BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146711.8 + phase: 0
(207 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YO91_CAEEL (P41842) Hypothetical protein T20B12.1 in chromosome III 33 0.61
YLE1_SCHPO (Q10451) Hypothetical protein C1093.01 in chromosome I 31 1.8
MRAW_RHOBA (Q7UFX8) S-adenosyl-methyltransferase mraW (EC 2.1.1.-) 31 2.3
YG35_METJA (Q59029) Hypothetical protein MJ1635 30 3.0
FRI2_RANCA (P07798) Ferritin, middle subunit (Ferritin M) (Ferri... 30 3.0
DDR1_RAT (Q63474) Epithelial discoidin domain receptor 1 precurs... 30 3.0
YPWA_BACSU (P50848) Hypothetical metalloprotease ypwA (EC 3.4.24.-) 30 4.0
YAY3_SCHPO (Q10211) Hypothetical protein C4H3.03c in chromosome I 30 4.0
K199_HUMAN (Q8WUJ3) Protein KIAA1199 precursor 30 4.0
YLP2_CAEEL (P34382) Hypothetical protein F02A9.2 in chromosome III 29 6.8
PURA_RHOBA (Q7UHW3) Adenylosuccinate synthetase (EC 6.3.4.4) (IM... 29 6.8
PMIP_HUMAN (Q99797) Mitochondrial intermediate peptidase, mitoch... 29 8.8
>YO91_CAEEL (P41842) Hypothetical protein T20B12.1 in chromosome III
Length = 787
Score = 32.7 bits (73), Expect = 0.61
Identities = 16/70 (22%), Positives = 38/70 (53%), Gaps = 5/70 (7%)
Query: 13 EATMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYAS 72
EA +++E+ + W +++ K G+++ AE ++++++Q P D H+ L +I +
Sbjct: 397 EALLILEK-----LEMWDGVIDCYKQLGQMDKAETLIRRLIEQKPNDSMLHVYLGDITRN 451
Query: 73 AGKWDNVIEM 82
+ IE+
Sbjct: 452 LEYFTKAIEL 461
>YLE1_SCHPO (Q10451) Hypothetical protein C1093.01 in chromosome I
Length = 1261
Score = 31.2 bits (69), Expect = 1.8
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 1 MIDLLGRAKRFEEATMLIEEGKN----PDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQ 55
++ LGRA+R E L +E K P + + T++NA G+ +AEK +M +Q
Sbjct: 932 VLSKLGRARRTTECWKLFQEMKESGLLPTSVTYGTVINAACRIGDESLAEKLFAEMENQ 990
>MRAW_RHOBA (Q7UFX8) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)
Length = 325
Score = 30.8 bits (68), Expect = 2.3
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 20/154 (12%)
Query: 52 MLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRL-KKTPAMSWVDIDREVHTFM 110
++D GG LL + A AG + + + RD + ++ SW+ D + F+
Sbjct: 48 IIDGTYGGGGHTRLLAEVLADAGSDSDTPRVIAIDRDPAVVRRDEQKSWIKDDPRIELFL 107
Query: 111 AGDLSHPRAHEISEMLHELIEKVITLGYNPDT--------KFVLQDLEEEKKISA----- 157
S P+A + ++ H V+ LG + D F + D E + +
Sbjct: 108 GSYESSPKALDALDLTH-ADALVLDLGLSSDQLADRNRGFTFTIDDAELDLRFDPENGVP 166
Query: 158 ----LYYHSEKLAIAFALWKTCGKNTAIRIFKNL 187
L HSEK IA A+++ + + RI K +
Sbjct: 167 AHRWLQQHSEK-EIADAIYRFGEERFSRRIAKQI 199
>YG35_METJA (Q59029) Hypothetical protein MJ1635
Length = 414
Score = 30.4 bits (67), Expect = 3.0
Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 15/105 (14%)
Query: 57 PRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSH 116
P +G T + LT ++ +D I+ LKK P + I+R L
Sbjct: 207 PIEGWTRVDLTELHRIKEVYDRKIDFLKK----LLKKFPLRAMRKINR---------LFE 253
Query: 117 PRAHEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYH 161
R + + + LH+L ++ L PD FV +DL + + + Y++
Sbjct: 254 RRRNRVKDFLHKLTIQLSRLF--PDAIFVFEDLNKRRMYKSKYFN 296
>FRI2_RANCA (P07798) Ferritin, middle subunit (Ferritin M) (Ferritin
X) (Ferritin H')
Length = 176
Score = 30.4 bits (67), Expect = 3.0
Identities = 29/101 (28%), Positives = 45/101 (43%), Gaps = 13/101 (12%)
Query: 39 HGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMS 98
H E E AEKFMK + GG +L +W N +E A L+L+KT +
Sbjct: 57 HEEREHAEKFMK----YQNKRGGRVVLQDIKKPERDEWGNTLEAMQAA--LQLEKTVNQA 110
Query: 99 WVDIDREVHTFMAGDLSHPRAHEI--SEMLHELIEKVITLG 137
+D+ + +A D P + SE L E ++ + +G
Sbjct: 111 LLDLHK-----LATDKVDPHLCDFLESEYLEEQVKDIKRIG 146
>DDR1_RAT (Q63474) Epithelial discoidin domain receptor 1 precursor
(EC 2.7.1.112) (Tyrosine kinase DDR) (Discoidin receptor
tyrosine kinase) (Tyrosine-protein kinase CAK) (Cell
adhesion kinase) (Protein-tyrosine kinase PTK-3)
Length = 910
Score = 30.4 bits (67), Expect = 3.0
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 86 GRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEIS 123
G + R K+ PAM+W VH + G L PRA IS
Sbjct: 301 GVECRFKRGPAMAWEG--EPVHHALGGSLGDPRARAIS 336
>YPWA_BACSU (P50848) Hypothetical metalloprotease ypwA (EC 3.4.24.-)
Length = 501
Score = 30.0 bits (66), Expect = 4.0
Identities = 14/49 (28%), Positives = 25/49 (50%)
Query: 121 EISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAF 169
E+ E + L+++V G PDT F+ + +EK+ Y ++L F
Sbjct: 176 ELKEAIIPLVKQVTASGNKPDTSFITKAFPKEKQKELSLYFLQELGYDF 224
>YAY3_SCHPO (Q10211) Hypothetical protein C4H3.03c in chromosome I
Length = 649
Score = 30.0 bits (66), Expect = 4.0
Identities = 17/72 (23%), Positives = 29/72 (39%)
Query: 86 GRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTKFV 145
G++ + M WV +DR + L P+ + E+ E ++ GYN + F
Sbjct: 436 GQERNFLYSKIMLWVALDRALRIAFTRSLPCPKHMVWMDTRDEIYEAIMDSGYNMEKGFF 495
Query: 146 LQDLEEEKKISA 157
Q E + A
Sbjct: 496 AQSFENNDILDA 507
>K199_HUMAN (Q8WUJ3) Protein KIAA1199 precursor
Length = 1361
Score = 30.0 bits (66), Expect = 4.0
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 9/47 (19%)
Query: 70 YASAGKWDNVIEMKSAGRDLRLKKTPAM---------SWVDIDREVH 107
Y S G W V+E A R L+LK+ A WV +D E H
Sbjct: 1297 YVSRGPWTRVLEKLGADRGLKLKEQMAFVGFKGSFRPIWVTLDTEDH 1343
>YLP2_CAEEL (P34382) Hypothetical protein F02A9.2 in chromosome III
Length = 182
Score = 29.3 bits (64), Expect = 6.8
Identities = 26/95 (27%), Positives = 40/95 (41%), Gaps = 3/95 (3%)
Query: 93 KTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTKFVLQDLEEE 152
K A + D E A P HE + LH++++ + + FV + + E
Sbjct: 58 KEVAKGYKDFKSEDDFLNALKEKSPTLHEKASKLHQIVKDKVNALNDEAKAFVKKAIAEG 117
Query: 153 KKISALYYHSEKLAIAFALWKTCGKNTAIRIFKNL 187
+KI A Y EK ++ KT K T I +K L
Sbjct: 118 RKIHAQYLAGEKPSL--DTLKTTAK-THIEAYKGL 149
>PURA_RHOBA (Q7UHW3) Adenylosuccinate synthetase (EC 6.3.4.4)
(IMP--aspartate ligase) (AdSS) (AMPSase)
Length = 437
Score = 29.3 bits (64), Expect = 6.8
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 107 HTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTKFVLQDLE 150
HT +AGD ++ H S +LH ++ VIT G + +LQ+++
Sbjct: 41 HTVVAGDETYKLHHIPSGILHSDVQNVITPGVVINPTTMLQEID 84
>PMIP_HUMAN (Q99797) Mitochondrial intermediate peptidase,
mitochondrial precursor (EC 3.4.24.59) (MIP)
Length = 713
Score = 28.9 bits (63), Expect = 8.8
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 116 HPRAHEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTC 175
HP + +++L E EK L Y P+T + L+ + Y + A+A +WK C
Sbjct: 590 HPLRNSTTDILKETQEKFYGLPYVPNTAWQLRFSHLVGYGARYYSYLMSRAVASMVWKEC 649
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.321 0.137 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,298,467
Number of Sequences: 164201
Number of extensions: 1016960
Number of successful extensions: 2434
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2429
Number of HSP's gapped (non-prelim): 13
length of query: 207
length of database: 59,974,054
effective HSP length: 105
effective length of query: 102
effective length of database: 42,732,949
effective search space: 4358760798
effective search space used: 4358760798
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Medicago: description of AC146711.8