEE KEK R+ +K SS+++ P N P++ S ++ +++
Sbjct: 672 PVTSNSDEECNETVKEKQKLSVPVRKKDKRNSSDSAIDNPKPNKLPKSKQSETVDQNSDS 731
Query: 141 PKLKNKAEGVSDKKKNNGAAGFLNRIKKN-ESVEVLRSGSG-GGGGSSGSSKGGGGGGTN 198
++ + VS ++ + +N I N +++ L++ +G G G +
Sbjct: 732 DEMLAILKEVSRMSHSSSSDTDINEIHTNHKTLYDLKTQAGKDDKGKRKRKSSTSGSDFD 791
Query: 199 TKEQKKVVNNGKGEKGKERASRYNDGGGSGSGDKRNKNIESNSKRNVGRPPKK------- 251
TK+ K ++ +K ++ S S + K I+S SK R KK
Sbjct: 792 TKKGKSAKSSIISKKKRQTQSE-----SSNYDSELEKEIKSMSKIGAARTTKKRIPNTKD 846
Query: 252 --AAETVASTKRGRE--------SSASGGKDKRPKKRSKK 281
++E +K+G + +S G D +K+ ++
Sbjct: 847 FDSSEDEKHSKKGMDNQGHKNLKTSQEGSSDDAERKQERE 886
Score = 30.8 bits (68), Expect = 3.9
Identities = 47/226 (20%), Positives = 75/226 (32%), Gaps = 56/226 (24%)
Query: 67 NDKKERPSSDVKPTLKPSY-------------SETDEEEPPKAKEKPVTGARSRRSNKNL 113
N SD + + KP Y E+ EE+ K KE R+RR +
Sbjct: 1318 NQVNSESDSDSEESKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKVSSE 1377
Query: 114 SSNASN----------KKPPSNSTPRTGSSANKPAETPKLKNKAEGVSDKKKNNGAAGFL 163
S S+ + PRT S A+ +L+ KKK
Sbjct: 1378 DSEDSDFQESGVSEEVSESEDEQRPRTRS-----AKKAELEENQRSYKQKKKRR------ 1426
Query: 164 NRIKKNESVEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYND 223
RIK E SS +E+K+ + E+ +E +D
Sbjct: 1427 -RIKVQED----------------SSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDENDD 1469
Query: 224 GGGSGSGDKRNKNIESNSK-----RNVGRPPKKAAETVASTKRGRE 264
G G K+ + I + K +N + ++ + +A +R RE
Sbjct: 1470 SKSPGKGRKKIRKILKDDKLRTETQNALKEEEERRKRIAERERERE 1515
>SFR4_HUMAN (Q08170) Splicing factor, arginine/serine-rich 4
(Pre-mRNA splicing factor SRP75) (SRP001LB)
Length = 494
Score = 48.9 bits (115), Expect = 1e-05
Identities = 51/254 (20%), Positives = 101/254 (39%), Gaps = 18/254 (7%)
Query: 44 RSSIPVKPSTTTFSHKGDHKPIINDKKERPSSDVKPTLKPSYSETDEEEPPKAKEKPVTG 103
RS + S + S G K + + R S + K K K + +
Sbjct: 193 RSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSRSRSKKEKSRSPSK 252
Query: 104 ARSRRSNKNLSSNASNKKPPSNSTPRTGSSANKPAETPKLKNKAEGVS-----DKKKNNG 158
+SR + + + S K + + + KP ++K++ S +++
Sbjct: 253 EKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKSKSRSRSQERRVEEE 312
Query: 159 AAGFLNRIKKNE-SVEVLRSGSGGGGGSSGSS--------KGGGGGGTNTKEQKKVVNNG 209
G ++R + E S+ RS S GGS S K G + + + + +
Sbjct: 313 KRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDKRKGRKRSREESRSRSRSRS 372
Query: 210 KGEKGKERASRYNDGGGSGSGDKRNKNIESNSK---RNVGRPPKKAAETVASTKRGRESS 266
K E+ ++R S+ + GS K+ S S+ R+V + ++ A++ +S + GR S
Sbjct: 373 KSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVSK-EREHAKSESSQREGRGES 431
Query: 267 ASGGKDKRPKKRSK 280
+ G ++ + RS+
Sbjct: 432 ENAGTNQETRSRSR 445
Score = 46.2 bits (108), Expect = 9e-05
Identities = 53/229 (23%), Positives = 92/229 (40%), Gaps = 27/229 (11%)
Query: 66 INDKKERPSSDVKP--TLKPSYSETDEEEPPKAKEKPVTGARSRRSNKNLSSNASNKKPP 123
+N +K R D KP + SYS + +++ + +RSR + S + S +
Sbjct: 165 VNGRKIRLVED-KPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSR 223
Query: 124 SNSTPRTGSSANKPAETPKLKNKAEGVSDKK--KNNGAAG---------FLNRIKKNESV 172
S S R+ S + + + K K+ S +K + +AG +I+ N++V
Sbjct: 224 SGSRSRSKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNV 283
Query: 173 EVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSGDK 232
+S S S S+ +E++ V+ G+ ++ R SR GS +
Sbjct: 284 GKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSR 343
Query: 233 RNKNIESNSKRNVGRPPKKAAETVASTKRGRESSASGGKDKRPKKRSKK 281
+S KR GR KR RE S S + + +RS+K
Sbjct: 344 SRSRSKSKDKRK-GR------------KRSREESRSRSRSRSKSERSRK 379
Score = 39.3 bits (90), Expect = 0.011
Identities = 61/285 (21%), Positives = 110/285 (38%), Gaps = 26/285 (9%)
Query: 9 SNTITQKSDSLPPNTPLSRPDSLSKHKPPILVCRKRSSIPVKPSTTTFSH---------- 58
S + KS S + SR S S+ + +++S P K + + SH
Sbjct: 211 SKSSHSKSRSRSRSGSRSRSKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSK 270
Query: 59 -KGDHKPIINDKKERPSSDVKPTLKP-SYSETDEEEPPKAKEKPVTGARSRRSNKNLSSN 116
+ + K ND +P S K S S + +E +EK + +R R K+L +
Sbjct: 271 DQAEEKIQNNDNVGKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQS 330
Query: 117 ASNKKPPSNSTPRTGSSANKPAETPKLKNKAEGVSDKKKNNGAAGFLNRIK-KNESVEVL 175
S + S R+ S + K K+K +G +K++ + +R + K+E
Sbjct: 331 RSRSRSKGGSRSRSRSRS-------KSKDKRKG---RKRSREESRSRSRSRSKSERSRKR 380
Query: 176 RSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGG--SGSGDKR 233
S GSS K + ++ + V+ + E + R G +G+ +
Sbjct: 381 GSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVSKEREHAKSESSQREGRGESENAGTNQET 440
Query: 234 NKNIESNSKRNVGRPPKKAAETVASTK-RGRESSASGGKDKRPKK 277
SNSK P + + + +++K R R S S + P +
Sbjct: 441 RSRSRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSR 485
>NP14_HUMAN (Q14978) Nucleolar phosphoprotein p130 (Nucleolar 130
kDa protein) (140 kDa nucleolar phosphoprotein)
(Nopp140) (Nucleolar and coiled-body phosphoprotein 1)
Length = 699
Score = 48.9 bits (115), Expect = 1e-05
Identities = 69/291 (23%), Positives = 108/291 (36%), Gaps = 33/291 (11%)
Query: 9 SNTITQKSDSLPPNTPLSRPDSLS--KHKP-PILVCRKRSSIPVKPSTTTFSHKGDHKPI 65
+ T T+KS S ++ + K+KP P S+ P K S G P
Sbjct: 257 ATTPTRKSSSSEDSSSDEEEEQKKPMKNKPGPYSYAPPPSAPPPKKSL------GTQPPK 310
Query: 66 INDKKERPSSDVKPTLKPSYSETDEEEPP-------KAKEKPVTGARSRRSNKNLSSNAS 118
+K++P + + S S ++EE+ P KA KP ++ S+ + S + S
Sbjct: 311 KAVEKQQPVESSEDSSDESDSSSEEEKKPPTKAVVSKATTKPPPAKKAAESSSDSSDSDS 370
Query: 119 NK--KPPSNSTPRTGSSANKPAETPKLKNKAEGVSDKKKNNGAAGFLNRIKKNESVEVLR 176
++ + PS T +S+NKPA T K + K+ G L R + S E
Sbjct: 371 SEDDEAPSKPAGTTKNSSNKPAVTTKSPAVKPAAAPKQPVGGGQKLLTRKADSSSSE--- 427
Query: 177 SGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSGDKRNKN 236
SS S + T + K K+ D +
Sbjct: 428 ------EESSSSEEEKTKKMVATTKPKATAKAALSLPAKQAPQGSRDSSSDSDSSSSEEE 481
Query: 237 IESNSKRNVGRPPKKAA-----ETVASTKRGR-ESSASGGKDKRPKKRSKK 281
E SK V + P+K A AS K+G+ ESS S D ++ +K
Sbjct: 482 EEKTSKSAVKKKPQKVAGGAAPSKPASAKKGKAESSNSSSSDDSSEEEEEK 532
Score = 40.0 bits (92), Expect = 0.006
Identities = 58/273 (21%), Positives = 104/273 (37%), Gaps = 19/273 (6%)
Query: 7 AQSNTITQKSDSLPPNTPLSRPDSLSKH---KPPILVCRKRSSIPVKPSTTTFSHKGDHK 63
A+S++ + SDS + S+P +K+ KP + S VKP+ G +
Sbjct: 359 AESSSDSSDSDSSEDDEAPSKPAGTTKNSSNKPAVTT----KSPAVKPAAAPKQPVGGGQ 414
Query: 64 PIINDKKERPSSDVKPTLKPSYSETDEEEPPKAKEKPVTGARSRRS----NKNLSSNASN 119
++ K + SS+ + S SE ++ + A KP A++ S S S+
Sbjct: 415 KLLTRKADSSSSEEES----SSSEEEKTKKMVATTKPKATAKAALSLPAKQAPQGSRDSS 470
Query: 120 KKPPSNSTPRTGSSANKPAETPKLKNKAEGVSDKKK---NNGAAGFLNRIKKNESVEVLR 176
S+S+ +K A K + A G + K G A N ++S E
Sbjct: 471 SDSDSSSSEEEEEKTSKSAVKKKPQKVAGGAAPSKPASAKKGKAESSNSSSSDDSSEEEE 530
Query: 177 SG-SGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSGDKRNK 235
G G + K G + K N+ + E+ K++A+ GS K+N+
Sbjct: 531 EKLKGKGSPRPQAPKANGTSALTAQNGKAAKNSEEEEEEKKKAAVVVSKSGSLKKRKQNE 590
Query: 236 NIESNSKRNVGRPPKKAAETVASTKRGRESSAS 268
+ + + T K+G + ++S
Sbjct: 591 AAKEAETPQAKKIKLQTPNTFPKRKKGEKRASS 623
Score = 36.2 bits (82), Expect = 0.092
Identities = 45/223 (20%), Positives = 83/223 (37%), Gaps = 19/223 (8%)
Query: 67 NDKKERPSSDVKPTLKPSYSETDEEEPPKAKEKPVTGARSRRSNKNLSSNASNKKPPSNS 126
+ ++ P + KP + P + + PP KP A + K SS++S+ S+S
Sbjct: 173 SSSEDEPPKNQKPKITPVTVKAQTKAPP----KPARAAPKIANGKAASSSSSS----SSS 224
Query: 127 TPRTGSSANKPAETPK---------LKNKAEGVSDKKKNNGAAGFLNRIKKNESVEVLRS 177
+ S K A TPK K + + + + ++ + ++ E + +++
Sbjct: 225 SSSDDSEEEKAAATPKKTVPKKQVVAKAPVKAATTPTRKSSSSEDSSSDEEEEQKKPMKN 284
Query: 178 GSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSGDKRNKNI 237
G + S T+ KK V + + E +S +D S +K+
Sbjct: 285 KPGPYSYAPPPSAPPPKKSLGTQPPKKAVEKQQPVESSEDSSDESD--SSSEEEKKPPTK 342
Query: 238 ESNSKRNVGRPPKKAAETVASTKRGRESSASGGKDKRPKKRSK 280
SK PP K A +S +SS +P +K
Sbjct: 343 AVVSKATTKPPPAKKAAESSSDSSDSDSSEDDEAPSKPAGTTK 385
Score = 31.2 bits (69), Expect = 3.0
Identities = 51/243 (20%), Positives = 86/243 (34%), Gaps = 30/243 (12%)
Query: 3 TFGQAQSNTITQKSDSLPPNTPLSRPDSLSKHKPPILVCRKRSSIPVKPSTTTFSHKGDH 62
T + +T KS ++ P +P + L+ RK S + +++ +
Sbjct: 384 TKNSSNKPAVTTKSPAVKPAAAPKQPVGGGQK----LLTRKADSSSSEEESSSSEEEKTK 439
Query: 63 KPIINDKKER--------PSSDVKPTLKPSYSETDEEEPPKAKEKPVTGARSRRSNKNL- 113
K + K + P+ + S S++D + +EK A ++ K
Sbjct: 440 KMVATTKPKATAKAALSLPAKQAPQGSRDSSSDSDSSSSEEEEEKTSKSAVKKKPQKVAG 499
Query: 114 ----SSNASNKKPPSNSTPRTGSSANKPAETPKLKNKAEGVSDKKKNNGAAGFL----NR 165
S AS KK + S+ + S + E KLK K K NG +
Sbjct: 500 GAAPSKPASAKKGKAESSNSSSSDDSSEEEEEKLKGKGSPRPQAPKANGTSALTAQNGKA 559
Query: 166 IKKNESVEVLRSGSGGGGGSSGSSK----GGGGGGTNTKEQKKVV-----NNGKGEKGKE 216
K +E E + + SGS K T + KK+ K +KG++
Sbjct: 560 AKNSEEEEEEKKKAAVVVSKSGSLKKRKQNEAAKEAETPQAKKIKLQTPNTFPKRKKGEK 619
Query: 217 RAS 219
RAS
Sbjct: 620 RAS 622
>DAH1_HUMAN (Q9UI36) Dachshund homolog 1 (Dach1)
Length = 758
Score = 48.9 bits (115), Expect = 1e-05
Identities = 42/179 (23%), Positives = 68/179 (37%), Gaps = 25/179 (13%)
Query: 98 EKPVTGARSRRSNKNLSSNASNKKPPSNSTPRT-GSSANKPAETPKLKNKAEGVSDKKKN 156
+ P++ + S +S+A++ PS P + G + +P A V+
Sbjct: 17 QPPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGG 76
Query: 157 NGAAGFLNRIKKNESVEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKE 216
G G SG GGG +G GGGGGG+N +NG G G
Sbjct: 77 GGGGG---------------SGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGG-- 119
Query: 217 RASRYNDGGGSGSGDKRNKNIESNSKRNVGRPPKKAAETVASTKRGRESSASGGKDKRP 275
+ GGG S N + S+S + ++ + +S+ SS+ G +P
Sbjct: 120 --GGISAGGGVASSTPINASTGSSSSSS-----SSSSSSSSSSSSSSSSSSCGPLPGKP 171
>SSRP_RAT (Q04931) Structure-specific recognition protein 1 (SSRP1)
(Recombination signal sequence recognition protein)
(T160) (Fragment)
Length = 561
Score = 47.8 bits (112), Expect = 3e-05
Identities = 54/222 (24%), Positives = 83/222 (37%), Gaps = 19/222 (8%)
Query: 68 DKKERPSSDVKPTLKPSYSETDEEEPPKAKEKPVTGARSRRSNKNLSSNASNKKPPSNST 127
D E S+ + + ++D EE + + K A+ R+S K S K P +
Sbjct: 342 DVAEEFDSNASASSSSNEGDSDREEKKRKQLKRAKMAKDRKSRKKSSEGKKGKDPNAPKR 401
Query: 128 PRTGSSANKPAETPKLKNKAEGVS----DKKKNNGAAGFLNRIK----------KNESVE 173
P + A K+K+ G+S KK G K + E E
Sbjct: 402 PMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKGEDARREYEE 461
Query: 174 VLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSG---SG 230
++ GG G SS K K +KK + +G K + + +D S S
Sbjct: 462 AMKEYEGGRGDSSKRDKSKKKKKVKAKLEKKSTPS-RGSSSKASSRQLSDSFKSKEFVSS 520
Query: 231 DKRNKNIESNSKRNVGRPPKKAAETVASTKRGRESSASGGKD 272
D+ + E+ SK+ R E +AST E SASG +
Sbjct: 521 DESSSG-ENKSKKKRRRSEDSDEEELASTPPSSEDSASGSDE 561
Score = 35.0 bits (79), Expect = 0.21
Identities = 53/248 (21%), Positives = 94/248 (37%), Gaps = 56/248 (22%)
Query: 85 YSETDEEEPPKAKEKPVTGARSRRSNKNLSSNASNKKPPSNSTP---------------R 129
Y+++DE++ E+ + R N N SS+ S ++ + P
Sbjct: 293 YADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETDESFNPGEEEEDVAEEFDSNAS 352
Query: 130 TGSSAN---------KPAETPKLKNKAEGVSDKKKNNGAAGFLNRIKK----------NE 170
SS+N K + + K + S KK + G G K N
Sbjct: 353 ASSSSNEGDSDREEKKRKQLKRAKMAKDRKSRKKSSEGKKGKDPNAPKRPMSAYMLWLNA 412
Query: 171 SVEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDG-----G 225
S E ++S G + S K G +KE+K+ + KG++ Y + G
Sbjct: 413 SREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWD----RKGEDARREYEEAMKEYEG 468
Query: 226 GSGSGDKRNKN---------IESNSKRNVGRPPKKAAETVASTKRGRE----SSASGGKD 272
G G KR+K+ +E S + G K ++ ++ + + +E +S G++
Sbjct: 469 GRGDSSKRDKSKKKKKVKAKLEKKSTPSRGSSSKASSRQLSDSFKSKEFVSSDESSSGEN 528
Query: 273 KRPKKRSK 280
K KKR +
Sbjct: 529 KSKKKRRR 536
>GAR2_SCHPO (P41891) Protein gar2
Length = 500
Score = 47.8 bits (112), Expect = 3e-05
Identities = 48/226 (21%), Positives = 100/226 (44%), Gaps = 17/226 (7%)
Query: 59 KGDHKPIINDKKERPSSDVKPTLKPSYSETDEEEPPKAKEKPVTGARSRRSNKNLSSNAS 118
K K ++ KK + + + +PS +++ K KE+ + + S S+ S++S
Sbjct: 42 KQSSKTDVSPKKSKKEAKRASSPEPSKKSVKKQKKSKKKEESSSESESESSSSESESSSS 101
Query: 119 NKKPPS----NSTPRTGSSANKPAETPKLKNKAEGVSDKKKNNGAAGFLNRIKKNESVEV 174
+ S +S+ + SS ++ K + K E S+ ++ + + K E E
Sbjct: 102 ESESSSSESESSSSESSSSESEEEVIVKTEEKKESSSESSSSSESEEEEEAVVKIE--EK 159
Query: 175 LRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSGDKRN 234
S S SS S + ++E+++VV K E+ KE +S + S D +
Sbjct: 160 KESSSDSSSESSSSESESESSSSESEEEEEVVE--KTEEKKEGSSE-SSSDSESSSDSSS 216
Query: 235 KNIESNSKRNVGRPPKKAAETVASTKRGRESSASGGKDKRPKKRSK 280
++ +S+S + +E+ +S++ ++ A ++RP K +K
Sbjct: 217 ESGDSDSSSD--------SESESSSEDEKKRKAEPASEERPAKITK 254
Score = 32.7 bits (73), Expect = 1.0
Identities = 38/171 (22%), Positives = 69/171 (40%), Gaps = 31/171 (18%)
Query: 45 SSIPVKPSTTTFSHKGDHKPIINDKKERPSSDVKPTLKPSYSETDEEEPPKAKEKPVTGA 104
SS S+ + S + + + I+ ++++ SS + S SE +EE K +EK
Sbjct: 107 SSESESSSSESSSSESEEEVIVKTEEKKESSSESSS--SSESEEEEEAVVKIEEK----- 159
Query: 105 RSRRSNKNLSSNASNKKPPSNSTPRTGSSANKPAE--TPKLKNKAEGVSDKKKNNGAAGF 162
K SS++S++ S S + SS ++ E K + K EG S+ ++ ++
Sbjct: 160 ------KESSSDSSSESSSSESESESSSSESEEEEEVVEKTEEKKEGSSESSSDSESS-- 211
Query: 163 LNRIKKNESVEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEK 213
S S G S SS ++ E+K+ E+
Sbjct: 212 --------------SDSSSESGDSDSSSDSESESSSEDEKKRKAEPASEER 248
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.299 0.122 0.330
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,773,452
Number of Sequences: 164201
Number of extensions: 1946348
Number of successful extensions: 29457
Number of sequences better than 10.0: 1353
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 853
Number of HSP's that attempted gapping in prelim test: 10999
Number of HSP's gapped (non-prelim): 6791
length of query: 281
length of database: 59,974,054
effective HSP length: 109
effective length of query: 172
effective length of database: 42,076,145
effective search space: 7237096940
effective search space used: 7237096940
T: 11
A: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.6 bits)
S2: 65 (29.6 bits)
Medicago: description of AC146756.6