BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146664.11 + phase: 0
(248 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
LYTF_BACSU (O07532) Endopeptidase lytF precursor (EC 3.4.-.-) (G... 32 1.1
YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein P... 32 1.4
STEA_EMENI (O74252) Transcription factor SteA 32 1.4
YB95_SCHPO (O42970) Hypothetical serine-rich protein C1E8.05 in ... 32 1.9
KLFF_MOUSE (Q9EPW2) Krueppel-like factor 15 (Cardiovascular Krup... 31 2.4
IDHP_ASPNG (P79089) Isocitrate dehydrogenase [NADP], mitochondri... 31 2.4
VIT2_CHICK (P02845) Vitellogenin II precursor (Major vitellogeni... 31 3.2
VIT2_FUNHE (Q98893) Vitellogenin II precursor (VTG II) [Contains... 30 4.2
YFGG_SCHPO (O13854) Hypothetical serine/threonine-rich protein C... 30 5.4
VIT1_FUNHE (Q90508) Vitellogenin I precursor (VTG I) [Contains: ... 30 7.1
TRPG_CAEEL (Q93971) Transient receptor potential channel (Abnorm... 30 7.1
YC18_HUMAN (Q9ULK2) Hypothetical protein KIAA1218 (Fragment) 29 9.3
PRY3_YEAST (P47033) PRY3 protein (Pathogen related in Sc 3) 29 9.3
MID2_YEAST (P36027) Mating process protein MID2 (Serine-rich pro... 29 9.3
KLFF_HUMAN (Q9UIH9) Krueppel-like factor 15 (Kidney-enriched kru... 29 9.3
ISOA_PSEUM (P26501) Isoamylase precursor (EC 3.2.1.68) 29 9.3
ISOA_PSEAY (P10342) Isoamylase precursor (EC 3.2.1.68) 29 9.3
HNF4_DROME (P49866) Transcription factor HNF-4 homolog (dHNF4) 29 9.3
GLI3_MOUSE (Q61602) Zinc finger protein GLI3 29 9.3
>LYTF_BACSU (O07532) Endopeptidase lytF precursor (EC 3.4.-.-)
(Gamma-D-glutamate-meso-diaminopimelate muropeptidase
lytF) (Cell wall-associated polypeptide CWBP49)
Length = 488
Score = 32.3 bits (72), Expect = 1.1
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 139 STESFSCRTNRSSVNKSTISSSRRSSRK------STGIWKVKLCITPEKLLEILSQEVST 192
+ S S + +S+ NKS+ SSS+ SS K STG +KV+L + K+ ++ ++
Sbjct: 138 TVSSSSSSSKKSNSNKSSSSSSKSSSNKSSSSSSSTGTYKVQLGDSLWKIANKVNMSIAE 197
Query: 193 KELIESVR---IVAKCGVTAASSGGCGISSTTSIVSDQWSLSS 232
+++ +++ I + SSG S S S+Q S ++
Sbjct: 198 LKVLNNLKSDTIYVNQVLKTKSSGSDTSSKDNSSKSNQTSATT 240
>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein
PB15E9.01c in chromosome I precursor
Length = 943
Score = 32.0 bits (71), Expect = 1.4
Identities = 44/202 (21%), Positives = 72/202 (34%), Gaps = 23/202 (11%)
Query: 50 NDQSSKPLCQFDELVAGQS--YYLLPMTVLSPNNKIDY-------PSTCATAETGGGGQI 100
+D ++ P D++V G + YL + L Y S+ T+ + +
Sbjct: 26 SDPANTPTILADDIVHGYTPATYLSSVPTLLKRATTSYNYNTSSASSSSLTSSSAASSSL 85
Query: 101 IRQGHVRSQSVPTTPLPAPYRMSLDYQYYQGVGLLKRTSTESFSCRTNRSSVNKSTISSS 160
+ S S +T +P SL TS+ S T SS+ S+I+SS
Sbjct: 86 TSSSSLASSSTNSTTSASPTSSSLTSS--------SATSSSLASSSTTSSSLASSSITSS 137
Query: 161 RRSSRKSTGIWKVKLCITPEKLLEILSQEVSTKELIESVR------IVAKCGVTAASSGG 214
+S T T L + ++ S A T++S
Sbjct: 138 SLASSSITSSSLASSSTTSSSLASSSTNSTTSATPTSSATSSSLSSTAASNSATSSSLAS 197
Query: 215 CGISSTTSIVSDQWSLSSSGRS 236
++STTS + SLSS+ S
Sbjct: 198 SSLNSTTSATATSSSLSSTAAS 219
>STEA_EMENI (O74252) Transcription factor SteA
Length = 692
Score = 32.0 bits (71), Expect = 1.4
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Query: 61 DELVAGQSYYLLPMTVLSPNNKIDYPSTCATAETGGGGQIIRQGHVRSQSVPT--TPLPA 118
DE Q Y +PM P N I + + G I + H R S+PT PA
Sbjct: 256 DESANSQMYTSIPMPNPIPQNLIKREADYGAIQYDRNGMPIARIHQRHSSMPTFVEYSPA 315
Query: 119 PYRMSLDYQYYQGVGL 134
P +S Y+ Y GL
Sbjct: 316 PSFVSSQYEDYSNRGL 331
>YB95_SCHPO (O42970) Hypothetical serine-rich protein C1E8.05 in
chromosome II precursor
Length = 317
Score = 31.6 bits (70), Expect = 1.9
Identities = 31/130 (23%), Positives = 56/130 (42%), Gaps = 4/130 (3%)
Query: 108 SQSVPTTPLPAPYRMSLDYQYYQGVGLLKRTSTESFSCRTNRSSVNKSTISSSRRSSRKS 167
S S ++P + + S + ++S+ S S + SS + S+ SS+ SS KS
Sbjct: 158 SSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSSSKSSASPSSSKS 217
Query: 168 TGIWKVKLCITPEKLLEILSQEVSTKELIESVRIVAKCGVTAASSGGCGISSTTSIVSDQ 227
+ + IT + S+ ++ + + + ++ASS +SS S S
Sbjct: 218 SSKFSSSSFITSTTP----ASSSSSGAIVSNAKTASTDDSSSASSATSSVSSVVSSASSA 273
Query: 228 WSLSSSGRSA 237
S S+S SA
Sbjct: 274 LSASASSASA 283
>KLFF_MOUSE (Q9EPW2) Krueppel-like factor 15 (Cardiovascular
Kruppel-like factor)
Length = 415
Score = 31.2 bits (69), Expect = 2.4
Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 46 IFPTNDQSSKPLCQF----DELVAGQSYYLLPMTVLSPNNKIDYPSTCATAET 94
+ P ++ S P C D L + Q Y++LP + ++ + P +CA+ ++
Sbjct: 5 LLPVDETFSSPKCSVGYLGDRLASRQPYHMLPSPISEDDSDVSSPCSCASPDS 57
>IDHP_ASPNG (P79089) Isocitrate dehydrogenase [NADP], mitochondrial
precursor (EC 1.1.1.42) (Oxalosuccinate decarboxylase)
(IDH) (NADP+-specific ICDH) (IDP)
Length = 498
Score = 31.2 bits (69), Expect = 2.4
Identities = 22/69 (31%), Positives = 36/69 (51%), Gaps = 1/69 (1%)
Query: 107 RSQSVPTTPLPAPYRMSLDYQYYQGVGLLKRTSTESFSCRTNRSSVNKSTISSSRRSSRK 166
RS +V + PL AP S ++ +S+ S S R+ RS + S++ SSR +S +
Sbjct: 13 RSFAVASPPLSAPLSSSAR-RFLSSSSSTISSSSSSVSTRSPRSLTSASSLLSSRTASAR 71
Query: 167 STGIWKVKL 175
TG+ + L
Sbjct: 72 WTGLSSLNL 80
>VIT2_CHICK (P02845) Vitellogenin II precursor (Major vitellogenin)
[Contains: Lipovitellin I (LVI); Phosvitin (PV);
Lipovitellin II (LVII); YGP40]
Length = 1850
Score = 30.8 bits (68), Expect = 3.2
Identities = 31/102 (30%), Positives = 47/102 (45%), Gaps = 14/102 (13%)
Query: 136 KRTSTESFSCRTNRSSVNKSTISSSRRSSRKSTGIWKVKLCITPEKLLEILSQEVSTKEL 195
KR+S++S + SS + S+ SSSR SS S+ K S S+K
Sbjct: 1180 KRSSSKSSNSSKRSSSSSSSSSSSSRSSSSSSSSSSNSK------------SSSSSSKSS 1227
Query: 196 IESVRIVAKCGVTAASSGGCGISSTTSIVSDQWSLSSSGRSA 237
S R ++ ++SS SS++S S S SSS +S+
Sbjct: 1228 SSSSR--SRSSSKSSSSSSSSSSSSSSKSSSSRSSSSSSKSS 1267
>VIT2_FUNHE (Q98893) Vitellogenin II precursor (VTG II) [Contains:
Lipovitellin 1 (LV1); Phosvitin (PV); Lipovitellin 2
(LV2)]
Length = 1687
Score = 30.4 bits (67), Expect = 4.2
Identities = 27/101 (26%), Positives = 47/101 (45%), Gaps = 8/101 (7%)
Query: 133 GLLKRTSTESFSCRTNRSSVNKSTISSSRRSSRKSTGIWKVKLCITPEKLLEILSQEVST 192
GL T S S ++RSS ++S+ SSS SS S+ + + + L +
Sbjct: 1080 GLKNSTKASSSSSGSSRSSRSRSSSSSSSSSSSSSS-----RSSSSSSRSSSSLRRNSKM 1134
Query: 193 KELIESVRIVAKCGVTAASSGGCGISSTTSIVSD---QWSL 230
+L + + I +K +++SS SS++S S +W L
Sbjct: 1135 LDLADPLNITSKRSSSSSSSSSSSSSSSSSSSSSSKTKWQL 1175
>YFGG_SCHPO (O13854) Hypothetical serine/threonine-rich protein
C19G12.16c in chromosome I precursor
Length = 670
Score = 30.0 bits (66), Expect = 5.4
Identities = 24/101 (23%), Positives = 46/101 (44%), Gaps = 1/101 (0%)
Query: 139 STESFSCRTNRSSVNKSTISSSRRSSRKSTGIWKVKLCITPEKLLEILSQEVSTKELIES 198
S SFS + +S T + S S+ ++T +V +PE+ ++ + E+
Sbjct: 527 SVSSFSSSPSPTSSFSGTSALSSSSNEETTTTTQVTYTTSPEETTTTMTTTTCSSRPEET 586
Query: 199 VRIVAKCGVTAASSGGCGISSTTSIVSDQWSLSSSGRSAPS 239
+ V+ T + SG S T++ S S+++S S+ S
Sbjct: 587 ISTVSTTS-TVSESGSSSASITSTYPSSTLSMTTSHLSSSS 626
>VIT1_FUNHE (Q90508) Vitellogenin I precursor (VTG I) [Contains:
Lipovitellin 1 (LV1); Phosvitin (PV); Lipovitellin 2
(LV2)]
Length = 1704
Score = 29.6 bits (65), Expect = 7.1
Identities = 30/102 (29%), Positives = 45/102 (43%), Gaps = 17/102 (16%)
Query: 138 TSTESFSCRTNRSSVNKSTISSSRRSSRKSTGIWKVKLCITPEKLLEILSQEVSTKELIE 197
+S+ S S +RSS + S+ SSS RSSRK L+ ++
Sbjct: 1085 SSSSSSSSSESRSSRSSSSSSSSSRSSRKID-----------------LAARTNSSSSSS 1127
Query: 198 SVRIVAKCGVTAASSGGCGISSTTSIVSDQWSLSSSGRSAPS 239
S R + +++SS SS++S S S SSS S+ S
Sbjct: 1128 SRRSRSSSSSSSSSSSSSSSSSSSSRRSSSSSSSSSSSSSRS 1169
>TRPG_CAEEL (Q93971) Transient receptor potential channel (Abnormal
gonad development protein 2)
Length = 2032
Score = 29.6 bits (65), Expect = 7.1
Identities = 29/119 (24%), Positives = 48/119 (39%), Gaps = 10/119 (8%)
Query: 80 NNKIDYPSTCATAETGG----GGQIIRQGHVRSQSVPTTPLPAPYRMSLDYQYYQGVGLL 135
N K D + + E G G + + +S +P P PY + Y +
Sbjct: 1195 NEKCDRETDASACEAGNRQIQNGGLTAEYGTFGESNGVSP-PPPYMRANSRSRYNNRSDM 1253
Query: 136 KRTSTESFSCRTNRSSVNKSTISSSRRSS--RKSTGIWKVKLCITPEKLLEILSQEVST 192
+TS+ F N S + KS I+S+ R + + G K+K+ + E S +ST
Sbjct: 1254 SKTSSVIFGSDPNLSKLQKSNITSTDRPNPMEQFQGTRKIKM---RRRFYEFYSAPIST 1309
>YC18_HUMAN (Q9ULK2) Hypothetical protein KIAA1218 (Fragment)
Length = 864
Score = 29.3 bits (64), Expect = 9.3
Identities = 32/141 (22%), Positives = 47/141 (32%), Gaps = 17/141 (12%)
Query: 35 NFITNEFQGHAIFPTNDQSSKPLCQFDELVAGQSYYLLPMTVLSPNNKIDYPSTCATAET 94
N +T+ + H +FP KP V S +P V + + ST TA
Sbjct: 174 NLLTSSSKQHTVFPAKGSRDKPCVP----VPVVSLEKIPNLVKADGANVKMNSTTTTA-- 227
Query: 95 GGGGQIIRQGHVRSQSVPTTPLPAPYRMSLDY-----QYYQGVGLLKRTSTESFSCRTNR 149
+ S +V T PL P MS + G G+L T + T
Sbjct: 228 ------VSASSTSSSAVSTPPLIKPVLMSKSVPPSPEKILNGKGILPTTIDKKHQNGTKN 281
Query: 150 SSVNKSTISSSRRSSRKSTGI 170
S+ +S K G+
Sbjct: 282 SNKPYRRLSEREFDPNKHCGV 302
>PRY3_YEAST (P47033) PRY3 protein (Pathogen related in Sc 3)
Length = 881
Score = 29.3 bits (64), Expect = 9.3
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Query: 78 SPNNKIDYPSTCATAETGGGGQIIRQGHVRSQSVPTTPLPAPYRMSLDYQYYQGVGLLKR 137
SP + + ST ++ TG +R S S TT L + DY +
Sbjct: 591 SPTDNAKHTSTYGSSSTGASLDSLRTTTSISVSSNTTQLVSTCTSESDYSDSPSFAISTA 650
Query: 138 TSTESFSCRTNRSSVNKSTISSSRRSSRKST 168
T+TES + TN + + ST S+ S+ ST
Sbjct: 651 TTTES-NLITNTITASCSTDSNFPTSAASST 680
>MID2_YEAST (P36027) Mating process protein MID2 (Serine-rich
protein SMS1) (Protein kinase A interference protein)
Length = 376
Score = 29.3 bits (64), Expect = 9.3
Identities = 25/109 (22%), Positives = 49/109 (44%)
Query: 135 LKRTSTESFSCRTNRSSVNKSTISSSRRSSRKSTGIWKVKLCITPEKLLEILSQEVSTKE 194
++ +S+ S + T RSSV++ + SSS SS + +T L S+
Sbjct: 29 VQSSSSNSSAVSTARSSVSRVSSSSSILSSSMVSSSSADSSSLTSSTSSRSLVSHTSSST 88
Query: 195 LIESVRIVAKCGVTAASSGGCGISSTTSIVSDQWSLSSSGRSAPSKVDA 243
I S+ + + +S+ +S+ S S +S+SS+ ++ S +
Sbjct: 89 SIASISFTSFSFSSDSSTSSSSSASSDSSSSSSFSISSTSATSESSTSS 137
>KLFF_HUMAN (Q9UIH9) Krueppel-like factor 15 (Kidney-enriched
kruppel-like factor)
Length = 416
Score = 29.3 bits (64), Expect = 9.3
Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 46 IFPTNDQSSKPLCQF----DELVAGQSYYLLPMTVLSPNNKIDYPSTCATAET 94
+ P ++ S P C D LV ++Y++LP V ++ P +C++ ++
Sbjct: 5 LLPVDENFSSPKCPVGYLGDRLVGRRAYHMLPSPVSEDDSDASSPCSCSSPDS 57
>ISOA_PSEUM (P26501) Isoamylase precursor (EC 3.2.1.68)
Length = 776
Score = 29.3 bits (64), Expect = 9.3
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Query: 65 AGQSYYLLPMTVLSPNNKIDYPSTCATAETGGGGQ---IIRQGHVRSQSVPTTPLPAPYR 121
+G SY + +P + PST +T Q +I + HVR + T +PA YR
Sbjct: 168 SGASYRTTDSGIYAPKGVVLVPSTQSTGTKPTRAQKDDVIYEVHVRGFTEQDTSIPAQYR 227
Query: 122 MSLDYQYYQGVGL 134
+ Y G GL
Sbjct: 228 GT-----YYGAGL 235
>ISOA_PSEAY (P10342) Isoamylase precursor (EC 3.2.1.68)
Length = 776
Score = 29.3 bits (64), Expect = 9.3
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Query: 65 AGQSYYLLPMTVLSPNNKIDYPSTCATAETGGGGQ---IIRQGHVRSQSVPTTPLPAPYR 121
+G SY + +P + PST +T Q +I + HVR + T +PA YR
Sbjct: 168 SGASYRTTDSGIYAPKGVVLVPSTQSTGTKPTRAQKDDVIYEVHVRGFTEQDTSIPAQYR 227
Query: 122 MSLDYQYYQGVGL 134
+ Y G GL
Sbjct: 228 GT-----YYGAGL 235
>HNF4_DROME (P49866) Transcription factor HNF-4 homolog (dHNF4)
Length = 666
Score = 29.3 bits (64), Expect = 9.3
Identities = 24/106 (22%), Positives = 45/106 (41%), Gaps = 5/106 (4%)
Query: 62 ELVAGQSYYLLPMTVLSPNNKIDYPSTCATAETGGGGQIIRQGHVRSQSVPTTPLPAPYR 121
E++ G P+ + PN DY S T GG Q+ + S+ T+ P +
Sbjct: 427 EMLLGGELADNPLPLSPPNQSNDYQSPTHTGNMEGGNQV----NSSLDSLATSGGPGSHS 482
Query: 122 MSLDYQYYQGVGLLKRTSTESFSCRTNRSSVNKSTISSSRRSSRKS 167
+ L+ Q+ Q + + ++ +SF ++ + SS S+ S
Sbjct: 483 LDLEVQHIQAL-IEANSADDSFRAYAASTAAAAAAAVSSSSSAPAS 527
>GLI3_MOUSE (Q61602) Zinc finger protein GLI3
Length = 1596
Score = 29.3 bits (64), Expect = 9.3
Identities = 29/97 (29%), Positives = 43/97 (43%), Gaps = 9/97 (9%)
Query: 148 NRSSVNKSTISSSRRSSRKSTGIWKVKLCITPEKLLEILS-----QEVSTKELIESVRIV 202
NR N STISS+ SSR+S+GI C + + E Q VS + + +
Sbjct: 845 NRRDSNTSTISSAYLSSRRSSGI---SPCFSSRRSSEASQAEGRPQNVSVADSYDPISTD 901
Query: 203 AKCGVTAASSGGCGISSTTSIVSDQWSLSSSGRSAPS 239
A + AS G G+ S S+ Q + +AP+
Sbjct: 902 ASRRSSEASQGD-GLPSLLSLTPVQQYALKAKYAAPT 937
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.314 0.130 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,608,914
Number of Sequences: 164201
Number of extensions: 1121147
Number of successful extensions: 2253
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 2236
Number of HSP's gapped (non-prelim): 27
length of query: 248
length of database: 59,974,054
effective HSP length: 107
effective length of query: 141
effective length of database: 42,404,547
effective search space: 5979041127
effective search space used: 5979041127
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)
Medicago: description of AC146664.11