BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146651.13 - phase: 0
(274 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UREG_SYNY3 (P72955) Urease accessory protein ureG 228 2e-59
UREG_MYCTU (P50051) Urease accessory protein ureG 224 1e-58
UREG_ECOLI (Q03287) Urease accessory protein ureG 222 7e-58
UREG_ACTPL (O54424) Urease accessory protein ureG 220 3e-57
UREG_HELPY (Q09066) Urease accessory protein ureG 219 4e-57
UREG_HELPJ (Q9ZMZ7) Urease accessory protein ureG 218 1e-56
UREG_HAEIN (P44396) Urease accessory protein ureG 218 1e-56
UREG_PROMI (Q06206) Urease accessory protein ureG 216 5e-56
UREG_KLEAE (P18319) Urease accessory protein ureG 214 2e-55
UREG_BORBR (O06709) Urease accessory protein ureG 211 1e-54
UREG_BACSB (Q07403) Urease accessory protein ureG 201 1e-51
UREG_STRSL (Q55057) Urease accessory protein ureG 189 8e-48
UREG_UREPA (Q56561) Urease accessory protein ureG 187 3e-47
UREG_STAXY (P42877) Urease accessory protein ureG 186 4e-47
UREG_YERPE (P52319) Urease accessory protein ureG 175 9e-44
UREG_YEREN (P42871) Urease accessory protein ureG 172 6e-43
HYPB_METJA (Q57884) Probable hydrogenase nickel incorporation pr... 90 7e-18
HYPB_RHILV (P28155) Hydrogenase nickel incorporation protein hypB 73 9e-13
HYPB_AZOVI (P31880) Hydrogenase nickel incorporation protein hypB 55 1e-07
HYPB_AZOCH (Q43949) Hydrogenase nickel incorporation protein hypB 52 1e-06
>UREG_SYNY3 (P72955) Urease accessory protein ureG
Length = 206
Score = 228 bits (580), Expect = 2e-59
Identities = 112/188 (59%), Positives = 142/188 (74%), Gaps = 1/188 (0%)
Query: 75 VGIGGPVGTGKTALMLALCQNLRDRYSLAAVTNDIFTKEDGEFLVKHKALPEERIRAVET 134
+GI GPVG+GKTAL+ ALC+ LR +Y LA VTNDI+T+ED +FLV+ +AL +RI VET
Sbjct: 8 IGIAGPVGSGKTALLEALCKALRQKYQLAVVTNDIYTQEDAQFLVRAEALTPDRILGVET 67
Query: 135 GGCPHAAIREDISINLGPLEEL-SNLYKADLLLCESGGDNLAANFSRELADYIIYIIDVS 193
GGCPH AIRED S+NL + +L + D++ ESGGDNLAA FS EL D +Y+IDV+
Sbjct: 68 GGCPHTAIREDASLNLAAIADLEARFMPLDMVFLESGGDNLAATFSPELVDLTLYVIDVA 127
Query: 194 GGDKIPRKGGPGITQADLLVINKTDLAQAIGADLGVMERDALRMRDGGPFVFAQVKHNVG 253
GDKIPRKGGPGIT++DLLVINK DLA +GADLG+M+RDA +MR PFVF +K G
Sbjct: 128 AGDKIPRKGGPGITKSDLLVINKIDLAPMVGADLGIMDRDAKKMRGEKPFVFTNLKTATG 187
Query: 254 VEEIVNHV 261
+ +V+ V
Sbjct: 188 LSTVVDFV 195
>UREG_MYCTU (P50051) Urease accessory protein ureG
Length = 224
Score = 224 bits (572), Expect = 1e-58
Identities = 117/223 (52%), Positives = 149/223 (66%), Gaps = 15/223 (6%)
Query: 37 HSHDGLAPHSHEPIYSPGFFSRRAQPLINRDFNERAFTVGIGGPVGTGKTALMLALCQNL 96
HSH PHSH P + +PL +G+GGPVG+GKTAL+ ALC+ L
Sbjct: 4 HSH----PHSHTVPARPRRVRKPGEPL----------RIGVGGPVGSGKTALVAALCRQL 49
Query: 97 RDRYSLAAVTNDIFTKEDGEFLVKHKALPEERIRAVETGGCPHAAIREDISINLGPLEEL 156
R SLA +TNDI+T ED +FL H LP++RI AV+TGGCPH AIR+DI+ NL ++EL
Sbjct: 50 RGELSLAVLTNDIYTTEDADFLRTHAVLPDDRIAAVQTGGCPHTAIRDDITANLDAIDEL 109
Query: 157 SNLYKA-DLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVIN 215
+ A DL+L ESGGDNL A FS L D I++IDV+GGDK+PRKGGPG+T +DLLV+N
Sbjct: 110 MAAHDALDLILVESGGDNLTATFSSGLVDAQIFVIDVAGGDKVPRKGGPGVTYSDLLVVN 169
Query: 216 KTDLAQAIGADLGVMERDALRMRDGGPFVFAQVKHNVGVEEIV 258
KTDLA +GADL VM RDA +RDG P V + + ++V
Sbjct: 170 KTDLAALVGADLAVMARDADAVRDGRPTVLQSLTEDPAASDVV 212
>UREG_ECOLI (Q03287) Urease accessory protein ureG
Length = 205
Score = 222 bits (566), Expect = 7e-58
Identities = 110/189 (58%), Positives = 141/189 (74%), Gaps = 1/189 (0%)
Query: 75 VGIGGPVGTGKTALMLALCQNLRDRYSLAAVTNDIFTKEDGEFLVKHKALPEERIRAVET 134
+G+GGPVG+GKTAL+ LC+ +RD Y +A VTNDI+T+ED + L + +AL +RI VET
Sbjct: 10 IGVGGPVGSGKTALLEVLCKAMRDTYQIAVVTNDIYTQEDAKILTRAEALDADRIIGVET 69
Query: 135 GGCPHAAIREDISINLGPLEELSNLYK-ADLLLCESGGDNLAANFSRELADYIIYIIDVS 193
GGCPH AIRED S+NL +EEL+ +K D++ ESGGDNL+A FS ELAD IY+IDV+
Sbjct: 70 GGCPHTAIREDASMNLAAVEELAIRHKNLDIVFVESGGDNLSATFSPELADLTIYVIDVA 129
Query: 194 GGDKIPRKGGPGITQADLLVINKTDLAQAIGADLGVMERDALRMRDGGPFVFAQVKHNVG 253
G+KIPRKGGPGIT +DLLVINK DLA +GA L VME D RMR P+VF +K VG
Sbjct: 130 EGEKIPRKGGPGITHSDLLVINKIDLAPYVGASLEVMEADTARMRPVKPYVFTNLKKKVG 189
Query: 254 VEEIVNHVL 262
+E I+ ++
Sbjct: 190 LETIIEFII 198
>UREG_ACTPL (O54424) Urease accessory protein ureG
Length = 211
Score = 220 bits (560), Expect = 3e-57
Identities = 105/188 (55%), Positives = 142/188 (74%), Gaps = 1/188 (0%)
Query: 75 VGIGGPVGTGKTALMLALCQNLRDRYSLAAVTNDIFTKEDGEFLVKHKALPEERIRAVET 134
+G+ GPVG GKTAL+ L + + +YS+A +TNDI+T+ED EFL K+ LP ERI VET
Sbjct: 7 IGVAGPVGAGKTALIERLTREIASKYSVAVITNDIYTQEDAEFLTKNSLLPPERIMGVET 66
Query: 135 GGCPHAAIREDISINLGPLEEL-SNLYKADLLLCESGGDNLAANFSRELADYIIYIIDVS 193
GGCPH AIRED S+NL ++E+ + + +L+ ESGGDNL+A FS +LAD I++IDV+
Sbjct: 67 GGCPHTAIREDASMNLEAVDEMVARFPEVELIFIESGGDNLSATFSPDLADVTIFVIDVA 126
Query: 194 GGDKIPRKGGPGITQADLLVINKTDLAQAIGADLGVMERDALRMRDGGPFVFAQVKHNVG 253
G+KIPRKGGPGI+++DLLVINKTDLA +GADL VMERDA RMR+G PF+F + N
Sbjct: 127 QGEKIPRKGGPGISRSDLLVINKTDLAPFVGADLSVMERDARRMRNGQPFIFTNLMKNEN 186
Query: 254 VEEIVNHV 261
++ ++ +
Sbjct: 187 LDGVIGWI 194
>UREG_HELPY (Q09066) Urease accessory protein ureG
Length = 199
Score = 219 bits (559), Expect = 4e-57
Identities = 105/185 (56%), Positives = 142/185 (76%), Gaps = 1/185 (0%)
Query: 75 VGIGGPVGTGKTALMLALCQNLRDRYSLAAVTNDIFTKEDGEFLVKHKALPEERIRAVET 134
+G+ GPVG+GKTAL+ AL +++ Y +A +TNDI+TKED EF+ K+ +P ERI VET
Sbjct: 4 IGVCGPVGSGKTALIEALTRHMSKDYDMAVITNDIYTKEDAEFMCKNSVMPRERIIGVET 63
Query: 135 GGCPHAAIREDISINLGPLEELSNLY-KADLLLCESGGDNLAANFSRELADYIIYIIDVS 193
GGCPH AIRED S+NL +EE+ + +LLL ESGGDNL+A F+ ELAD+ I++IDV+
Sbjct: 64 GGCPHTAIREDASMNLEAVEEMHGRFPNLELLLIESGGDNLSATFNPELADFTIFVIDVA 123
Query: 194 GGDKIPRKGGPGITQADLLVINKTDLAQAIGADLGVMERDALRMRDGGPFVFAQVKHNVG 253
GDKIPRKGGPGIT++DLLVINK DLA +GADL VMERD+ +MR PF+F ++ G
Sbjct: 124 EGDKIPRKGGPGITRSDLLVINKIDLAPYVGADLKVMERDSKKMRGEKPFIFTNIRAKEG 183
Query: 254 VEEIV 258
+++++
Sbjct: 184 LDDVI 188
>UREG_HELPJ (Q9ZMZ7) Urease accessory protein ureG
Length = 199
Score = 218 bits (556), Expect = 1e-56
Identities = 104/185 (56%), Positives = 142/185 (76%), Gaps = 1/185 (0%)
Query: 75 VGIGGPVGTGKTALMLALCQNLRDRYSLAAVTNDIFTKEDGEFLVKHKALPEERIRAVET 134
+G+ GPVG+GKTAL+ AL +++ Y +A +TNDI+TKED EF+ K+ +P +RI VET
Sbjct: 4 IGVCGPVGSGKTALIEALTRHMSKDYDMAVITNDIYTKEDAEFMCKNSVMPRDRIIGVET 63
Query: 135 GGCPHAAIREDISINLGPLEELSNLY-KADLLLCESGGDNLAANFSRELADYIIYIIDVS 193
GGCPH AIRED S+NL +EE+ + +LLL ESGGDNL+A F+ ELAD+ I++IDV+
Sbjct: 64 GGCPHTAIREDASMNLEAVEEMHGRFPNLELLLIESGGDNLSATFNPELADFTIFVIDVA 123
Query: 194 GGDKIPRKGGPGITQADLLVINKTDLAQAIGADLGVMERDALRMRDGGPFVFAQVKHNVG 253
GDKIPRKGGPGIT++DLLVINK DLA +GADL VMERD+ +MR PF+F ++ G
Sbjct: 124 EGDKIPRKGGPGITRSDLLVINKIDLAPYVGADLKVMERDSKKMRGEKPFIFTNIRAKEG 183
Query: 254 VEEIV 258
+++++
Sbjct: 184 LDDVI 188
>UREG_HAEIN (P44396) Urease accessory protein ureG
Length = 225
Score = 218 bits (556), Expect = 1e-56
Identities = 108/207 (52%), Positives = 146/207 (70%), Gaps = 2/207 (0%)
Query: 57 SRRAQPLIN-RDFNERAFTVGIGGPVGTGKTALMLALCQNLRDRYSLAAVTNDIFTKEDG 115
S +IN R+ +G+ GPVG GKTAL+ L + + +YS+A +TNDI+T+ED
Sbjct: 2 SNTVATMINKRNIMRNYIKIGVAGPVGAGKTALIEKLTREIASKYSVAVITNDIYTQEDA 61
Query: 116 EFLVKHKALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLYK-ADLLLCESGGDNL 174
EFL K+ LP ERI VETGGCPH AIRED S+NL ++E+ + +++ ESGGDNL
Sbjct: 62 EFLTKNSLLPPERIMGVETGGCPHTAIREDASMNLEAVDEMVTRFPDVEIVFIESGGDNL 121
Query: 175 AANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLAQAIGADLGVMERDA 234
+A FS +LAD I++IDV+ G+KIPRKGGPGIT++DLLVINKTDLA +GADL VMERDA
Sbjct: 122 SATFSPDLADVTIFVIDVAQGEKIPRKGGPGITRSDLLVINKTDLAPFVGADLSVMERDA 181
Query: 235 LRMRDGGPFVFAQVKHNVGVEEIVNHV 261
RMR+G PF+F + ++ ++ +
Sbjct: 182 RRMRNGQPFIFTNLMKKENLDGVIGWI 208
>UREG_PROMI (Q06206) Urease accessory protein ureG
Length = 205
Score = 216 bits (550), Expect = 5e-56
Identities = 105/189 (55%), Positives = 140/189 (73%), Gaps = 1/189 (0%)
Query: 75 VGIGGPVGTGKTALMLALCQNLRDRYSLAAVTNDIFTKEDGEFLVKHKALPEERIRAVET 134
+G+GGPVG+GKTAL+ LC+ +RD Y +A VTNDI+T+ED + L + +AL +RI VET
Sbjct: 10 IGVGGPVGSGKTALLEVLCKAMRDSYQIAVVTNDIYTQEDAKILTRAQALDADRIIGVET 69
Query: 135 GGCPHAAIREDISINLGPLEELSNLYK-ADLLLCESGGDNLAANFSRELADYIIYIIDVS 193
GGCPH AIRED S+NL +EEL+ +K D++ ESGGDNL+A FS ELAD + +IDV+
Sbjct: 70 GGCPHTAIREDASMNLAAVEELAMRHKNLDIVFVESGGDNLSATFSPELADLLFMLIDVA 129
Query: 194 GGDKIPRKGGPGITQADLLVINKTDLAQAIGADLGVMERDALRMRDGGPFVFAQVKHNVG 253
G+KIPRKGGPGIT D++VINK DLA +GA L VME D +MR P+VF +K VG
Sbjct: 130 EGEKIPRKGGPGITHPDMMVINKIDLAPYVGASLEVMEADTAKMRPVKPYVFTNLKEKVG 189
Query: 254 VEEIVNHVL 262
+E I++ ++
Sbjct: 190 LETIIDFII 198
>UREG_KLEAE (P18319) Urease accessory protein ureG
Length = 205
Score = 214 bits (544), Expect = 2e-55
Identities = 110/185 (59%), Positives = 133/185 (71%), Gaps = 1/185 (0%)
Query: 75 VGIGGPVGTGKTALMLALCQNLRDRYSLAAVTNDIFTKEDGEFLVKHKALPEERIRAVET 134
VG+GGPVG+GKTAL+ ALC+ +RD + LA VTNDI+TKED L + AL ERI VET
Sbjct: 10 VGVGGPVGSGKTALLEALCKAMRDTWQLAVVTNDIYTKEDQRILTEAGALAPERIVGVET 69
Query: 135 GGCPHAAIREDISINLGPLEELSNLY-KADLLLCESGGDNLAANFSRELADYIIYIIDVS 193
GGCPH AIRED S+NL +E LS + DL+ ESGGDNL+A FS ELAD IY+IDV+
Sbjct: 70 GGCPHTAIREDASMNLAAVEALSEKFGNLDLIFVESGGDNLSATFSPELADLTIYVIDVA 129
Query: 194 GGDKIPRKGGPGITQADLLVINKTDLAQAIGADLGVMERDALRMRDGGPFVFAQVKHNVG 253
G+KIPRKGGPGIT++D LVINKTDLA +GA L VM D RMR P+ F +K G
Sbjct: 130 EGEKIPRKGGPGITKSDFLVINKTDLAPYVGASLEVMASDTQRMRGDRPWTFTNLKQGDG 189
Query: 254 VEEIV 258
+ I+
Sbjct: 190 LSTII 194
>UREG_BORBR (O06709) Urease accessory protein ureG
Length = 214
Score = 211 bits (538), Expect = 1e-54
Identities = 104/185 (56%), Positives = 135/185 (72%), Gaps = 1/185 (0%)
Query: 75 VGIGGPVGTGKTALMLALCQNLRDRYSLAAVTNDIFTKEDGEFLVKHKALPEERIRAVET 134
VG+GGPVG+GKT L+ +C+ + ++ L A+TNDI+TKED L ALP ERI VET
Sbjct: 19 VGVGGPVGSGKTTLLEMVCKAMYPQFDLIAITNDIYTKEDQRLLTLSGALPPERILGVET 78
Query: 135 GGCPHAAIREDISINLGPLEELSNLYK-ADLLLCESGGDNLAANFSRELADYIIYIIDVS 193
GGCPH AIRED SINL ++++ + AD++ ESGGDNLAA FS EL+D +YIIDV+
Sbjct: 79 GGCPHTAIREDASINLIAIDQMLEQFPDADIVFVESGGDNLAATFSPELSDLTLYIIDVA 138
Query: 194 GGDKIPRKGGPGITQADLLVINKTDLAQAIGADLGVMERDALRMRDGGPFVFAQVKHNVG 253
G+KIPRKGGPGIT++DL +INKTDLA +GADL VME D RMR PFV +K G
Sbjct: 139 SGEKIPRKGGPGITKSDLFIINKTDLAPYVGADLAVMEADTRRMRGDKPFVMCNLKTGDG 198
Query: 254 VEEIV 258
+++++
Sbjct: 199 LDQVI 203
>UREG_BACSB (Q07403) Urease accessory protein ureG
Length = 204
Score = 201 bits (512), Expect = 1e-51
Identities = 99/188 (52%), Positives = 131/188 (69%), Gaps = 1/188 (0%)
Query: 75 VGIGGPVGTGKTALMLALCQNLRDRYSLAAVTNDIFTKEDGEFLVKHKALPEERIRAVET 134
+GIGGPVG GKT L+ L + + S+A VTNDI+TKED +FL+KH LP +R+ VET
Sbjct: 6 IGIGGPVGAGKTMLVEKLTRAMHKELSIAVVTNDIYTKEDAQFLLKHGVLPADRVIGVET 65
Query: 135 GGCPHAAIREDISINLGPLEELSNLYK-ADLLLCESGGDNLAANFSRELADYIIYIIDVS 193
GGCPH AIRED S+N ++EL + +L+ ESGGDNLAA FS EL D+ IYIIDV+
Sbjct: 66 GGCPHTAIREDASMNFPAIDELKERHPDLELIFIESGGDNLAATFSPELVDFSIYIIDVA 125
Query: 194 GGDKIPRKGGPGITQADLLVINKTDLAQAIGADLGVMERDALRMRDGGPFVFAQVKHNVG 253
G+KIPRKGG G+ ++ L +INK DLA +GA L VMERD L R P++F +K +G
Sbjct: 126 QGEKIPRKGGQGMIKSVLFIINKIDLAPYVGASLEVMERDTLAARGDKPYIFTNLKDEIG 185
Query: 254 VEEIVNHV 261
+ E++ +
Sbjct: 186 LAEVLEWI 193
>UREG_STRSL (Q55057) Urease accessory protein ureG
Length = 204
Score = 189 bits (479), Expect = 8e-48
Identities = 96/190 (50%), Positives = 130/190 (67%), Gaps = 3/190 (1%)
Query: 70 ERAFTVGIGGPVGTGKTALMLALCQNLRDRYSLAAVTNDIFTKEDGEFLVKHKALPEERI 129
+R +G+GGPVG+GKT L+ L + + D +LA +TNDI+TKED FL K+ +L E+RI
Sbjct: 3 KRTVIIGVGGPVGSGKTLLLERLTRRMSD-LNLAVITNDIYTKEDALFLAKNSSLDEDRI 61
Query: 130 RAVETGGCPHAAIREDISINLGPLEELSNLYKADL--LLCESGGDNLAANFSRELADYII 187
VETGGCPH AIRED S+N +E L + DL + ESGGDNLAA FS +L D+ I
Sbjct: 62 IGVETGGCPHTAIREDASMNFEAIETLQERFNHDLDVIFLESGGDNLAATFSPDLVDFTI 121
Query: 188 YIIDVSGGDKIPRKGGPGITQADLLVINKTDLAQAIGADLGVMERDALRMRDGGPFVFAQ 247
YIIDV+ G+KIPRK G G+ ++DL +INKTDLA +GA+L M D L R+ F+F
Sbjct: 122 YIIDVAQGEKIPRKAGQGMIKSDLFLINKTDLAPYVGANLDRMREDTLHFRNEDSFIFTN 181
Query: 248 VKHNVGVEEI 257
+ ++ V+E+
Sbjct: 182 LNNDDNVKEV 191
>UREG_UREPA (Q56561) Urease accessory protein ureG
Length = 206
Score = 187 bits (474), Expect = 3e-47
Identities = 94/194 (48%), Positives = 131/194 (67%), Gaps = 2/194 (1%)
Query: 70 ERAFTVGIGGPVGTGKTALMLALCQNLRDR-YSLAAVTNDIFTKEDGEFLVKHKALPEER 128
+R +G+GGPVG GKT L+ L + L + YS+AA+TNDI+TKED L+ LP +R
Sbjct: 2 KRPLIIGVGGPVGAGKTMLIERLTRYLSTKGYSMAAITNDIYTKEDARILLNTSVLPADR 61
Query: 129 IRAVETGGCPHAAIREDISINLGPLEELSNLYK-ADLLLCESGGDNLAANFSRELADYII 187
I VETGGCPH AIRED S+N +EE+ + + LL ESGGDNL+A FS +L D+ I
Sbjct: 62 IAGVETGGCPHTAIREDASMNFAAIEEMCDKHPDLQLLFLESGGDNLSATFSPDLVDFSI 121
Query: 188 YIIDVSGGDKIPRKGGPGITQADLLVINKTDLAQAIGADLGVMERDALRMRDGGPFVFAQ 247
YIIDV+ G+KIPRKGG G+ ++DL +INK DLA +GA++ VM+ D L+ R F
Sbjct: 122 YIIDVAQGEKIPRKGGQGMIKSDLFIINKVDLAPYVGANVEVMKADTLKSRGNKDFFVTN 181
Query: 248 VKHNVGVEEIVNHV 261
+K + G++ + + +
Sbjct: 182 LKTDEGLKSVADWI 195
>UREG_STAXY (P42877) Urease accessory protein ureG
Length = 204
Score = 186 bits (473), Expect = 4e-47
Identities = 95/190 (50%), Positives = 124/190 (65%), Gaps = 1/190 (0%)
Query: 75 VGIGGPVGTGKTALMLALCQNLRDRYSLAAVTNDIFTKEDGEFLVKHKALPEERIRAVET 134
+G+GGPVG GK L+ + + L S+ +TNDI+TKED + LV LPE+RI VET
Sbjct: 7 IGVGGPVGAGKHELIEKIVKRLAKDMSIGVITNDIYTKEDEKILVNSGVLPEDRIIGVET 66
Query: 135 GGCPHAAIREDISINLGPLEELSNLYK-ADLLLCESGGDNLAANFSRELADYIIYIIDVS 193
GGCPH AIRED S+N ++EL +L+ ESGGDNLAA FS EL D+ IYIIDV+
Sbjct: 67 GGCPHTAIREDASMNFAAIDELKERNDDIELIFIESGGDNLAATFSPELVDFSIYIIDVA 126
Query: 194 GGDKIPRKGGPGITQADLLVINKTDLAQAIGADLGVMERDALRMRDGGPFVFAQVKHNVG 253
G+KIPRKGG G+ ++D VINKTDLA +GA L M D R PF F +K + G
Sbjct: 127 QGEKIPRKGGQGMIKSDFFVINKTDLAPYVGASLERMAEDTKVFRGNRPFTFTNLKTDEG 186
Query: 254 VEEIVNHVLQ 263
++E++ + Q
Sbjct: 187 LDEVIEWIEQ 196
>UREG_YERPE (P52319) Urease accessory protein ureG
Length = 220
Score = 175 bits (444), Expect = 9e-44
Identities = 92/193 (47%), Positives = 128/193 (65%), Gaps = 4/193 (2%)
Query: 75 VGIGGPVGTGKTALMLALCQNLRDR-YSLAAVTNDIFTKEDGEFLVK--HKALPEERIRA 131
+GIGGPVG+GKTA++ + L R +TNDI T ED + + + L EE+I
Sbjct: 14 IGIGGPVGSGKTAIIEVITPILIKRGIKPLIITNDIVTTEDAKQVKRTLKGILDEEKILG 73
Query: 132 VETGGCPHAAIREDISINLGPLEELSNLY-KADLLLCESGGDNLAANFSRELADYIIYII 190
VETG CPH A+RED S+N+ +EE+ + ++DL++ ESGGDNL FS LAD+ IY+I
Sbjct: 74 VETGACPHTAVREDPSMNIAAVEEMEERFPESDLIMIESGGDNLTLTFSPALADFYIYVI 133
Query: 191 DVSGGDKIPRKGGPGITQADLLVINKTDLAQAIGADLGVMERDALRMRDGGPFVFAQVKH 250
DV+ G+KIPRK GPG+ QAD+LVINK DLA +GA L VME D +R P++ K
Sbjct: 134 DVAEGEKIPRKNGPGLVQADILVINKIDLAPYVGASLDVMESDTKVVRGNRPYILTNCKT 193
Query: 251 NVGVEEIVNHVLQ 263
G+EE+V+ +++
Sbjct: 194 GQGIEELVDMIMR 206
>UREG_YEREN (P42871) Urease accessory protein ureG
Length = 221
Score = 172 bits (437), Expect = 6e-43
Identities = 92/201 (45%), Positives = 130/201 (63%), Gaps = 4/201 (1%)
Query: 67 DFNERAFTVGIGGPVGTGKTALMLALCQNLRDR-YSLAAVTNDIFTKEDGEFLVK--HKA 123
D ++ +GIGGPVG+GKTA++ + L R +TNDI T ED + + +
Sbjct: 7 DKRKKITRIGIGGPVGSGKTAIIEVITPILIKRGIKPLIITNDIVTTEDAKQVKRTLKGI 66
Query: 124 LPEERIRAVETGGCPHAAIREDISINLGPLEELSNLYK-ADLLLCESGGDNLAANFSREL 182
L EE+I VETG CPH A+RED S+N+ +EE+ + ++L++ ESGGDNL FS L
Sbjct: 67 LDEEKILGVETGACPHTAVREDPSMNIAAVEEMEERFPDSNLIMIESGGDNLTLTFSPAL 126
Query: 183 ADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLAQAIGADLGVMERDALRMRDGGP 242
AD+ IY+IDV+ G+KIPRK GPG+ QAD+LVINK DLA +GA L VME D +R P
Sbjct: 127 ADFYIYVIDVAEGEKIPRKNGPGLVQADILVINKIDLAPYVGASLDVMESDTKVVRGERP 186
Query: 243 FVFAQVKHNVGVEEIVNHVLQ 263
++ K G+EE+V+ +++
Sbjct: 187 YILTNCKTGQGIEELVDMIMR 207
>HYPB_METJA (Q57884) Probable hydrogenase nickel incorporation
protein hypB
Length = 221
Score = 89.7 bits (221), Expect = 7e-18
Identities = 65/185 (35%), Positives = 97/185 (52%), Gaps = 13/185 (7%)
Query: 79 GPVGTGKTALMLALCQNLRDRYSLAAVTNDIFTKEDGEFLVKHKALPEERIRAVETGGCP 138
G +G+GKT L+ L NL+D+Y +A + D+ K D E + KH A ++ + TG
Sbjct: 40 GAIGSGKTLLIEKLIDNLKDKYKIACIAGDVIAKFDAERMEKHGA----KVVPLNTGKEC 95
Query: 139 HAAIREDISINLGPLEELSNLYKADLLLCESGGDNLA-ANFSRELADYIIYIIDVSGGDK 197
H D + LE+L NL + DLL E+ G+ + A+F I+ I G D
Sbjct: 96 HL----DAHLVGHALEDL-NLDEIDLLFIENVGNLICPADFDLGTHKRIVVISTTEGDDT 150
Query: 198 IPRKGGPGITQ-ADLLVINKTDLAQAIGADLGVMERDALRMRDGGPFVFAQVKHNVGVEE 256
I + PGI + ADL+VINK DLA A+GAD+ ME DA R+ V +K G ++
Sbjct: 151 IEKH--PGIMKTADLIVINKIDLADAVGADIKKMENDAKRINPDAEVVLLSLKTMEGFDK 208
Query: 257 IVNHV 261
++ +
Sbjct: 209 VLEFI 213
>HYPB_RHILV (P28155) Hydrogenase nickel incorporation protein hypB
Length = 299
Score = 72.8 bits (177), Expect = 9e-13
Identities = 71/255 (27%), Positives = 110/255 (42%), Gaps = 46/255 (18%)
Query: 6 DHTHVHDHDHHHHDHDHKHGDSFIGADGKVYHSHDGLAPHSHEPIYSPGFFSRR------ 59
D H HDHDH HH DH+H D DG V++S G+A ++ PG R
Sbjct: 30 DGHHDHDHDHDHHRGDHEHDDHHHAEDGSVHYS-KGIA-----GVHVPGMSQERIIQVEK 83
Query: 60 -------AQPLINRDFNER--AFTVGIGGPVGTGKTALMLALCQNLRDRYSLAAVTNDIF 110
A NR ER F + G+GKT+L++ ++L+DR S++ + D
Sbjct: 84 DILSKNDAYAAENRRHFERQGVFALNFVSSPGSGKTSLLVRTIKDLKDRLSISVIEGDQQ 143
Query: 111 TKEDGEFLVKHKALPEERIRAVETG-GC-------PHAAIREDISINLGPLEELSNLYKA 162
T D + + A R + TG GC HA ED++ G + N+
Sbjct: 144 TSNDAARIRETGA----RAIQINTGKGCHLDAHMVGHAV--EDLAPEPGSALFIENVGN- 196
Query: 163 DLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLAQA 222
L+C + D A + + ++ V+ G+ P K ADL+++NK DL
Sbjct: 197 --LVCPAAFDLGEA--------HKVVVLSVTEGEDKPLKYPDMFAAADLMILNKADLLPH 246
Query: 223 IGADLGVMERDALRM 237
+ + G +ALR+
Sbjct: 247 LDFNTGFCIANALRV 261
>HYPB_AZOVI (P31880) Hydrogenase nickel incorporation protein hypB
Length = 303
Score = 55.5 bits (132), Expect = 1e-07
Identities = 64/240 (26%), Positives = 102/240 (41%), Gaps = 29/240 (12%)
Query: 5 GDHTHVHDHDHHHHDHDHKHGDSFI-----GADGKVYHSHDGLAPHSHEPIYSPGFFSRR 59
G+H H H HDHHHH+H + A G H G A +H P S R
Sbjct: 16 GEHHH-HGHDHHHHEHPFVRRPAPAEAAPPAAGGPNLHFGQGPA-RAHAPGLSQSRMLRI 73
Query: 60 AQPLINRDFNERA-----------FTVGIGGPVGTGKTALMLALCQNLRDRYSLAAVTND 108
Q ++ ++ A F + + G+GKT+L+ + L R LA + D
Sbjct: 74 EQDILGKNDRYAAENRARFEALSLFVLNLVSSPGSGKTSLLTRTIELLGRRRPLAVIEGD 133
Query: 109 IFTKEDGEFLVKHKALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLYKADLLLCE 168
T D ++ +P +I + GC A + L L++L + LL E
Sbjct: 134 QQTDHDAA-RIRATGVPAVQINTGK--GCHLDA--HMVGHALARLDDL----EGGLLFIE 184
Query: 169 SGGDNLAANFSRELAD-YIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLAQAIGADL 227
+ G NL + +L + + + I+ V+ G+ P K ADL+++NKTDL + D+
Sbjct: 185 NVG-NLVCPAAFDLGEAHKVAILSVTEGEDKPLKYPDMFHAADLMLLNKTDLLPHLDFDV 243
>HYPB_AZOCH (Q43949) Hydrogenase nickel incorporation protein hypB
Length = 305
Score = 52.4 bits (124), Expect = 1e-06
Identities = 64/241 (26%), Positives = 98/241 (40%), Gaps = 28/241 (11%)
Query: 4 GGDHTHVHDHDHHHHDHDHKHGDSFIGADGKVYHS---HDGLAP-HSHEPIYSPGFFSRR 59
G H H +DH HHHHDH + A V H G P +H P S +
Sbjct: 16 GEHHHHGYDHGHHHHDHAFVRRPAPAEAAPLVVEGLNLHFGQGPARAHAPGLSQSRMVQI 75
Query: 60 AQPLINRDFNERA-----------FTVGIGGPVGTGKTALMLALCQNLRDRYSLAAVTND 108
Q ++ ++ A F + + G+GKT L+ + L LA + D
Sbjct: 76 EQDILGKNDRYAAENRARFEALSLFVLNLVSSPGSGKTTLLTKTIELLGRHRPLAVIEGD 135
Query: 109 IFTKEDGEFLVKHKALPEERIRAVETG-GCPHAAIREDISINLGPLEELSNLYKADLLLC 167
T D ++ +P + V TG GC D + E+L L LL
Sbjct: 136 QQTDHDAA-RIRATGVPAVQ---VNTGKGC-----HLDAHMVGRAFEQLEGL-DGGLLFI 185
Query: 168 ESGGDNLAANFSRELAD-YIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLAQAIGAD 226
E+ G NL + +L + + + I+ V+ G+ P K ADL+++NKTDL + D
Sbjct: 186 ENVG-NLVCPAAFDLGEAHKVAILSVTEGEDKPLKYPDMFHAADLMLLNKTDLLPHLDFD 244
Query: 227 L 227
+
Sbjct: 245 V 245
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.319 0.139 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,099,029
Number of Sequences: 164201
Number of extensions: 1642777
Number of successful extensions: 9350
Number of sequences better than 10.0: 220
Number of HSP's better than 10.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 101
Number of HSP's that attempted gapping in prelim test: 7274
Number of HSP's gapped (non-prelim): 788
length of query: 274
length of database: 59,974,054
effective HSP length: 109
effective length of query: 165
effective length of database: 42,076,145
effective search space: 6942563925
effective search space used: 6942563925
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Medicago: description of AC146651.13