BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146632.4 - phase: 0
(1038 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
POLX_TOBAC (P10978) Retrovirus-related Pol polyprotein from tran... 513 e-144
COPI_DROME (P04146) Copia protein (Gag-int-pol protein) [Contain... 320 1e-86
M810_ARATH (P92519) Hypothetical mitochondrial protein AtMg00810... 250 2e-65
YCH4_YEAST (P25600) Transposon Ty5-1 34.5 kDa hypothetical protein 160 2e-38
YJL3_YEAST (P47024) Transposon Ty4 207.7 kDa hypothetical protein 122 5e-27
YMU0_YEAST (Q04670) Transposon Ty1 protein B 120 1e-26
YMT5_YEAST (Q04214) Transposon Ty1 protein B 118 9e-26
YJZ9_YEAST (P47100) Transposon Ty1 protein B 118 9e-26
YME4_YEAST (Q04711) Transposon Ty1 protein B 116 3e-25
YMD9_YEAST (Q03434) Transposon Ty1 protein B 113 2e-24
M820_ARATH (P92520) Hypothetical mitochondrial protein AtMg00820... 110 2e-23
YJZ7_YEAST (P47098) Transposon Ty1 protein B 110 3e-23
YCB9_YEAST (P25384) Transposon Ty2 protein B (Ty1-17 protein B) 108 7e-23
M240_ARATH (P93290) Hypothetical mitochondrial protein AtMg00240... 76 4e-13
POL_SFV1 (P23074) Pol polyprotein [Contains: Protease (EC 3.4.23... 58 1e-07
POL_FOAMV (P14350) Pol polyprotein [Contains: Reverse transcript... 57 2e-07
POL_SFV3L (P27401) Pol polyprotein [Contains: Protease (EC 3.4.2... 57 3e-07
M300_ARATH (P93293) Hypothetical mitochondrial protein AtMg00300... 55 1e-06
M710_ARATH (P92512) Hypothetical mitochondrial protein AtMg00710... 52 8e-06
Y091_NPVOP (O10341) Hypothetical 29.3 kDa protein (ORF92) 51 1e-05
>POLX_TOBAC (P10978) Retrovirus-related Pol polyprotein from
transposon TNT 1-94 [Contains: Protease (EC 3.4.23.-);
Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Length = 1328
Score = 513 bits (1320), Expect = e-144
Identities = 349/1005 (34%), Positives = 493/1005 (48%), Gaps = 65/1005 (6%)
Query: 45 LTLKNVLHSPQLIKNLVSVRKFTTDNSVSVEFDPFGFSVKDFQTGMRLMRCESRGDLYPI 104
L LK+V H P L NL+S D S + K + + + +RG LY
Sbjct: 348 LVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRLTKG---SLVIAKGVARGTLYR- 403
Query: 105 TTSQAISPSTFAA---LAPSLWHARLGHPGAPVVDSLRKNKFIECNRASGSHICHSCSLG 161
T ++ AA ++ LWH R+GH + L K I + + C C G
Sbjct: 404 TNAEICQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFG 463
Query: 162 KHIKLPFVSSNSCTIMPFDIIHSDIW-TSPVLSSSGHRYYVLFVDDYSNFLWTFPLSKKS 220
K ++ F +S+ + D+++SD+ + S G++Y+V F+DD S LW + L K
Sbjct: 464 KQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKD 523
Query: 221 QVFSIFLSFRTFIRTQFEREVKNIQCDNGKEFDNRHFWEFCKENGVAFRLSCPHTSSQNG 280
QVF +F F + + R++K ++ DNG E+ +R F E+C +G+ + P T NG
Sbjct: 524 QVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNG 583
Query: 281 KAERKIRTINNIIRTLLVHASLPPSFWHHALQMATYLINILPNKQLAYQSPLKILYQKEP 340
AER RTI +R++L A LP SFW A+Q A YLIN P+ LA++ P ++ KE
Sbjct: 584 VAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEV 643
Query: 341 SYSHLRVFGCLCYPLFPSTTINKLQARSTPCVFLGYPSNHRSYKCYDLSSRKIIISRHVI 400
SYSHL+VFGC + P KL +S PC+F+GY Y+ +D +K+I SR V+
Sbjct: 644 SYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVV 703
Query: 401 FDETQFPFA-----KLHN---PQPYTYGFMDDGPSPYV-----IHHLTSQPS--LGQPAQ 445
F E++ A K+ N P T + P+ + QP + Q Q
Sbjct: 704 FRESEVRTAADMSEKVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQ 763
Query: 446 HDLPNTQPTTQPTTPEEQHAHSPPSSSPNPSPSTTATPSPPYQPTPISVPKPVTRSQHGI 505
D + PT EEQH P S P + PS Y
Sbjct: 764 LD-EGVEEVEHPTQGEEQH--QPLRRSERPRVESRRYPSTEY------------------ 802
Query: 506 FKPKRQLNLNTSVPRSPLPRNPVSALRDPNWKM-AMDDEFNALIKNKTWELVPRPPDVNV 564
+ S R P V + + N M AM +E +L KN T++LV P
Sbjct: 803 --------VLISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRP 854
Query: 565 IRSMWIFTHKEKSDGVFERYKARLVGDGKTQQVGVDCGETFSPVVKPATIRTVLSLALSK 624
++ W+F K+ D RYKARLV G Q+ G+D E FSPVVK +IRT+LSLA S
Sbjct: 855 LKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASL 914
Query: 625 AWSIHQLDVKNAFLHGELKETVYMHQPMGFRDPNLPNHVCLLKKSLYGLKQAPRAWYKRF 684
+ QLDVK AFLHG+L+E +YM QP GF + VC L KSLYGLKQAPR WY +F
Sbjct: 915 DLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKF 974
Query: 685 ADYVSTIGFSHSTSDHSLFIYR-KGTAMAYILLYVDDIILTASSDALRVTIISLLSTEFA 743
++ + + + SD ++ R +LLYVDD+++ L + LS F
Sbjct: 975 DSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFD 1034
Query: 744 MKDLGSLHYFLGIAVTHH--TGGLFLSQRKYAAEIIERAGMAACKSSSTPVDTKPKLSAN 801
MKDLG LG+ + + L+LSQ KY ++ER M K STP+ KLS
Sbjct: 1035 MKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKK 1094
Query: 802 SSAPHADPS------HYRSLAGALQY-LTFTRPDIAYAVQQVCLFMHDPREEHMHALKRI 854
+ Y S G+L Y + TRPDIA+AV V F+ +P +EH A+K I
Sbjct: 1095 MCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWI 1154
Query: 855 VRYIQGTLDHGLHLYPSSTSTLISYTDADWGGCPDTRRSTSGYCVFLGDNLISWSAKRQA 914
+RY++GT L + S L YTDAD G D R+S++GY ISW +K Q
Sbjct: 1155 LRYLRGTTGDCL-CFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQK 1213
Query: 915 TLSRSSAEAEYRGVANVVSESCWLRNLLLELHCPIRKASLVYCDNVSAIYLSGNPVQHQR 974
++ S+ EAEY E WL+ L EL +K +VYCD+ SAI LS N + H R
Sbjct: 1214 CVALSTTEAEYIAATETGKEMIWLKRFLQELGLH-QKEYVVYCDSQSAIDLSKNSMYHAR 1272
Query: 975 TKHIEMDIHSVREKVARGEVRVLHVPSRYQIADIFTKGLPLVLFE 1019
TKHI++ H +RE V ++VL + + AD+ TK +P FE
Sbjct: 1273 TKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFE 1317
>COPI_DROME (P04146) Copia protein (Gag-int-pol protein) [Contains:
Copia VLP protein; Copia protease (EC 3.4.23.-)]
Length = 1409
Score = 320 bits (821), Expect = 1e-86
Identities = 185/508 (36%), Positives = 283/508 (55%), Gaps = 11/508 (2%)
Query: 535 NWKMAMDDEFNALIKNKTWELVPRPPDVNVIRSMWIFTHKEKSDGVFERYKARLVGDGKT 594
+W+ A++ E NA N TW + RP + N++ S W+F+ K G RYKARLV G T
Sbjct: 905 SWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFT 964
Query: 595 QQVGVDCGETFSPVVKPATIRTVLSLALSKAWSIHQLDVKNAFLHGELKETVYMHQPMGF 654
Q+ +D ETF+PV + ++ R +LSL + +HQ+DVK AFL+G LKE +YM P G
Sbjct: 965 QKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGI 1024
Query: 655 RDPNLPNHVCLLKKSLYGLKQAPRAWYKRFADYVSTIGFSHSTSDHSLFIYRKG--TAMA 712
+ ++VC L K++YGLKQA R W++ F + F +S+ D ++I KG
Sbjct: 1025 SCNS--DNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENI 1082
Query: 713 YILLYVDDIILTASSDALRVTIIS-LLSTEFAMKDLGSLHYFLGIAVTHHTGGLFLSQRK 771
Y+LLYVDD+++ A+ D R+ L +F M DL + +F+GI + ++LSQ
Sbjct: 1083 YVLLYVDDVVI-ATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSA 1141
Query: 772 YAAEIIERAGMAACKSSSTPVDTKPKLSANSSAPHADPSHYRSLAGALQYLTF-TRPDIA 830
Y +I+ + M C + STP+ +K +S + + RSL G L Y+ TRPD+
Sbjct: 1142 YVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCN-TPCRSLIGCLMYIMLCTRPDLT 1200
Query: 831 YAVQQVCLFMHDPREEHMHALKRIVRYIQGTLDHGLHLYPSST--STLISYTDADWGGCP 888
AV + + E LKR++RY++GT+D L + + +I Y D+DW G
Sbjct: 1201 TAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSE 1260
Query: 889 DTRRSTSGYCVFLGD-NLISWSAKRQATLSRSSAEAEYRGVANVVSESCWLRNLLLELHC 947
R+ST+GY + D NLI W+ KRQ +++ SS EAEY + V E+ WL+ LL ++
Sbjct: 1261 IDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINI 1320
Query: 948 PIRKASLVYCDNVSAIYLSGNPVQHQRTKHIEMDIHSVREKVARGEVRVLHVPSRYQIAD 1007
+ +Y DN I ++ NP H+R KHI++ H RE+V + + ++P+ Q+AD
Sbjct: 1321 KLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLAD 1380
Query: 1008 IFTKGLPLVLFEDFRNNLSVRQPPVSTA 1035
IFTK LP F + R+ L + Q S A
Sbjct: 1381 IFTKPLPAARFVELRDKLGLLQDDQSNA 1408
Score = 184 bits (468), Expect = 8e-46
Identities = 118/371 (31%), Positives = 194/371 (51%), Gaps = 18/371 (4%)
Query: 45 LTLKNVLHSPQLIKNLVSVRKFTTDNSVSVEFDPFGFSVKDFQTGMRLMRCESRGDLYPI 104
+TL++VL + NL+SV++ + +S+EFD G ++ + G+ +++ + P+
Sbjct: 343 ITLEDVLFCKEAAGNLMSVKRLQ-EAGMSIEFDKSGVTIS--KNGLMVVKNSGMLNNVPV 399
Query: 105 TTSQAISPSTFAALAPSLWHARLGH-PGAPVVDSLRKNKFIEC----NRASGSHICHSCS 159
QA S + LWH R GH +++ RKN F + N IC C
Sbjct: 400 INFQAYSINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCEICEPCL 459
Query: 160 LGKHIKLPFVSSNSCTIM--PFDIIHSDIWTSPV--LSSSGHRYYVLFVDDYSNFLWTFP 215
GK +LPF T + P ++HSD+ P+ ++ Y+V+FVD ++++ T+
Sbjct: 460 NGKQARLPFKQLKDKTHIKRPLFVVHSDV-CGPITPVTLDDKNYFVIFVDQFTHYCVTYL 518
Query: 216 LSKKSQVFSIFLSFRTFIRTQFEREVKNIQCDNGKEFDNRHFWEFCKENGVAFRLSCPHT 275
+ KS VFS+F F F +V + DNG+E+ + +FC + G+++ L+ PHT
Sbjct: 519 IKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHT 578
Query: 276 SSQNGKAERKIRTINNIIRTLLVHASLPPSFWHHALQMATYLINILPNKQL--AYQSPLK 333
NG +ER IRTI RT++ A L SFW A+ ATYLIN +P++ L + ++P +
Sbjct: 579 PQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYE 638
Query: 334 ILYQKEPSYSHLRVFGCLCYPLFPSTTINKLQARSTPCVFLGYPSNHRSYKCYDLSSRKI 393
+ + K+P HLRVFG Y + K +S +F+GY N +K +D + K
Sbjct: 639 MWHNKKPYLKHLRVFGATVY-VHIKNKQGKFDDKSFKSIFVGYEPN--GFKLWDAVNEKF 695
Query: 394 IISRHVIFDET 404
I++R V+ DET
Sbjct: 696 IVARDVVVDET 706
>M810_ARATH (P92519) Hypothetical mitochondrial protein AtMg00810
(ORF240b)
Length = 240
Score = 250 bits (638), Expect = 2e-65
Identities = 123/225 (54%), Positives = 159/225 (70%), Gaps = 1/225 (0%)
Query: 713 YILLYVDDIILTASSDALRVTIISLLSTEFAMKDLGSLHYFLGIAVTHHTGGLFLSQRKY 772
Y+LLYVDDI+LT SS+ L +I LS+ F+MKDLG +HYFLGI + H GLFLSQ KY
Sbjct: 2 YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKY 61
Query: 773 AAEIIERAGMAACKSSSTPVDTKPKLSANSSAPHADPSHYRSLAGALQYLTFTRPDIAYA 832
A +I+ AGM CK STP+ K S S+A + DPS +RS+ GALQYLT TRPDI+YA
Sbjct: 62 AEQILNNAGMLDCKPMSTPLPLKLNSSV-STAKYPDPSDFRSIVGALQYLTLTRPDISYA 120
Query: 833 VQQVCLFMHDPREEHMHALKRIVRYIQGTLDHGLHLYPSSTSTLISYTDADWGGCPDTRR 892
V VC MH+P LKR++RY++GT+ HGL+++ +S + ++ D+DW GC TRR
Sbjct: 121 VNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRR 180
Query: 893 STSGYCVFLGDNLISWSAKRQATLSRSSAEAEYRGVANVVSESCW 937
ST+G+C FLG N+ISWSAKRQ T+SRSS E EYR +A +E W
Sbjct: 181 STTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>YCH4_YEAST (P25600) Transposon Ty5-1 34.5 kDa hypothetical protein
Length = 308
Score = 160 bits (405), Expect = 2e-38
Identities = 98/307 (31%), Positives = 153/307 (48%), Gaps = 3/307 (0%)
Query: 631 LDVKNAFLHGELKETVYMHQPMGFRDPNLPNHVCLLKKSLYGLKQAPRAWYKRFADYVST 690
+DV AFL+ + E +Y+ QP GF + P++V L +YGLKQAP W + + +
Sbjct: 1 MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60
Query: 691 IGFSHSTSDHSLFIYRKGTAMAYILLYVDDIILTASSDALRVTIISLLSTEFAMKDLGSL 750
IGF +H L+ YI +YVDD+++ A S + + L+ ++MKDLG +
Sbjct: 61 IGFCRHEGEHGLYFRSTSDGPIYIGVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120
Query: 751 HYFLGIAVTHHTGG-LFLSQRKYAAEIIERAGMAACKSSSTPVDTKPKLSANSSAPHADP 809
FLG+ + T G + LS + Y A+ + + K + TP+ L +S D
Sbjct: 121 DKFLGLNIHQSTNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDI 180
Query: 810 SHYRSLAGALQYLTFT-RPDIAYAVQQVCLFMHDPREEHMHALKRIVRYIQGTLDHGLHL 868
+ Y+S+ G L + T RPDI+Y V + F+ +PR H+ + +R++RY+ T L
Sbjct: 181 TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKY 240
Query: 869 YPSSTSTLISYTDADWGGCPDTRRSTSGYCVFLGDNLISWSAKR-QATLSRSSAEAEYRG 927
S L Y DA G D ST GY L ++WS+K+ + + S EAEY
Sbjct: 241 RSGSQVALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAEYIT 300
Query: 928 VANVVSE 934
+ V E
Sbjct: 301 ASETVME 307
>YJL3_YEAST (P47024) Transposon Ty4 207.7 kDa hypothetical protein
Length = 1803
Score = 122 bits (306), Expect = 5e-27
Identities = 122/502 (24%), Positives = 226/502 (44%), Gaps = 46/502 (9%)
Query: 560 PDVNVIRSMWIFTHKEKSDGVFERYKARLVGDGKTQQVGVDCGETFSPVVKPAT----IR 615
PD ++ + IFT +K +G+ YKAR+V G TQ +T+S + + I+
Sbjct: 1318 PDNLIVPTNTIFT--KKRNGI---YKARIVCRGDTQSP-----DTYSVITTESLNHNHIK 1367
Query: 616 TVLSLALSKAWSIHQLDVKNAFLHGELKETVYMHQPMGFRDPNLPNHVCLLKKSLYGLKQ 675
L +A ++ + LD+ +AFL+ +L+E +Y+ P R V L K+LYGLKQ
Sbjct: 1368 IFLMIANNRNMFMKTLDINHAFLYAKLEEEIYIPHPHDRRC------VVKLNKALYGLKQ 1421
Query: 676 APRAWYKRFADYVSTIGFSHSTSDHSLFIYRKGTAMAYILLYVDDIILTASSDALRVTII 735
+P+ W Y++ IG ++ L+ M I +YVDD ++ AS++ I
Sbjct: 1422 SPKEWNDHLRQYLNGIGLKDNSYTPGLYQTEDKNLM--IAVYVDDCVIAASNEQRLDEFI 1479
Query: 736 SLLSTEFAMKDLGSL------HYFLGIAVTHHT--GGLFLSQRKYAAEIIERAG--MAAC 785
+ L + F +K G+L LG+ + ++ G + L+ + + + ++ +
Sbjct: 1480 NKLKSNFELKITGTLIDDVLDTDILGMDLVYNKRLGTIDLTLKSFINRMDKKYNEELKKI 1539
Query: 786 KSSSTPVDTKPKLSANSSAPHADPSHYRS-------LAGALQYLTFT-RPDIAYAVQQVC 837
+ SS P + K+ +R L G L Y+ R DI +AV++V
Sbjct: 1540 RKSSIPHMSTYKIDPKKDVLQMSEEEFRQGVLKLQQLLGELNYVRHKCRYDIEFAVKKVA 1599
Query: 838 LFMHDPREEHMHALKRIVRYIQGTLDHGLHLYP--SSTSTLISYTDADWGGCPDTRRSTS 895
++ P E + + +I++Y+ D G+H + +I+ TDA G D + S
Sbjct: 1600 RLVNYPHERVFYMIYKIIQYLVRYKDIGIHYDRDCNKDKKVIAITDASVGSEYDAQ-SRI 1658
Query: 896 GYCVFLGDNLISWSAKRQATLSRSSAEAEYRGVANVVSESCWLRNLLLELHCPIRKASLV 955
G ++ G N+ + + + SS EAE + ++S L+ L EL ++
Sbjct: 1659 GVILWYGMNIFNVYSNKSTNRCVSSTEAELHAIYEGYADSETLKVTLKELGEGDNNDIVM 1718
Query: 956 YCDNVSAIYLSGNPVQHQRTKHIEMDIHSVREKVARGEVRVLHVPSRYQIADIFTKGLPL 1015
D+ AI Q + K + ++EK+ +++L + + IAD+ TK
Sbjct: 1719 ITDSKPAIQGLNRSYQQPKEKFTWIKTEIIKEKIKEKSIKLLKITGKGNIADLLTKP--- 1775
Query: 1016 VLFEDFRNNLSVRQPPVSTAGV 1037
V DF+ + V + +++ +
Sbjct: 1776 VSASDFKRFIQVLKNKITSQDI 1797
Score = 84.3 bits (207), Expect = 2e-15
Identities = 81/291 (27%), Positives = 129/291 (43%), Gaps = 26/291 (8%)
Query: 124 HARLGHPGAPVVD-SLRKNKF---IECNRASGSHICHSCSLGKHIKLPF----VSSNSCT 175
H R+GH G ++ S++ N + ++ + C +C + K K ++++S
Sbjct: 562 HKRMGHTGIQQIENSIKHNHYEESLDLIKEPNEFWCQTCKISKATKRNHYTGSMNNHSTD 621
Query: 176 IMPFDIIHSDIWTSPVLSSSGH--RYYVLFVDDYSNFLWTFPLSKKSQVFSIFLSFRT-- 231
P DI+ PV SS+ RY ++ VD+ + + T K+ +I R
Sbjct: 622 HEPGSSWCMDIF-GPVSSSNADTKRYMLIMVDNNTRYCMTSTHFNKNAE-TILAQVRKNI 679
Query: 232 -FIRTQFEREVKNIQCDNGKEFDNRHFWEFCKENGVAFRLSCPHTSSQNGKAERKIRTIN 290
++ TQF+R+V+ I D G EF N E+ G+ L+ + NG+AER IRTI
Sbjct: 680 QYVETQFDRKVREINSDRGTEFTNDQIEEYFISKGIHHILTSTQDHAANGRAERYIRTII 739
Query: 291 NIIRTLLVHASLPPSFWHHALQMATYLINILPNKQLAYQSPLKILYQKEPSYSHLRVFGC 350
TLL ++L FW +A+ AT + N L +K + PLK + ++P L F
Sbjct: 740 TDATTLLRQSNLRVKFWEYAVTSATNIRNYLEHKSTG-KLPLKAI-SRQPVTVRLMSF-- 795
Query: 351 LCYPLFPSTTI-----NKLQARSTPCVFLGYPSNHRSYKCYDLSSRKIIIS 396
P I KL+ P + L N YK + S KI+ S
Sbjct: 796 --LPFGEKGIIWNHNHKKLKPSGLPSIILCKDPNSYGYKFFIPSKNKIVTS 844
>YMU0_YEAST (Q04670) Transposon Ty1 protein B
Length = 1328
Score = 120 bits (302), Expect = 1e-26
Identities = 136/524 (25%), Positives = 226/524 (42%), Gaps = 64/524 (12%)
Query: 539 AMDDEFNALIKNKTW---------ELVPRPPDVNVIRSMWIFTHKEKSDGVFERYKARLV 589
A E N L+K KTW E+ P+ VI SM+IF K DG +KAR V
Sbjct: 826 AYHKEVNQLLKMKTWDTDRYYDRKEIDPK----RVINSMFIFNRKR--DGT---HKARFV 876
Query: 590 GDGKTQQVGVDCGETFSPVVKPATIR-----TVLSLALSKAWSIHQLDVKNAFLHGELKE 644
G Q +T+ P ++ T+ T LSLAL + I QLD+ +A+L+ ++KE
Sbjct: 877 ARGDIQHP-----DTYDPGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKE 931
Query: 645 TVYMHQP--MGFRDPNLPNHVCLLKKSLYGLKQAPRAWYKRFADY-VSTIGFSHSTSDHS 701
+Y+ P +G D + LKKSLYGLKQ+ WY+ Y + G
Sbjct: 932 ELYIRPPPHLGMND-----KLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSC 986
Query: 702 LFIYRKGTAMAYILLYVDDIILTASSDALRVTIISLLSTEFAMK--DLG----SLHY-FL 754
+F + I L+VDD+IL + II+ L ++ K +LG + Y L
Sbjct: 987 VF----KNSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDIL 1042
Query: 755 GIAVTHHTGG-LFLSQRKYAAEIIERAGMAA-CKSSSTPVDTKPKLSANSSAPHADPSHY 812
G+ + + G + L E I + + K +P L + + Y
Sbjct: 1043 GLEIKYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQQELELEEDDY 1102
Query: 813 R-------SLAGALQYLTFT-RPDIAYAVQQVCLFMHDPREEHMHALKRIVRYIQGTLDH 864
+ L G Y+ + R D+ Y + + + P ++ + ++++I T D
Sbjct: 1103 KMKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDK 1162
Query: 865 GLHLYPSS----TSTLISYTDADWGGCPDTRRSTSGYCVFLGDNLISWSAKRQATLSRSS 920
L + S T+ L+ +DA +G P +S G L +I + + + S+
Sbjct: 1163 QLIWHKSKPVKPTNKLVVISDASYGNQP-YYKSQIGNIYLLNGKVIGGKSTKASLTCTST 1221
Query: 921 AEAEYRGVANVVSESCWLRNLLLELH-CPIRKASLVYCDNVSAIYLSGNPVQHQRTKHIE 979
EAE ++ V L +L+ EL+ PI K L + +I +S N + R +
Sbjct: 1222 TEAEIHAISESVPLLNNLSHLVQELNKKPITKGLLTDSKSTISIIISNNE-EKFRNRFFG 1280
Query: 980 MDIHSVREKVARGEVRVLHVPSRYQIADIFTKGLPLVLFEDFRN 1023
+R++V+ + V ++ ++ IAD+ TK LP+ F+ N
Sbjct: 1281 TKAMRLRDEVSGNHLHVCYIETKKNIADVMTKPLPIKTFKLLTN 1324
Score = 99.0 bits (245), Expect = 6e-20
Identities = 85/331 (25%), Positives = 135/331 (40%), Gaps = 35/331 (10%)
Query: 20 IIVGNGHSIPIRGYSHTNLSFPNPPLTLKNVLHSPQLIKNLVSVRKFTTDNSVSVEFDPF 79
++ +IPI F + T VLH+P + +L+S+ + + + F
Sbjct: 59 VVDAQKRNIPINAIGDLQFHFQDNTKTSIKVLHTPNIAYDLLSLNELAAVDITAC----F 114
Query: 80 GFSVKDFQTGMRLMRCESRGDLY--------------PITTSQAISPSTFAALAPSLWHA 125
+V + G L GD Y P + S ST P + H
Sbjct: 115 TKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNISVPTINNVHTSESTRKYPYPFI-HR 173
Query: 126 RLGHPGAPVVDSLRKNKFIECNRASG-------SHICHSCSLGKHIKLPFVSSNSCTIM- 177
L H A + KN I S + C C +GK K + +
Sbjct: 174 MLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSRLKYQN 233
Query: 178 ---PFDIIHSDIWTSPV--LSSSGHRYYVLFVDDYSNFLWTFPLS--KKSQVFSIFLSFR 230
PF +H+DI+ PV L S Y++ F D+ + F W +PL ++ + +F +
Sbjct: 234 SYEPFQYLHTDIF-GPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTIL 292
Query: 231 TFIRTQFEREVKNIQCDNGKEFDNRHFWEFCKENGVAFRLSCPHTSSQNGKAERKIRTIN 290
FI+ QF+ V IQ D G E+ NR +F ++NG+ + S +G AER RT+
Sbjct: 293 AFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLL 352
Query: 291 NIIRTLLVHASLPPSFWHHALQMATYLINIL 321
+ RT L + LP W A++ +T + N L
Sbjct: 353 DDCRTQLQCSGLPNHLWFSAIEFSTIVRNSL 383
>YMT5_YEAST (Q04214) Transposon Ty1 protein B
Length = 1328
Score = 118 bits (295), Expect = 9e-26
Identities = 134/519 (25%), Positives = 219/519 (41%), Gaps = 54/519 (10%)
Query: 539 AMDDEFNALIKNKTW---------ELVPRPPDVNVIRSMWIFTHKEKSDGVFERYKARLV 589
A E N L+K KTW E+ P+ VI SM+IF K DG +KAR V
Sbjct: 826 AYHKEVNQLLKMKTWDTDKYYDRKEIDPK----RVINSMFIFNRKR--DGT---HKARFV 876
Query: 590 GDGKTQQVGVDCGETFSPVVKPATIRTVLSLALSKAWSIHQLDVKNAFLHGELKETVYMH 649
G Q S V + T LSLAL + I QLD+ +A+L+ ++KE +Y+
Sbjct: 877 ARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIR 936
Query: 650 QP--MGFRDPNLPNHVCLLKKSLYGLKQAPRAWYKRFADY-VSTIGFSHSTSDHSLFIYR 706
P +G D + LKKSLYGLKQ+ WY+ Y + G +F
Sbjct: 937 PPPHLGMND-----KLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVF--- 988
Query: 707 KGTAMAYILLYVDDIILTASSDALRVTIISLLSTEFAMK--DLG----SLHY-FLGIAVT 759
+ I L+VDD++L + + II L ++ K +LG + Y LG+ +
Sbjct: 989 -ENSQVTICLFVDDMVLFSKNLNSNKRIIDKLKMQYDTKIINLGESDEEIQYDILGLEIK 1047
Query: 760 HHTGG-LFLSQRKYAAEIIERAGMAA-CKSSSTPVDTKPKLSANSSAPHADPSHYR---- 813
+ G + L E I + + K +P L + + Y+
Sbjct: 1048 YQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQQELELEEDDYKMKVH 1107
Query: 814 ---SLAGALQYLTFT-RPDIAYAVQQVCLFMHDPREEHMHALKRIVRYIQGTLDHGLHLY 869
L G Y+ + R D+ Y + + + P ++ + ++++I T D L +
Sbjct: 1108 EMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQLIWH 1167
Query: 870 PSS----TSTLISYTDADWGGCPDTRRSTSGYCVFLGDNLISWSAKRQATLSRSSAEAEY 925
S T+ L+ +DA +G P +S G L +I + + + S+ EAE
Sbjct: 1168 KSKPVKPTNKLVVISDASYGNQP-YYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEI 1226
Query: 926 RGVANVVSESCWLRNLLLEL-HCPIRKASLVYCDNVSAIYLSGNPVQHQRTKHIEMDIHS 984
++ V L L+ EL PI K L + +I +S N + R +
Sbjct: 1227 HAISESVPLLNNLSYLIQELDKKPITKGLLTDSKSTISIIISNNE-EKFRNRFFGTKAMR 1285
Query: 985 VREKVARGEVRVLHVPSRYQIADIFTKGLPLVLFEDFRN 1023
+R++V+ + V ++ ++ IAD+ TK LP+ F+ N
Sbjct: 1286 LRDEVSGNHLHVCYIETKKNIADVMTKPLPIKTFKLLTN 1324
Score = 99.0 bits (245), Expect = 6e-20
Identities = 85/331 (25%), Positives = 135/331 (40%), Gaps = 35/331 (10%)
Query: 20 IIVGNGHSIPIRGYSHTNLSFPNPPLTLKNVLHSPQLIKNLVSVRKFTTDNSVSVEFDPF 79
++ +IPI F + T VLH+P + +L+S+ + + + F
Sbjct: 59 VVDAQKRNIPINAIGDLQFHFQDNTKTSIKVLHTPNIAYDLLSLNELAAVDITAC----F 114
Query: 80 GFSVKDFQTGMRLMRCESRGDLY--------------PITTSQAISPSTFAALAPSLWHA 125
+V + G L GD Y P + S ST P + H
Sbjct: 115 TKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNISVPTINNVHTSESTRKYPYPFI-HR 173
Query: 126 RLGHPGAPVVDSLRKNKFIECNRASG-------SHICHSCSLGKHIKLPFVSSNSCTIM- 177
L H A + KN I S + C C +GK K + +
Sbjct: 174 MLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSRLKYQN 233
Query: 178 ---PFDIIHSDIWTSPV--LSSSGHRYYVLFVDDYSNFLWTFPLS--KKSQVFSIFLSFR 230
PF +H+DI+ PV L S Y++ F D+ + F W +PL ++ + +F +
Sbjct: 234 SYEPFQYLHTDIF-GPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTIL 292
Query: 231 TFIRTQFEREVKNIQCDNGKEFDNRHFWEFCKENGVAFRLSCPHTSSQNGKAERKIRTIN 290
FI+ QF+ V IQ D G E+ NR +F ++NG+ + S +G AER RT+
Sbjct: 293 AFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLL 352
Query: 291 NIIRTLLVHASLPPSFWHHALQMATYLINIL 321
+ RT L + LP W A++ +T + N L
Sbjct: 353 DDCRTQLQCSGLPNHLWFSAIEFSTIVRNSL 383
>YJZ9_YEAST (P47100) Transposon Ty1 protein B
Length = 1755
Score = 118 bits (295), Expect = 9e-26
Identities = 134/519 (25%), Positives = 220/519 (41%), Gaps = 54/519 (10%)
Query: 539 AMDDEFNALIKNKTW---------ELVPRPPDVNVIRSMWIFTHKEKSDGVFERYKARLV 589
A E N L+K KTW E+ P+ VI SM+IF +K DG +KAR V
Sbjct: 1253 AYHKEVNQLLKMKTWDTDEYYDRKEIDPK----RVINSMFIFN--KKRDGT---HKARFV 1303
Query: 590 GDGKTQQVGVDCGETFSPVVKPATIRTVLSLALSKAWSIHQLDVKNAFLHGELKETVYMH 649
G Q S V + T LSLAL + I QLD+ +A+L+ ++KE +Y+
Sbjct: 1304 ARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIR 1363
Query: 650 QP--MGFRDPNLPNHVCLLKKSLYGLKQAPRAWYKRFADY-VSTIGFSHSTSDHSLFIYR 706
P +G D + LKKSLYGLKQ+ WY+ Y + G +F
Sbjct: 1364 PPPHLGMND-----KLIRLKKSLYGLKQSGANWYETIKSYLIQQCGMEEVRGWSCVF--- 1415
Query: 707 KGTAMAYILLYVDDIILTASSDALRVTIISLLSTEFAMK--DLG----SLHY-FLGIAVT 759
+ I L+VDD++L + + II L ++ K +LG + Y LG+ +
Sbjct: 1416 -KNSQVTICLFVDDMVLFSKNLNSNKRIIEKLKMQYDTKIINLGESDEEIQYDILGLEIK 1474
Query: 760 HHTGG-LFLSQRKYAAEIIERAGMAA-CKSSSTPVDTKPKLSANSSAPHADPSHYR---- 813
+ G + L E I + + K +P L + + Y+
Sbjct: 1475 YQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQQELELEEDDYKMKVH 1534
Query: 814 ---SLAGALQYLTFT-RPDIAYAVQQVCLFMHDPREEHMHALKRIVRYIQGTLDHGLHLY 869
L G Y+ + R D+ Y + + + P ++ + ++++I T D L +
Sbjct: 1535 EMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQLIWH 1594
Query: 870 PSS----TSTLISYTDADWGGCPDTRRSTSGYCVFLGDNLISWSAKRQATLSRSSAEAEY 925
S T+ L+ +DA +G P +S G L +I + + + S+ EAE
Sbjct: 1595 KSKPVKPTNKLVVISDASYGNQP-YYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEI 1653
Query: 926 RGVANVVSESCWLRNLLLEL-HCPIRKASLVYCDNVSAIYLSGNPVQHQRTKHIEMDIHS 984
++ V L L+ EL PI K L + +I +S N + R +
Sbjct: 1654 HAISESVPLLNNLSYLIQELDKKPITKGLLTDSKSTISIIISNNE-EKFRNRFFGTKAMR 1712
Query: 985 VREKVARGEVRVLHVPSRYQIADIFTKGLPLVLFEDFRN 1023
+R++V+ + V ++ ++ IAD+ TK LP+ F+ N
Sbjct: 1713 LRDEVSGNHLHVCYIETKKNIADVMTKPLPIKTFKLLTN 1751
Score = 99.0 bits (245), Expect = 6e-20
Identities = 85/331 (25%), Positives = 135/331 (40%), Gaps = 35/331 (10%)
Query: 20 IIVGNGHSIPIRGYSHTNLSFPNPPLTLKNVLHSPQLIKNLVSVRKFTTDNSVSVEFDPF 79
++ +IPI F + T VLH+P + +L+S+ + + + F
Sbjct: 486 VVDAQKRNIPINAIGDLQFHFQDNTKTSIKVLHTPNIAYDLLSLNELAAVDITAC----F 541
Query: 80 GFSVKDFQTGMRLMRCESRGDLY--------------PITTSQAISPSTFAALAPSLWHA 125
+V + G L GD Y P + S ST P + H
Sbjct: 542 TKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNISVPTINNVHTSESTRKYPYPFI-HR 600
Query: 126 RLGHPGAPVVDSLRKNKFIECNRASG-------SHICHSCSLGKHIKLPFVSSNSCTIM- 177
L H A + KN I S + C C +GK K + +
Sbjct: 601 MLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSRLKYQN 660
Query: 178 ---PFDIIHSDIWTSPV--LSSSGHRYYVLFVDDYSNFLWTFPLS--KKSQVFSIFLSFR 230
PF +H+DI+ PV L S Y++ F D+ + F W +PL ++ + +F +
Sbjct: 661 SYEPFQYLHTDIF-GPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTIL 719
Query: 231 TFIRTQFEREVKNIQCDNGKEFDNRHFWEFCKENGVAFRLSCPHTSSQNGKAERKIRTIN 290
FI+ QF+ V IQ D G E+ NR +F ++NG+ + S +G AER RT+
Sbjct: 720 AFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLL 779
Query: 291 NIIRTLLVHASLPPSFWHHALQMATYLINIL 321
+ RT L + LP W A++ +T + N L
Sbjct: 780 DDCRTQLQCSGLPNHLWFSAIEFSTIVRNSL 810
>YME4_YEAST (Q04711) Transposon Ty1 protein B
Length = 1328
Score = 116 bits (291), Expect = 3e-25
Identities = 132/519 (25%), Positives = 219/519 (41%), Gaps = 54/519 (10%)
Query: 539 AMDDEFNALIKNKTW---------ELVPRPPDVNVIRSMWIFTHKEKSDGVFERYKARLV 589
A E N L+K TW E+ P+ VI SM+IF K DG +KAR V
Sbjct: 826 AYHKEVNQLLKMNTWDTDKYYDRKEIDPK----RVINSMFIFNRKR--DGT---HKARFV 876
Query: 590 GDGKTQQVGVDCGETFSPVVKPATIRTVLSLALSKAWSIHQLDVKNAFLHGELKETVYMH 649
G Q S V + T LSLAL + I QLD+ +A+L+ ++KE +Y+
Sbjct: 877 ARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIR 936
Query: 650 QP--MGFRDPNLPNHVCLLKKSLYGLKQAPRAWYKRFADY-VSTIGFSHSTSDHSLFIYR 706
P +G D + LKKSLYGLKQ+ WY+ Y + G +F
Sbjct: 937 PPPHLGMND-----KLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVF--- 988
Query: 707 KGTAMAYILLYVDDIILTASSDALRVTIISLLSTEFAMK--DLG----SLHY-FLGIAVT 759
+ I L+VDD+IL + II+ L ++ K +LG + Y LG+ +
Sbjct: 989 -KNSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIK 1047
Query: 760 HHTGG-LFLSQRKYAAEIIERAGMAA-CKSSSTPVDTKPKLSANSSAPHADPSHYR---- 813
+ G + L E I + + K +P L + D Y+
Sbjct: 1048 YQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYKEKVH 1107
Query: 814 ---SLAGALQYLTFT-RPDIAYAVQQVCLFMHDPREEHMHALKRIVRYIQGTLDHGLHLY 869
L G Y+ + R D+ Y + + + P + + +++++ T D L +
Sbjct: 1108 EMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWH 1167
Query: 870 PSS----TSTLISYTDADWGGCPDTRRSTSGYCVFLGDNLISWSAKRQATLSRSSAEAEY 925
+ + L++ +DA +G P +S G L +I + + + S+ EAE
Sbjct: 1168 KNKPTEPDNKLVAISDASYGNQP-YYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEI 1226
Query: 926 RGVANVVSESCWLRNLLLELH-CPIRKASLVYCDNVSAIYLSGNPVQHQRTKHIEMDIHS 984
++ V L +L+ EL+ PI K L + +I +S N + R +
Sbjct: 1227 HAISESVPLLNNLSHLVQELNKKPITKGLLTDSKSTISIIISNNE-EKFRNRFFGTKAMR 1285
Query: 985 VREKVARGEVRVLHVPSRYQIADIFTKGLPLVLFEDFRN 1023
+R++V+ + V ++ ++ IAD+ TK LP+ F+ N
Sbjct: 1286 LRDEVSGNHLHVCYIETKKNIADVMTKPLPIKTFKLLTN 1324
Score = 99.0 bits (245), Expect = 6e-20
Identities = 85/331 (25%), Positives = 135/331 (40%), Gaps = 35/331 (10%)
Query: 20 IIVGNGHSIPIRGYSHTNLSFPNPPLTLKNVLHSPQLIKNLVSVRKFTTDNSVSVEFDPF 79
++ +IPI F + T VLH+P + +L+S+ + + + F
Sbjct: 59 VVDAQKRNIPINAIGDLQFHFQDNTKTSIKVLHTPNIAYDLLSLNELAAVDITAC----F 114
Query: 80 GFSVKDFQTGMRLMRCESRGDLY--------------PITTSQAISPSTFAALAPSLWHA 125
+V + G L GD Y P + S ST P + H
Sbjct: 115 TKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNISVPTINNVHTSESTRKYPYPFI-HR 173
Query: 126 RLGHPGAPVVDSLRKNKFIECNRASG-------SHICHSCSLGKHIKLPFVSSNSCTIM- 177
L H A + KN I S + C C +GK K + +
Sbjct: 174 MLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSRLKYQN 233
Query: 178 ---PFDIIHSDIWTSPV--LSSSGHRYYVLFVDDYSNFLWTFPLS--KKSQVFSIFLSFR 230
PF +H+DI+ PV L S Y++ F D+ + F W +PL ++ + +F +
Sbjct: 234 SYEPFQYLHTDIF-GPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTIL 292
Query: 231 TFIRTQFEREVKNIQCDNGKEFDNRHFWEFCKENGVAFRLSCPHTSSQNGKAERKIRTIN 290
FI+ QF+ V IQ D G E+ NR +F ++NG+ + S +G AER RT+
Sbjct: 293 AFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLL 352
Query: 291 NIIRTLLVHASLPPSFWHHALQMATYLINIL 321
+ RT L + LP W A++ +T + N L
Sbjct: 353 DDCRTQLQCSGLPNHLWFSAIEFSTIVRNSL 383
>YMD9_YEAST (Q03434) Transposon Ty1 protein B
Length = 1328
Score = 113 bits (283), Expect = 2e-24
Identities = 133/519 (25%), Positives = 219/519 (41%), Gaps = 54/519 (10%)
Query: 539 AMDDEFNALIKNKTW---------ELVPRPPDVNVIRSMWIFTHKEKSDGVFERYKARLV 589
A E N L+K KTW E+ P+ VI SM+IF +K DG +KAR V
Sbjct: 826 AYHKEVNQLLKMKTWDTDEYYDRKEIDPK----RVINSMFIFN--KKRDGT---HKARFV 876
Query: 590 GDGKTQQVGVDCGETFSPVVKPATIRTVLSLALSKAWSIHQLDVKNAFLHGELKETVYMH 649
G Q S V + T LSLAL + I QLD+ +A+L+ ++KE +Y+
Sbjct: 877 ARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIR 936
Query: 650 QP--MGFRDPNLPNHVCLLKKSLYGLKQAPRAWYKRFADY-VSTIGFSHSTSDHSLFIYR 706
P +G D + LKKSLYGLKQ+ WY+ Y + G +F
Sbjct: 937 PPPHLGMND-----KLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVF--- 988
Query: 707 KGTAMAYILLYVDDIILTASSDALRVTIISLLSTEFAMK--DLG----SLHY-FLGIAVT 759
+ I L+VDD+IL + II+ L ++ K +LG + Y LG+ +
Sbjct: 989 -KNSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIK 1047
Query: 760 HHTGG-LFLSQRKYAAEIIERAGMAA-CKSSSTPVDTKPKLSANSSAPHADPSHYR---- 813
+ G + L E I + + K +P L + D Y+
Sbjct: 1048 YQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYKEKVH 1107
Query: 814 ---SLAGALQYLTFT-RPDIAYAVQQVCLFMHDPREEHMHALKRIVRYIQGTLDHGLHLY 869
L G Y+ + R D+ Y + + + P + + +++++ T D L +
Sbjct: 1108 EMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWH 1167
Query: 870 PSS----TSTLISYTDADWGGCPDTRRSTSGYCVFLGDNLISWSAKRQATLSRSSAEAEY 925
+ + L++ +DA +G P +S G L +I + + + S+ EAE
Sbjct: 1168 KNKPTEPDNKLVAISDASYGNQP-YYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEI 1226
Query: 926 RGVANVVSESCWLRNLLLELH-CPIRKASLVYCDNVSAIYLSGNPVQHQRTKHIEMDIHS 984
++ V L L+ EL+ PI K L + +I S N + R +
Sbjct: 1227 HAISESVPLLNNLSYLIQELNKKPIIKGLLTDSRSTISIIKSTNE-EKFRNRFFGTKAMR 1285
Query: 985 VREKVARGEVRVLHVPSRYQIADIFTKGLPLVLFEDFRN 1023
+R++V+ + V ++ ++ IAD+ TK LP+ F+ N
Sbjct: 1286 LRDEVSGNNLYVYYIETKKNIADVMTKPLPIKTFKLLTN 1324
Score = 100 bits (250), Expect = 2e-20
Identities = 86/331 (25%), Positives = 139/331 (41%), Gaps = 35/331 (10%)
Query: 20 IIVGNGHSIPIRGYSHTNLSFPNPPLTLKNVLHSPQLIKNLVSVRKFTTDNSVSVEFDPF 79
++ +IPI F + T VLH+P + +L+S+ + + + F
Sbjct: 59 VVDAQKRNIPINAIGDLQFHFQDNTKTSIKVLHTPNIAYDLLSLNELAAVDITAC----F 114
Query: 80 GFSVKDFQTGMRLMRCESRGDLY--------------PITTSQAISPSTFAALAPSLWHA 125
+V + G L GD Y P + S ST P + H
Sbjct: 115 TKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNISVPTINNVHTSESTRKYPYPFI-HR 173
Query: 126 RLGHPGAPVVDSLRKNKFI------ECNRASG-SHICHSCSLGKHIKLPFVSSNSCTIM- 177
L H A + KN I + +R+S + C C +GK K + +
Sbjct: 174 MLAHANAQTIRYSLKNNTITYFNESDVDRSSAIDYQCPDCLIGKSTKHRHIKGSRLKYQN 233
Query: 178 ---PFDIIHSDIWTSPV--LSSSGHRYYVLFVDDYSNFLWTFPLS--KKSQVFSIFLSFR 230
PF +H+DI+ PV L S Y++ F D+ + F W +PL ++ + +F +
Sbjct: 234 SYEPFQYLHTDIF-GPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTIL 292
Query: 231 TFIRTQFEREVKNIQCDNGKEFDNRHFWEFCKENGVAFRLSCPHTSSQNGKAERKIRTIN 290
FI+ QF+ V IQ D G E+ NR +F ++NG+ + S +G AER RT+
Sbjct: 293 AFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLL 352
Query: 291 NIIRTLLVHASLPPSFWHHALQMATYLINIL 321
+ RT L + LP W A++ +T + N L
Sbjct: 353 DDCRTQLQCSGLPNHLWFSAIEFSTIVRNSL 383
>M820_ARATH (P92520) Hypothetical mitochondrial protein AtMg00820
(ORF170)
Length = 170
Score = 110 bits (276), Expect = 2e-23
Identities = 58/126 (46%), Positives = 83/126 (65%), Gaps = 4/126 (3%)
Query: 498 VTRSQHGIFK--PKRQLNLNTSVPRSPLPRNPVSALRDPNWKMAMDDEFNALIKNKTWEL 555
+TRS+ GI K PK L + T++ + P ++ + AL+DP W AM +E +AL +NKTW L
Sbjct: 2 LTRSKAGINKLNPKYSLTITTTIKKEP--KSVIFALKDPGWCQAMQEELDALSRNKTWIL 59
Query: 556 VPRPPDVNVIRSMWIFTHKEKSDGVFERYKARLVGDGKTQQVGVDCGETFSPVVKPATIR 615
VP P + N++ W+F K SDG +R KARLV G Q+ G+ ET+SPVV+ ATIR
Sbjct: 60 VPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIR 119
Query: 616 TVLSLA 621
T+L++A
Sbjct: 120 TILNVA 125
>YJZ7_YEAST (P47098) Transposon Ty1 protein B
Length = 1755
Score = 110 bits (274), Expect = 3e-23
Identities = 132/519 (25%), Positives = 218/519 (41%), Gaps = 54/519 (10%)
Query: 539 AMDDEFNALIKNKTW---------ELVPRPPDVNVIRSMWIFTHKEKSDGVFERYKARLV 589
A E N L+K KTW E+ P+ VI SM+IF +K DG +KAR V
Sbjct: 1253 AYHKEVNQLLKMKTWDTDEYYDRKEIDPK----RVINSMFIFN--KKRDGT---HKARFV 1303
Query: 590 GDGKTQQVGVDCGETFSPVVKPATIRTVLSLALSKAWSIHQLDVKNAFLHGELKETVYMH 649
G Q S V + T LSLAL + I QLD+ +A+L+ ++KE +Y+
Sbjct: 1304 ARGDIQHPDTYDTGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIR 1363
Query: 650 QP--MGFRDPNLPNHVCLLKKSLYGLKQAPRAWYKRFADY-VSTIGFSHSTSDHSLFIYR 706
P +G D + LKKS YGLKQ+ WY+ Y + G +F
Sbjct: 1364 PPPHLGMND-----KLIRLKKSHYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVF--- 1415
Query: 707 KGTAMAYILLYVDDIILTASSDALRVTIISLLSTEFAMK--DLG----SLHY-FLGIAVT 759
+ I L+VDD+IL + II+ L ++ K +LG + Y LG+ +
Sbjct: 1416 -KNSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIK 1474
Query: 760 HHTGG-LFLSQRKYAAEIIERAGMAA-CKSSSTPVDTKPKLSANSSAPHADPSHYR---- 813
+ G + L E I + + K +P L + D Y+
Sbjct: 1475 YQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYKEKVH 1534
Query: 814 ---SLAGALQYLTFT-RPDIAYAVQQVCLFMHDPREEHMHALKRIVRYIQGTLDHGLHLY 869
L G Y+ + R D+ Y + + + P + + +++++ T D L +
Sbjct: 1535 EMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWH 1594
Query: 870 PSS----TSTLISYTDADWGGCPDTRRSTSGYCVFLGDNLISWSAKRQATLSRSSAEAEY 925
+ + L++ +DA +G P +S G L +I + + + S+ EAE
Sbjct: 1595 KNKPTEPDNKLVAISDASYGNQP-YYKSQIGNIFLLNGKVIGGKSTKASLTCTSTTEAEI 1653
Query: 926 RGVANVVSESCWLRNLLLELH-CPIRKASLVYCDNVSAIYLSGNPVQHQRTKHIEMDIHS 984
++ V L L+ EL+ PI K L + +I S N + R +
Sbjct: 1654 HAISESVPLLNNLSYLIQELNKKPIIKGLLTDSRSTISIIKSTNE-EKFRNRFFGTKAMR 1712
Query: 985 VREKVARGEVRVLHVPSRYQIADIFTKGLPLVLFEDFRN 1023
+R++V+ + V ++ ++ IAD+ TK LP+ F+ N
Sbjct: 1713 LRDEVSGNNLYVYYIETKKNIADVMTKPLPIKTFKLLTN 1751
Score = 99.0 bits (245), Expect = 6e-20
Identities = 85/331 (25%), Positives = 135/331 (40%), Gaps = 35/331 (10%)
Query: 20 IIVGNGHSIPIRGYSHTNLSFPNPPLTLKNVLHSPQLIKNLVSVRKFTTDNSVSVEFDPF 79
++ +IPI F + T VLH+P + +L+S+ + + + F
Sbjct: 486 VVDAQKRNIPINAIGDLQFHFQDNTKTSIKVLHTPNIAYDLLSLNELAAVDITAC----F 541
Query: 80 GFSVKDFQTGMRLMRCESRGDLY--------------PITTSQAISPSTFAALAPSLWHA 125
+V + G L GD Y P + S ST P + H
Sbjct: 542 TKNVLERSDGTVLAPIVQYGDFYWVSKRYLLPSNISVPTINNVHTSESTRKYPYPFI-HR 600
Query: 126 RLGHPGAPVVDSLRKNKFIECNRASG-------SHICHSCSLGKHIKLPFVSSNSCTIM- 177
L H A + KN I S + C C +GK K + +
Sbjct: 601 MLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSRLKYQN 660
Query: 178 ---PFDIIHSDIWTSPV--LSSSGHRYYVLFVDDYSNFLWTFPLS--KKSQVFSIFLSFR 230
PF +H+DI+ PV L S Y++ F D+ + F W +PL ++ + +F +
Sbjct: 661 SYEPFQYLHTDIF-GPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTIL 719
Query: 231 TFIRTQFEREVKNIQCDNGKEFDNRHFWEFCKENGVAFRLSCPHTSSQNGKAERKIRTIN 290
FI+ QF+ V IQ D G E+ NR +F ++NG+ + S +G AER RT+
Sbjct: 720 AFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLL 779
Query: 291 NIIRTLLVHASLPPSFWHHALQMATYLINIL 321
+ RT L + LP W A++ +T + N L
Sbjct: 780 DDCRTQLQCSGLPNHLWFSAIEFSTIVRNSL 810
>YCB9_YEAST (P25384) Transposon Ty2 protein B (Ty1-17 protein B)
Length = 1770
Score = 108 bits (270), Expect = 7e-23
Identities = 92/332 (27%), Positives = 142/332 (42%), Gaps = 37/332 (11%)
Query: 20 IIVGNGHSIPIRGYSHTNLSFPNPPLTLKNVLHSPQLIKNLVSVRKFTTDNSVSVEFDPF 79
I+ IPI + + +F N T LH+P + +L+S+ + N + F
Sbjct: 482 IVDAQKQDIPINAIGNLHFNFQNGTKTSIKALHTPNIAYDLLSLSELANQNITAC----F 537
Query: 80 GFSVKDFQTGMRLMRCESRGDLYPITTSQAISPSTFAALAPS--------------LWHA 125
+ + G L GD Y ++ I PS + L + L H
Sbjct: 538 TRNTLERSDGTVLAPIVKHGDFYWLSKKYLI-PSHISKLTINNVNKSKSVNKYPYPLIHR 596
Query: 126 RLGHPG-APVVDSLRKNKF-------IECNRASGSHICHSCSLGKHIKLPFVSSNSCTIM 177
LGH + SL+KN IE + AS ++ C C +GK K V +
Sbjct: 597 MLGHANFRSIQKSLKKNAVTYLKESDIEWSNAS-TYQCPDCLIGKSTKHRHVKGSRLKYQ 655
Query: 178 ----PFDIIHSDIWTSPV--LSSSGHRYYVLFVDDYSNFLWTFPLS--KKSQVFSIFLSF 229
PF +H+DI+ PV L S Y++ F D+ + F W +PL ++ + ++F S
Sbjct: 656 ESYEPFQYLHTDIF-GPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSI 714
Query: 230 RTFIRTQFEREVKNIQCDNGKEFDNRHFWEFCKENGVAFRLSCPHTSSQNGKAERKIRTI 289
FI+ QF V IQ D G E+ N+ +F G+ + S +G AER RT+
Sbjct: 715 LAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTL 774
Query: 290 NNIIRTLLVHASLPPSFWHHALQMATYLINIL 321
N RTLL + LP W A++ +T + N L
Sbjct: 775 LNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSL 806
Score = 108 bits (269), Expect = 1e-22
Identities = 131/522 (25%), Positives = 222/522 (42%), Gaps = 60/522 (11%)
Query: 539 AMDDEFNALIKNKTWELVPRPPDVN------VIRSMWIFTHKEKSDGVFERYKARLVGDG 592
A E + L+K TW+ + D N VI SM+IF +K DG +KAR V G
Sbjct: 1268 AYHKEISQLLKMNTWD-TNKYYDRNDIDPKKVINSMFIFN--KKRDGT---HKARFVARG 1321
Query: 593 KTQQVGVDCGETFSPVVKPATIRTVLSLALSKAWSIHQLDVKNAFLHGELKETVYMHQP- 651
Q + S V + T LS+AL + I QLD+ +A+L+ ++KE +Y+ P
Sbjct: 1322 DIQHPDTYDSDMQSNTVHHYALMTSLSIALDNDYYITQLDISSAYLYADIKEELYIRPPP 1381
Query: 652 -MGFRDPNLPNHVCLLKKSLYGLKQAPRAWYKRFADYVSTIGFSHSTSDHSLFIYRKGTA 710
+G D L L+KSLYGLKQ+ WY+ Y+ S +
Sbjct: 1382 HLGLNDKLL-----RLRKSLYGLKQSGANWYETIKSYLINCCDMQEVRGWSCVF---KNS 1433
Query: 711 MAYILLYVDDIILTASSDALRVTIISLLSTEFAMK--DLG----SLHY-FLGIAVTHHTG 763
I L+VDD+IL + II+ L ++ K +LG + Y LG+ + +
Sbjct: 1434 QVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKY--- 1490
Query: 764 GLFLSQRKYAAEIIERAGMAACKSSSTPVDTK-PKLSANSSAPH--------ADPSHYR- 813
+ KY +E++ + P++ K KL A H D Y+
Sbjct: 1491 ----QRSKYMKLGMEKSLTEKLPKLNVPLNPKGKKLRAPGQPGHYIDQDELEIDEDEYKE 1546
Query: 814 ------SLAGALQYLTFT-RPDIAYAVQQVCLFMHDPREEHMHALKRIVRYIQGTLDHGL 866
L G Y+ + R D+ Y + + + P + + +++++ T D L
Sbjct: 1547 KVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQL 1606
Query: 867 HLYPSS----TSTLISYTDADWGGCPDTRRSTSGYCVFLGDNLISWSAKRQATLSRSSAE 922
+ + + L++ +DA +G P +S G L +I + + + S+ E
Sbjct: 1607 IWHKNKPTKPDNKLVAISDASYGNQP-YYKSQIGNIFLLNGKVIGGKSTKASLTCTSTTE 1665
Query: 923 AEYRGVANVVSESCWLRNLLLELH-CPIRKASLVYCDNVSAIYLSGNPVQHQRTKHIEMD 981
AE V+ + L +L+ EL+ PI K L + +I S N + R +
Sbjct: 1666 AEIHAVSEAIPLLNNLSHLVQELNKKPIIKGLLTDSRSTISIIKSTNE-EKFRNRFFGTK 1724
Query: 982 IHSVREKVARGEVRVLHVPSRYQIADIFTKGLPLVLFEDFRN 1023
+R++V+ + V ++ ++ IAD+ TK LP+ F+ N
Sbjct: 1725 AMRLRDEVSGNNLYVYYIETKKNIADVMTKPLPIKTFKLLTN 1766
>M240_ARATH (P93290) Hypothetical mitochondrial protein AtMg00240
(ORF111a)
Length = 111
Score = 76.3 bits (186), Expect = 4e-13
Identities = 32/78 (41%), Positives = 49/78 (62%)
Query: 821 YLTFTRPDIAYAVQQVCLFMHDPREEHMHALKRIVRYIQGTLDHGLHLYPSSTSTLISYT 880
YLT TRPD+ +AV ++ F R M A+ +++ Y++GT+ GL +S L ++
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61
Query: 881 DADWGGCPDTRRSTSGYC 898
D+DW CPDTRRS +G+C
Sbjct: 62 DSDWASCPDTRRSVTGFC 79
>POL_SFV1 (P23074) Pol polyprotein [Contains: Protease (EC 3.4.23.-);
Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC
3.1.26.4) (RT); Integrase (IN)]
Length = 1161
Score = 58.2 bits (139), Expect = 1e-07
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 10/145 (6%)
Query: 176 IMPFDIIHSDIWTSPVLSSSGHRYYVLFVDDYSNFLWTFPLSKKSQVFSI-FLSFRTFIR 234
+ PFD + D + P+ S+G+ + ++ VD + F+W +P S ++ L+ T I
Sbjct: 881 LKPFDKFYID-YIGPLPPSNGYLHVLVVVDSMTGFVWLYPTKAPSTSATVKALNMLTSIA 939
Query: 235 TQFEREVKNIQCDNGKEFDNRHFWEFCKENGVAFRLSCPHTSSQNGKAERKIRTINNIIR 294
K + D G F + F ++ KE G+ S P+ +GK ERK I ++
Sbjct: 940 IP-----KVLHSDQGAAFTSSTFADWAKEKGIQLEFSTPYHPQSSGKVERKNSDIKRLLT 994
Query: 295 TLLVHASLPPSFWHHALQMATYLIN 319
LL+ P+ W+ L + +N
Sbjct: 995 KLLIGR---PAKWYDLLPVVQLALN 1016
>POL_FOAMV (P14350) Pol polyprotein [Contains: Reverse
transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4)
(RT); Integrase (IN)]
Length = 886
Score = 57.4 bits (137), Expect = 2e-07
Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 11/160 (6%)
Query: 178 PFDIIHSDIWTSPVLSSSGHRYYVLFVDDYSNFLWTFPLSKKSQVFSI-FLSFRTFIRTQ 236
PFD D + P+ S G+ Y ++ VD + F W +P S ++ L+ T I
Sbjct: 675 PFDKFFID-YIGPLPPSQGYLYVLVVVDGMTGFTWLYPTKAPSTSATVKSLNVLTSIAIP 733
Query: 237 FEREVKNIQCDNGKEFDNRHFWEFCKENGVAFRLSCPHTSSQNGKAERKIRTINNIIRTL 296
K I D G F + F E+ KE G+ S P+ K ERK I ++ L
Sbjct: 734 -----KVIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSGSKVERKNSDIKRLLTKL 788
Query: 297 LVHASLPPSFWHHALQMATYLINILPNKQLAYQSPLKILY 336
LV P+ W+ L + +N + L Y +P ++L+
Sbjct: 789 LVGR---PTKWYDLLPVVQLALNNTYSPVLKY-TPHQLLF 824
>POL_SFV3L (P27401) Pol polyprotein [Contains: Protease (EC 3.4.23.-);
Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC
3.1.26.4) (RT); Integrase (IN)]
Length = 1157
Score = 57.0 bits (136), Expect = 3e-07
Identities = 39/145 (26%), Positives = 65/145 (43%), Gaps = 10/145 (6%)
Query: 176 IMPFDIIHSDIWTSPVLSSSGHRYYVLFVDDYSNFLWTFPLSKKSQVFSI-FLSFRTFIR 234
+ PFD D + P+ S+G+ + ++ VD + F+W +P S ++ L+ T I
Sbjct: 883 VKPFDKFFID-YIGPLPPSNGYLHVLVVVDSMTGFVWLYPTKAPSTSATVKALNMLTSIA 941
Query: 235 TQFEREVKNIQCDNGKEFDNRHFWEFCKENGVAFRLSCPHTSSQNGKAERKIRTINNIIR 294
K I D G F + F ++ K G+ S P+ +GK ERK I ++
Sbjct: 942 VP-----KVIHSDQGAAFTSATFADWAKNKGIQLEFSTPYHPQSSGKVERKNSDIKRLLT 996
Query: 295 TLLVHASLPPSFWHHALQMATYLIN 319
LLV P+ W+ L + +N
Sbjct: 997 KLLVGR---PAKWYDLLPVVQLALN 1018
>M300_ARATH (P93293) Hypothetical mitochondrial protein AtMg00300
(ORF145a) (ORF1451)
Length = 145
Score = 54.7 bits (130), Expect = 1e-06
Identities = 29/102 (28%), Positives = 46/102 (44%), Gaps = 3/102 (2%)
Query: 92 LMRCESRGDLYPITTSQAISPSTFAALAPS---LWHARLGHPGAPVVDSLRKNKFIECNR 148
+++ LY + S S A A LWH+RL H ++ L K F++ ++
Sbjct: 38 ILKGNRHDSLYILQGSVETGESNLAETAKDETRLWHSRLAHMSQRGMELLVKKGFLDSSK 97
Query: 149 ASGSHICHSCSLGKHIKLPFVSSNSCTIMPFDIIHSDIWTSP 190
S C C GK ++ F + T P D +HSD+W +P
Sbjct: 98 VSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWGAP 139
>M710_ARATH (P92512) Hypothetical mitochondrial protein AtMg00710
(ORF120)
Length = 120
Score = 52.0 bits (123), Expect = 8e-06
Identities = 24/67 (35%), Positives = 39/67 (57%)
Query: 287 RTINNIIRTLLVHASLPPSFWHHALQMATYLINILPNKQLAYQSPLKILYQKEPSYSHLR 346
RTI +R++L LP +F A A ++IN P+ + + P ++ +Q P+YS+LR
Sbjct: 3 RTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYLR 62
Query: 347 VFGCLCY 353
FGC+ Y
Sbjct: 63 RFGCVAY 69
>Y091_NPVOP (O10341) Hypothetical 29.3 kDa protein (ORF92)
Length = 279
Score = 51.2 bits (121), Expect = 1e-05
Identities = 42/124 (33%), Positives = 49/124 (38%), Gaps = 16/124 (12%)
Query: 426 PSPYVIHHLTSQPSLGQPAQHDLPNTQPTTQPT---TPEEQHAHSP-----PSSSPNPSP 477
P+P + T P+L P P PT PT TP SP P+ SP P+P
Sbjct: 73 PTPALSPTPTPSPTLS-PTPSPTPTPSPTPSPTPSPTPTPSPTPSPTPTPSPTPSPTPTP 131
Query: 478 STTATPSPPYQPTPISVPKP-------VTRSQHGIFKPKRQLNLNTSVPRSPLPRNPVSA 530
S T TPSP PTP P P T S P + + P SP P S
Sbjct: 132 SPTPTPSPTPSPTPSPTPTPSPTPSPTPTPSPTPSPTPTPSPTPSPTPPPSPTPPPSPSP 191
Query: 531 LRDP 534
L DP
Sbjct: 192 LGDP 195
Score = 44.3 bits (103), Expect = 0.002
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 433 HLTSQPSLGQPAQHDLPNTQPTTQPT-----TPEEQHAHSP-PSSSPNPSPSTTATPSPP 486
++ ++P L P P+ PT P+ TP +P PS +P P+ S T TPSP
Sbjct: 27 NIETKPPLPSPTPTPTPSPTPTPTPSPTPTPTPTPTPTPTPTPSPTPTPALSPTPTPSPT 86
Query: 487 YQPTPISVPKP 497
PTP P P
Sbjct: 87 LSPTPSPTPTP 97
Score = 43.1 bits (100), Expect = 0.004
Identities = 24/59 (40%), Positives = 29/59 (48%), Gaps = 4/59 (6%)
Query: 443 PAQHDLPNTQPTTQPT-TPEEQHAHSP---PSSSPNPSPSTTATPSPPYQPTPISVPKP 497
P P+ PT PT TP SP P+ SP P+PS T +P+P PTP P P
Sbjct: 45 PTPTPTPSPTPTPTPTPTPTPTPTPSPTPTPALSPTPTPSPTLSPTPSPTPTPSPTPSP 103
Score = 42.7 bits (99), Expect = 0.005
Identities = 30/76 (39%), Positives = 35/76 (45%), Gaps = 7/76 (9%)
Query: 426 PSPYVIHHLTSQPSLGQPAQHDLPNTQPTTQPT-TPEEQHAHSP---PSSSPNPSPSTTA 481
P+P T PS P P PT PT +P A SP PS + +P+PS T
Sbjct: 39 PTPTPSPTPTPTPS---PTPTPTPTPTPTPTPTPSPTPTPALSPTPTPSPTLSPTPSPTP 95
Query: 482 TPSPPYQPTPISVPKP 497
TPSP PTP P P
Sbjct: 96 TPSPTPSPTPSPTPTP 111
Score = 41.2 bits (95), Expect = 0.015
Identities = 24/72 (33%), Positives = 29/72 (39%), Gaps = 3/72 (4%)
Query: 426 PSPYVIHHLTSQPSLGQPAQHDLPNTQPTTQPTTPEEQHAHSPPSSSPNPSPSTTATPSP 485
PSP T P+ P P P PT PS +P PSP+ + TPSP
Sbjct: 51 PSPTPTPTPTPTPT---PTPTPSPTPTPALSPTPTPSPTLSPTPSPTPTPSPTPSPTPSP 107
Query: 486 PYQPTPISVPKP 497
P+P P P
Sbjct: 108 TPTPSPTPSPTP 119
Score = 40.8 bits (94), Expect = 0.019
Identities = 24/72 (33%), Positives = 31/72 (42%), Gaps = 11/72 (15%)
Query: 426 PSPYVIHHLTSQPSLGQPAQHDLPNTQPTTQPTTPEEQHAHSPPSSSPNPSPSTTATPSP 485
P+P T P+L P P PT PT P+ SP PSP+ + TP+P
Sbjct: 63 PTPTPTPSPTPTPALS-PTPTPSPTLSPTPSPT----------PTPSPTPSPTPSPTPTP 111
Query: 486 PYQPTPISVPKP 497
P+P P P
Sbjct: 112 SPTPSPTPTPSP 123
Score = 40.4 bits (93), Expect = 0.025
Identities = 27/76 (35%), Positives = 35/76 (45%), Gaps = 7/76 (9%)
Query: 426 PSPYVIHHLTSQPSLGQPAQHDLPNTQPTTQPTTPEEQHAHSP---PSSSPNPSPSTTAT 482
PSP T PS P P+ PT PT P SP P+ +P+P+PS T
Sbjct: 125 PSPTPTPSPTPTPS---PTPSPTPSPTPTPSPT-PSPTPTPSPTPSPTPTPSPTPSPTPP 180
Query: 483 PSPPYQPTPISVPKPV 498
PSP P+P + P+
Sbjct: 181 PSPTPPPSPSPLGDPM 196
Score = 40.4 bits (93), Expect = 0.025
Identities = 21/59 (35%), Positives = 27/59 (45%)
Query: 439 SLGQPAQHDLPNTQPTTQPTTPEEQHAHSPPSSSPNPSPSTTATPSPPYQPTPISVPKP 497
SL Q + P PT PT P+ +P P+P+ T TP+P PTP P P
Sbjct: 23 SLKQNIETKPPLPSPTPTPTPSPTPTPTPSPTPTPTPTPTPTPTPTPSPTPTPALSPTP 81
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.320 0.135 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 128,699,094
Number of Sequences: 164201
Number of extensions: 5859609
Number of successful extensions: 31814
Number of sequences better than 10.0: 587
Number of HSP's better than 10.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 441
Number of HSP's that attempted gapping in prelim test: 24096
Number of HSP's gapped (non-prelim): 3507
length of query: 1038
length of database: 59,974,054
effective HSP length: 120
effective length of query: 918
effective length of database: 40,269,934
effective search space: 36967799412
effective search space used: 36967799412
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 71 (32.0 bits)
Medicago: description of AC146632.4