BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146722.4 - phase: 1
(88 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
LUG_ARATH (Q9FUY2) Transcriptional corepressor LEUNIG 144 5e-35
PKWA_THECU (P49695) Probable serine/threonine-protein kinase pkw... 60 7e-10
HET1_PODAN (Q00808) Vegetatible incompatibility protein HET-E-1 59 2e-09
YY46_ANASP (Q8YRI1) Hypothetical WD-repeat protein alr3466 59 2e-09
YS00_ANASP (Q8YTC2) Hypothetical WD-repeat protein alr2800 58 4e-09
YL24_ANASP (Q8YV57) Hypothetical WD-repeat protein all2124 57 8e-09
TA5L_HUMAN (O75529) TAF5-like RNA polymerase II p300/CBP-associa... 56 1e-08
TAF5_YEAST (P38129) Transcription initiation factor TFIID subuni... 55 3e-08
TA5L_MOUSE (Q91WQ5) TAF5-like RNA polymerase II p300/CBP-associa... 55 3e-08
Y143_SYNY3 (P74442) Hypothetical WD-repeat protein slr0143 54 5e-08
TUP1_KLULA (P56094) Transcriptional repressor TUP1 54 7e-08
TAF5_HUMAN (Q15542) Transcription initiation factor TFIID subuni... 54 7e-08
WSB1_FUGRU (Q9W5Z5) WD repeat and SOCS box containing protein 1 ... 53 1e-07
TIPD_DICDI (O15736) Protein tipD 53 1e-07
YH92_CAEEL (Q23256) Hypothetical WD-repeat protein ZC302.2 in ch... 53 2e-07
TAF5_MOUSE (Q8C092) Transcription initiation factor TFIID subuni... 53 2e-07
WDS_DROME (Q9V3J8) Will die slowly protein 52 2e-07
U3P2_HUMAN (O43818) U3 small nucleolar RNA interacting protein 2... 52 2e-07
RA1L_ARATH (Q38942) Hypothetical rae1-like protein At1g80670 52 3e-07
WSB1_MOUSE (O54927) WD repeat and SOCS box containing protein 1 ... 52 3e-07
>LUG_ARATH (Q9FUY2) Transcriptional corepressor LEUNIG
Length = 931
Score = 144 bits (362), Expect = 5e-35
Identities = 66/86 (76%), Positives = 75/86 (86%)
Query: 1 FTFSELNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITD 60
FTF+E+NSVRAST KV C HFSSDGK+LAS GHDKK VLWYTD++K K TLEEH+ +ITD
Sbjct: 639 FTFTEVNSVRASTTKVTCCHFSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITD 698
Query: 61 VRFSPSMPRLATSSYDKTVRVWDVDN 86
+RFSPS RLATSS+DKTVRVWD DN
Sbjct: 699 IRFSPSQLRLATSSFDKTVRVWDADN 724
Score = 28.9 bits (63), Expect = 2.4
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 50 TLEEHSLLITDVRFSPSMPRLATSSYDKTVRVW 82
TL H LIT + S + +A++S+DK V++W
Sbjct: 898 TLPAHEGLITSLAVSTATGLVASASHDKLVKLW 930
>PKWA_THECU (P49695) Probable serine/threonine-protein kinase pkwA
(EC 2.7.1.37)
Length = 742
Score = 60.5 bits (145), Expect = 7e-10
Identities = 31/80 (38%), Positives = 46/80 (56%)
Query: 5 ELNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFS 64
EL+++ T+ V FS DG LLASG D V LW + +++A E H+ + D+ FS
Sbjct: 493 ELHTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGHTHYVLDIAFS 552
Query: 65 PSMPRLATSSYDKTVRVWDV 84
P +A+ S D T R+W+V
Sbjct: 553 PDGSMVASGSRDGTARLWNV 572
Score = 56.2 bits (134), Expect = 1e-08
Identities = 29/79 (36%), Positives = 44/79 (54%)
Query: 6 LNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSP 65
L++ T+ V FS DG LLASG D+ + LW + ++ TLE H+ + V F P
Sbjct: 661 LHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQEEHTTLEGHTEPVHSVAFHP 720
Query: 66 SMPRLATSSYDKTVRVWDV 84
LA++S D T+R+W +
Sbjct: 721 EGTTLASASEDGTIRIWPI 739
Score = 55.1 bits (131), Expect = 3e-08
Identities = 35/82 (42%), Positives = 43/82 (51%), Gaps = 2/82 (2%)
Query: 5 ELNSVRASTN--KVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVR 62
ELN R T + V FS G LLA G DK + +W S + TLE H+ + V
Sbjct: 449 ELNEPRILTTDREAVAVAFSPGGSLLAGGSGDKLIHVWDVASGDELHTLEGHTDWVRAVA 508
Query: 63 FSPSMPRLATSSYDKTVRVWDV 84
FSP LA+ S D TVR+WDV
Sbjct: 509 FSPDGALLASGSDDATVRLWDV 530
Score = 51.6 bits (122), Expect = 3e-07
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 2 TFSELNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDV 61
T E + ++A VV FS DG +L G D V LW S + T E H+ + V
Sbjct: 616 TGKERDVLQAPAENVVSLAFSPDGSMLVHGS-DSTVHLWDVASGEALHTFEGHTDWVRAV 674
Query: 62 RFSPSMPRLATSSYDKTVRVWDV 84
FSP LA+ S D+T+R+WDV
Sbjct: 675 AFSPDGALLASGSDDRTIRLWDV 697
Score = 50.8 bits (120), Expect = 6e-07
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 13 TNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLAT 72
T+ V+ FS DG ++ASG D LW + + A L+ H+ + V FSP +A+
Sbjct: 543 THYVLDIAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVAS 602
Query: 73 SSYDKTVRVWDV 84
S D T+R+WDV
Sbjct: 603 GSRDGTIRLWDV 614
Score = 45.1 bits (105), Expect = 3e-05
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 2 TFSELNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDV 61
T +E ++ T+ V FS DG ++ASG D + LW + K++ L+ + + +
Sbjct: 574 TGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGKERDVLQAPAENVVSL 633
Query: 62 RFSPSMPRLATSSYDKTVRVWDV 84
FSP L S D TV +WDV
Sbjct: 634 AFSPDGSMLVHGS-DSTVHLWDV 655
>HET1_PODAN (Q00808) Vegetatible incompatibility protein HET-E-1
Length = 1356
Score = 59.3 bits (142), Expect = 2e-09
Identities = 29/70 (41%), Positives = 42/70 (59%)
Query: 14 NKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATS 73
+ V+ FS+DG+ +ASG DK + +W T S TLE H + V FSP R+A+
Sbjct: 842 SSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRERVASG 901
Query: 74 SYDKTVRVWD 83
S DKT+++WD
Sbjct: 902 SDDKTIKIWD 911
Score = 57.0 bits (136), Expect = 8e-09
Identities = 29/70 (41%), Positives = 41/70 (58%)
Query: 14 NKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATS 73
+ V+ FS DG+ +ASG DK + +W T S TLE H + V FSP R+A+
Sbjct: 968 SSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASG 1027
Query: 74 SYDKTVRVWD 83
S DKT+++WD
Sbjct: 1028 SDDKTIKIWD 1037
Score = 55.8 bits (133), Expect = 2e-08
Identities = 27/63 (42%), Positives = 37/63 (57%)
Query: 21 FSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVR 80
FS DG+ +ASG DK + +W T S TLE H + V FSP R+A+ S D T++
Sbjct: 1185 FSPDGQRVASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDNTIK 1244
Query: 81 VWD 83
+WD
Sbjct: 1245 IWD 1247
Score = 54.3 bits (129), Expect = 5e-08
Identities = 27/63 (42%), Positives = 37/63 (57%)
Query: 21 FSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVR 80
FS DG+ +ASG DK + +W T S TLE H + V FSP R+A+ S D T++
Sbjct: 1017 FSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIK 1076
Query: 81 VWD 83
+WD
Sbjct: 1077 IWD 1079
Score = 53.9 bits (128), Expect = 7e-08
Identities = 26/63 (41%), Positives = 36/63 (56%)
Query: 21 FSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVR 80
FS DG+ +ASG D + +W S TLE H + V FSP R+A+ S DKT++
Sbjct: 933 FSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIK 992
Query: 81 VWD 83
+WD
Sbjct: 993 IWD 995
Score = 52.4 bits (124), Expect = 2e-07
Identities = 26/63 (41%), Positives = 36/63 (56%)
Query: 21 FSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVR 80
FS DG+ +ASG D + +W S TLE H + V FSP R+A+ S DKT++
Sbjct: 1143 FSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDKTIK 1202
Query: 81 VWD 83
+WD
Sbjct: 1203 IWD 1205
Score = 50.4 bits (119), Expect = 8e-07
Identities = 25/63 (39%), Positives = 35/63 (54%)
Query: 21 FSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVR 80
FS DG+ +ASG D + +W S TLE H + V FSP R+A+ S D T++
Sbjct: 1059 FSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIK 1118
Query: 81 VWD 83
+WD
Sbjct: 1119 IWD 1121
Score = 50.1 bits (118), Expect = 1e-06
Identities = 25/63 (39%), Positives = 35/63 (54%)
Query: 21 FSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVR 80
FS D + +ASG DK + +W S TLE H + V FSP R+A+ S D T++
Sbjct: 891 FSPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIK 950
Query: 81 VWD 83
+WD
Sbjct: 951 IWD 953
Score = 49.7 bits (117), Expect = 1e-06
Identities = 25/63 (39%), Positives = 35/63 (54%)
Query: 21 FSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVR 80
FS DG+ +ASG D + +W S TLE H + V FSP R+A+ S D T++
Sbjct: 1101 FSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIK 1160
Query: 81 VWD 83
+WD
Sbjct: 1161 IWD 1163
Score = 35.0 bits (79), Expect = 0.034
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 50 TLEEHSLLITDVRFSPSMPRLATSSYDKTVRVWD 83
TLE H + V FS R+A+ S DKT+++WD
Sbjct: 836 TLEGHGSSVLSVAFSADGQRVASGSDDKTIKIWD 869
>YY46_ANASP (Q8YRI1) Hypothetical WD-repeat protein alr3466
Length = 1526
Score = 58.9 bits (141), Expect = 2e-09
Identities = 33/85 (38%), Positives = 48/85 (55%)
Query: 2 TFSELNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDV 61
T EL + + + V FS DGK+LASG D+ V LW S + T + H+ + V
Sbjct: 895 TGKELLTCKGHNSWVNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSV 954
Query: 62 RFSPSMPRLATSSYDKTVRVWDVDN 86
FSP+ LA+ S D+TVR+WD+ +
Sbjct: 955 VFSPNSLMLASGSSDQTVRLWDISS 979
Score = 58.5 bits (140), Expect = 3e-09
Identities = 31/81 (38%), Positives = 46/81 (56%)
Query: 6 LNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSP 65
L++ + TN V F+ DG +LASG D+ V LW S K T + H+ ++ V FSP
Sbjct: 1277 LHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSP 1336
Query: 66 SMPRLATSSYDKTVRVWDVDN 86
LA+ S D+TVR+W + +
Sbjct: 1337 DGTMLASGSDDQTVRLWSISS 1357
Score = 57.4 bits (137), Expect = 6e-09
Identities = 28/66 (42%), Positives = 39/66 (58%)
Query: 21 FSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVR 80
F+ DG LASG D+ V LW +S K T + H+ + V F+P LA+ S DKTVR
Sbjct: 1208 FNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVR 1267
Query: 81 VWDVDN 86
+WD+ +
Sbjct: 1268 LWDISS 1273
Score = 56.2 bits (134), Expect = 1e-08
Identities = 31/81 (38%), Positives = 46/81 (56%)
Query: 6 LNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSP 65
L +++ TN V FS DG LASG D+ V LW S K L+ H+ + V F+P
Sbjct: 1151 LYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNP 1210
Query: 66 SMPRLATSSYDKTVRVWDVDN 86
LA+ S D+TVR+W++++
Sbjct: 1211 DGSTLASGSSDQTVRLWEINS 1231
Score = 55.5 bits (132), Expect = 2e-08
Identities = 27/66 (40%), Positives = 39/66 (58%)
Query: 21 FSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVR 80
F+ DG +LASG DK V LW S K T + H+ + V F+P LA+ S D+TVR
Sbjct: 1250 FNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVR 1309
Query: 81 VWDVDN 86
+W++ +
Sbjct: 1310 LWEISS 1315
Score = 55.1 bits (131), Expect = 3e-08
Identities = 31/74 (41%), Positives = 43/74 (57%)
Query: 13 TNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLAT 72
TN V FS DG +LASG D+ V LW S K TL+ H+ + + FSP LA+
Sbjct: 1368 TNWVGSVIFSPDGAILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLLAS 1427
Query: 73 SSYDKTVRVWDVDN 86
S D+TVR+W++ +
Sbjct: 1428 GSDDQTVRLWNISS 1441
Score = 53.9 bits (128), Expect = 7e-08
Identities = 28/66 (42%), Positives = 38/66 (57%)
Query: 21 FSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVR 80
FSSDG +LASG D+ V LW S TL+ H+ + V FSP LA+ D+ VR
Sbjct: 1040 FSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVR 1099
Query: 81 VWDVDN 86
+WD+ +
Sbjct: 1100 LWDISS 1105
Score = 52.8 bits (125), Expect = 2e-07
Identities = 28/66 (42%), Positives = 39/66 (58%)
Query: 21 FSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVR 80
FS +G LA+G D+ V LW S K TL+ H+ + V FSP LA+ S D+TVR
Sbjct: 1124 FSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVR 1183
Query: 81 VWDVDN 86
+WD+ +
Sbjct: 1184 LWDISS 1189
Score = 50.8 bits (120), Expect = 6e-07
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 6 LNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSP 65
L++ + T+ V FS DG +LASG D+ V LW S + T H+ + V FSP
Sbjct: 1319 LHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSP 1378
Query: 66 SMPRLATSSYDKTVRVWDVDN 86
LA+ S D+TVR+W + +
Sbjct: 1379 DGAILASGSGDQTVRLWSISS 1399
Score = 50.8 bits (120), Expect = 6e-07
Identities = 30/81 (37%), Positives = 46/81 (56%)
Query: 6 LNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSP 65
L +++ T+ V FS DG +LASGG D+ V LW S TL+ ++ + + FSP
Sbjct: 1067 LYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSP 1126
Query: 66 SMPRLATSSYDKTVRVWDVDN 86
+ LA S D+ VR+WD+ +
Sbjct: 1127 NGVTLANGSSDQIVRLWDISS 1147
Score = 50.1 bits (118), Expect = 1e-06
Identities = 31/79 (39%), Positives = 42/79 (52%)
Query: 6 LNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSP 65
L +++ N V FS DG LLASG D+ V LW S + TL H + V FS
Sbjct: 1403 LYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRSVAFSS 1462
Query: 66 SMPRLATSSYDKTVRVWDV 84
LA+ S D+T+++WDV
Sbjct: 1463 DGLILASGSDDETIKLWDV 1481
Score = 48.9 bits (115), Expect = 2e-06
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 3 FSELNSVRASTNKVVCS----HFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLI 58
F+E N + K++ S FS DGKL A+G V W + K+ T + H+ +
Sbjct: 850 FTEANLAYSVFTKILGSVLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWV 909
Query: 59 TDVRFSPSMPRLATSSYDKTVRVWDVDN 86
V FS LA+ S D+TVR+WD+ +
Sbjct: 910 NSVGFSQDGKMLASGSDDQTVRLWDISS 937
Score = 47.0 bits (110), Expect = 9e-06
Identities = 24/66 (36%), Positives = 37/66 (55%)
Query: 21 FSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVR 80
F+ DG +LA+G D+ V LW S + + H+ + V FS LA+ S D+TVR
Sbjct: 998 FNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVR 1057
Query: 81 VWDVDN 86
+WD+ +
Sbjct: 1058 LWDISS 1063
Score = 46.6 bits (109), Expect = 1e-05
Identities = 27/81 (33%), Positives = 43/81 (52%)
Query: 6 LNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSP 65
L + + T++V FS + +LASG D+ V LW S + + H+ + V F+
Sbjct: 941 LKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNL 1000
Query: 66 SMPRLATSSYDKTVRVWDVDN 86
LAT S D+TVR+WD+ +
Sbjct: 1001 DGSMLATGSGDQTVRLWDISS 1021
>YS00_ANASP (Q8YTC2) Hypothetical WD-repeat protein alr2800
Length = 1258
Score = 58.2 bits (139), Expect = 4e-09
Identities = 31/79 (39%), Positives = 46/79 (57%)
Query: 6 LNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSP 65
L ++ TN V FS DGK+LAS HD+ V +W ++ K H+ L++ V FSP
Sbjct: 1139 LKTLTGHTNWVFDIAFSPDGKILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFSP 1198
Query: 66 SMPRLATSSYDKTVRVWDV 84
+A+ S D+TVR+W+V
Sbjct: 1199 DGEVVASGSQDQTVRIWNV 1217
Score = 57.4 bits (137), Expect = 6e-09
Identities = 28/77 (36%), Positives = 48/77 (61%)
Query: 9 VRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMP 68
+R +N+V + FS +G+++A+ D+ V +W K TL H+ + D+ FSP
Sbjct: 1100 LRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGK 1159
Query: 69 RLATSSYDKTVRVWDVD 85
LA++S+D+TVR+WDV+
Sbjct: 1160 ILASASHDQTVRIWDVN 1176
Score = 54.7 bits (130), Expect = 4e-08
Identities = 27/64 (42%), Positives = 41/64 (63%)
Query: 21 FSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVR 80
FS D ++LASG +DK V LW + K ++LE H+ I + FSP LA++S D +VR
Sbjct: 944 FSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVR 1003
Query: 81 VWDV 84
+W++
Sbjct: 1004 LWNI 1007
Score = 50.8 bits (120), Expect = 6e-07
Identities = 27/78 (34%), Positives = 40/78 (50%)
Query: 6 LNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSP 65
L ++ T+ V C FS DG LAS D + LW K TL+ H+ + V FS
Sbjct: 761 LQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSA 820
Query: 66 SMPRLATSSYDKTVRVWD 83
LA+ S D+T+++W+
Sbjct: 821 DGQTLASGSGDRTIKIWN 838
Score = 50.4 bits (119), Expect = 8e-07
Identities = 29/77 (37%), Positives = 41/77 (52%)
Query: 10 RASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPR 69
R +N V FS DG++LAS G D+ V LW TL H + V F P
Sbjct: 681 RGHSNWVRFVVFSPDGEILASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGET 740
Query: 70 LATSSYDKTVRVWDVDN 86
LA++S DKT+++WD+ +
Sbjct: 741 LASASGDKTIKLWDIQD 757
Score = 49.3 bits (116), Expect = 2e-06
Identities = 27/78 (34%), Positives = 44/78 (55%)
Query: 6 LNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSP 65
L ++ ++K++ +S DG+LLAS D+ V LW + + L HS + FSP
Sbjct: 1055 LKTLSEHSDKILGMAWSPDGQLLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSP 1114
Query: 66 SMPRLATSSYDKTVRVWD 83
+ +AT S D+TV++WD
Sbjct: 1115 NGEIIATCSTDQTVKIWD 1132
Score = 47.8 bits (112), Expect = 5e-06
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 13 TNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLAT 72
T+ V F GK++A+G D V LW + + TL EHS I + +SP LA+
Sbjct: 1020 TDWVYAVVFHPQGKIIATGSADCTVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQLLAS 1079
Query: 73 SSYDKTVRVWD 83
+S D++VR+WD
Sbjct: 1080 ASADQSVRLWD 1090
Score = 47.0 bits (110), Expect = 9e-06
Identities = 23/78 (29%), Positives = 43/78 (54%)
Query: 6 LNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSP 65
L ++++ T V FS+DG+ LASG D+ + +W + + T H+ + + +SP
Sbjct: 803 LRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSP 862
Query: 66 SMPRLATSSYDKTVRVWD 83
L + S D+T+++WD
Sbjct: 863 DSKILVSGSGDRTIKLWD 880
Score = 46.6 bits (109), Expect = 1e-05
Identities = 26/79 (32%), Positives = 40/79 (49%)
Query: 6 LNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSP 65
+ ++ ++V F DG+ LAS DK + LW TL H+ + V FSP
Sbjct: 719 IKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQTLTGHTDWVRCVAFSP 778
Query: 66 SMPRLATSSYDKTVRVWDV 84
LA+S+ D T+++WDV
Sbjct: 779 DGNTLASSAADHTIKLWDV 797
Score = 42.4 bits (98), Expect = 2e-04
Identities = 26/78 (33%), Positives = 39/78 (49%)
Query: 6 LNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSP 65
+ ++ TN+V FS DG+ LA D+ V LW + + ++ V FSP
Sbjct: 887 IKTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRLWNCRTGQCLKAWYGNTDWALPVAFSP 946
Query: 66 SMPRLATSSYDKTVRVWD 83
LA+ S DKTV++WD
Sbjct: 947 DRQILASGSNDKTVKLWD 964
Score = 41.6 bits (96), Expect = 4e-04
Identities = 25/79 (31%), Positives = 40/79 (49%)
Query: 6 LNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSP 65
++S+ T+ + FS D + LAS D V LW + + L EH+ + V F P
Sbjct: 971 ISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLEHTDWVYAVVFHP 1030
Query: 66 SMPRLATSSYDKTVRVWDV 84
+AT S D TV++W++
Sbjct: 1031 QGKIIATGSADCTVKLWNI 1049
Score = 38.1 bits (87), Expect = 0.004
Identities = 23/69 (33%), Positives = 35/69 (50%)
Query: 16 VVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSY 75
++ + FS +G+LLA+ D V +W S K HS + V FSP LA+
Sbjct: 645 ILSAAFSPEGQLLATCDTDCHVRVWEVKSGKLLLICRGHSNWVRFVVFSPDGEILASCGA 704
Query: 76 DKTVRVWDV 84
D+ V++W V
Sbjct: 705 DENVKLWSV 713
>YL24_ANASP (Q8YV57) Hypothetical WD-repeat protein all2124
Length = 1683
Score = 57.0 bits (136), Expect = 8e-09
Identities = 32/78 (41%), Positives = 44/78 (56%)
Query: 6 LNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSP 65
L ++ N+V +FS DGK LAS D V LW K K TL+ H+ + V FSP
Sbjct: 1439 LKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSP 1498
Query: 66 SMPRLATSSYDKTVRVWD 83
+A++S DKT+R+WD
Sbjct: 1499 DGKIIASASADKTIRLWD 1516
Score = 55.5 bits (132), Expect = 2e-08
Identities = 26/69 (37%), Positives = 39/69 (55%)
Query: 16 VVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSY 75
V+ FS DG+ +A+G DK V LW+ K TL H + + FSP LA++S
Sbjct: 1200 VITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASA 1259
Query: 76 DKTVRVWDV 84
DKT+++W +
Sbjct: 1260 DKTIKLWRI 1268
Score = 55.1 bits (131), Expect = 3e-08
Identities = 29/63 (46%), Positives = 36/63 (57%)
Query: 20 HFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTV 79
+FS DGK LAS D + LW T S + TL HS + VRFSP +A S DKTV
Sbjct: 1162 YFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTV 1221
Query: 80 RVW 82
++W
Sbjct: 1222 KLW 1224
Score = 55.1 bits (131), Expect = 3e-08
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 21 FSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVR 80
FS DG+ +ASGG DK + LW T T+ H + +V FSP LA++S D +++
Sbjct: 1121 FSPDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIK 1180
Query: 81 VWD 83
+WD
Sbjct: 1181 LWD 1183
Score = 54.7 bits (130), Expect = 4e-08
Identities = 28/75 (37%), Positives = 45/75 (59%)
Query: 8 SVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSM 67
+++ T++V FS DGK++AS DK + LW + S +L H+ L+ V F+P
Sbjct: 1483 TLKGHTDEVFWVSFSPDGKIIASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFNPDG 1542
Query: 68 PRLATSSYDKTVRVW 82
LA++S DKTV++W
Sbjct: 1543 SMLASTSADKTVKLW 1557
Score = 53.9 bits (128), Expect = 7e-08
Identities = 29/85 (34%), Positives = 46/85 (54%)
Query: 1 FTFSELNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITD 60
F+ + + S+ A + V +F+ DG +LAS DK V LW + T HS ++
Sbjct: 1518 FSGNLIKSLPAHNDLVYSVNFNPDGSMLASTSADKTVKLWRSHDGHLLHTFSGHSNVVYS 1577
Query: 61 VRFSPSMPRLATSSYDKTVRVWDVD 85
FSP +A++S DKTV++W +D
Sbjct: 1578 SSFSPDGRYIASASEDKTVKIWQID 1602
Score = 50.8 bits (120), Expect = 6e-07
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 1 FTFSELNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITD 60
F E N + + V+ S DG+ +ASG DK + LW D + TL H +
Sbjct: 1060 FEMQERNRLEGHKDGVISISISRDGQTIASGSLDKTIKLWSRDG-RLFRTLNGHEDAVYS 1118
Query: 61 VRFSPSMPRLATSSYDKTVRVWDVDN 86
V FSP +A+ DKT+++W +
Sbjct: 1119 VSFSPDGQTIASGGSDKTIKLWQTSD 1144
Score = 50.1 bits (118), Expect = 1e-06
Identities = 27/81 (33%), Positives = 39/81 (47%), Gaps = 1/81 (1%)
Query: 6 LNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSP 65
L++ +N V S FS DG+ +AS DK V +W D TL +H + FSP
Sbjct: 1565 LHTFSGHSNVVYSSSFSPDGRYIASASEDKTVKIWQIDG-HLLTTLPQHQAGVMSAIFSP 1623
Query: 66 SMPRLATSSYDKTVRVWDVDN 86
L + S D T ++W D+
Sbjct: 1624 DGKTLISGSLDTTTKIWRFDS 1644
Score = 49.7 bits (117), Expect = 1e-06
Identities = 25/63 (39%), Positives = 36/63 (56%)
Query: 21 FSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVR 80
FS DGK LAS DK + LW K TL+ H+ + DV FS +A++S D T++
Sbjct: 1247 FSPDGKTLASASADKTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDGKAIASASRDNTIK 1306
Query: 81 VWD 83
+W+
Sbjct: 1307 LWN 1309
Score = 47.8 bits (112), Expect = 5e-06
Identities = 25/66 (37%), Positives = 35/66 (52%)
Query: 21 FSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVR 80
F+ G L+AS DK V +W K TL H + V FSP LA++S D TV+
Sbjct: 1412 FTPQGDLIASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVK 1471
Query: 81 VWDVDN 86
+W+V +
Sbjct: 1472 LWNVSD 1477
Score = 45.1 bits (105), Expect = 3e-05
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 6 LNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSP 65
+ +++ + V +FSSDGK +AS D + LW ++ + T HS + V F P
Sbjct: 1274 VKTLKGHNDSVWDVNFSSDGKAIASASRDNTIKLWNRHGIELE-TFTGHSGGVYAVNFLP 1332
Query: 66 SMPRLATSSYDKTVRVW 82
+A++S D T+R+W
Sbjct: 1333 DSNIIASASLDNTIRLW 1349
Score = 42.0 bits (97), Expect = 3e-04
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 9 VRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMP 68
V A + V F DG ++A+ G D + LW++ TL + I + F+P
Sbjct: 1359 VLAGNSGVYAVSFLHDGSIIATAGADGNIQLWHSQDGSLLKTLPGNK-AIYGISFTPQGD 1417
Query: 69 RLATSSYDKTVRVWDV 84
+A+++ DKTV++W V
Sbjct: 1418 LIASANADKTVKIWRV 1433
Score = 28.5 bits (62), Expect = 3.1
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 16 VVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKAT 50
V+ + FS DGK L SG D +W DS + K +
Sbjct: 1616 VMSAIFSPDGKTLISGSLDTTTKIWRFDSQQAKTS 1650
>TA5L_HUMAN (O75529) TAF5-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 5L (PCAF
associated factor 65 beta) (PAF65-beta)
Length = 589
Score = 56.2 bits (134), Expect = 1e-08
Identities = 34/83 (40%), Positives = 46/83 (54%), Gaps = 3/83 (3%)
Query: 7 NSVRASTNK---VVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRF 63
NSVR T V+ FS +GK LAS G D+++ LW S L H+ IT + F
Sbjct: 459 NSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTF 518
Query: 64 SPSMPRLATSSYDKTVRVWDVDN 86
SP +A++S D +VRVWD+ N
Sbjct: 519 SPDSGLIASASMDNSVRVWDIRN 541
Score = 41.6 bits (96), Expect = 4e-04
Identities = 22/54 (40%), Positives = 27/54 (49%)
Query: 29 ASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVRVW 82
ASG HD+ LW D H + V+F P+ LAT S DKTVR+W
Sbjct: 400 ASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLW 453
Score = 40.4 bits (93), Expect = 8e-04
Identities = 21/82 (25%), Positives = 35/82 (42%)
Query: 4 SELNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRF 63
+E+ +R V + F +D L S D + W S + H+ + D+
Sbjct: 333 TEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDI 392
Query: 64 SPSMPRLATSSYDKTVRVWDVD 85
SP A+ S+D+T R+W D
Sbjct: 393 SPYSLYFASGSHDRTARLWSFD 414
Score = 38.1 bits (87), Expect = 0.004
Identities = 20/69 (28%), Positives = 32/69 (45%)
Query: 16 VVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSY 75
V C F + LA+G DK V LW H + + FSP+ LA++
Sbjct: 429 VDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGE 488
Query: 76 DKTVRVWDV 84
D+ +++WD+
Sbjct: 489 DQRLKLWDL 497
>TAF5_YEAST (P38129) Transcription initiation factor TFIID subunit 5
(TBP-associated factor 5) (TBP-associated factor 90 kDa)
(TAFII-90)
Length = 798
Score = 55.1 bits (131), Expect = 3e-08
Identities = 28/72 (38%), Positives = 40/72 (54%)
Query: 16 VVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSY 75
V + FS D K L SG DK V LW D+ + + H+ + DV FSP AT+S+
Sbjct: 528 VYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASH 587
Query: 76 DKTVRVWDVDNV 87
D+T R+W D++
Sbjct: 588 DQTARLWSCDHI 599
Score = 41.6 bits (96), Expect = 4e-04
Identities = 28/92 (30%), Positives = 39/92 (41%), Gaps = 18/92 (19%)
Query: 12 STNK-VVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQK-----------------ATLEE 53
+TNK + C FS D ++ A+G D + +W D TL
Sbjct: 464 NTNKDMSCLDFSDDCRIAAAGFQDSYIKIWSLDGSSLNNPNIALNNNDKDEDPTCKTLVG 523
Query: 54 HSLLITDVRFSPSMPRLATSSYDKTVRVWDVD 85
HS + FSP L + S DKTVR+W +D
Sbjct: 524 HSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMD 555
Score = 40.0 bits (92), Expect = 0.001
Identities = 26/83 (31%), Positives = 36/83 (43%)
Query: 2 TFSELNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDV 61
T + L S + + V FS G A+ HD+ LW D + H + V
Sbjct: 556 THTALVSYKGHNHPVWDVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCV 615
Query: 62 RFSPSMPRLATSSYDKTVRVWDV 84
F P+ + T S DKT R+WDV
Sbjct: 616 SFHPNGCYVFTGSSDKTCRMWDV 638
Score = 30.8 bits (68), Expect = 0.63
Identities = 20/73 (27%), Positives = 33/73 (44%), Gaps = 1/73 (1%)
Query: 13 TNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSL-LITDVRFSPSMPRLA 71
T V+ DG+ L++G D + +W + K+ + H I + +S L
Sbjct: 651 TAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLI 710
Query: 72 TSSYDKTVRVWDV 84
+ D TVRVWD+
Sbjct: 711 SGGADHTVRVWDL 723
>TA5L_MOUSE (Q91WQ5) TAF5-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 5L (PCAF
associated factor 65 beta) (PAF65-beta)
Length = 589
Score = 55.1 bits (131), Expect = 3e-08
Identities = 33/81 (40%), Positives = 45/81 (54%), Gaps = 3/81 (3%)
Query: 7 NSVRASTNK---VVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRF 63
NSVR T V+ FS +GK LAS G D+++ LW S L H+ IT + F
Sbjct: 459 NSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAF 518
Query: 64 SPSMPRLATSSYDKTVRVWDV 84
SP +A++S D +VRVWD+
Sbjct: 519 SPDSGLIASASMDNSVRVWDI 539
Score = 42.4 bits (98), Expect = 2e-04
Identities = 23/84 (27%), Positives = 36/84 (42%)
Query: 2 TFSELNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDV 61
T +E+ +R V + F +D L S D + W S + H+ + DV
Sbjct: 331 TGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDV 390
Query: 62 RFSPSMPRLATSSYDKTVRVWDVD 85
SP A+ S+D+T R+W D
Sbjct: 391 DISPFSLYFASGSHDRTARLWSFD 414
Score = 41.6 bits (96), Expect = 4e-04
Identities = 22/54 (40%), Positives = 27/54 (49%)
Query: 29 ASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVRVW 82
ASG HD+ LW D H + V+F P+ LAT S DKTVR+W
Sbjct: 400 ASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLW 453
Score = 38.1 bits (87), Expect = 0.004
Identities = 20/69 (28%), Positives = 32/69 (45%)
Query: 16 VVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSY 75
V C F + LA+G DK V LW H + + FSP+ LA++
Sbjct: 429 VDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGE 488
Query: 76 DKTVRVWDV 84
D+ +++WD+
Sbjct: 489 DQRLKLWDL 497
Score = 28.1 bits (61), Expect = 4.1
Identities = 26/98 (26%), Positives = 36/98 (36%), Gaps = 32/98 (32%)
Query: 19 SHFSSDGKLLASGGHDKKVVLWYTDSLKQKA---------------TLEE---------- 53
+ SSD KLLA+G + + LW S K K+ TLEE
Sbjct: 274 AEISSDSKLLAAGFDNSCIKLWSLRSKKLKSEPHHVDTSRIRLACDTLEEEENEEDNTGT 333
Query: 54 -------HSLLITDVRFSPSMPRLATSSYDKTVRVWDV 84
H + RF L + S D ++R WD+
Sbjct: 334 EMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL 371
>Y143_SYNY3 (P74442) Hypothetical WD-repeat protein slr0143
Length = 1191
Score = 54.3 bits (129), Expect = 5e-08
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 6 LNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSP 65
L +++ + V FS DG++LAS D+ V LW+ S K A L H+ + D +FSP
Sbjct: 635 LQTLKGHQDSVYSVSFSPDGEILASTSRDRTVRLWHWRSGKTLAVLGGHTKSVDDAQFSP 694
Query: 66 SMPRLATSSYDKTVRVWDVD 85
L + D +R+WD+D
Sbjct: 695 DGQTLVSVCRDGQIRLWDLD 714
Score = 39.7 bits (91), Expect = 0.001
Identities = 27/82 (32%), Positives = 39/82 (46%), Gaps = 1/82 (1%)
Query: 4 SELNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRF 63
+E N + + V SS L+AS D V LW T + H+ I V F
Sbjct: 551 AEKNVLTGHRDGVTSVAISSHKNLIASASRDGTVHLW-TPQGEFLREFTGHTGSIYRVDF 609
Query: 64 SPSMPRLATSSYDKTVRVWDVD 85
SP+ AT+ D+TV++WD+D
Sbjct: 610 SPNGKIFATAGQDQTVKIWDLD 631
Score = 38.1 bits (87), Expect = 0.004
Identities = 22/78 (28%), Positives = 39/78 (49%), Gaps = 1/78 (1%)
Query: 6 LNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSP 65
+ S+ A +++ +S +GK L S G + +W + + TL+ L I + SP
Sbjct: 1031 IRSIVAHGDRLNQLQYSPNGKYLLSAGREGTAKIWSVEG-QLLHTLKSDPLPIDQIAISP 1089
Query: 66 SMPRLATSSYDKTVRVWD 83
+AT++ D VR+WD
Sbjct: 1090 DSQWIATAASDGMVRLWD 1107
Score = 34.7 bits (78), Expect = 0.044
Identities = 23/59 (38%), Positives = 31/59 (51%), Gaps = 1/59 (1%)
Query: 24 DGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVRVW 82
+G LLA D V LW T + KATL H +T V F+P +L +SS + +V W
Sbjct: 736 NGNLLAVAADDGTVRLW-TPQGEIKATLSGHDEFVTRVVFTPDGKQLFSSSSNGSVIHW 793
Score = 27.3 bits (59), Expect = 7.0
Identities = 13/58 (22%), Positives = 29/58 (49%), Gaps = 1/58 (1%)
Query: 28 LASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVRVWDVD 85
LA+G + LW D ++ + H + +++SP+ L ++ + T ++W V+
Sbjct: 1012 LAAGDEQGNLTLWNFDGTLIRSIVA-HGDRLNQLQYSPNGKYLLSAGREGTAKIWSVE 1068
Score = 26.9 bits (58), Expect = 9.2
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 21 FSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVR 80
F+ DGK L S + V+ W T S K + + I + + + LA + + V+
Sbjct: 774 FTPDGKQLFSSSSNGSVIHWST-SGKMLKKYQGYPEAIFGLALASNGALLAIGAENNLVK 832
Query: 81 VWDV 84
VWD+
Sbjct: 833 VWDM 836
>TUP1_KLULA (P56094) Transcriptional repressor TUP1
Length = 682
Score = 53.9 bits (128), Expect = 7e-08
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 21 FSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVR 80
FS DGK LA+G DK + +W ++ K TL+ H I + + PS +L + S D+TVR
Sbjct: 414 FSPDGKFLATGAEDKLIRIWDLETKKIVMTLKGHEQDIYSLDYFPSGNKLVSGSGDRTVR 473
Query: 81 VWDV 84
+WD+
Sbjct: 474 IWDL 477
Score = 33.1 bits (74), Expect = 0.13
Identities = 16/44 (36%), Positives = 23/44 (51%)
Query: 42 TDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVRVWDVD 85
T + A+ L I V FSP LAT + DK +R+WD++
Sbjct: 393 TGNQNSAASTASSDLYIRSVCFSPDGKFLATGAEDKLIRIWDLE 436
Score = 30.8 bits (68), Expect = 0.63
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 24 DGKLLASGGHDKKVVLWYTDS--LKQKATLEE-----HSLLITDVRFSPSMPRLATSSYD 76
+GK +A+G D+ V +W +D+ L ++ E H + V F+ + + S D
Sbjct: 501 EGKFIAAGSLDRTVRVWDSDTGFLVERLDSENELGTGHRDSVYSVVFTRDGKGVVSGSLD 560
Query: 77 KTVRVWDVDNVS 88
++V++W+++ +S
Sbjct: 561 RSVKLWNLNGLS 572
Score = 30.4 bits (67), Expect = 0.83
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 21 FSSDGKLLASGGHDKKVVLWYTDSLK-QKA------TLEEHSLLITDVRFSPSMPRLATS 73
F+ DGK + SG D+ V LW + L QK+ T H + V + + + +
Sbjct: 547 FTRDGKGVVSGSLDRSVKLWNLNGLSGQKSHAECEVTYTGHKDFVLSVATTQNDEYILSG 606
Query: 74 SYDKTVRVWD 83
S D+ V WD
Sbjct: 607 SKDRGVLFWD 616
>TAF5_HUMAN (Q15542) Transcription initiation factor TFIID subunit 5
(Transcription initiation factor TFIID 100 kDa subunit)
(TAF(II)100) (TAFII-100) (TAFII100)
Length = 800
Score = 53.9 bits (128), Expect = 7e-08
Identities = 31/85 (36%), Positives = 41/85 (47%)
Query: 2 TFSELNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDV 61
TF+ L + V + FS G SGGHD+ LW TD + H +
Sbjct: 574 TFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCT 633
Query: 62 RFSPSMPRLATSSYDKTVRVWDVDN 86
RF P+ +AT S D+TVR+WDV N
Sbjct: 634 RFHPNSNYVATGSADRTVRLWDVLN 658
Score = 46.2 bits (108), Expect = 1e-05
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 21 FSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVR 80
FS +G+ LA+G D +V+LW L+ H+ + +RFS LA+ S D TVR
Sbjct: 677 FSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVR 736
Query: 81 VWD 83
+WD
Sbjct: 737 LWD 739
Score = 39.7 bits (91), Expect = 0.001
Identities = 23/85 (27%), Positives = 36/85 (42%)
Query: 2 TFSELNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDV 61
T SEL + + V + FS D L S D V LW + + H+ + D
Sbjct: 532 TASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDT 591
Query: 62 RFSPSMPRLATSSYDKTVRVWDVDN 86
+FSP + +D+ R+W D+
Sbjct: 592 QFSPYGYYFVSGGHDRVARLWATDH 616
Score = 35.0 bits (79), Expect = 0.034
Identities = 21/69 (30%), Positives = 32/69 (45%)
Query: 16 VVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSY 75
V C+ F + +A+G D+ V LW + H I + FSP+ LAT +
Sbjct: 630 VNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGAT 689
Query: 76 DKTVRVWDV 84
D V +WD+
Sbjct: 690 DGRVLLWDI 698
Score = 32.7 bits (73), Expect = 0.17
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 6 LNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLE 52
+ ++ T+ V FS DG++LASG D V LW D++K LE
Sbjct: 704 VGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW--DAIKAFEDLE 748
>WSB1_FUGRU (Q9W5Z5) WD repeat and SOCS box containing protein 1
(WSB-1)
Length = 427
Score = 53.1 bits (126), Expect = 1e-07
Identities = 30/70 (42%), Positives = 35/70 (49%)
Query: 14 NKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATS 73
N+V S FS D +L S G K V+LW D LE H + FSP LAT+
Sbjct: 220 NRVYSSAFSPDSSVLCSVGASKAVLLWNMDKYTLIRKLEGHHNDVVSCEFSPDGALLATA 279
Query: 74 SYDKTVRVWD 83
SYD V VWD
Sbjct: 280 SYDTRVIVWD 289
Score = 38.1 bits (87), Expect = 0.004
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 21 FSSDGKLLASGGHDKKVVLW--YTDSLKQKATLEEHSLLITDVRFSP-SMPRLATSSYDK 77
F D LLA+G ++ ++ +W YT +L L +H+ ++ D+ F+P L ++S DK
Sbjct: 141 FGRDQLLLATGLNNGRIKIWDVYTGTL--LLNLMDHTDIVRDLTFAPDGSLMLVSASTDK 198
Query: 78 TVRVWDV 84
+RVWD+
Sbjct: 199 KLRVWDL 205
Score = 36.6 bits (83), Expect = 0.012
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 17/98 (17%)
Query: 3 FSELNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLL----- 57
++ + + N VV FS DG LLA+ +D +V++W D + LE L
Sbjct: 251 YTLIRKLEGHHNDVVSCEFSPDGALLATASYDTRVIVW--DHQRGSILLELGHLFPPPSP 308
Query: 58 ----------ITDVRFSPSMPRLATSSYDKTVRVWDVD 85
+ V F +A+ S D+ VR W ++
Sbjct: 309 IFAGGANDRWVRSVSFCADGRHIASVSDDRLVRFWSIE 346
>TIPD_DICDI (O15736) Protein tipD
Length = 612
Score = 53.1 bits (126), Expect = 1e-07
Identities = 28/72 (38%), Positives = 43/72 (58%)
Query: 14 NKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATS 73
+++ C F+S G LLA+GG DK V +W S +QK+TL S I V FSP+ + +
Sbjct: 325 SEIYCMAFNSIGNLLATGGGDKCVKVWDVISGQQKSTLLGASQSIVSVSFSPNDESILGT 384
Query: 74 SYDKTVRVWDVD 85
S D + R+W+ +
Sbjct: 385 SNDNSARLWNTE 396
>YH92_CAEEL (Q23256) Hypothetical WD-repeat protein ZC302.2 in
chromosome V
Length = 501
Score = 52.8 bits (125), Expect = 2e-07
Identities = 28/78 (35%), Positives = 41/78 (51%)
Query: 6 LNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSP 65
L ++R TN V C F+ L+AS G D+ V +W + + HS IT + ++
Sbjct: 290 LRTMRGHTNYVFCCSFNPQSSLIASAGFDETVRVWDFKTGLCVKCIPAHSDPITSISYNH 349
Query: 66 SMPRLATSSYDKTVRVWD 83
+ATSSYD +RVWD
Sbjct: 350 DGNTMATSSYDGCIRVWD 367
Score = 51.6 bits (122), Expect = 3e-07
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 3 FSELNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVR 62
FS + ++ T V FS GK L +G DK++ +W T + TL H L I D
Sbjct: 203 FSLVKTISGHTKSVSVIKFSYCGKYLGTGSADKQIKVWNTVDMTYLQTLASHQLGINDFS 262
Query: 63 FSPSMPRLATSSYDKTVRVWDV 84
+S + +A++S D TV+++DV
Sbjct: 263 WSSNSQFIASASDDTTVKIFDV 284
Score = 32.0 bits (71), Expect = 0.28
Identities = 18/76 (23%), Positives = 38/76 (49%), Gaps = 1/76 (1%)
Query: 9 VRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATL-EEHSLLITDVRFSPSM 67
+ A ++ + ++ DG +A+ +D + +W S TL + +T V FSP+
Sbjct: 335 IPAHSDPITSISYNHDGNTMATSSYDGCIRVWDAASGSCLKTLVDTDHAPVTFVCFSPNG 394
Query: 68 PRLATSSYDKTVRVWD 83
L ++ D ++++WD
Sbjct: 395 KYLLSAQLDSSLKLWD 410
Score = 29.3 bits (64), Expect = 1.8
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 25 GKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSY--DKTVRVW 82
GK + SG D ++++W + + LE H+ + P++ +A+ D +R+W
Sbjct: 439 GKHIISGSEDGRILVWSIQTKQIVQILEGHTTPVLATDSHPTLNIIASGGLEPDNVIRIW 498
>TAF5_MOUSE (Q8C092) Transcription initiation factor TFIID subunit 5
(Transcription initiation factor TFIID 100 kDa subunit)
(TAF(II)100) (TAFII-100) (TAFII100)
Length = 801
Score = 52.8 bits (125), Expect = 2e-07
Identities = 30/85 (35%), Positives = 41/85 (47%)
Query: 2 TFSELNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDV 61
TF+ L + V + FS G SGGHD+ LW TD + H +
Sbjct: 575 TFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCT 634
Query: 62 RFSPSMPRLATSSYDKTVRVWDVDN 86
R+ P+ +AT S D+TVR+WDV N
Sbjct: 635 RYHPNSNYVATGSADRTVRLWDVLN 659
Score = 46.2 bits (108), Expect = 1e-05
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 21 FSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVR 80
FS +G+ LA+G D +V+LW L+ H+ + +RFS LA+ S D TVR
Sbjct: 678 FSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVR 737
Query: 81 VWD 83
+WD
Sbjct: 738 LWD 740
Score = 39.7 bits (91), Expect = 0.001
Identities = 23/85 (27%), Positives = 36/85 (42%)
Query: 2 TFSELNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDV 61
T SEL + + V + FS D L S D V LW + + H+ + D
Sbjct: 533 TASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDT 592
Query: 62 RFSPSMPRLATSSYDKTVRVWDVDN 86
+FSP + +D+ R+W D+
Sbjct: 593 QFSPYGYYFVSGGHDRVARLWATDH 617
Score = 33.9 bits (76), Expect = 0.075
Identities = 20/69 (28%), Positives = 32/69 (45%)
Query: 16 VVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSY 75
V C+ + + +A+G D+ V LW + H I + FSP+ LAT +
Sbjct: 631 VNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGAT 690
Query: 76 DKTVRVWDV 84
D V +WD+
Sbjct: 691 DGRVLLWDI 699
Score = 32.3 bits (72), Expect = 0.22
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 6 LNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLE 52
+ ++ T+ V FS DG++LASG D V LW D++K LE
Sbjct: 705 VGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW--DAVKAFEDLE 749
>WDS_DROME (Q9V3J8) Will die slowly protein
Length = 361
Score = 52.4 bits (124), Expect = 2e-07
Identities = 24/64 (37%), Positives = 38/64 (58%)
Query: 21 FSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVR 80
+SSD +LL SG DK + +W + K TL+ HS + F+P + + S+D++VR
Sbjct: 122 WSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 181
Query: 81 VWDV 84
+WDV
Sbjct: 182 IWDV 185
Score = 51.2 bits (121), Expect = 5e-07
Identities = 26/82 (31%), Positives = 42/82 (50%)
Query: 2 TFSELNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDV 61
T L +++ +N V C +F+ L+ SG D+ V +W + K TL HS ++ V
Sbjct: 145 TGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAV 204
Query: 62 RFSPSMPRLATSSYDKTVRVWD 83
F+ + +SSYD R+WD
Sbjct: 205 HFNRDGSLIVSSSYDGLCRIWD 226
Score = 47.8 bits (112), Expect = 5e-06
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 13 TNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLAT 72
T V FS +G+ LAS DK + +W K + T+ H L I+DV +S L +
Sbjct: 72 TKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVS 131
Query: 73 SSYDKTVRVWDV 84
S DKT++VW++
Sbjct: 132 GSDDKTLKVWEL 143
Score = 43.5 bits (101), Expect = 9e-05
Identities = 22/79 (27%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 6 LNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLK-QKATLEEHSLLITDVRFS 64
L ++ A ++ V HF+ DG L+ S +D +W T S + K +++ + ++ V+FS
Sbjct: 191 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 250
Query: 65 PSMPRLATSSYDKTVRVWD 83
P+ + ++ D T+++WD
Sbjct: 251 PNGKYILAATLDNTLKLWD 269
Score = 34.7 bits (78), Expect = 0.044
Identities = 15/35 (42%), Positives = 24/35 (67%)
Query: 48 KATLEEHSLLITDVRFSPSMPRLATSSYDKTVRVW 82
K TL H+ ++ V+FSP+ LA+SS DK +++W
Sbjct: 65 KFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIW 99
>U3P2_HUMAN (O43818) U3 small nucleolar RNA interacting protein 2
(U3 small nucleolar ribonucleoproptein-associated 55-kDa
protein) (U3 snoRNP-associated 55-kDa protein) (U3-55K)
Length = 475
Score = 52.4 bits (124), Expect = 2e-07
Identities = 24/72 (33%), Positives = 42/72 (58%)
Query: 13 TNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLAT 72
++ V+C SSDGK LASG K +++W S + T H ++ + F +L +
Sbjct: 199 SSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAFRRGTHQLYS 258
Query: 73 SSYDKTVRVWDV 84
+S+D++V+VW+V
Sbjct: 259 TSHDRSVKVWNV 270
>RA1L_ARATH (Q38942) Hypothetical rae1-like protein At1g80670
Length = 251
Score = 52.0 bits (123), Expect = 3e-07
Identities = 27/68 (39%), Positives = 38/68 (55%)
Query: 16 VVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSY 75
V+CS + DG + SGG DK+ +W S Q T+ H I + + P M LAT S+
Sbjct: 75 VLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSW 134
Query: 76 DKTVRVWD 83
DKT++ WD
Sbjct: 135 DKTLKYWD 142
>WSB1_MOUSE (O54927) WD repeat and SOCS box containing protein 1
(WSB-1)
Length = 421
Score = 51.6 bits (122), Expect = 3e-07
Identities = 32/78 (41%), Positives = 36/78 (46%)
Query: 9 VRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMP 68
+RA N V FS D +L S G K V LW D LE H + FSP
Sbjct: 210 LRAHQNWVYSCAFSPDCSMLCSVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPDGA 269
Query: 69 RLATSSYDKTVRVWDVDN 86
LAT+SYD V VWD N
Sbjct: 270 LLATASYDTRVYVWDPHN 287
Score = 41.6 bits (96), Expect = 4e-04
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 21 FSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATS-SYDKTV 79
F D LLA+G ++ ++ +W + K L +H ++ D+ F+P L S S DKT+
Sbjct: 136 FGQDQLLLATGLNNGRIKIWDVYTGKLLLNLVDHIEMVRDLTFAPDGSLLLVSASRDKTL 195
Query: 80 RVWDV 84
RVWD+
Sbjct: 196 RVWDL 200
Score = 32.7 bits (73), Expect = 0.17
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 17 VCSHFSSDGKLLASGGHDKKVVLWYT 42
+C FS+DG +LA+G HD V W T
Sbjct: 355 LCCAFSTDGSVLAAGTHDGSVYFWAT 380
Score = 32.0 bits (71), Expect = 0.28
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 13/96 (13%)
Query: 3 FSELNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLW---YTDSLKQKATL-------- 51
++ + + + VV FS DG LLA+ +D +V +W D L + L
Sbjct: 246 YTMIRKLEGHHHDVVACDFSPDGALLATASYDTRVYVWDPHNGDLLMEFGHLFPSPTPIF 305
Query: 52 --EEHSLLITDVRFSPSMPRLATSSYDKTVRVWDVD 85
+ + V FS +A+ + DK VR W +D
Sbjct: 306 AGGANDRWVRAVSFSHDGLHVASLADDKMVRFWRID 341
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.315 0.128 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,520,914
Number of Sequences: 164201
Number of extensions: 300527
Number of successful extensions: 2689
Number of sequences better than 10.0: 424
Number of HSP's better than 10.0 without gapping: 350
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 908
Number of HSP's gapped (non-prelim): 1580
length of query: 88
length of database: 59,974,054
effective HSP length: 64
effective length of query: 24
effective length of database: 49,465,190
effective search space: 1187164560
effective search space used: 1187164560
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Medicago: description of AC146722.4