BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146743.5 + phase: 0 
         (377 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

SYT_BUCAI (P57225) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threon...    37  0.11
C4AA_DROME (Q9V7G5) Probable cytochrome P450 4aa1 (EC 1.14.-.-) ...    34  0.53
YL41_ARCFU (O28141) Hypothetical protein AF2141                        33  1.2
ALGH_PSEAE (Q9RQ16) UPF0301 protein algH                               32  2.6
YB26_METJA (Q58526) Hypothetical GTP-binding protein MJ1126            31  5.9
CUL1_SCHPO (O13790) Cullin 1 homolog (Cul-1) (Cell division cont...    31  5.9
YA62_METJA (Q58462) Hypothetical protein MJ1062                        30  7.7
NU5M_PETMA (Q35543) NADH-ubiquinone oxidoreductase chain 5 (EC 1...    30  7.7

>SYT_BUCAI (P57225) Threonyl-tRNA synthetase (EC 6.1.1.3)
           (Threonine--tRNA ligase) (ThrRS)
          Length = 642

 Score = 36.6 bits (83), Expect = 0.11
 Identities = 32/134 (23%), Positives = 55/134 (40%), Gaps = 16/134 (11%)

Query: 34  IIRSCYSEAIEQTSDDFVKIILTDACFIIEYFLRSLEWPQEDPLLS---KPWLRCDVKL- 89
           I    + E ++Q +   + II      ++ Y ++++ WP      S   +    CD+   
Sbjct: 51  IREDAFIEFVDQKNYKALNIIRYSCAQLLSYAIKNI-WPLAQIATSNIIEDGFYCDIDFK 109

Query: 90  ------DLILLENQLPWFVLEDLFNLTEPSCIDGEVSSFFDVAFHYFKVHFLQSILPNET 143
                 DLILLENQ+   V  + +N+        E    F   F  +KV    S++    
Sbjct: 110 RSISEKDLILLENQMKMLVKRE-YNILNKLISYSEAREIFQKCFEKYKV----SLIDENI 164

Query: 144 NNKNFTINYFHEHY 157
           N  +    Y+HE+Y
Sbjct: 165 NCNSKVSLYYHENY 178


>C4AA_DROME (Q9V7G5) Probable cytochrome P450 4aa1 (EC 1.14.-.-)
           (CYPIVAA1)
          Length = 514

 Score = 34.3 bits (77), Expect = 0.53
 Identities = 21/82 (25%), Positives = 37/82 (44%)

Query: 269 LLDFLIDTSQDVDKLVEKGIMINTLGDSNAVAKMINNLCLNVVQENINGGYISLCRKLNC 328
           LL+  IDT  D  + + + +    +G    +AK +NN  L+++ E + G  I    +   
Sbjct: 156 LLEKFIDTFVDASQSLYENLDAEAVGTEINIAKYVNNCVLDILNEAVLGVPIKKRGQDVA 215

Query: 329 FYEDPSHKYKAIFIHDYFSTPW 350
             ED   +   I +   F+ PW
Sbjct: 216 MMEDSPFRQGKIMMPARFTQPW 237


>YL41_ARCFU (O28141) Hypothetical protein AF2141
          Length = 228

 Score = 33.1 bits (74), Expect = 1.2
 Identities = 18/54 (33%), Positives = 32/54 (58%), Gaps = 9/54 (16%)

Query: 1   MEDLKLRYLKSFFLERTHKGLGDCIGYIKKSEEIIRSCYSEAI-EQTSDDFVKI 53
           +ED+++ Y+  FF+E   +G+GD    +++        Y  AI E+ ++DFVKI
Sbjct: 110 IEDMEVPYIVRFFIEDVERGIGDWKATVER--------YFRAIGEERAEDFVKI 155


>ALGH_PSEAE (Q9RQ16) UPF0301 protein algH
          Length = 189

 Score = 32.0 bits (71), Expect = 2.6
 Identities = 31/97 (31%), Positives = 39/97 (39%), Gaps = 3/97 (3%)

Query: 129 YFKVHFLQSILPNETNNKNFTINYFHEHYQQYIMKPDQVSMQLHNLTDLLRVFYLPPDML 188
           Y K HFL ++      N   T+ Y  EH +Q  M          NL ++L    L PD L
Sbjct: 8   YLKHHFLIAMPHMADPNFAQTVTYLVEHNEQGAMGLVINRPSGLNLAEVLE--QLKPDAL 65

Query: 189 PKREKQIVKHLFSASQLVEAGVKLH-VGQDYQSVLEL 224
           P    Q +          + G  LH  G  YQS LEL
Sbjct: 66  PPARCQHIDIYNGGPVQTDRGFVLHPSGLSYQSTLEL 102


>YB26_METJA (Q58526) Hypothetical GTP-binding protein MJ1126
          Length = 402

 Score = 30.8 bits (68), Expect = 5.9
 Identities = 36/140 (25%), Positives = 61/140 (42%), Gaps = 11/140 (7%)

Query: 23  DCIGYIKKSEEIIRSCYSEAIEQTSDDFVKIILTDACFIIEYFLRSLEWPQEDPLLSK-- 80
           D +G+I      +   +   IE+++D  + +I+ DA   IE   R L+   E  +LSK  
Sbjct: 233 DTVGFIDDLPPFMIEAFLSTIEESADSDLILIVVDASDDIEEIKRKLKVNHE--ILSKIN 290

Query: 81  ---PWLRCDVKLDLILLENQLPWFVLEDLFN-LTEPSCIDGEVSSFFDVAFHYFKVHFLQ 136
              P +    K+D I  E +    +LE+L   +  P  +  +     D+       H   
Sbjct: 291 CKAPIITVFNKVDKITKEKKRK--ILEELDRYIVNPIFVSAKYDINMDLLKEMIIEHLNL 348

Query: 137 SILPNETNNKNFTINYFHEH 156
           SI   ET+N    I+Y +E+
Sbjct: 349 SIGTIETDNPRL-ISYLYEN 367


>CUL1_SCHPO (O13790) Cullin 1 homolog (Cul-1) (Cell division control
           53 homolog)
          Length = 767

 Score = 30.8 bits (68), Expect = 5.9
 Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 13/139 (9%)

Query: 93  LLENQLPWFVLEDLFNLTEPSCIDGEVSSFFDVAFHYFKVHFLQSILPNETNNKNFTINY 152
           LL+N L  F  + L+  T+   ++  V S   ++F    +       PN ++ K F    
Sbjct: 174 LLQNLLYMFTKKRLYEPTDMKYVEVCVDSITSLSFDKTDM-----TKPNLSSYKTFFETN 228

Query: 153 FHEHYQQYIMKPDQVSMQLHNLTDLLRVFYLPPDMLPKREKQIVK---HLFSASQLVEAG 209
           F E+ + +  K     +  H++TD L+      ++    E+++V+   H  +   L+EA 
Sbjct: 229 FIENTKNFYAKESSEYLASHSITDYLK----KAEIRLAEEEELVRLYLHESTLKPLLEAT 284

Query: 210 VKLHVGQDYQSVLELKFAK 228
             + + Q ++ VL   FA+
Sbjct: 285 EDVLIAQ-HEEVLHNDFAR 302


>YA62_METJA (Q58462) Hypothetical protein MJ1062
          Length = 484

 Score = 30.4 bits (67), Expect = 7.7
 Identities = 24/83 (28%), Positives = 42/83 (49%), Gaps = 12/83 (14%)

Query: 272 FLIDTSQDVDKLVEK-GIMINTLGDSNAVAKMINNLCLNVV-------QENINGGYISLC 323
           F   + +DV K +E+ G  +    D+N + K I N+  +VV       +E+       LC
Sbjct: 38  FFTKSDEDVIKKIEENGFKVIKCSDNNDILKNIKNIKPDVVIIDDLGIEEDFAKNIRELC 97

Query: 324 RKLNCFYEDP---SHKYKAIFIH 343
           +KL  F+++P   S+KY  I ++
Sbjct: 98  KKL-IFFDNPNPSSNKYADIVVN 119


>NU5M_PETMA (Q35543) NADH-ubiquinone oxidoreductase chain 5 (EC
           1.6.5.3)
          Length = 598

 Score = 30.4 bits (67), Expect = 7.7
 Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 5/62 (8%)

Query: 196 VKHLFSASQLVEAGV----KLH-VGQDYQSVLELKFAKGALTIPRFEVCHWTETLLRNVV 250
           V  L  +S +V AGV    +LH + Q+Y  +LE+    GA+T     +C  T+  ++ ++
Sbjct: 243 VSALLHSSTMVVAGVFLLIRLHPLFQNYPLMLEMTLCLGAMTTICAALCATTQNDIKKII 302

Query: 251 AF 252
           AF
Sbjct: 303 AF 304


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.326    0.141    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,058,997
Number of Sequences: 164201
Number of extensions: 1774763
Number of successful extensions: 5378
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 5378
Number of HSP's gapped (non-prelim): 8
length of query: 377
length of database: 59,974,054
effective HSP length: 112
effective length of query: 265
effective length of database: 41,583,542
effective search space: 11019638630
effective search space used: 11019638630
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 67 (30.4 bits)