BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146712.3 - phase: 0 /pseudo
         (276 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Y024_MYCPN (P75088) Probable GTP-binding protein MG024 homolog (...    33  0.76
NPBL_COPCI (Q00333) Rad9 protein (SCC2 homolog)                        31  3.8

>Y024_MYCPN (P75088) Probable GTP-binding protein MG024 homolog
           (B01_orf362)
          Length = 362

 Score = 33.1 bits (74), Expect = 0.76
 Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 4/89 (4%)

Query: 115 SPHLKPLNLEIKSHGLIKKMGSLSMKRGRVSRKSLDFVPTMAWKSGL*STPFNGLSYTTK 174
           +PHL  LN  +K H L   +   ++    +S  SLD      W   L  + + GL+   K
Sbjct: 217 NPHLTQLNQFLKQHNLPHAIPVCALLENELS--SLDANGRQDWLKELGLSDYQGLNQLIK 274

Query: 175 MSVDAAAGGSL--MNKNYTEAYALMKTWL 201
            + DA    S     K    A+A  K WL
Sbjct: 275 TAYDAIGLWSFFTFGKQEVRAWAFKKGWL 303


>NPBL_COPCI (Q00333) Rad9 protein (SCC2 homolog)
          Length = 2157

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 23/78 (29%), Positives = 34/78 (43%)

Query: 1    MAERTLKEYATPSMEEPQAIIVYPTVEGNNFEIKPALLNLVQQNQFSGSPTEDPNLHISS 60
            +A +TL+E   P +  P  + V PT   N  + K ALL+ V     + +   D    +  
Sbjct: 1343 LAMKTLEELWFPPLPPPSGMKVKPTSSSNPNQDKAALLSKVAIIMGTAANFRDRQSPLED 1402

Query: 61   FLRLSGTIKENQEAV*LH 78
             L    + KE  EA  LH
Sbjct: 1403 MLHKIISDKEGDEAASLH 1420


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.325    0.138    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,308,273
Number of Sequences: 164201
Number of extensions: 1191288
Number of successful extensions: 2756
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2756
Number of HSP's gapped (non-prelim): 2
length of query: 276
length of database: 59,974,054
effective HSP length: 109
effective length of query: 167
effective length of database: 42,076,145
effective search space: 7026716215
effective search space used: 7026716215
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 65 (29.6 bits)