BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146749.13 - phase: 0 /pseudo
         (68 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GPS2_HUMAN (Q13227) G protein pathway suppressor 2 (GPS2 protein)      30  1.2
TRPC_HELPY (O25867) Tryptophan biosynthesis protein trpCF [Inclu...    28  3.4
TRPC_HELPJ (Q9ZJU8) Tryptophan biosynthesis protein trpCF [Inclu...    27  7.5
GRPE_THETN (Q8RB69) GrpE protein (HSP-70 cofactor)                     27  9.8

>GPS2_HUMAN (Q13227) G protein pathway suppressor 2 (GPS2 protein)
          Length = 327

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 19/62 (30%), Positives = 31/62 (49%), Gaps = 2/62 (3%)

Query: 7  ERDFKGEASSDKSKSTLERTKEETGWPSFRQVVDLLKLSLEEFTSSILKFMSNLIALGEA 66
          ER+ K +   +  K   ++ KEE      +++ +  ++SLEE    ILK    L+AL E 
Sbjct: 25 ERERKRQEEEEVDKMMEQKMKEEQERRKKKEMEE--RMSLEETKEQILKLEEKLLALQEE 82

Query: 67 SH 68
           H
Sbjct: 83 KH 84


>TRPC_HELPY (O25867) Tryptophan biosynthesis protein trpCF
          [Includes: Indole-3-glycerol phosphate synthase (EC
          4.1.1.48) (IGPS); N-(5'-phospho-ribosyl)anthranilate
          isomerase (EC 5.3.1.24) (PRAI)]
          Length = 452

 Score = 28.5 bits (62), Expect = 3.4
 Identities = 21/62 (33%), Positives = 28/62 (44%), Gaps = 2/62 (3%)

Query: 5  PSERDFKGEASSDKSKSTLERTKEETGWPSFRQVVDLLKL--SLEEFTSSILKFMSNLIA 62
          PS+RDFK      K+   LE  K        R+  DLLK+  + E+F S I     +   
Sbjct: 31 PSDRDFKKALLEKKTSFILECKKASPSKGLIRKDFDLLKITKTYEKFASCISVLADSKYF 90

Query: 63 LG 64
          LG
Sbjct: 91 LG 92


>TRPC_HELPJ (Q9ZJU8) Tryptophan biosynthesis protein trpCF
          [Includes: Indole-3-glycerol phosphate synthase (EC
          4.1.1.48) (IGPS); N-(5'-phospho-ribosyl)anthranilate
          isomerase (EC 5.3.1.24) (PRAI)]
          Length = 452

 Score = 27.3 bits (59), Expect = 7.5
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 5/64 (7%)

Query: 5  PSERDFKGEASSDKSKSTLERTKEETGWPSFRQVVDLLKLSLEEFTSSILKFMSNLIALG 64
          PS+RDFK      K+   LE  K        R+  DLL     E T +  KF S +  L 
Sbjct: 31 PSDRDFKKALLEKKTSFILEYKKASPSKGLIRKDFDLL-----EITKTYEKFASCVSVLA 85

Query: 65 EASH 68
          ++ +
Sbjct: 86 DSKY 89


>GRPE_THETN (Q8RB69) GrpE protein (HSP-70 cofactor)
          Length = 204

 Score = 26.9 bits (58), Expect = 9.8
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 4/44 (9%)

Query: 5  PSERDFKGEASSDKSKSTLERTKEETGWPSFRQVVDLLKLSLEE 48
          PSE +   E   +K ++ +E+ KE    PS  ++V+ L+  LEE
Sbjct: 25 PSELEQSEEVVEEKIETEVEQKKE----PSLEEIVEELRKKLEE 64


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.310    0.126    0.333 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,388,476
Number of Sequences: 164201
Number of extensions: 179948
Number of successful extensions: 508
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 508
Number of HSP's gapped (non-prelim): 4
length of query: 68
length of database: 59,974,054
effective HSP length: 44
effective length of query: 24
effective length of database: 52,749,210
effective search space: 1265981040
effective search space used: 1265981040
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)